ID:

dps_1344

 Coordinate:

4_group1:302569-302719 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.6 -11.1 -10.8 -10.7

Flybase annnotation

exon [dpse_GLEANR_16839:2]; CDS [Dpse\GA21874-cds]; intron [Dpse\GA21874-in]

Repeatable elements

NameClassFamilyStrand
(ATG)nSimple_repeatSimple_repeat+
mature
star
  1. dps_2649  XL_group1e:3062426-3062444 +
  2. XL_group1e:7788017-7788035 +
  3. XR_group3a:653186-653204 +
  4. 4_group5:1323756-1323774 +
  5. 4_group5:1539727-1539745 +
  6. XL_group3b:179577-179595 +
  7. 3:3518486-3518504 +
  8. 3:11089244-11089262 +
  9. 3:13101658-13101676 +
  10. 2:16011555-16011573 +
  11. XL_group3a:853544-853562 +
  12. XR_group8:190909-190927 +
  13. XR_group8:4226460-4226478 +
  14. dps_1344  4_group1:302646-302664 +
  15. 4_group1:813913-813931 +
  16. 4_group1:2247884-2247902 +
  17. 4_group4:1199698-1199716 +
  18. XR_group6:4511412-4511430 +
  19. XR_group6:12385539-12385557 +
  20. XL_group1a:7940367-7940385 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCCATGCGCCACCTTCTTACACACACACACACACACACACCGCACACTCATAAATTTACACAAATTTATGGAATTTGTGCGTGACACAACACTGGCTCTGGCCTTTGGCTCTTGGTTCTCTAGGATGATGATGATGATGATGATATTCTAAAAATATCTCCACTAATATCTCCAATTGTTCTTCCTATTGGTATTTGCAGATTACAAAGGAGGAACTGGCCAAATTGATTAGCGGCTTCGACCAGCAGGA
**********************************************************************......(((.(((..((((.((((((..((((((...))))...))....)))).....)).)).))...))))))********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 V112
male body		 M062
head
 GSM444067
head
..........................................................................................................................................................................................................................GGCCAAATTGATTAGCGG............... 18 0 1 6.00 6 6 0 0 0 0 0
.........................................................................................................................................................................................................ATTACAAAGGAGGAACTGGC.............................. 20 0 1 3.00 3 2 0 0 1 0 0
..........................................................................................................................................................................................................TTACAAAGGAGGAACTGGC.............................. 19 0 1 2.00 2 2 0 0 0 0 0
.......................................................................................................................................................................................................AGATTACAAAGGAGGAACT................................. 19 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................................................................................................TTGAGATTACAAAGGAGGAACTGGCC............................. 26 2 1 2.00 2 2 0 0 0 0 0
.....................................................................................................................................................................................................TGAGATTACAAAGGAGGAACTGGC.............................. 24 2 1 2.00 2 1 0 1 0 0 0
................................................................................................................................................................................................................................ATTGATTAGCGGCTTCGACCAGCA... 24 0 1 2.00 2 2 0 0 0 0 0
.............................................................................................................................................................................................................................CAAATTGATTAGCGGCTTCGACCAGC.... 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................GTGATTACAAAGGAGGAACTGGC.............................. 23 2 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................ACAAAGGAGGAACTGGCC............................. 18 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................................CTTTGAGATTACAAAGGAGGAACTGGC.............................. 27 3 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................................................................................................GAGGAACTGGCCAAATTG....................... 18 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................AGATTACAAAGGAGGAACTGGCCAAATT........................ 28 0 1 1.00 1 0 0 0 1 0 0
.......................................................................................................................................................................................................................ACTGGCCAAATTGATTAGCGGCTT............ 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................CAAATTGATTAGCGGCTTCGACC....... 23 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................AGATTACAAAGGAGGAACTGGC.............................. 22 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TACAAAGGAGGAACTGGCC............................. 19 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................GCCAAATTGATTAGCGGCTTCGACCAGC.... 28 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................TTTGAGATTACAAAGGAGGAACTAGCC............................. 27 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................AAGGAGGAACTGGCCAAA.......................... 18 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................CTGGCCAAATTGATTAGCG................ 19 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................AAAGGAGGAACTGGCCAA........................... 18 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................................CTGGCCAAATTGATTAGCGGC.............. 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................GATTAGCGGCTTCGACCAGCAG.. 22 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................GATTAGCGGCTTCGACCAG..... 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................GATTAGCAGCTTCGACCAGCAG.. 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................................................GCAAAATTGATTAGCGGCTTCGACCAGC.... 28 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................TGAGATTACAAAGGAGGAACTGG............................... 23 2 1 1.00 1 1 0 0 0 0 0
......................................................................GGAATTTGTGCGTGACACAACACTGGCT......................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................GAGATTACAAAGGAGGAACT................................. 20 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................CAAATTGATTAGCGGCTTC........... 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................AGATTACAAAGGAGGAACTGGCC............................. 23 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................................................................TTACAAAGGAGGAACTGGCC............................. 20 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................TGAGATTACAAAGGAGGAACTGGCC............................. 25 2 1 1.00 1 0 0 0 0 1 0
.......................................................................................................................................................................................................................................AGCGGCTTCGACCAGCAG.. 18 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGACCAGC.... 25 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................GGAGGAACTGGCCAAATTGA...................... 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TACAAAGGAGGAACTGGCCAAATTG....................... 25 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGAC........ 21 0 1 1.00 1 0 0 0 1 0 0
............................................................................................................................................................................................................................CCAAATTGATTAGCGGCTTCGACCAGC.... 27 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................AAGGAGGAACTGGCCAAATTG....................... 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGACCAGCA... 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................CAAAGGAGGAACTGGCCAAATTG....................... 23 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................AAGGAGGAACTGGCCAAAT......................... 19 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GGCCAAATTGATTAGCGGCTTCGA......... 24 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................GATTACAAAGGAGGAACTGGCC............................. 22 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GGCCAAATTGATTAGCGGC.............. 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................GATTAGCGGCTTCGACCAGCA... 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................ATTAGCGGCTTCGACCAGC.... 19 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GGCCAAATTGATTAGCGGCTT............ 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................GAATATGTGCGTGAGACA.................................................................................................................................................................. 18 2 4 0.25 1 1 0 0 0 0 0
......................................................................................................................CTCCAGGATGATGATGATGCTGA.............................................................................................................. 23 2 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GGCCAAATTGATAAGCGGT.............. 19 2 4 0.25 1 0 0 0 0 0 1
................................................................................................................................................................................................................................ATTGACTAGCGGCTTTGA......... 18 2 5 0.20 1 0 0 1 0 0 0
...............TCTTACACACACACACACAC........................................................................................................................................................................................................................ 20 0 15 0.07 1 0 1 0 0 0 0
...........................................................................TTGTGCGTGTCACAACAGC............................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1
..........................................................................TTTGTGCGTGACACTACCG.............................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1
..........................................................................CTTGTGCGTGACACAGCACA............................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 1
...............................................................................................................................GATGATGATGATGATGATA......................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................AGGATGAAGATGATGATGATG............................................................................................................ 21 1 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

CCGGTACGCGGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGGCGTGTGAGTATTTAAATGTGTTTAAATACCTTAAACACGCACTGTGTTGTGACCGAGACCGGAAACCGAGAACCAAGAGATCCTACTACTACTACTACTACTATAAGATTTTTATAGAGGTGATTATAGAGGTTAACAAGAAGGATAACCATAAACGTCTAATGTTTCCTCCTTGACCGGTTTAACTAATCGCCGAAGCTGGTCGTCCT
*********************************************************************************************************......(((.(((..((((.((((((..((((((...))))...))....)))).....)).)).))...))))))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body
..................................................................................................................................................AAGATTTATAAAGAGTTGATTAT.................................................................................. 23 3 3 0.33 1 1 0
..........................................................................................................................................................TATTAAGGTGATGATAGAGGT............................................................................ 21 3 5 0.20 1 0 1
......................................................................................................................................................TTTTTATTAAGGTGATGATAG................................................................................ 21 3 9 0.11 1 1 0
.......................................................................................................................................................TTTTATTAAGGTGATGATAG................................................................................ 20 3 20 0.05 1 1 0
...........TGGAAGAAAGTGTGTGCGC............................................................................................................................................................................................................................. 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group1:302519-302769 + dps_1344 GGCCATGCG-CC--------A----------------CCTTCTTACACACACACACACACACACACCGC-ACACTCATAAATTTACACAAATTTATGGA-ATTTGTGCGTGACAC---AACACTGGCTCT-----------GGCCTTTGG-CTCTTGGTTCTCTAGGATGATGATGATGATG---ATGATATTCTAAA----------------------------------------------------------AATATCTCCACTAATAT----------CTCC-AATTG---------TTCTTCCTATTGGTA-TTTGCAGATTACAAAGGAGGAACTGGCCAAATTGATTAGCGGCTTCGACCAGCAGGA
droPer2 scaffold_1:297450-297699 + GGCCATGCG-CC--------A----------------CCTTCTTACAC----ACACACACACACACCGC-ACACTCATAAATTTACACAAATTTATGGA-ATTTGTGCGTGACAC---AACACTGGCTCT-----------GGCCTTTGG-CTTTTGGTTCTCTAGGATGATGATGATGATGATGATGATATTCTAAA----------------------------------------------------------AATATCTCCACTAATAT----------CTCC-AATTG---------TTCTTCCTATTGGTA-TTTGCAGATTACAAAGGAGGAACTGGCCAAATTGATTAGCGGCTTCGACCAGCAGGA
droWil2 scf2_1100000004521:7992645-7992909 + GGCCATACGTTCAATGTCCCGTCTGTCCGTCCGTCTGTCTGTCTGTTC----ATTTATCCATCTACTTCTGCTGGCAGAAATTCATAAAAATTTATTGG-ATGCGTGCGTGACTA---AAACTTTGTGTA-----------AATGCTGGGAGGGTTAGCTCTATTGTGTGGGGAAGGGGGAG---AAGAATCGTTTCC----------------------------------------------------------AAAACTTTAACTAA-------------TTTTGCCCTA---------TTC---TTCTC-----TTTTTAGGTCACAAAGGAGGAGTTGGCCAAATTGATAAGCGGTTTCGATCAGCAGGA
droVir3 scaffold_12963:3268298-3268465 - C---------------------------------------------------------------------------ATAAATTTTCTAAAATTTATGGC-ACGTGTGCGTGACCC---AAAGCCGGTTAT-----------AG--------------------------------------------GGTATTCAAAT----------------------------------------------------------GTAATATATATACATATGTCAAAATGATTTTGATTTT---------GTT---TTTGTA--T-ATTGCAGGTTACAAAGGAGGAGCTGGCCAAATTGATCAGCGGCTTTGATCAGCAAGA
droMoj3 scaffold_6500:13629384-13629574 - C---------------------------------------------------------------------------ATAAATTTAG-AATATTTATGGC-ACGTGTGCGTGCCGC---ATGCCT--------------------------------------------------------------------------CTTGTAATGGCATACATATGTATATTTATATTATTTTTTGCTTATACTAATCTGAATTCAAATT-----TAA---------------CC-TTTTG---------TTTTTGTTTTTATTTCTGTGCAGGTCACAAAGGAGGAGCTGGCCAAATTGATAAGCGGCTTTGATCAACAAGA
droGri2 scaffold_15252:2848220-2848275 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGGTTACAAAGGAGGAGCTGGCCAAATTGATTAGCGGATTTGATCAGCAGGA
droAna3 scaffold_12916:11391526-11391647 - ATCC---------------------------------------------------------------------------------CAAAAATTTATTGA-ATTTGTGCGTGACTC---A-----------------------------------------------------------------------------------------------------------------------------------------------TCTGCTAA-------------TTT------ATTTTTATGACTC---TTACT--CT-CTTCCAGGTGACAAAGGAGGAGCTGGCCAAACTGATCAGCGGTTTCGACCAGCAGGA
droBip1 scf7180000396572:1061100-1061231 - CTTAAAGTA-CC--------GA-----------------------------------------------------------CATAC-CGAATTTATTGA-ATTCGTGCGTGACTC---AACCCA------------------------------------------------------------------------------------------------------------------------------------------TCTACTAA-------------TT-------ATATTTATG---C------TC--CT-CTTCCAGGTGACAAAGGAGGAGCTGGCCAAACTGATCAGCGGTTTCGACCAGCAGGA
droKik1 scf7180000302468:35044-35223 - GGCAGAGTA-AG--------A----------------------------------------------------ACTAAGAACGCACCGAAATTTATTGAAATGCGTGCGTGACCCTTAAAAGTCC--AATAAGCCATTCCA---------------------------------------------------------CATGCAATGTC-------------------------------------------------CACCCCCACTAA-------------TCCAAACCCT---------ATC---TTTCCATAT-TTTGCAGGTGACAAAGGAGGAGCTCTCCAAACTGATTAGCGGCTTTGACCAGCAGGA
droFic1 scf7180000453813:64021-64076 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAGGTGACAAAAGATGAGCTCTCCAAACTGATCAGCGGCTTCGACCAGCAGGA
droEle1 scf7180000491024:39532-39587 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATTAGCGGCTTCGACCAGCAGGA
droRho1 scf7180000768899:6267-6322 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGACCAGCAGGA
droBia1 scf7180000301528:8592-8648 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAGCTTTCTAAACTAATCAGCGGATTCGACCAGCAGGA
droTak1 scf7180000414129:28847-28902 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAACTCTCTAAACTAATCAGCGGCTTCGATCAGCAGGA
droEug1 scf7180000409676:606300-606353 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGACCAACAGGA
dm3 chr2L:5976733-5976815 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAA-------------CTCCAAACTT---------TCC---TTACCA--T-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTTGACCAGCAGGA
droSim2 2l:5772395-5772480 - C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAA-------------CTCCAAACTT---------TTC---TTACCATCT-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTTGACCAGCAGGA
droSec2 scaffold_5:4047788-4047873 - C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAA-------------CTCCAAACTT---------TCC---TTACCATCT-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTTGACCAGCAGGA
droYak3 2L:13217584-13217662 + C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAA-------------CTCCAAACTT---------T--------CCA--T-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGATCAGCAGGA
droEre2 scaffold_4929:6067317-6067430 - GATCACGAGACC--------A----------------GCCTATTAC---------------------------------------------------------------TAACT--------------------------------------------------------------------------------------------------------------------------------------------------CCACCACTAA-------------CTCCCAACTT---------TCC---TTACCA--T-CTTGCAGGTGTCAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGACCAGCAGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGCCATGCG-CC--------A----------------CCTTCTTACACACACACACACACACACACCGC-ACACTCATAAATTTACACAAATTTATGGA-ATTTGTGCGTGACAC---AACACTGGCTCT-----------GGCCTTTGG-CTCTTGGTTCTCTAGGATGATGATGATGATG---ATGATATTCTAAA----------------------------------------------------------AATATCTCCACTAATAT----------CTCC-AATTG---------TTCTTCCTATTGGTA-TTTGCAGATTACAAAGGAGGAACTGGCCAAATTGATTAGCGGCTTCGACCAGCAGGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATTAGCGG...............1816.0060600000000
.....................................................................................................................................................................................................................................................................................................................................ATTACAAAGGAGGAACTGGC..............................2013.0030200001000
......................................................................................................................................................................................................................................................................................................................................TTACAAAGGAGGAACTGGC..............................1912.0020200000000
...................................................................................................................................................................................................................................................................................................................................AGATTACAAAGGAGGAACT.................................1912.0020200000000
............................................................................................................................................................................................................................................................................................................................................................ATTGATTAGCGGCTTCGACCAGCA...2412.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................CAAATTGATTAGCGGCTTCGACCAGC....2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................ACAAAGGAGGAACTGGCC.............................1811.0010010000000
..............................................................................................................................................................................................................................................................................................................................................GAGGAACTGGCCAAATTG.......................1811.0010100000000
...................................................................................................................................................................................................................................................................................................................................AGATTACAAAGGAGGAACTGGCCAAATT........................2811.0010000001000
...................................................................................................................................................................................................................................................................................................................................................ACTGGCCAAATTGATTAGCGGCTT............2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................CAAATTGATTAGCGGCTTCGACC.......2311.0010010000000
...................................................................................................................................................................................................................................................................................................................................AGATTACAAAGGAGGAACTGGC..............................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................TACAAAGGAGGAACTGGCC.............................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................GCCAAATTGATTAGCGGCTTCGACCAGC....2811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................AAGGAGGAACTGGCCAAA..........................1811.0010010000000
....................................................................................................................................................................................................................................................................................................................................................CTGGCCAAATTGATTAGCG................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................AAAGGAGGAACTGGCCAA...........................1811.0010000100000
....................................................................................................................................................................................................................................................................................................................................................CTGGCCAAATTGATTAGCGGC..............2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................GATTAGCGGCTTCGACCAGCAG..2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................GATTAGCGGCTTCGACCAG.....1911.0010100000000
................................................................................................GGA-ATTTGTGCGTGACAC---AACACTGGCT.......................................................................................................................................................................................................................................................2811.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................CAAATTGATTAGCGGCTTC...........1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................AGATTACAAAGGAGGAACTGGCC.............................2311.0010000100000
......................................................................................................................................................................................................................................................................................................................................TTACAAAGGAGGAACTGGCC.............................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................AGCGGCTTCGACCAGCAG..1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGACCAGC....2511.0010010000000
.............................................................................................................................................................................................................................................................................................................................................GGAGGAACTGGCCAAATTGA......................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................TACAAAGGAGGAACTGGCCAAATTG.......................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGAC........2111.0010000001000
........................................................................................................................................................................................................................................................................................................................................................CCAAATTGATTAGCGGCTTCGACCAGC....2711.0010100000000
...........................................................................................................................................................................................................................................................................................................................................AAGGAGGAACTGGCCAAATTG.......................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGACCAGCA...2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................CAAAGGAGGAACTGGCCAAATTG.......................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................AAGGAGGAACTGGCCAAAT.........................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATTAGCGGCTTCGA.........2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................GATTACAAAGGAGGAACTGGCC.............................2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATTAGCGGC..............1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................GATTAGCGGCTTCGACCAGCA...2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................ATTAGCGGCTTCGACCAGC....1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATTAGCGGCTT............2111.0010100000000
........................................TCTTACACACACACACACAC...........................................................................................................................................................................................................................................................................................................................20150.0710010000000
.........................................................................................................................................................................GATGATGATGATG---ATGATA........................................................................................................................................................................................19200.0510000100000
droPer2
GGCCATGCG-CC--------A----------------CCTTCTTACAC----ACACACACACACACCGC-ACACTCATAAATTTACACAAATTTATGGA-ATTTGTGCGTGACAC---AACACTGGCTCT-----------GGCCTTTGG-CTTTTGGTTCTCTAGGATGATGATGATGATGATGATGATATTCTAAA----------------------------------------------------------AATATCTCCACTAATAT----------CTCC-AATTG---------TTCTTCCTATTGGTA-TTTGCAGATTACAAAGGAGGAACTGGCCAAATTGATTAGCGGCTTCGACCAGCAGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................ATTGATTAGCGGCTTCGACC.......2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................AATTGATTAGCGGCTTCGACCAGC....2411.001001000
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGACC.......2211.001010000
.....................................................................................................................................................................................................................................................................................................................................ATTACAAAGGAGGAACTGGCC.............................2111.001010000
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATTAGCGGC..............1911.001010000
............................................................................................................................................................................................................................................................................................................................................................ATTGATTAGCGGCTTCGACCAGCAG..2511.001000001
........................................................................................................................................................TTTTGGTTCTCTAGGATGATGATGAT.....................................................................................................................................................................................................2611.001010000
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATTAGCGGCTTCGACCAGCAGG.2811.001010000
droWil2
GGCCATACGTTCAATGTCCCGTCTGTCCGTCCGTCTGTCTGTCTGTTC----ATTTATCCATCTACTTCTGCTGGCAGAAATTCATAAAAATTTATTGG-ATGCGTGCGTGACTA---AAACTTTGTGTA-----------AATGCTGGGAGGGTTAGCTCTATTGTGTGGGGAAGGGGGAG---AAGAATCGTTTCC----------------------------------------------------------AAAACTTTAACTAA-------------TTTTGCCCTA---------TTC---TTCTC-----TTTTTAGGTCACAAAGGAGGAGTTGGCCAAATTGATAAGCGGTTTCGATCAGCAGGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................GTTGGCCAAATTGATAAGCGGT..............2218.00800350
..................................................................................................................................................................................................................................................................................................................................................AGTTGGCCAAATTGATAAGCGGT..............2316.00613200
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATAAGCGGT..............1913.00301110
.....................................................................................................................................................................................................................................................................................................................................GTCACAAAGGAGGAGTTGGCC.............................2113.00300300
.......................................................................................................................................................................................................................................................................................................................................CACAAAGGAGGAGTTGGC..............................1812.00200110
....................................................................................................................................................................................................................................................................................................................................GGTCACAAAGGAGGAGTTGGC..............................2112.00200200
..................................................................................................................................................................................................................................................................................................................................................AGTTGGCCAAATTGATAAGCGGTTTC...........2612.00201010
.........................................................................................................................................................................................................................................................................................................................................................CAAATTGATAAGCGGTTTC...........1911.00100100
.......................................................................................................................................................................................................................................................................................................................................CACAAAGGAGGAGTTGGCCAAAT.........................2311.00100100
...................................................................................................................................................................................................................................................................................................................................................GTTGGCCAAATTGATAAGC.................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................GAGTTGGCCAAATTGATAAGCG................2211.00100100
.................................................................................................................................................................................................................................................................................................................................................GAGTTGGCCAAATTGATAAGCGGT..............2411.00100100
.................................................................................................................................................................................................................................................................................................................................................GAGTTGGCCAAATTGATAAGC.................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................AGGAGTTGGCCAAATTGATA....................2011.00100010
..........................................................................................................................................................................................................................................................................................................................................AAAGGAGGAGTTGGCCAA...........................1811.00100100
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATAAGCGGTTTCGATC.......2211.00100010
................................................................................................................................................................................................................................................................................................................................................GGAGTTGGCCAAATTGATAAGCGGTTTC...........2811.00100100
........................................................................................................................................................................................................................................................................................................................................ACAAAGGAGGAGTTGGCCAAATTG.......................2411.00100100
...................................................................................................................................................................................................................................................................................................................................................GTTGGCCAAATTGATAAGCGGTTTCGA.........2711.00100010
.........................................................................................................................................................................................................................................................................................................................................CAAAGGAGGAGTTGGCCAAATTGATA....................2611.00100100
.........................................................................................................................................................................................................................................................................................................................................................CAAATTGATAAGCGGTTTCGATCAG.....2511.00100010
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATAAGCGGTTTCGA.........2011.00100100
........................................................................................................................................................................................................................................................................................................................................ACAAAGGAGGAGTTGGCC.............................1811.00101000
...................................................................................................................................................................................................................................................................................................................................................GTTGGCCAAATTGATAAGCGG...............2111.00100100
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATAAGCGGTTTCG..........1911.00100010
...................................................................................................................................................................................................................................................................................................................................................GTTGGCCAAATTGATAAGCG................2011.00100100
...........................................................................................................................................................................................................................................................................................................................................................AATTGATAAGCGGTTTCGAT........2011.00100100
.....................................................................................................................................................................................................................................................................................................................................GTCACAAAGGAGGAGTTGGCCAAATTG.......................2711.00100100
..............................................................................................................................................................................................................................................................................................................................................GAGGAGTTGGCCAAATTGATAAGC.................2411.00100100
.....................................................................................................................................................................................................................................................................................................................................................TGGCCAAATTGATAAGCGGT..............2011.00100100
.......................................................................................................................................................................................................................................................................................................................................CACAAAGGAGGAGTTGGCCA............................2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................GCCAAATTGATAAGCGGT..............1811.00100010
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATAAGCGGTTTCGATCA......2711.00100010
.......................................................................................................................................................................................................................................................................................................................................CACAAAGGAGGAGTTGGCC.............................1911.00100100
......................................................................................................................................................................................................................................................................................................................................TCACAAAGGAGGAGTTGGCCAA...........................2211.00101000
...................................................................................................................................................................................................................................................................................................................................................GTTGGCCAAATTGATAAG..................1811.00100010
droVir3
C---------------------------------------------------------------------------ATAAATTTTCTAAAATTTATGGC-ACGTGTGCGTGACCC---AAAGCCGGTTAT-----------AG--------------------------------------------GGTATTCAAAT----------------------------------------------------------GTAATATATATACATATGTCAAAATGATTTTGATTTT---------GTT---TTTGTA--T-ATTGCAGGTTACAAAGGAGGAGCTGGCCAAATTGATCAGCGGCTTTGATCAGCAAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATCAGCGGCTTTGAT........2113.003000000010100000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GGTTACAAAGGAGGAGCTGGCC.............................2213.003000000000000000000000000000002000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATCAGCGGCTTTGATCAGC....2912.002000000000000000000000000000000000000000000000000000000000000002
............................................................................................................................................................................................................................................................................................................................................................ATTGATCAGCGGCTTTGAT........1912.002000000000000000000000000000001000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GGTTACAAAGGAGGAGCTGGC..............................2112.002002000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATCAGCGGCTTT...........1812.002000000020000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TACAAAGGAGGAGCTGGCCAAATTG.......................2511.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGGAGGAGCTGGCCAAATTGATCAGCGGCT.............3011.001000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................CTGGCCAAATTGATCAGCG................1911.001000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GGAGGAGCTGGCCAAATT........................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TGGCCAAATTGATCAGCGGCTTTG..........2411.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TGATCAGCGGCTTTGATCAGCAAG.2411.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAGGAGCTGGCCAAATTGAT.....................2011.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AATTGATCAGCGGCTTTGAT........2011.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCTGGCCAAATTGATCAGCGGCTTTGAT........2811.001000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................................................................................................GGTTACAAAGGAGGAGCT.................................1811.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATCAGCGGCTTTGATCA......2711.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AATTGATCAGCGGCTTTGATC.......2111.001000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CAAATTGATCAGCGGCTTTGAT........2211.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAATTGATCAGCGGCTTTG..........1911.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ATCAGCGGCTTTGATCAG.....1811.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCTTTGATCAGC....2011.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TGATCAGCGGCTTTGATCA......1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AGCGGCTTTGATCAGCAAG.1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CAAATTGATCAGCGGCTTT...........1911.001000000010000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GCCAAATTGATCAGCGGCTTTGAT........2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TGATCAGCGGCTTTGATC.......1811.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TACAAAGGAGGAGCTGGCCAAATTGATC....................2811.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
C---------------------------------------------------------------------------ATAAATTTAG-AATATTTATGGC-ACGTGTGCGTGCCGC---ATGCCT--------------------------------------------------------------------------CTTGTAATGGCATACATATGTATATTTATATTATTTTTTGCTTATACTAATCTGAATTCAAATT-----TAA---------------CC-TTTTG---------TTTTTGTTTTTATTTCTGTGCAGGTCACAAAGGAGGAGCTGGCCAAATTGATAAGCGGCTTTGATCAACAAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................GGCCAAATTGATAAGCGG...............1811.001100000
....................................................................................................................................................................................................................................................................................................................................GGTCACAAAGGAGGAGCTGGCCAAATT........................2711.001100000
.....................................................................................................................................................................................................................................................................................................................................GTCACAAAGGAGGAGCTGGC..............................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................GGAGGAGCTGGCCAAATTGATAAGC.................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................GAGGAGCTGGCCAAATTGATAAGC.................2411.001000001
.....................................................................................................................................................................................................................................................................................................................................................TGGCCAAATTGATAAGCGGC..............2011.001100000
.......................................................................................................................................................................................................................................................................................................................................CACAAAGGAGGAGCTGGC..............................1811.001000001
.....................................................................................................................................................................................................................................................................................................................................GTCACAAAGGAGGAGCTG................................1811.001000001
...............................................................................................................................................................................................................................................................................................................................................................GATAAGCGGCTTTGATCAACAAGA2411.001100000
...................................................................................................................................................................................................................................................................................................................................AGGTCACAAAGGAGGAGCTGGC..............................2211.001000001
............................................................................................................................................................................................................................................................................................................................................................ATTGATAAGCGGCTTTGATCAACA...2411.001000001
.....................................................................................................................................................................................................................................................................................................................................GTCACAAAGGAGGAGCTGGCCAAATTG.......................2711.001100000
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGGTTACAAAGGAGGAGCTGGCCAAATTGATTAGCGGATTTGATCAGCAGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................CAAAGGAGGAGCTGGCCAAATT........................2211.00101
...........................................................................................................................................................................................................................................................................................................................................................AATTGATTAGCGGATTTGATC.......2111.00110
..............................................................................................................................................................................................................................................................................................................................................GAGGAGCTGGCCAAATTGATTA...................2211.00110
.............................................................................................................................................................................................................................................................................................................................................GGAGGAGCTGGCCAAATTG.......................1911.00110
................................................................................................................................................................................................................................................................................................................................................GGAGCTGGCCAAATTGATTAGCGGAT.............2611.00110
...........................................................................................................................................................................................................................................................................................................................................AAGGAGGAGCTGGCCAAATTG.......................2111.00110
droAna3
ATCC---------------------------------------------------------------------------------CAAAAATTTATTGA-ATTTGTGCGTGACTC---A-----------------------------------------------------------------------------------------------------------------------------------------------TCTGCTAA-------------TTT------ATTTTTATGACTC---TTACT--CT-CTTCCAGGTGACAAAGGAGGAGCTGGCCAAACTGATCAGCGGTTTCGACCAGCAGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................GGCCAAACTGATCAGCGGT..............1922.505000050
............................................................................................................................................................................................................................................................................................................................................................ACTGATCAGCGGTTTCGACC.......2022.004000040
.......................................................................................................................................................................................................................................................................................................................................GACAAAGGAGGAGCTGGCC.............................1921.503110010
....................................................................................................................................................................................................................................................................................................................................GGTGACAAAGGAGGAGCT.................................1821.503110010
...........................................................................................................................................................................................................................................................................................................................................AAGGAGGAGCTGGCCAAACT........................2021.002200000
.............................................................................................................................................................................................................................................................................................................................................................CTGATCAGCGGTTTCGACCAGCAGG.2511.001100000
.......................................................................................................................................................................................................................................................................................................................................GACAAAGGAGGAGCTGGCCAA...........................2121.002002000
...........................................................................................................................................................................................................................................................................................................................................................AACTGATCAGCGGTTTCGACCAGCA...2521.002000002
.........................................................................................................................................................................................................................................................................................................................................CAAAGGAGGAGCTGGCCAAA..........................2020.501100000
...................................................................................................................................................................................................................................................................................................................................AGGTGACAAAGGAGGAGCTGGCC.............................2320.501100000
...........................................................................................................................................................................................................................................................................................................................................................AACTGATCAGCGGTTTCGACCAGC....2420.501010000
....................................................................................................................................................................................................................................................................................................................................GGTGACAAAGGAGGAGCTGGC..............................2120.501100000
...................................................................................................................................................................................................................................................................................................................................AGGTGACAAAGGAGGAGCTGGCCAAAC.........................2720.501000001
.............................................................................................................................................................................................................................................................................................................................................................CTGATCAGCGGTTTCGACC.......1920.501100000
..............................................................................................................................................................................................................................................................................................................................................GAGGAGCTGGCCAAACTGATCAGC.................2420.501000010
.......................................................................................................................................................................................................................................................................................................................................GACAAAGGAGGAGCTGGCCAAACT........................2420.501100000
.......................................................................................................................................................................................................................................................................................................................................GACAAAGGAGGAGCTGGCCA............................2020.501000010
...............................................................................................................................................................................................................................................................................................................................................AGGAGCTGGCCAAACTGAT.....................1920.501100000
............................................................................................................................................................................................................................................................................................................................................................ACTGATCAGCGGTTTCGACCAGC....2320.501010000
.......................................................................................................................................................................................................................................................................................................................................................GCCAAACTGATCAGCGGTTTC...........2120.501100000
........................................................................................................................................................................................................................................................................................................................................ACAAAGGAGGAGCTGGCCAA...........................2020.501100000
...........................................................................................................................................................................................................................................................................................................................................................AACTGATCAGCGGTTTCGACCA......2220.501100000
........................................................................................................................................................................................................................................................................................................................................ACAAAGGAGGAGCTGGCCAAA..........................2120.501100000
....................................................................................................................................................................................................................................................................................................................................GGTGACAAAGGAGGAGCTGGCCA............................2320.501000001
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAGGAGGAGCTGGCCAA...........................2320.501100000
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGTTTCGACCA......2320.501000001
.......................................................................................................................................................................................................................................................................................................................................GACAAAGGAGGAGCTGGCCAAAC.........................2320.501100000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAGGAGGAGCTGGCC.............................2120.501100000
.........................................................................................................................................................................................................................................................................................................................................................CAAACTGATCAGCGGTTTCGACC.......2320.501000010
...................................................................................................................................................................................................................................................................................................................................AGGTGACAAAGGAGGAGCTGGC..............................2220.501000001
......................................................................................................................................................................................................................................................................................................................................................GGCCAAACTGATCAGCGC...............1830.331010000
droBip1
CTTAAAGTA-CC--------GA-----------------------------------------------------------CATAC-CGAATTTATTGA-ATTCGTGCGTGACTC---AACCCA------------------------------------------------------------------------------------------------------------------------------------------TCTACTAA-------------TT-------ATATTTATG---C------TC--CT-CTTCCAGGTGACAAAGGAGGAGCTGGCCAAACTGATCAGCGGTTTCGACCAGCAGGASizeHit CountTotal NormTotal
No Reads
droKik1
GGCAGAGTA-AG--------A----------------------------------------------------ACTAAGAACGCACCGAAATTTATTGAAATGCGTGCGTGACCCTTAAAAGTCC--AATAAGCCATTCCA---------------------------------------------------------CATGCAATGTC-------------------------------------------------CACCCCCACTAA-------------TCCAAACCCT---------ATC---TTTCCATAT-TTTGCAGGTGACAAAGGAGGAGCTCTCCAAACTGATTAGCGGCTTTGACCAGCAGGASizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAGGTGACAAAAGATGAGCTCTCCAAACTGATCAGCGGCTTCGACCAGCAGGASizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATTAGCGGCTTCGACCAGCAGGASizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGACCAGCAGGASizeHit CountTotal NormTotal
No Reads
droBia1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAGCTTTCTAAACTAATCAGCGGATTCGACCAGCAGGASizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGTGACAAAAGAGGAACTCTCTAAACTAATCAGCGGCTTCGATCAGCAGGASizeHit CountTotal NormTotal
No Reads
droEug1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGACCAACAGGASizeHit CountTotal NormTotal
No Reads
dm3
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAA-------------CTCCAAACTT---------TCC---TTACCA--T-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTTGACCAGCAGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAACTGATC....................25141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTTGACCAGC....25119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAGGAGCTCTCCAAACTGATCAGCGGC..............27116.00160000000000000000000000000000000000000000000000000000000000000000000000000000003130000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000200000010000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................................................................................CTGATCAGCGGCTTTGACC.......19112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010
....................................................................................................................................................................................................................................................................................................................................GGTGACAAAAGAGGAGCTCTCCA............................23112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000107000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGACAAAAGAGGAGCTCTCCAAACT........................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000003000000200000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................AAAGAGGAGCTCTCCAAACTGATCAGCG................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAA-------------CTCCAAACTT---------TTC---TTACCATCT-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTTGACCAGCAGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................CTCCAAACTGATCAGCGGCTTT...........2214.00402200000000000000
................................................................................................................................................................................................................................................................................................................................................GGAGCTCTCCAAACTGATCAGCGGCT.............2612.00201000010000000000
......................................................................................................................................................................................................................................................................................................................................TGACAAAAGAGGAGCTCTCCAAACTG.......................2612.00200010001000000000
.......................................................................................................................................................................................................................................................................................................................................................TCCAAACTGATCAGCGGCTTTGACCAGC....2812.00200000002000000000
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCT.............1812.00201100000000000000
...................................................................................................................................................................................................................................................................................................................................................GCTCTCCAAACTGATCAGCGGC..............2212.00200100000000001000
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCTTTGACC.......2412.00202000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTGATCAGCGGCTTTGACC.......2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCCAAACTGATCAGCGGCTTTGACCA......2611.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTGATCAGCGGCTTTGACCAGCA...2511.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................ACAAAAGAGGAGCTCTCCAAACTG.......................2411.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTTGACCAGC....2511.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCTTTGACCAGC....2711.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCTCC.............................2111.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CTGATCAGCGGCTTTGACC.......1911.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCTCCAAACTG.......................2711.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................CAAAAGAGGAGCTCTCCAAACT........................2211.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTTGACCAGCAG..2711.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................TCTCCAAACTGATCAGCGGCTTTGACCA......2811.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................TCCAAACTGATCAGCGGCTTTGACC.......2511.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCCAAACT........................2411.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCT...............................1911.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................AGAGGAGCTCTCCAAACTGATCAGCGGC..............2811.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................CTCTCCAAACTGATCAGCGGCT.............2211.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAACT........................2111.00100000000000100000
...........................................................................................................................................................................................................................................................................................................................................AAAGAGGAGCTCTCCAAACTGATCAGCG................2811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCCAAACTGATC....................2811.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................TCTCCAAACTGATCAGCGGCT.............2111.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCTTTGACCAGCAG..2211.00100001000000000000
.............................................................................................................................................................................................................................................................................................................................................AGAGGAGCTCTCCAAACTGATCAGC.................2511.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................CTCCAAACTGATCAGCGGC..............1911.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCC.............................1911.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCC.............1820.50100100000000000000
droSec2
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAA-------------CTCCAAACTT---------TCC---TTACCATCT-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTTGACCAGCAGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCTCCAAACT........................2617.0070340
...................................................................................................................................................................................................................................................................................................................................AGGTGACAAAAGAGGAGCTC................................2012.0021100
........................................................................................................................................................................................................................................................................................................................................ACAAAAGAGGAGCTCTCCAAA..........................2111.0011000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCTCCA............................2211.0010100
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCT...............................1911.0010010
...............................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCTTTGACCAG.....1911.0010001
.................................................................................................................................................................................................................................................................................................................................................................TCAGCGGCTTTGACCAGCAGG.2111.0010010
..................................................................................................................................................................................................................................................................................................................................................AGCTCTCCAAACTGATCAGCGG...............2211.0010010
.........................................................................................................................................................................................................................................................................................................................................................CAAACTGATCAGCGGCTTTGACC.......2311.0010010
......................................................................................................................................................................................................................................................................................................................................................CTCCAAACTGATCAGCGGCTTTGA.........2411.0010100
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCTTTGACC.......2411.0010010
..................................................................................................................................................................................................................................................................................................................................................AGCTCTCCAAACTGATCAGCGGC..............2311.0010100
..............................................................................................................................................................................................................................................................................................................................................................TGATCAGCGGCTTTGACC.......1811.0010010
...............................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCTTTGACCAGCA...2111.0010100
................................................................................................................................................................................................................................................................................................................................................GGAGCTCTCCAAACTGATC....................1911.0011000
..............................................................................................................................................................................................................................................................................................................................................GAGGAGCTCTCCAAACTGAT.....................2011.0011000
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCCAAACTG.......................2511.0010010
....................................................................................................................................................................................................................................................................................................................................................CTCTCCAAACTGATCAGCGGC..............2111.0010100
.........................................................................................................................................................................................................................................................................................................................................CAAAAGAGGAGCTCTCCAAAC.........................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCTTTGACCAGC....2011.0011000
droYak3
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTAA-------------CTCCAAACTT---------T--------CCA--T-CTTGCAGGTGACAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGATCAGCAGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCCAAACT........................24114.001405300060000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCTCCAAACT........................2615.00500000050000
...........................................................................................................................................................................................................................................................................................................................................AAAGAGGAGCTCTCCAAACTGATCAGCGG...............2912.00200000020000
.........................................................................................................................................................................................................................................................................................................................................CAAAAGAGGAGCTCTCCAAACTGATCAGC.................2912.00200000020000
.........................................................................................................................................................................................................................................................................................................................................CAAAAGAGGAGCTCTCCAAACT........................2212.00202000000000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCTCCAAAC.........................2512.00210000010000
......................................................................................................................................................................................................................................................................................................................................................CTCCAAACTGATCAGCGGCTTCGATC.......2611.00101000000000
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCCAAACC........................2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTCGAT........2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCTTCGAT........2311.00101000000000
....................................................................................................................................................................................................................................................................................................................................................CTCTCCAAACTGATCAGCGGCTTCGAT........2711.00100000010000
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCCAAAC.........................2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................GCTCTCCAAACTGATCAGCGG...............2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................CTCCAAACTGATCAGCGGC..............1911.00100000010000
.............................................................................................................................................................................................................................................................................................................................................AGAGGAGCTCTCCAAACTGAT.....................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................GCTCTCCAAACTGATCAGCGGCTTCGATC.......2911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAACT........................2111.00100100000000
....................................................................................................................................................................................................................................................................................................................................GGTGACAAAAGAGGAGCTCTCC.............................2211.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTT...........1811.00100001000000
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCTTCGATC.......2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................CAAACTGATCAGCGGCTTCGATC.......2311.00100100000000
................................................................................................................................................................................................................................................................................................................................................GGAGCTCTCCAAACTGATCAGCGGCTT............2711.00101000000000
.............................................................................................................................................................................................................................................................................................................................................AGAGGAGCTCTCCAAACT........................1811.00110000000000
...........................................................................................................................................................................................................................................................................................................................................AAAGAGGAGCTCTCCAAACTGATCAGC.................2711.00100000010000
...............................................................................................................................................................................................................................................................................................................................................AGGAGCTCTCCAAACTGATCAGCGGCC.............2711.00100100000000
................................................................................................................................................................................................................................................................................................................................................GGAGCTCTCCAAACTGATCAGC.................2211.00101000000000
.................................................................................................................................................................................................................................................................................................................................................GAGCTCTCCAAACTGATCAGC.................2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCT...............................1911.00100010000000
.....................................................................................................................................................................................................................................................................................................................................GTGACAAAAGAGGAGCTCC...............................1911.00100100000000
...................................................................................................................................................................................................................................................................................................................................................GCTCTCCAAACTGATCAGCGGCTTC...........2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTGATCAGCGGCTTCGATC.......2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTCGATC.......2211.00100000010000
.......................................................................................................................................................................................................................................................................................................................................GACAAAAGAGGAGCTCTCCAAACTG.......................2511.00101000000000
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAACTGATCAGC.................2811.00100000010000
........................................................................................................................................................................................................................................................................................................................................ACAAAAGAGGAGCTCTCCAAACT........................2311.00100000010000
.........................................................................................................................................................................................................................................................................................................................................CAAAAGAGGAGCTCTCCAAACTG.......................2311.00100000010000
.............................................................................................................................................................................................................................................................................................................................................AGAGGAGCTCTCCAAACTGATCAGC.................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................AAAGAGGAGCTCTCCAAACT........................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAAC.........................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCTTCGATCAGCA...2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCTTCGATCA......2511.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................TCTCCAAACTGATCAGCGGC..............2011.00110000000000
....................................................................................................................................................................................................................................................................................................................................................CTCTCCAAACTGATCAGCGGCTTCG..........2511.00101000000000
droEre2
GATCACGAGACC--------A----------------GCCTATTAC---------------------------------------------------------------TAACT--------------------------------------------------------------------------------------------------------------------------------------------------CCACCACTAA-------------CTCCCAACTT---------TCC---TTACCA--T-CTTGCAGGTGTCAAAAGAGGAGCTCTCCAAACTGATCAGCGGCTTCGACCAGCAGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................AGAGGAGCTCTCCAAACTGATCAGC.................2515.0051001300
.........................................................................................................................................................................................................................................................................................................................................CAAAAGAGGAGCTCTCCAAACTGATCAGC.................2913.0031000200
..................................................................................................................................................................................................................................................................................................................................................................CAGCGGCTTCGACCAGCAGGA2112.0021000100
...............................................................................................................................................................................................................................................................................................................................................AGGAGCTCTCCAAACTGATCAGC.................2312.0020000200
.......................................................................................................................................................................................................................................................................................................................................GTCAAAAGAGGAGCTCTC..............................1812.0022000000
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAACT........................2112.0020000110
.....................................................................................................................................................................................................................................................................................................................................GTGTCAAAAGAGGAGCTCTCCA............................2212.0020001100
.....................................................................................................................................................................................................................................................................................................................................GTGTCAAAAGAGGAGCTCTCCAAACT........................2612.0021000100
........................................................................................................................................................................................................................................................................................................................................................CCAAACTGATCAGCGGCTTC...........2012.0022000000
.......................................................................................................................................................................................................................................................................................................................................GTCAAAAGAGGAGCTCTCCAAACT........................2412.0020001100
.......................................................................................................................................................................................................................................................................................................................................GTCAAAAGAGGAGCTCTCCAAACTG.......................2512.0021000100
..................................................................................................................................................................................................................................................................................................................................................AGCTCTCCAAACTGATCAGC.................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................TCCAAACTGATCAGCGGCT.............1911.0010000100
............................................................................................................................................................................................................................................................................................................................................AAGAGGAGCTCTCCAAACTGATCAGCG................2711.0011000000
...........................................................................................................................................................................................................................................................................................................................................................AACTGATCAGCGGCTTCGACC.......2111.0010100000
....................................................................................................................................................................................................................................................................................................................................GGTGTCAAAAGAGGAGCTCT...............................2011.0010001000
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAACTGATC....................2511.0011000000
......................................................................................................................................................................................................................................................................................................................................................CTCCAAACTGATCAGCGG...............1811.0011000000
...........................................................................................................................................................................................................................................................................................................................................AAAGAGGAGCTCTCCAAACTGATCAGC.................2711.0010000100
.....................................................................................................................................................................................................................................................................................................................................................TCTCCAAACTGATCAGCGGCTT............2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................TCAGCGGCTTCGACCAGCA...1911.0011000000
.......................................................................................................................................................................................................................................................................................................................................................TCCAAACTGATCAGCGGCTTCGACC.......2511.0011000000
.............................................................................................................................................................................................................................................................................................................................................AGAGGAGCTCTCCAAACTG.......................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................AAAGAGGAGCTCTCCAAACT........................2011.0011000000
....................................................................................................................................................................................................................................................................................................................................................CTCTCCAAACTGATCAGCGGCTT............2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................GAGCTCTCCAAACTGATCAGCGG...............2311.0010010000
.........................................................................................................................................................................................................................................................................................................................................CAAAAGAGGAGCTCTCCAAACT........................2211.0010000100
......................................................................................................................................................................................................................................................................................................................................................CTCCAAACTGATCAGCGGCT.............2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTCGACC.......2211.0010000100
...................................................................................................................................................................................................................................................................................................................................................GCTCTCCAAACTGATCAGCGGCTT............2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................AAACTGATCAGCGGCTTCGACCAGCA...2611.0011000000
.....................................................................................................................................................................................................................................................................................................................................GTGTCAAAAGAGGAGCTCTCC.............................2111.0010000100
.....................................................................................................................................................................................................................................................................................................................................................TCTCCAAACTGATCAGCGGCTTC...........2311.0010000100
..........................................................................................................................................................................................................................................................................................................................................AAAAGAGGAGCTCTCCAAACTGATCAGC.................2811.0010000100
............................................................................................................................................................................................................................................................................................................................................AAGAGGAGCTCTCCAAACTGATCAGC.................2611.0010000100
...............................................................................................................................................................................................................................................................................................................................................................GATCAGCGGCTTCGACCAGCAG..2211.0011000000
.......................................................................................................................................................................................................................................................................................................................................GTCAAAAGAGGAGCTCTCC.............................1911.0010100000
.........................................................................................................................................................................................................................................................................................................................................................CAAACTGATCAGCGGCTTCGACCAGC....2611.0011000000
....................................................................................................................................................................................................................................................................................................................................................CTCTCCAAACTGATCAGCGGC..............2111.0011000000
....................................................................................................................................................................................................................................................................................................................................GGTGTCAAAAGAGGAGCTCTC..............................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................................TGATCAGCGGCTTCGACCAGCAG..2311.0010000010

Generated: 05/18/2015 at 12:31 AM