ID:

dps_1343

 Coordinate:

4_group1:294984-295134 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.3 -21.0 -21.0

Flybase annnotation

CDS [Dpse\GA21521-cds]; exon [dpse_GLEANR_16792:1]; intron [Dpse\GA21521-in]

No Repeatable elements found

Sense Strand Reads

------------------------------------------------##---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCTGAAAATGTTAGTAAGAACCGTAAATTAAGCGTCAAAATTGTGAAAACCGATCAGCCGAGTCCATTGGCAGTGTTTCGCAATAGTTCAAAGACAATTTAAATGTGCAATAATATAGAAAAATTGATTTAAAAATTTGTGACGGCTAAAAATGTGTGAAAAAATTGAACACGACGGCTGTCGCTCGAATGACAGCGCTCCCAAAGAGAG
**************************************************..........(((((...(((..(((((..(((((((((..((....(((((.....)))))..)))))))))))..........((((((...((((......))))...)))))).............)))))..)))..))).))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M059
embryo
 V112
male body		 SRR902011
testis
 SRR902010
ovaries
.............................GCCAAATAATTTTCTGAAAAT......................................................................................................................................................................................................... 21 0 1 3.00 3 1 1 1 0 0 0
............................TGCCAAATAATTTTCTGAAAATG........................................................................................................................................................................................................ 23 0 1 2.00 2 0 2 0 0 0 0
......GTAGCAGCACGTGTATAAAAAGTGCC........................................................................................................................................................................................................................... 26 0 1 2.00 2 0 1 1 0 0 0
......GTAGCAGCACGTGTATAAAAAGT.............................................................................................................................................................................................................................. 23 0 1 2.00 2 1 0 0 1 0 0
................................AAATAATTTTCTGAAAATGG....................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
........AGCAGCACGTGTATAAAAA................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
.....AGTAGCAGCACGTGTATAA................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
........AGCAGCACGTGTATAAAAAGT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
AAATCAGTAGCAGCACGTGTATA.................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
............................TGCCAAATAATTTTCTGAAAAT......................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
........AGCAGCACGTGTATAAAAAGTGC............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
...........................GTGCCAAATAATTTTCTGAAAATGGAT..................................................................................................................................................................................................... 27 3 1 1.00 1 0 0 1 0 0 0
...........AGCACGTGTATAAAAAGT.............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
..........................................CTGAAAATGTTAGTAAGAACC............................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
....CAGTAGCAGCACGTGTATAAAAAGTGCC........................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0
...TCAGTAGCAGCACGTGTATA.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0
..............................CCAAATAATTTTCTGAAAATGG....................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.AATCAGTAGCAGCACGTGTATAAA.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0
................................................................................................................AGCGTTTCGCAATAGTTCAAG...................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................................................................GAAAAAATTGAACACGACGGC................................ 21 0 1 1.00 1 0 0 0 0 1 0
........................................................................................................................................................................................................AAAAATTGAACACGACGGCT............................... 20 0 1 1.00 1 0 0 0 0 1 0
.AATCAGTAGCAGCACGTGT....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................TGAAAAAATTGAACACGACGG................................. 21 0 1 1.00 1 1 0 0 0 0 0
.....ATCAGCAGCACGTGTATAAAAAGTGC............................................................................................................................................................................................................................ 26 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................................AATTGAACACGACGGCTGTCG........................... 21 0 1 1.00 1 1 0 0 0 0 0
....CAGTAGCAGCACGTGTATAAAAA................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................ATGGAACACGACGACTGTC............................ 19 2 1 1.00 1 1 0 0 0 0 0
......GTAGCAGCACGTGTATAA................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
..................................................................................TGTGAAAACCGATCAGCCGAG.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.AATCAGTAGCAGCACGTGTATAA................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0
..........................................................................................................................................................................................................AGATGGAACACGACGACTGTC............................ 21 3 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................................ATTGATTTAAAAATTTGGT..................................................................... 19 2 16 0.38 6 6 0 0 0 0 0
...................................................................................................................................................................ATTGATTTAAAAATTTGG...................................................................... 18 1 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................................................TTGATTTAAAAATTTGGTA.................................................................... 19 2 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................................TTGATTTAAAAATTTGGT..................................................................... 18 2 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................................................................................................AATGACAGCTCTGCCAAA..... 18 2 12 0.08 1 0 0 0 0 0 1
..................................................................................................................................................................................................................CATGACGGCCGTCGCTGGA...................... 19 3 17 0.06 1 1 0 0 0 0 0

Anti-sense strand reads

TTTAGTCATCGTCGTGCACATATTTTTCACGGTTTATTAAAAGACTTTTACAATCATTCTTGGCATTTAATTCGCAGTTTTAACACTTTTGGCTAGTCGGCTCAGGTAACCGTCACAAAGCGTTATCAAGTTTCTGTTAAATTTACACGTTATTATATCTTTTTAACTAAATTTTTAAACACTGCCGATTTTTACACACTTTTTTAACTTGTGCTGCCGACAGCGAGCTTACTGTCGCGAGGGTTTCTCTC
**************************************************..........(((((...(((..(((((..(((((((((..((....(((((.....)))))..)))))))))))..........((((((...((((......))))...)))))).............)))))..)))..))).))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body
..................................................................................................GGCTCAGGTAACCGTCGCAA..................................................................................................................................... 20 1 1 1.00 1 1 0 0
.................................................................................................................CACAAAGCGTTATCAAGTTT...................................................................................................................... 20 0 1 1.00 1 0 1 0
.........................................................................................TAGCTAGTCGGCTCAGGTAAC............................................................................................................................................. 21 1 1 1.00 1 0 0 1
.....................................................................................................TCAGGTAACCGTCGCAAAGCG................................................................................................................................. 21 1 1 1.00 1 1 0 0
.............................................................................................................................................................................TTTAAACACTGCCGATTTTTA......................................................... 21 0 1 1.00 1 1 0 0
..................................................................................................GGCTCAGGTAACCGTCGCAAA.................................................................................................................................... 21 1 1 1.00 1 1 0 0
.................................................................................................CGGCTCAGGTAACCGTCACAA..................................................................................................................................... 21 0 1 1.00 1 1 0 0
...................................................................................................................................................................................................................................CTTACTGTCGCGAGGGTTTCT... 21 0 1 1.00 1 1 0 0
.................................................................................................CGGCTCAGGTAACCGTCGCAA..................................................................................................................................... 21 1 1 1.00 1 1 0 0
...AGTCATCGTCGTGCACATATT................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
...........................................................................................GCTAGTCGGCTCAGGTAACC............................................................................................................................................ 20 0 1 1.00 1 0 1 0
.............GTGCACATATTTTTCACGGTTT........................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0
.........................................................................................................................................................................AAATTTTGAACAGTGCCGAT.............................................................. 20 3 4 0.25 1 1 0 0
.........................................................................................................................................................................AACTTTTGAACAGTGCCGAT.............................................................. 20 3 6 0.17 1 1 0 0
...............................TTTTCTTCAAAGACTTTTAC........................................................................................................................................................................................................ 20 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 4_group1:294934-295184 - dps_1343 AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCTGAAAATGTTAGTAAGAACCGTAAATTAAGCGTCAAAATTGTGAAAACCGATCAGCCGAGTCCATTGG-CAGTGTTTC-GC-AATAGTTCAAAG-AC-AATTTAAATGTGCAATAATATAGAAAAATTGATTTAAAAAT-TTGTGACGGCTAAAAATGTGTGA-------------AAAAA-TTGAACACGACGGC---TGTCG------CTCGAATGACAG-CGCTCCCAAA-G----------AGAG
droPer2 scaffold_1:289852-290102 - AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCTGAAAATGTTAGTAAGAACCGTAAATTAAGCGTCAAAATTGTGAAAATCGATCAGCCGAGTCCATTGG-CAGCGTTTC-GC-AATAGTTCAAGG-AC-AATTTAAATGTGCAATAATATAGAAAAATTGATTTAAAAAT-TTGTGACGGCTAAAAATGTGTGA-------------AAAAA-TTGAACACGACGGC---TGTCG------CTCGAATGACAG-CGCTCCCAAA-G----------AGAG
droWil2 scf2_1100000004521:7985914-7986118 - AAAATCAGT--TAGCACGTGTATAAAAAGTGCCAAATAATAATCAGAAAATGTTAGTATAAACACGTAATTAATCAATTGAAATGTGAAAAACAGAAGGGTGACCTTATTCCGCATCGAATATAT-ATT-GTTTTGTG-AC-AATCCAAGTGAGATTTGGTCAATAAAAT-TGGAATTCAAAT-TCTGAAATGCCAA-AATTTTAGAG-----------AAAG--------------------------------------------------------------------AA
droVir3 scaffold_12963:3272407-3272671 + dvi_10293 AA--TC---AGCAGCACGTGTATAAAAAGTGCCAAAAAATAATCAGAAAATGTTAGTATTATTCAACGATTTAATTCATAATAAGTGAAAGTCGAATTAACAAGGCTGTTTG-CAAAAATTT-GCTAATAAATTTAAG-CC-CGTATAAGTGAGCAATAGTATACAAAACTGCATTCGAAAAT-TTAA--C--CCAA-AATG--TGAAACACAAAACGAAAAGAATTTTTACACGACGTCGATGGACGTTGCGGCACGAGTGACGGGCAATGGCAGA-G----------AGAG
droMoj3 scaffold_6500:13635774-13636038 + AA--TC---AGCAGCACGTGTATAAAAAGTGCCAAAAAGTAATCAGAAAATGTTAGTATTATTTAACGATTTAATTCATAATACGTGAAATACAATTAACCAAGGCAGTTTG-CAAAATTTT-GCTGACAAAATTAAG-CC-AGTTTAAGTGAGCAATAGTACTAAAAACTACATTTGAAAAT-TTAA--C--CCAA-AATG--TGAAATACAAATCAAAAAGAATTTTTACACGACGACGGCGGACGTTGCGGCACGAGTGACTGGCATTGACGAA-G----------AGAG
droGri2 scaffold_15252:2854240-2854501 + AA--TC---AGCAGCACGTGTATAAAAAGTGCCAAATAATAATCAGAAAATGTTAGTATTATTCAACGATTTAATTCATAATATGTGAAAGACGAACTAACAAGGCAGTTTG-CAAAAATTT-GCTTGCAAAATTTAG-CC-AATTTAAGTGAGCAAGAGCATTAAAAATTGCAAACGAAAAT-TTAA--C--CCAA-AATG--TGAAACACAAAACGAAAAGAATTTTTACACGACGGC---GGACGTTGCGGCACGAGTGACTGGCGCTGACAGA-G----------AGCG
droAna3 scaffold_12916:11396780-11397037 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATAATCCCTAAATTAAGCGTACGAAATGTGAAAAGCAGAACGGCGATACCGCGCCGCGTCGATTCCGC-C-CGGTTT-CGGCTC-AATTCAACAGTGAAACAACAGTAAAAAATTGACTTGAAAAT-TTGTGGCCGTCAGAAATGTGTGGAACACAAAG---AAAAAA-T--TACACGACGGC---TGTCGCC----CCCGAATGACAG-CG----CCGA-GGG----------TG
droBip1 scf7180000396572:1065699-1065961 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTCATAAAATTAAGCGTACGAAAAGTGAAAAGCAGAAAGGCAATAACGCGGGCCATCGTTTCCGG--CCGGTTT-CGG-CG-CATTACACAGTGAGACAACAGTAAAAAATCGACTTGAAAATTTTGTGGCCAACAGAAATGTGTGGAACACAAAG----AAAAA-T--TACACGACGGC---TGTCGCC----CCCGAATGACAG-CG----CCGA-GGGTG----GGAGAG
droKik1 scf7180000302468:39777-40038 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAAAAATTTTCAGAAAATGTTAGTATAACCATTAGATTAAGCGTCCGAAATGTGGAAAGCGGCTGGGCGAACCCGCGGCCCGTCGGCATCGA--TCGGTTT-CAG-GCGAATTGCAGTGTGCGGCAATAGAGAAAATT-CGATTTGAAAT-TTCGGACGGTCGG-AATATGTGAAACACAAAGG--AAAAAA-T--TACACGACGGC---TGT--------CGCGAATGACAG-AC----C-GA-GACGGGAAGTGAGAG
droFic1 scf7180000453813:59413-59658 - AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCGTAGATTAAGCGTTTAAAAAGTGAAAAGTGGTCAGGGGAAACCGCGCCCCATCGATTTGAA-AACGGTTT-GGG-AC-TATCCGAATGTGAAACAATGTAGAAAAG-GGATTTGAAAAT-TTCTGACGGTCAA-AATGAGTGGAACGCAAAAGA-AAAAAA-T--TACACG-------------------CCCGAATGATGG-TG----CAGG-GAG----------TG
droEle1 scf7180000491024:44652-44905 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCCTAGTTTAAGCGTTCGAAATGTGGAAATCGGCTAGGTGAACCGGTGCTCTATCGATTCGGC-AACGGTTT-AGT-GC-GATTCGAGTGTGCGGCTATA-AGAAAAA-AGATTTTAAAAT-TTCTGACGGTCAG-AATGAGTGGCACGCAAAA---AAAAAA-T--TACACG-------------------CCCGAATGACAG-CG----CAGGGGAGTGTATGCGAGAG
droRho1 scf7180000768899:14589-14845 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAAAAAATGTTAGTATATTTTATAGATTAAGCGTTCGAAATATGTGAAGCGGGCGGGCGAACCCGTGCACCATCTATACGGA-AACAGTTT-GAT-GC-GATACAAGTGTGCGGCAATATAGAAAAA-GGATTTTTAATT-TTCTGACGGTCAG-AATGAGTGGAACGCAAAAGAAAAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAGTGTGAGCGAGAG
droBia1 scf7180000300079:28262-28375 - AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCA-ATAGTTTTCAAAAAATGTTAGTATATATTATAGATTAATAACTTAAAATGGAGAAAGCAGCCAGGGGAACACGTTCCCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414129:12844-13085 - AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCTTATATTAAGCGTTCGAAATGTGAAAAGCGGCTAGGGGAACTCGTGACCCATCGAATCCGA-AACGGTTT-TAG-GC-GATCCGAGAGTGCTTCAACGCAGAAAATAGCTTTTTAAAAT-TTCTGACGGTCAA-AATGAGTGGAACGCAA------AAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TG
droEug1 scf7180000409676:601386-601634 - AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATACTTTTTATATTAAGCGTTCGAAATGTGAAAAGCGTCGAGGCAAATGTGTGCCCTATTGATTCTGA-AACGGTTT-CTG-GC-GATCATTGTGTGTTTCAGTGCAGAAAAA-GGTTTTAAAAAT-TCCTGACGGTCAG-AATGAGTGAAACGCAAAG--AAAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGA-GAGTG------GGAG
dm3 chr2L:5981786-5982021 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATACCCTAGATTAAGCGTTTGAAATGTAAAAAGCCGCAAGGCGATCTTGTGCCGCATCGATTCCGC-AACTGCTT-AGC-AT-AATTTCCGCGTGTTTTAATGCAAAAAAC-GCGATTTTAAAT-TTCTGACGGTCAA-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGTATGACAG-TG----CAGG-GAG----------TG
droSim2 2l:5777398-5777634 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTCCCTAGATTAAGCGTTCGAAATGTGAAAAGCAGCAAGGCGATCTTGTGCCGCATCGTTTCCGG-AATTGCTT-AGC-AT-AATTTCCTTGTGTTTTAATGCTAAAAAACGCGATTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TG
droSec2 scaffold_5:4052755-4052991 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTCCCTAGATTAAGCGTTCGAAATGTGAAAAGAAGCAAGGCGATCTTGTGCCGCATCGTTTTCGG-AATTGCTT-AGC-AT-AATTTCCTTGTGTTTTAATGCAAAAAAACGCGATTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TG
droYak3 2L:13212364-13212600 - AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCGTAGATTAAGCGTTCGAAATGTGAAAAGCCGCAAGGCGAACTCGTGCCGCATCGATTCCGC-AACTGCTT-TGC-AC-CAACTCCGGGTGTTTTAATGCAGAAAAACGCGTTTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TG
droEre2 scaffold_4929:6072339-6072583 + AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCCTAGATTAAGCGTTCGAAGTGTGTTAAGACGCAAGGCGAACTCGTGCCGCATCGATTCCGC-AACTGCTT-TCC-AC-CATCTCCGTGTGTTTTAATGCAGAAAAACGCGTTTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CTGG-GAGTGGGAG--CGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCTGAAAATGTTAGTAAGAACCGTAAATTAAGCGTCAAAATTGTGAAAACCGATCAGCCGAGTCCATTGG-CAGTGTTTC-GC-AATAGTTCAAAG-AC-AATTTAAATGTGCAATAATATAGAAAAATTGATTTAAAAAT-TTGTGACGGCTAAAAATGTGTGA-------------AAAAA-TTGAACACGACGGC---TGTCG------CTCGAATGACAG-CGCTCCCAAA-G----------AGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................GCCAAATAATTTTCTGAAAAT..................................................................................................................................................................................................................................................2113.0030110100000
.............................TGCCAAATAATTTTCTGAAAATG.................................................................................................................................................................................................................................................2312.0020000200000
.......GTAGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2612.0020010100000
.......GTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2312.0020100001000
.................................AAATAATTTTCTGAAAATGG................................................................................................................................................................................................................................................2011.0010100000000
.........AGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................1911.0010100000000
......AGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................1911.0010000100000
.........AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2111.0010100000000
AA-ATCAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................2311.0010010000000
.............................TGCCAAATAATTTTCTGAAAAT..................................................................................................................................................................................................................................................2211.0010100000000
.........AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2311.0010000100000
............................GTGCCAAATAATTTTCTGAAAATGGAT..............................................................................................................................................................................................................................................2711.0010010000000
............AGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1811.0010000100000
...........................................CTGAAAATGTTAGTAAGAACC.....................................................................................................................................................................................................................................2111.0010100000000
.....CAGTAGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2811.0010000001000
....TCAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................2011.0010000001000
...............................CCAAATAATTTTCTGAAAATGG................................................................................................................................................................................................................................................2211.0010100000000
.A-ATCAGTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2411.0010000001000
.............................................................................................................................................................................................................GA-------------AAAAA-TTGAACACGACGGC---..................................................2111.0010000000010
............................................................................................................................................................................................................................AAAAA-TTGAACACGACGGC---T.................................................2011.0010000000010
.A-ATCAGTAGCAGCACGTGT................................................................................................................................................................................................................................................................................1911.0010100000000
............................................................................................................................................................................................................TGA-------------AAAAA-TTGAACACGACGG......................................................2111.0010100000000
...............................................................................................................................................................................................................................AA-TTGAACACGACGGC---TGTCG------.......................................2111.0010100000000
.....CAGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2311.0010000100000
.......GTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................1811.0010000100000
...................................................................................TGTGAAAACCGATCAGCCGAG.............................................................................................................................................................................................2111.0010100000000
.A-ATCAGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................2311.0010000000010
.........................................................................................................................................................................ATTGATTTAAAAAT-TTGGT........................................................................................................19160.3860600000000
.........................................................................................................................................................................ATTGATTTAAAAAT-TTGG.........................................................................................................1830.3310100000000
..........................................................................................................................................................................TTGATTTAAAAAT-TTGGT........................................................................................................18200.1530300000000
droPer2
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCTGAAAATGTTAGTAAGAACCGTAAATTAAGCGTCAAAATTGTGAAAATCGATCAGCCGAGTCCATTGG-CAGCGTTTC-GC-AATAGTTCAAGG-AC-AATTTAAATGTGCAATAATATAGAAAAATTGATTTAAAAAT-TTGTGACGGCTAAAAATGTGTGA-------------AAAAA-TTGAACACGACGGC---TGTCG------CTCGAATGACAG-CGCTCCCAAA-G----------AGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................GTCAAAATTGTGAAAATCGATCAGCC................................................................................................................................................................................................2614.004400000
............................................................................................................................................................................................................................AAAAA-TTGAACACGACGGC---TGT...............................................2212.002200000
............AGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2012.002200000
...............................................AAATGTTAGTAAGAACCGTAA.................................................................................................................................................................................................................................2112.002000002
.......GTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2511.001000001
......AGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2411.001000001
..............................GCCAAATAATTTTCTGAAAAT..................................................................................................................................................................................................................................................2111.001001000
...ATCAGTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2311.001000001
.......GTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2111.001001000
.............................TGCCAAATAATTTTCTGAAAAT..................................................................................................................................................................................................................................................2211.001100000
.....CAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2511.001000001
.......GTAGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2611.001100000
...ATCAGTAGCAGCACGTGT................................................................................................................................................................................................................................................................................1811.001001000
.......GTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................1911.001000001
..............................................................................................................................................................................................................................AAA-TTGAACACGACGGC---T.................................................1811.001100000
................................................................................................................................................................................................................................A-TTGAACACGACGGC---TGTC..............................................1911.001010000
......AGTAGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2711.001000001
droWil2
AAAATCAGT--TAGCACGTGTATAAAAAGTGCCAAATAATAATCAGAAAATGTTAGTATAAACACGTAATTAATCAATTGAAATGTGAAAAACAGAAGGGTGACCTTATTCCGCATCGAATATAT-ATT-GTTTTGTG-AC-AATCCAAGTGAGATTTGGTCAATAAAAT-TGGAATTCAAAT-TCTGAAATGCCAA-AATTTTAGAG-----------AAAG--------------------------------------------------------------------AASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....CAGT--TAGCACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................2822.50500320
...........TAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1922.50500320
...........TAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2022.00400310
...............ACGTGTATAAAAAGTGCCAAATAAT.............................................................................................................................................................................................................................................................2521.50300120
.......GT--TAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2121.50301020
......AGT--TAGCACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................2721.50300210
.......GT--TAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2221.50300030
...............ACGTGTATAAAAAGTGCCAAATA...............................................................................................................................................................................................................................................................2321.00200020
...............ACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................2021.00200110
..............................GCCAAATAATAATCAGAAAATGTTAGT............................................................................................................................................................................................................................................2711.00100100
............AGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1821.00200020
..AATCAGT--TAGCACGTGTATAA............................................................................................................................................................................................................................................................................2121.00200020
...ATCAGT--TAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2521.00200020
..................................................................................ATGTGAAAAACAGAAGGG.................................................................................................................................................................................................1811.00101000
......AGT--TAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2021.00200020
......AGT--TAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2221.00201010
....................................................................................................TGACCTTATTCCGCATCGAAT............................................................................................................................................................................2111.00101000
...ATCAGT--TAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2320.50100100
...............ACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................1920.50100010
....TCAGT--TAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2720.50100010
.................GTGTATAAAAAGTGCCAAAT................................................................................................................................................................................................................................................................2020.50100010
...........TAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2220.50100100
.......GT--TAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................1920.50100100
.......GT--TAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2320.50100010
..AATCAGT--TAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2420.50100010
...........TAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................1820.50100010
...........................AGTGCCAAATAATAATCAGA......................................................................................................................................................................................................................................................2020.50100001
...ATCAGT--TAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2120.50100100
.............GCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................1820.50100010
...............ACGTGTATAAAAAGTGCCAAATAATA............................................................................................................................................................................................................................................................2620.50100010
........T--TAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2020.50100010
.AAATCAGT--TAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2320.50101000
.....CAGT--TAGCACGTGTATAA............................................................................................................................................................................................................................................................................1820.50100010
....TCAGT--TAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2420.50100010
...ATCAGT--TAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2820.50100100
AAAATCAGT--TAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................2520.50100001
.............GCACGTGTATAAAAAGTA......................................................................................................................................................................................................................................................................1820.50100010
.............GCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................1920.50100010
.......GT--TAGCACGTGTATAAAAAGTGCCAAATA...............................................................................................................................................................................................................................................................2920.50100100
..AATCAGT--TAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2220.50100010
...ATCAGT--TAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2620.50100001
..............CACGTGTATAAAAAGTGCCAAATAAT.............................................................................................................................................................................................................................................................2620.50100010
...ATCAGT--TAGCACGTGTATAA............................................................................................................................................................................................................................................................................2020.50100010
.........................AAAGTGCCAAATAATAATCAGAAAATG.................................................................................................................................................................................................................................................2720.50100001
...ATCAGT--TAGCACGTGTATA.............................................................................................................................................................................................................................................................................1920.50100010
.......GT--TAGCACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................2620.50100100
......AGT--TAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................1920.50100010
..............................GCCAAATAATAATCAGAAAATG.................................................................................................................................................................................................................................................2220.50100010
......................TAAAAAGTGCCAAATAATG............................................................................................................................................................................................................................................................1930.33100001
droVir3
AA--TC---AGCAGCACGTGTATAAAAAGTGCCAAAAAATAATCAGAAAATGTTAGTATTATTCAACGATTTAATTCATAATAAGTGAAAGTCGAATTAACAAGGCTGTTTG-CAAAAATTT-GCTAATAAATTTAAG-CC-CGTATAAGTGAGCAATAGTATACAAAACTGCATTCGAAAAT-TTAA--C--CCAA-AATG--TGAAACACAAAACGAAAAGAATTTTTACACGACGTCGATGGACGTTGCGGCACGAGTGACGGGCAATGGCAGA-G----------AGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
AA--TC---AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2513.003001000000000000100000000000000000100000000000000000000000000000
............AGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................1912.002000000000200000000000000000000000000000000000000000000000000000
.........AGCAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................1812.002000000000000000100100000000000000000000000000000000000000000000
.........AGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................1912.002000000000000000000000000000001000000000000000000000000000001000
............AGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2112.002000000000000000000010000000000000000100000000000000000000000000
...............ACGTGTATAAAAAGTGCCAAAAA...............................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.................GTGTATAAAAAGTGCCAAAAAAT.............................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
............AGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
.A--TC---AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.....................ATAAAAAGTGCCAAAAAATAATCAT.......................................................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
.A--TC---AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
................................................................................ATAAGTGAAAGTCGAATTAAC................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.A--TC---AGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
..............................GCCAAAAAATAATCAGAAAATGGAT..............................................................................................................................................................................................................................................2511.001000000000000000000000000000000001000000000000000000000000000000
..........GCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................ATAAAAAGTGCCAAAAAATAATCAGAA.....................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..............CACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.....................ATAAAAAGTGCCAAAAAAT.............................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.........AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
......................................................AGTATTATTCAACGATTT.............................................................................................................................................................................................................................1811.001000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................CTGCATTCGAAAAT-TTAA--C--CC..................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CGATGGACGTTGCGGCACGAG.................................2111.001000000000000000000000000000000000000000000000000000000000000010
AA--TC---AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
.........AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
.A--TC---AGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000001000000000000000000000000000
......................................................................................................AGGCTGTTTG-CAAAAATT............................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000100000000000
.....C---AGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....TC---AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2211.001000010000000000000000000000000000000000000000000000000000000000
.....C---AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2411.001000000000001000000000000000000000000000000000000000000000000000
..........GCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
................CGTGTATAAAAAGTGCCAAAAAATA............................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CGATGGACGTTGCGGCACGA..................................2011.001000000001000000000000000000000000000000000000000000000000000000
..........GCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..............CACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.........................AAAGTGCCAAAAAATAATCAGAA.....................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.A--TC---AGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...............ACGTGTATAAAAAGTGCCAAAA................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
AA--TC---AGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................AAATTTAAG-CC-CGTATAAGTG.............................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
.......................AAAAAGTGCCAAAAAATAATCAGAA.....................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.A--TC---AGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................ATTCATAATAAGTGAAAGTCC.......................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..............................GCCAAAAAATAATCAGAAAATGTT...............................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
................................CAAAAAATAATCAGAAAATGGAT..............................................................................................................................................................................................................................................2370.141000000000000000000000000000000000010000000000000000000000000000
.................................AAAAAATAATCAGAAAATGGAT..............................................................................................................................................................................................................................................22200.102000100000000010000000000000000000000000000000000000000000000000
droMoj3
AA--TC---AGCAGCACGTGTATAAAAAGTGCCAAAAAGTAATCAGAAAATGTTAGTATTATTTAACGATTTAATTCATAATACGTGAAATACAATTAACCAAGGCAGTTTG-CAAAATTTT-GCTGACAAAATTAAG-CC-AGTTTAAGTGAGCAATAGTACTAAAAACTACATTTGAAAAT-TTAA--C--CCAA-AATG--TGAAATACAAATCAAAAAGAATTTTTACACGACGACGGCGGACGTTGCGGCACGAGTGACTGGCATTGACGAA-G----------AGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2113.003000003
.....C---AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2212.002100001
.................................AAAAAGTAATCAGAAAATG.................................................................................................................................................................................................................................................1912.002100001
.A--TC---AGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2811.001000001
...............................CCAAAAAGTAATCAGAAA....................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................................ACATTTGAAAAT-TTAA--C--CC..................................................................................................1911.001000010
.......................AAAAAGTGCCAAAAAGTAATCAGAAA....................................................................................................................................................................................................................................................2611.001100000
.....C---AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2411.001000001
..........GCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2111.001100000
.....................ATAAAAAGTGCCAAAAAGTAATCAG.......................................................................................................................................................................................................................................................2511.001100000
.........AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2011.001100000
...................GTATAAAAAGTGCCAAAAAGTAATCAG.......................................................................................................................................................................................................................................................2711.001100000
................................CAAAAAGTAATCAGAAAATG.................................................................................................................................................................................................................................................2011.001100000
AA--TC---AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2711.001000001
.....C---AGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2511.001000001
AA--TC---AGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2811.001000001
.............................................................................................AATTAACCAAGGCAGTTTG-....................................................................................................................................................................................1911.001000001
..................................AAAAGTAATCAGAAAATGG................................................................................................................................................................................................................................................1911.001100000
...........CAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1911.001100000
..............................GCCAAAAAGTAATCAGAAAATG.................................................................................................................................................................................................................................................2211.001100000
...............ACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................1911.001100000
droGri2
AA--TC---AGCAGCACGTGTATAAAAAGTGCCAAATAATAATCAGAAAATGTTAGTATTATTCAACGATTTAATTCATAATATGTGAAAGACGAACTAACAAGGCAGTTTG-CAAAAATTT-GCTTGCAAAATTTAG-CC-AATTTAAGTGAGCAAGAGCATTAAAAATTGCAAACGAAAAT-TTAA--C--CCAA-AATG--TGAAACACAAAACGAAAAGAATTTTTACACGACGGC---GGACGTTGCGGCACGAGTGACTGGCGCTGACAGA-G----------AGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.A--TC---AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2311.00110
.........................AAAGTGCCAAATAATAATCAGA......................................................................................................................................................................................................................................................2211.00110
...........................................................................................................................................CC-AATTTAAGTGAGCAAG.......................................................................................................................................1811.00110
..........GCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................1911.00101
...........................AGTGCCAAATAATAATCAGAAAATG.................................................................................................................................................................................................................................................2511.00110
.A--TC---AGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2711.00101
.A--TC---AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2411.00101
................CGTGTATAAAAAGTGCCAAATAATA............................................................................................................................................................................................................................................................2511.00101
.A--TC---AGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................1811.00110
....TC---AGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................1811.00110
.........AGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2211.00101
..................................AATAATAATCAGAAAATGGA...............................................................................................................................................................................................................................................20120.08101
droAna3
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATAATCCCTAAATTAAGCGTACGAAATGTGAAAAGCAGAACGGCGATACCGCGCCGCGTCGATTCCGC-C-CGGTTT-CGGCTC-AATTCAACAGTGAAACAACAGTAAAAAATTGACTTGAAAAT-TTGTGGCCGTCAGAAATGTGTGGAACACAAAG---AAAAAA-T--TACACGACGGC---TGTCGCC----CCCGAATGACAG-CG----CCGA-GGG----------TGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......GTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2514.004010030
...ATCAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2713.003100011
.......GTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2313.003010020
.........AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2112.002001010
.....CAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................1912.002000011
.......GTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2212.002000011
......AGTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2612.002010010
.........AGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2212.002000020
....TCAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................2011.001000001
......AGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2411.001100000
.......GTAGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2411.001000010
............AGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2011.001010000
.....CAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2511.001100000
.A-ATCAGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................2311.001000001
..........GCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2211.001000010
.........AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2011.001000010
......AGTAGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2811.001000010
...ATCAGTAGCAGCACGTGTA...............................................................................................................................................................................................................................................................................1911.001000001
......AGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2211.001000010
.A-ATCAGTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2411.001000010
.A-ATCAGTAGCAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................2511.001000001
.....................................................................................................................................T-CGGCTC-AATTCAACAGTGAAACA......................................................................................................................................2411.001000001
.............................TGCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................AAT-TTGTGGCCGTCAGAAATG...........................................................................................2111.001100000
...ATCAGTAGCAGCACGTGTAT..............................................................................................................................................................................................................................................................................2011.001000001
.............GCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................1911.001000010
...............ACGTGTATAAAAAGTGCCAAA.................................................................................................................................................................................................................................................................2111.001000010
....TCAGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................2111.001000001
.A-ATCAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................2211.001000001
...ATCAGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2611.001000001
......................TAAAAAGTGCCAAATAATTTTC.........................................................................................................................................................................................................................................................2211.001010000
.......GTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2111.001010000
.A-ATCAGTAGCAGCACGTGTAT..............................................................................................................................................................................................................................................................................2111.001000001
............AGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................1911.001001000
...ATCAGTAGCAGCACGTGT................................................................................................................................................................................................................................................................................1811.001100000
.........................................................................................................................................................................ATTGACTTGAAAAT-TTGTT........................................................................................................1920.501001000
.........................................................................................................................................................................ATTGACTTGAAAAT-TTGCT........................................................................................................19200.051001000
droBip1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTCATAAAATTAAGCGTACGAAAAGTGAAAAGCAGAAAGGCAATAACGCGGGCCATCGTTTCCGG--CCGGTTT-CGG-CG-CATTACACAGTGAGACAACAGTAAAAAATCGACTTGAAAATTTTGTGGCCAACAGAAATGTGTGGAACACAAAG----AAAAA-T--TACACGACGGC---TGTCGCC----CCCGAATGACAG-CG----CCGA-GGGTG----GGAGAGSizeHit CountTotal NormTotal
No Reads
droKik1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAAAAATTTTCAGAAAATGTTAGTATAACCATTAGATTAAGCGTCCGAAATGTGGAAAGCGGCTGGGCGAACCCGCGGCCCGTCGGCATCGA--TCGGTTT-CAG-GCGAATTGCAGTGTGCGGCAATAGAGAAAATT-CGATTTGAAAT-TTCGGACGGTCGG-AATATGTGAAACACAAAGG--AAAAAA-T--TACACGACGGC---TGT--------CGCGAATGACAG-AC----C-GA-GACGGGAAGTGAGAGSizeHit CountTotal NormTotal
No Reads
droFic1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCGTAGATTAAGCGTTTAAAAAGTGAAAAGTGGTCAGGGGAAACCGCGCCCCATCGATTTGAA-AACGGTTT-GGG-AC-TATCCGAATGTGAAACAATGTAGAAAAG-GGATTTGAAAAT-TTCTGACGGTCAA-AATGAGTGGAACGCAAAAGA-AAAAAA-T--TACACG-------------------CCCGAATGATGG-TG----CAGG-GAG----------TGSizeHit CountTotal NormTotal
No Reads
droEle1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCCTAGTTTAAGCGTTCGAAATGTGGAAATCGGCTAGGTGAACCGGTGCTCTATCGATTCGGC-AACGGTTT-AGT-GC-GATTCGAGTGTGCGGCTATA-AGAAAAA-AGATTTTAAAAT-TTCTGACGGTCAG-AATGAGTGGCACGCAAAA---AAAAAA-T--TACACG-------------------CCCGAATGACAG-CG----CAGGGGAGTGTATGCGAGAGSizeHit CountTotal NormTotal
No Reads
droRho1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAAAAAATGTTAGTATATTTTATAGATTAAGCGTTCGAAATATGTGAAGCGGGCGGGCGAACCCGTGCACCATCTATACGGA-AACAGTTT-GAT-GC-GATACAAGTGTGCGGCAATATAGAAAAA-GGATTTTTAATT-TTCTGACGGTCAG-AATGAGTGGAACGCAAAAGAAAAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAGTGTGAGCGAGAGSizeHit CountTotal NormTotal
No Reads
droBia1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCA-ATAGTTTTCAAAAAATGTTAGTATATATTATAGATTAATAACTTAAAATGGAGAAAGCAGCCAGGGGAACACGTTCCCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCTTATATTAAGCGTTCGAAATGTGAAAAGCGGCTAGGGGAACTCGTGACCCATCGAATCCGA-AACGGTTT-TAG-GC-GATCCGAGAGTGCTTCAACGCAGAAAATAGCTTTTTAAAAT-TTCTGACGGTCAA-AATGAGTGGAACGCAA------AAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TGSizeHit CountTotal NormTotal
No Reads
droEug1
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATACTTTTTATATTAAGCGTTCGAAATGTGAAAAGCGTCGAGGCAAATGTGTGCCCTATTGATTCTGA-AACGGTTT-CTG-GC-GATCATTGTGTGTTTCAGTGCAGAAAAA-GGTTTTAAAAAT-TCCTGACGGTCAG-AATGAGTGAAACGCAAAG--AAAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGA-GAGTG------GGAGSizeHit CountTotal NormTotal
No Reads
dm3
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATACCCTAGATTAAGCGTTTGAAATGTAAAAAGCCGCAAGGCGATCTTGTGCCGCATCGATTCCGC-AACTGCTT-AGC-AT-AATTTCCGCGTGTTTTAATGCAAAAAAC-GCGATTTTAAAT-TTCTGACGGTCAA-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGTATGACAG-TG----CAGG-GAG----------TGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
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........................................................................................................................TCCGC-AACTGCTT-AGC-AT-AA.....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................TATAAAAAGTGCCAAATAATTTTCAGA......................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................1911.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGTAGCAGCACGTGTAT..............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................CATCGATTCCGC-AACTGCTT-A.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AAT-TTCTGACGGTCAA-AATGA..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAAAAGTGCCAAATAATTTTCA........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................AGCCGCAAGGCGATCTTGTGCCG....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAGTGCCAAATAATTTTCAG.......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAAGTGCCAAATAATTTTCA........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTATAAAAAGTGCCAAATAATTTTCA........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTGTATAAAAAGTGCCAAATAAT.............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGCCGCATCGATTCCGC-AACTGC.................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGTGTATAAAAAGTGCCAAATAA..............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GCCGCAAGGCGATCTTGTGCCG....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................TAAGCGTTTGAAATGTAAAAAG.........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............GCACGTGTATAAAAAGTGCCAAAT................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................CAA-AATGAGTGGA-----------AAAAA.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATAAAAAGTGCCAAATAATTTTA.........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................AA-T--TACACG-------------------CCCGTATGACAG-..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CTGACGGTCAA-AATGAGTGGT-----------..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............CACGTGTATAAAAAGTGCCAAATAAT.............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................CGTGTATAAAAAGTGCCAAA.................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................GTCAA-AATGAGTGGA-----------AAAA......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTCTGACGGTCAA-AATGAGTG.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...ATCAGTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GTATGACAG-TG----CAGG-GAG----------TG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................G-------------------CCCGTATGACAG-TG----CAG.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................ACCCTAGATTAAGCGTTTT.....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...ATCAGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............AGCACGTGTATAAAAAGTGCCAAA.................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAAGTGCCAAATAATTTTCAGAAAAT..................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................TTAGTATATACCCTAGATTAAGCG.........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TTTTAAAT-TTCTGACGGTCAA-AATGAGT........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCTGACGGTCAA-AATGAGTGG......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................GTATAAAAAGTGCCAAATAATT............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAAAAGCCGCAAGGCGATCTTG.........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTGCCAAATAATTTTCAGAAA....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................AGGCGATCTTGTGCCGCATCG...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................A-AATGAGTGGA-----------AAAAAA-T--................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................GCCGCATCGATTCCGC-AACTG..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......GTAGCAGCACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................GATTAAGCGTTTGAAATGTT..............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..............................................................................................GCAAGGCGATCTTGTGCCGCA..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...........................AGTGCCAAATAATTTTCA........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CCGTATGACAG-TG----CAGG-GAG----------TG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...ATCAGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................ATTCCGC-AACTGCTT-AGC-AT-A......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGTAGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGTGCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
AA-ATCAGTAGCAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................CGATTCCGC-AACTGCTT-A.............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGCCGCATCGATTCCGC-AACTG..................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................TCTGACGGTCAA-AATGAG.........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................CCCTAGATTAAGCGTTTGAAATG................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TAGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................AGCGTTTGAAATGTAAAAAGC........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTCCCTAGATTAAGCGTTCGAAATGTGAAAAGCAGCAAGGCGATCTTGTGCCGCATCGTTTCCGG-AATTGCTT-AGC-AT-AATTTCCTTGTGTTTTAATGCTAAAAAACGCGATTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................TCTGACGGTCAG-AATGAGTGG......................................................................................2118.00800000000000008000
............................GTGCCAAATAATTTTCAGAAAATGGA...............................................................................................................................................................................................................................................2614.00400000022000000000
.............................TGCCAAATAATTTTCAGAAAATGGA...............................................................................................................................................................................................................................................2513.00300000000120000000
........................AAAAGTGCCAAATAATTTTCAGAAAATGGA...............................................................................................................................................................................................................................................3013.00300000030000000000
...ATCAGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2612.00200000002000000000
......................................................................................................................TTTCCGG-AATTGCTT-AGC-AT-A......................................................................................................................................................2112.00200000000000002000
.......GTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2311.00100000000000100000
.............................TGCCAAATAATTTTCAGAAA....................................................................................................................................................................................................................................................2011.00100000000000100000
..............................GCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................1811.00100000001000000000
.................................................................TAGATTAAGCGTTCGAAATGT...............................................................................................................................................................................................................2111.00100001000000000000
...ATCAGTAGCAGCACGTGT................................................................................................................................................................................................................................................................................1811.00100000100000000000
...ATCAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2711.00100000000000010000
.........................AAAGTGCCAAATAATTTTCAGA......................................................................................................................................................................................................................................................2211.00100010000000000000
.......................................................................................................TCTTGTGCCGCATCGTTTCCG.........................................................................................................................................................................2111.00100000010000000000
..................TGTATAAAAAGTGCCAAATAATTTTCAGA......................................................................................................................................................................................................................................................2911.00100000000100000000
...............ACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................1911.00100000000001000000
.........................................................................................................................................................................................TCTGACGGTCAG-AATGAGTGGA-----------T.........................................................................2311.00100000000000001000
......AGTAGCAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................2111.00100010000000000000
.....................................................TAGTATATTCCCTAGATTAAG...........................................................................................................................................................................................................................2111.00101000000000000000
.......GTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................1911.00100000000000100000
....................TATAAAAAGTGCCAAATAATTTTCAGA......................................................................................................................................................................................................................................................2711.00100000010000000000
......AGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2211.00100000000001000000
.A-ATCAGTAGCAGCACGTGT................................................................................................................................................................................................................................................................................1911.00100000000000100000
............................................................................................................TGCCGCATCGTTTCCGG-AA.....................................................................................................................................................................1911.00100001000000000000
.....CAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................1911.00100001000000000000
.........AGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2211.00100000000000100000
.................................................................TAGATTAAGCGTTCGAAATG................................................................................................................................................................................................................2011.00110000000000000000
.....................ATAAAAAGTGCCAAATAAT.............................................................................................................................................................................................................................................................1911.00100000000000100000
...........................................................................................................................................................................................TGACGGTCAG-AATGAGTGGA-----------G.........................................................................2121.00200000000000002000
.............................................................................................................GCCGCATCGTTTCCGG-AATTGCTT-AG............................................................................................................................................................2611.00110000000000000000
..........................................................................................................................................................................................CTGACGGTCAG-AATGAGTG.......................................................................................1911.00100000000000001000
.........................................................................................................................................................................................TCTGACGGTCAG-AATGAGTGGT-----------..........................................................................2211.00100000000000001000
......AGTAGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2511.00100000000001000000
..................................................TGTTAGTATATTCCCTAGATT..............................................................................................................................................................................................................................2111.00100001000000000000
.........................................................ATATTCCCTAGATTAAGCGTT.......................................................................................................................................................................................................................2111.00100000000100000000
....................................................TTAGTATATTCCCTAGATTA.............................................................................................................................................................................................................................2011.00100001000000000000
........................AAAAGTGCCAAATAATTTTCA........................................................................................................................................................................................................................................................2111.00100010000000000000
..............................................................................................................................................................................ATTTTAAAT-TTCTGACGGTCA.................................................................................................2111.00100000000100000000
...........................AGTGCCAAATAATTTTCAGA......................................................................................................................................................................................................................................................2011.00100000010000000000
................................................................CTAGATTAAGCGTTCGAA...................................................................................................................................................................................................................1811.00100001000000000000
.A-ATCAGTAGCAGCACGTG.................................................................................................................................................................................................................................................................................1811.00100000000001000000
..............................GCCAAATAATTTTCAGAAAATGGAT..............................................................................................................................................................................................................................................2520.50100000000000100000
droSec2
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTCCCTAGATTAAGCGTTCGAAATGTGAAAAGAAGCAAGGCGATCTTGTGCCGCATCGTTTTCGG-AATTGCTT-AGC-AT-AATTTCCTTGTGTTTTAATGCAAAAAAACGCGATTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......AGTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2615.0050050
.........AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2114.0040220
.........AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2313.0030030
.........AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2013.0030030
.............GCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................1813.0030012
.A-ATCAGTAGCAGCACGTGTA...............................................................................................................................................................................................................................................................................2013.0030300
.......GTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2313.0030120
......AGTAGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2513.0030120
.....CAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2512.0020020
..........GCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2112.0020110
...........................................................................................................GTGCCGCATCGTTTTCGG-AA.....................................................................................................................................................................2011.0010100
...ATCAGTAGCAGCACGTGTA...............................................................................................................................................................................................................................................................................1911.0010001
...........CAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2011.0010100
.A-ATCAGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................2311.0010100
.......................................................................................AAAAGAAGCAAGGCGATCTT..........................................................................................................................................................................................2011.0010100
...............................................................................................................................................................................................................................................................CCGAATGACAG-TG----CAGG-GAG----------T.2111.0010100
..............................GCCAAATAATTTTCAGAAAATGGAT..............................................................................................................................................................................................................................................2511.0010010
.............GCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................1911.0010010
.......GTAGCAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................2011.0010001
...ATCAGTAGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2811.0010100
.............................TGCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................1911.0010010
..................................................................................ATGTGAAAAGAAGCAAGGCGATCTTGT........................................................................................................................................................................................2711.0010100
..............CACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................1911.0010010
................................................................................AAATGTGAAAAGAAGCAAGG.................................................................................................................................................................................................2011.0010100
.A-ATCAGTAGCAGCACGTG.................................................................................................................................................................................................................................................................................1811.0010001
........................................................................................AAAGAAGCAAGGCGATCTTG.........................................................................................................................................................................................2011.0010001
................................CAAATAATTTTCAGAAAATG.................................................................................................................................................................................................................................................2011.0010010
.....CAGTAGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2611.0010010
..............CACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................1811.0010010
.....CAGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2411.0010100
..............................GCCAAATAATTTTCAGAAA....................................................................................................................................................................................................................................................1911.0010010
............AGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................1911.0010010
.......................AAAAAGTGCCAAATAATTTTCAG.......................................................................................................................................................................................................................................................2311.0010010
.......GTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2511.0010010
..........GCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................1811.0010010
..........GCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2011.0010010
..........GCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................1911.0010001
droYak3
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCGTAGATTAAGCGTTCGAAATGTGAAAAGCCGCAAGGCGAACTCGTGCCGCATCGATTCCGC-AACTGCTT-TGC-AC-CAACTCCGGGTGTTTTAATGCAGAAAAACGCGTTTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CAGG-GAG----------TGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2118.00800000080000
.......GTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2317.00701000060000
.....CAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2514.00401000030000
.........AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2313.00300000030000
.A-ATCAGTAGCAGCACGTGT................................................................................................................................................................................................................................................................................1913.00301000020000
.........AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2013.00300000030000
.........AGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2213.00300000030000
...ATCAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................2113.00300100020000
......AGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2313.00301000020000
..............................GCCAAATAATTTTCAGAAAATGGAT..............................................................................................................................................................................................................................................2512.00210100000000
..............CACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2012.00200000020000
.....CAGTAGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2912.00200000020000
.......GTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2512.00200000020000
........TAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2212.00201000010000
..........GCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2012.00201000010000
.A-ATCAGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2612.00200000020000
.......GTAGCAGCACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................2812.00200000020000
.....CAGTAGCAGCACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................3011.00100000010000
.....CAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................1911.00100000010000
.......GTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2211.00100000010000
.A-ATCAGTAGCAGCACGTG.................................................................................................................................................................................................................................................................................1811.00100001000000
......AGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2211.00100010000000
.........AGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2511.00100000010000
...................GTATAAAAAGTGCCAAATAA..............................................................................................................................................................................................................................................................2011.00100000010000
......AGTAGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2811.00100000010000
............................GTGCCAAATAATTTTCAGAAA....................................................................................................................................................................................................................................................2111.00101000000000
...........CAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1911.00100000010000
.......GTAGCAGCACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2711.00100000010000
..........GCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2211.00100000010000
........................AAAAGTGCCAAATAATTTTCAG.......................................................................................................................................................................................................................................................2211.00100010000000
........TAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2411.00100000010000
....TCAGTAGCAGCACGTGTATA.............................................................................................................................................................................................................................................................................2011.00101000000000
...................GTATAAAAAGTGCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................2911.00100000010000
.......GTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2111.00100000010000
..............................GCCAAATAATTTTCAGAAAATGGAG..............................................................................................................................................................................................................................................2511.00100100000000
.....CAGTAGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2811.00100100000000
.........................................................ATATTTCGTAGATTAAGCGTTC......................................................................................................................................................................................................................2211.00100000100000
..............................GCCAAATAATTTTCAGAAAAT..................................................................................................................................................................................................................................................2111.00101000000000
.....................ATAAAAAGTGCCAAATAATTTTCAGA......................................................................................................................................................................................................................................................2611.00101000000000
...ATCAGTAGCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................3011.00100000010000
............AGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................1911.00100000010000
AA-ATCAGTAGCAGCACGT..................................................................................................................................................................................................................................................................................1811.00101000000000
...............ACGTGTATAAAAAGTGCCAAATAAT.............................................................................................................................................................................................................................................................2511.00100000010000
....TCAGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................2111.00100000010000
.........AGCAGCACGTGTATAAAAAGTGCCAA..................................................................................................................................................................................................................................................................2611.00100000010000
............................GTGCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................2011.00101000000000
..............................GCCAAATAATTTTCAGAAAATGGA...............................................................................................................................................................................................................................................2411.00101000000000
.....CAGTAGCAGCACGTGTAT..............................................................................................................................................................................................................................................................................1811.00100000010000
..............................GCCAAATAATTTTCAGAAAATT.................................................................................................................................................................................................................................................2211.00100010000000
......AGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2411.00100000010000
........................AAAAGTGCCAAATAATTTTCA........................................................................................................................................................................................................................................................2111.00101000000000
......AGTAGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2511.00100000010000
droEre2
AA-ATCAGTAGCAGCACGTGTATAAAAAGTGCCAAATAATTTTCAGAAAATGTTAGTATATTTCCTAGATTAAGCGTTCGAAGTGTGTTAAGACGCAAGGCGAACTCGTGCCGCATCGATTCCGC-AACTGCTT-TCC-AC-CATCTCCGTGTGTTTTAATGCAGAAAAACGCGTTTTTAAAT-TTCTGACGGTCAG-AATGAGTGGA-----------AAAAAA-T--TACACG-------------------CCCGAATGACAG-TG----CTGG-GAGTGGGAG--CGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........AGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2117.0071000510
.......GTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2316.0060000600
......AGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2415.0051000400
...ATCAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2713.0030000300
......AGTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2613.0030001200
..............CACGTGTATAAAAAGTGCCA...................................................................................................................................................................................................................................................................2012.0020000200
.....CAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2512.0021100000
......AGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2212.0020000200
.........AGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2012.0020001100
.........AGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................1912.0020000110
...............ACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................1812.0020000020
.......GTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2112.0021000100
.......GTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2212.0021000100
.......GTAGCAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................2012.0020000200
............AGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................1812.0020000020
...ATCAGTAGCAGCACGTGT................................................................................................................................................................................................................................................................................1812.0020000110
.....CAGTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................2111.0010001000
............................GTGCCAAATAATTTTCAGAA.....................................................................................................................................................................................................................................................2011.0011000000
......AGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2311.0010000100
.A-ATCAGTAGCAGCACGTGTATAA............................................................................................................................................................................................................................................................................2311.0010000010
.A-ATCAGTAGCAGCACGTGTAT..............................................................................................................................................................................................................................................................................2111.0010000100
.........AGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2311.0010001000
.......GTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2511.0010100000
...........CAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................1811.0010000010
..........GCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................1911.0010000010
..............................GCCAAATAATTTTCAGAAAAT..................................................................................................................................................................................................................................................2111.0010001000
.....CAGTAGCAGCACGTGTATAAAAAGTGC.....................................................................................................................................................................................................................................................................2711.0010001000
.......GTAGCAGCACGTGTATAAA...........................................................................................................................................................................................................................................................................1911.0010000100
...ATCAGTAGCAGCACGTGTAT..............................................................................................................................................................................................................................................................................2011.0010000100
..........GCAGCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2311.0010001000
.....................ATAAAAAGTGCCAAATAATT............................................................................................................................................................................................................................................................2011.0010100000
........TAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2211.0010000100
.............GCACGTGTATAAAAAGTGCC....................................................................................................................................................................................................................................................................2011.0010000010
.........................AAAGTGCCAAATAATTTTCAG.......................................................................................................................................................................................................................................................2111.0010001000
...ATCAGTAGCAGCACGTGTATAAAA..........................................................................................................................................................................................................................................................................2411.0010000100
................CGTGTATAAAAAGTGCCAAATAATTTTCA........................................................................................................................................................................................................................................................2911.0010000100
..........GCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................1811.0010000010
........................AAAAGTGCCAAATAATTTTCAG.......................................................................................................................................................................................................................................................2211.0010001000
.........AGCAGCACGTGTATAAAAAGTG......................................................................................................................................................................................................................................................................2211.0010000100
.....CAGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2411.0010000100
.....CAGTAGCAGCACGTGTATAAAAA.........................................................................................................................................................................................................................................................................2311.0010000100
..........GCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2011.0010000100
.........AGCAGCACGTGTATAAAAAGTGCCAAAT................................................................................................................................................................................................................................................................2811.0010000100
.......................AAAAAGTGCCAAATAATTTTCAGAAAATG.................................................................................................................................................................................................................................................2911.0011000000
............................GTGCCAAATAATTTTCAGAAA....................................................................................................................................................................................................................................................2111.0011000000
....TCAGTAGCAGCACGTGTATAAAAAGT.......................................................................................................................................................................................................................................................................2611.0010000100
...ATCAGTAGCAGCACGTGTATAAAAAG........................................................................................................................................................................................................................................................................2611.0010000010
............................GTGCCAAATAATTTTCAGAAAATGGAT..............................................................................................................................................................................................................................................2711.0011000000
..............................GCCAAATAATTTTCAGAAA....................................................................................................................................................................................................................................................1911.0011000000
.....CAGTAGCAGCACGTGTAT..............................................................................................................................................................................................................................................................................1811.0010000010

Generated: 05/18/2015 at 12:28 AM