ID:

dps_134

 Coordinate:

2:6480737-6480794 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.2 -21.6

Flybase annnotation

intron [Dpse\GA19796-in]

No Repeatable elements found

Sense Strand Reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAGTCGTACGGTGAATGTTGTGTATTGGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCAAGCCGAACCGAACCGCACCGGAAGTGGA

***********************************...............(((((((.((((((.(((((((.((.....))))))))).)))))).)))))))....(((........)))************************************ 		Read size # Mismatch Hit Count Total Norm Total M062

head

 M040

female body

 GSM444067

head

 SRR902012

CNS imaginal disc

 M059

embryo

 V112

male body		 GSM343916

embryo

 SRR902010

ovaries

 SRR902011

testis

 M022

male body
.....................................................................................TGTTAACTGTAAGACTGTGTCT................................................... 22 0 1 82830.00 82830 20962 25847 15349 5295 3778 3359 3464 2678 1381 717
.....................................................................................TGTTAACTGTAAGACTGTGTC.................................................... 21 0 1 8683.00 8683 1348 1991 1256 1700 232 526 132 673 754 71
.....................................................................................TGTTAACTGTAAGACTGTGTCC................................................... 22 1 1 6526.00 6526 4997 175 42 20 1089 22 16 59 72 34
.....................................................................................TTTTAACTGTAAGACTGTGTCT................................................... 22 1 1 6187.00 6187 5217 15 6 1 939 2 1 0 0 6
.....................................................................................TGTTAACTGTAAGACTGTGT..................................................... 20 0 1 3474.00 3474 87 902 616 570 5 587 34 246 420 7
......................................................................................GTTAACTGTAAGACTGTGTCT................................................... 21 0 1 2643.00 2643 60 2461 41 16 7 27 16 7 4 4
.....................................................................................TGTTAACTGTGAGACTGTGTCT................................................... 22 1 1 2513.00 2513 522 508 1026 46 3 330 19 4 0 55
.....................................................................................TGCTAACTGTAAGACTGTGTCT................................................... 22 1 1 1756.00 1756 1410 12 45 0 278 3 8 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGTCC................................................... 22 2 1 1491.00 1491 1235 0 0 0 256 0 0 0 0 0
.....................................................................................TTCTAACTGTAAGACTGTGTCT................................................... 22 2 1 497.00 497 426 0 0 0 71 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCTT.................................................. 23 1 1 450.00 450 12 197 70 8 4 53 29 33 44 0
.....................................................................................TGCTAACTGTAAGACTGTGTCC................................................... 22 2 1 435.00 435 361 0 0 0 74 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGTC.................................................... 21 1 1 383.00 383 327 0 0 0 56 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTG...................................................... 19 0 1 346.00 346 1 75 22 61 0 4 2 10 171 0
.....................................................................................TGTTAACTGTAAGACTGTGTCA................................................... 22 1 1 321.00 321 14 153 19 5 5 13 10 58 44 0
....................................................................................ATGTTAACTGTAAGACTGTGTCT................................................... 23 0 1 245.00 245 95 41 52 12 9 19 6 1 5 5
.....................................................................................TGTTAACTGTAAGACTGTGTCTA.................................................. 23 1 1 241.00 241 2 135 21 0 0 15 37 23 8 0
.......................................................................................TTAACTGTAAGACTGTGTCT................................................... 20 0 1 217.00 217 17 181 4 3 0 6 2 0 0 4
.....................................................................................TGGTAACTGTAAGACTGTGTCT................................................... 22 1 1 212.00 212 5 1 165 0 0 0 40 1 0 0
......................................................................................GTTAACTGTAAGACTGTGTC.................................................... 20 0 1 201.00 201 3 186 2 6 0 3 1 0 0 0
.....................................................................................TGTGAACTGTAAGACTGTGTCT................................................... 22 1 1 177.00 177 142 0 6 0 24 0 5 0 0 0
.....................................................................................TGTTAACTGTAGGACTGTGTCT................................................... 22 1 1 165.00 165 32 25 76 6 1 18 5 1 0 1
.....................................................................................TGTCAACTGTAAGACTGTGTCT................................................... 22 1 1 159.00 159 117 2 6 2 25 3 3 1 0 0
.....................................................................................TGTTAACTGTCAGACTGTGTCT................................................... 22 1 1 144.00 144 96 0 13 0 21 1 13 0 0 0
.....................................................................................TGCTAACTGTAAGACTGTGTC.................................................... 21 1 1 141.00 141 112 1 3 0 23 1 1 0 0 0
.....................................................................................TGTTAACTGTGAGACTGTGTCC................................................... 22 2 1 122.00 122 116 1 0 0 3 0 0 0 0 2
.....................................................................................TTTTAACTGTGAGACTGTGTCT................................................... 22 2 1 116.00 116 114 0 1 0 1 0 0 0 0 0
....................................................................................CTGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 115.00 115 46 40 12 6 4 2 5 0 0 0
.....................................................................................TTCTAACTGTAAGACTGTGTCC................................................... 22 3 1 108.00 108 86 0 0 0 22 0 0 0 0 0
.....................................................................................TATTAACTGTAAGACTGTGTCT................................................... 22 1 1 107.00 107 69 4 9 4 17 0 4 0 0 0
.....................................................................................TCTTAACTGTAAGACTGTGTCT................................................... 22 1 1 107.00 107 75 4 10 1 13 2 0 1 0 1
.....................................................................................TGTTAACTGTAAGAATGTGTCT................................................... 22 1 1 104.00 104 70 1 13 0 11 1 8 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGCCT................................................... 22 1 1 102.00 102 36 17 29 0 5 6 4 2 2 1
.....................................................................................TTTGAACTGTAAGACTGTGTCT................................................... 22 2 1 100.00 100 82 0 0 0 18 0 0 0 0 0
.....................................................................................TGATAACTGTAAGACTGTGTCT................................................... 22 1 1 96.00 96 2 1 84 1 1 0 6 1 0 0
.....................................................................................TGTAAACTGTAAGACTGTGTCT................................................... 22 1 1 96.00 96 77 1 2 1 15 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGCGTCT................................................... 22 1 1 90.00 90 16 16 39 3 3 3 6 2 1 1
.....................................................................................TGTTAACTGTAAGACTGTCT..................................................... 20 1 1 84.00 84 30 28 10 0 7 7 0 0 0 2
.....................................................................................TGTTGACTGTAAGACTGTGTCT................................................... 22 1 1 82.00 82 13 14 42 1 1 3 4 0 4 0
.....................................................................................TGTTAACTGTAAGACTGGGTCT................................................... 22 1 1 80.00 80 40 5 14 1 6 2 8 3 0 1
.....................................................................................CGTTAACTGTAAGACTGTGTCT................................................... 22 1 1 78.00 78 27 15 13 2 5 5 5 4 1 1
.....................................................................................TGTTAGCTGTAAGACTGTGTCT................................................... 22 1 1 72.00 72 32 15 7 0 10 3 4 1 0 0
.....................................................................................TGTTAACTGTAAGACTTTGTCT................................................... 22 1 1 71.00 71 23 28 10 0 2 0 5 0 0 3
......................................................................................GTTAACTGTAAGACTGTGT..................................................... 19 0 1 68.00 68 0 66 0 1 0 0 1 0 0 0
.....................................................................................TGTTAACTGCAAGACTGTGTCT................................................... 22 1 1 66.00 66 8 4 43 0 1 1 6 1 0 2
.....................................................................................TGTTAACTGTAAGGCTGTGTCT................................................... 22 1 1 65.00 65 9 22 15 0 2 7 10 0 0 0
.....................................................................................TTTTAACTGTCAGACTGTGTCT................................................... 22 2 1 63.00 63 55 0 0 0 8 0 0 0 0 0
.....................................................................................TGTTAACTGTAATACTGTGTCT................................................... 22 1 1 59.00 59 4 10 26 0 0 3 7 0 0 9
.....................................................................................TGTTAACTGTGGGACTGTGTCT................................................... 22 2 1 59.00 59 11 10 27 0 0 8 1 0 0 2
.....................................................................................TTTAAACTGTAAGACTGTGTCT................................................... 22 2 1 57.00 57 44 0 0 0 13 0 0 0 0 0
.....................................................................................TGTTAACTGTGAGACTGTGTC.................................................... 21 1 1 55.00 55 20 6 19 2 0 5 0 1 1 1
.....................................................................................TGTTAACTGTAAGACTGTGGCT................................................... 22 1 1 55.00 55 15 3 19 0 9 0 8 0 0 1
.....................................................................................TGTTAACTGTAAGACTGTGTCTC.................................................. 23 0 1 55.00 55 7 8 7 3 5 1 8 0 16 0
.....................................................................................TGTGAACTGTAAGACTGTGTCC................................................... 22 2 1 54.00 54 40 0 0 0 14 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACCGTGTCT................................................... 22 1 1 51.00 51 13 14 13 1 4 2 2 2 0 0
.....................................................................................TGTTAACTGTAAGACTGTTTCT................................................... 22 1 1 51.00 51 23 7 14 0 3 2 1 0 0 1
.....................................................................................TGTTAACCGTAAGACTGTGTCT................................................... 22 1 1 50.00 50 14 5 15 1 3 5 6 1 0 0
.....................................................................................TGTTTACTGTAAGACTGTGTCT................................................... 22 1 1 50.00 50 30 2 2 0 12 1 2 1 0 0
.....................................................................................TGTTAACTGTCAGACTGTGTCC................................................... 22 2 1 50.00 50 40 0 0 0 10 0 0 0 0 0
.....................................................................................TGCTAACTGTGAGACTGTGTCT................................................... 22 2 1 50.00 50 44 1 5 0 0 0 0 0 0 0
.....................................................................................TGTTAAATGTAAGACTGTGTCT................................................... 22 1 1 49.00 49 0 0 22 1 0 0 26 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCTAA................................................. 24 2 1 49.00 49 0 28 0 0 0 0 14 7 0 0
.....................................................................................TGTTAACTGTAAGTCTGTGTCT................................................... 22 1 1 48.00 48 9 0 24 1 2 0 12 0 0 0
......................................................................................GTTAACTGTGAGACTGTGTCT................................................... 21 1 1 47.00 47 1 44 2 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGC..................................................... 20 1 1 45.00 45 40 1 1 0 0 1 1 0 1 0
......................................................................................GTTAACTGTAAGACTGTGTCC................................................... 21 1 1 44.00 44 14 26 0 0 2 1 0 0 0 1
.....................................................................................GGTTAACTGTAAGACTGTGTCT................................................... 22 1 1 43.00 43 23 8 6 0 4 1 1 0 0 0
.....................................................................................TGTTAACTATAAGACTGTGTCT................................................... 22 1 1 39.00 39 12 3 12 3 2 2 4 0 1 0
.....................................................................................TGTTAACTGTAACACTGTGTCT................................................... 22 1 1 39.00 39 6 4 19 1 0 1 4 0 0 4
.....................................................................................TGTTAACTGGAAGACTGTGTCT................................................... 22 1 1 38.00 38 6 0 18 3 2 0 6 3 0 0
.....................................................................................AGTTAACTGTAAGACTGTGTCT................................................... 22 1 1 37.00 37 16 4 7 1 3 3 1 1 0 1
.....................................................................................GTTTAACTGTAAGACTGTGTCT................................................... 22 2 1 37.00 37 30 0 0 0 7 0 0 0 0 0
........................................................................................TAACTGTAAGACTGTGTCT................................................... 19 0 1 37.00 37 1 30 1 0 0 1 3 0 1 0
.....................................................................................TTCTAACTGTAAGACTGTGTC.................................................... 21 2 1 37.00 37 35 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTT.................................................... 21 1 1 36.00 36 0 8 3 3 0 1 0 2 19 0
.....................................................................................TGTTAACTGTAAGACTATGTCT................................................... 22 1 1 36.00 36 13 4 13 1 1 0 4 0 0 0
.....................................................................................TTTCAACTGTAAGACTGTGTCT................................................... 22 2 2 34.50 69 55 0 0 0 14 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTTT................................................... 22 1 1 34.00 34 4 4 12 1 3 3 7 0 0 0
......................................................................................TTTAACTGTAAGACTGTGTCT................................................... 21 1 1 33.00 33 19 2 0 1 6 1 0 0 1 3
.....................................................................................TGTTAACTGTAAGACTCTGTCT................................................... 22 1 1 33.00 33 3 7 15 0 2 3 2 1 0 0
.....................................................................................TGTCAACTGTAAGACTGTGTCC................................................... 22 2 1 32.00 32 26 0 1 0 5 0 0 0 0 0
.....................................................................................TGTTAACTGTAAAACTGTGTCT................................................... 22 1 1 31.00 31 4 4 13 0 4 1 1 1 0 3
.....................................................................................CTTTAACTGTAAGACTGTGTCT................................................... 22 2 1 30.00 30 26 0 0 0 4 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCTAAA................................................ 25 3 1 30.00 30 0 20 0 0 1 0 2 6 0 1
.....................................................................................TGTTAACTGTAAGCCTGTGTCT................................................... 22 1 1 30.00 30 0 1 21 1 0 3 4 0 0 0
.....................................................................................TGTTAATTGTAAGACTGTGTCT................................................... 22 1 1 30.00 30 5 5 11 2 2 1 3 1 0 0
.....................................................................................TGTTAACTGTACGACTGTGTCT................................................... 22 1 1 30.00 30 5 2 16 0 1 2 4 0 0 0
.....................................................................................TGTTAACTCTAAGACTGTGTCT................................................... 22 1 1 30.00 30 13 6 4 2 0 1 3 1 0 0
.....................................................................................TGTAAACTGTAAGACTGTGTCC................................................... 22 2 1 30.00 30 25 0 0 0 4 0 0 0 1 0
.....................................................................................TGTTAACTGTAAGACTGTGACT................................................... 22 1 1 29.00 29 12 2 9 0 3 1 1 1 0 0
.....................................................................................TGTTAACTGAAAGACTGTGTCT................................................... 22 1 1 28.00 28 7 3 13 1 1 1 0 1 1 0
.....................................................................................TGTTGACTGTGAGACTGTGTCT................................................... 22 2 1 28.00 28 3 5 13 0 0 5 1 0 0 1
.....................................................................................TGCTAACTGTCAGACTGTGTCT................................................... 22 2 1 27.00 27 23 0 0 0 4 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGAGTCT................................................... 22 1 1 27.00 27 5 2 15 0 0 0 3 1 0 1
.....................................................................................TTTTAACTGTAAGAATGTGTCT................................................... 22 2 1 25.00 25 18 0 0 0 7 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGT..................................................... 20 1 1 25.00 25 23 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTCTCT................................................... 22 1 1 25.00 25 4 6 10 0 0 4 1 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTATCT................................................... 22 1 1 24.00 24 2 2 14 3 0 2 1 0 0 0
......................................................................................GTTAACTGTAAGACTGTGTCTT.................................................. 22 1 1 24.00 24 0 24 0 0 0 0 0 0 0 0
....................................................................................ATGTTAACTGTAAGACTGTGTCC................................................... 23 1 1 23.00 23 19 0 0 0 4 0 0 0 0 0
.....................................................................................TCTTAACTGTAAGACTGTGTCC................................................... 22 2 1 23.00 23 15 0 1 0 6 0 0 0 0 1
.....................................................................................TGTTAACTTTAAGACTGTGTCT................................................... 22 1 1 23.00 23 3 5 9 0 1 0 0 2 0 3
....................................................................................TTGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 23.00 23 2 21 0 0 0 0 0 0 0 0
.........................................................................................AACTGTAAGACTGTGTCT................................................... 18 0 1 22.00 22 5 16 0 0 0 0 1 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCG................................................... 22 1 1 22.00 22 1 3 3 0 2 2 1 3 6 1
.....................................................................................TGTTAACTGTAAGACTGTGTCTTT................................................. 24 2 1 22.00 22 0 6 3 0 0 6 1 1 5 0
.....................................................................................TGTTAACTGTAAGACTGTGTAT................................................... 22 1 1 21.00 21 1 2 10 0 1 3 4 0 0 0
.....................................................................................TGTTAACTGTATGACTGTGTCT................................................... 22 1 1 21.00 21 2 4 12 0 0 1 2 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTGT................................................... 22 1 1 20.00 20 9 1 4 1 3 0 1 1 0 0
.....................................................................................TGTTAAGTGTAAGACTGTGTCT................................................... 22 1 1 20.00 20 12 1 4 0 1 0 2 0 0 0
....................................................................................AGGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 20.00 20 20 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGATTGTGTCT................................................... 22 1 1 19.00 19 1 0 9 5 0 1 1 0 1 1
....................................................................................GTGTTAACTGTAAGACTGTGTCT................................................... 23 1 1 19.00 19 0 19 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACGGTGTCT................................................... 22 1 1 19.00 19 8 0 7 0 2 0 2 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGAC.................................................... 21 1 1 19.00 19 13 0 0 2 4 0 0 0 0 0
.....................................................................................ATTTAACTGTAAGACTGTGTCT................................................... 22 2 1 19.00 19 17 0 0 0 2 0 0 0 0 0
.....................................................................................TGTCAACTGTAAGACTGTGTC.................................................... 21 1 1 17.00 17 13 0 1 0 2 1 0 0 0 0
......................................................................................GTTAACTGTAAGACTGTGTCA................................................... 21 1 1 17.00 17 0 16 0 0 0 0 0 1 0 0
.....................................................................................TTCTAACTGTGAGACTGTGTCT................................................... 22 3 1 17.00 17 17 0 0 0 0 0 0 0 0 0
.....................................................................................TATTAACTGTAAGACTGTGTCC................................................... 22 2 1 16.00 16 14 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGT....................................................... 18 0 1 16.00 16 0 5 1 1 0 1 0 2 6 0
.....................................................................................TGTTAACTGTAGGACTGTGTC.................................................... 21 1 1 16.00 16 7 1 5 0 0 2 0 0 0 1
......................................................................................GGTAACTGTAAGACTGTGTCT................................................... 21 1 1 16.00 16 14 0 0 0 2 0 0 0 0 0
.....................................................................................TTTGAACTGTAAGACTGTGTCC................................................... 22 3 2 15.50 31 24 0 0 0 7 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGGGTCC................................................... 22 2 1 15.00 15 9 0 1 0 5 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTA.................................................... 21 1 1 15.00 15 6 2 0 2 0 0 1 0 4 0
.....................................................................................TTTAAACTGTAAGACTGTGTCC................................................... 22 3 1 15.00 15 11 0 0 0 4 0 0 0 0 0
.....................................................................................TGTTAACTGTCAGACTGTGTC.................................................... 21 1 1 14.00 14 14 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGGGTCT................................................... 22 2 1 14.00 14 14 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGCCT................................................... 22 2 1 14.00 14 13 0 0 0 1 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGCC.................................................... 21 1 1 13.00 13 2 1 8 0 1 0 0 1 0 0
.....................................................................................TGTTTACTGTAAGACTGTGTCC................................................... 22 2 1 12.00 12 6 0 0 0 6 0 0 0 0 0
....................................................................................CTGTTAACTGTAAGACTGTGTCC................................................... 23 2 1 12.00 12 10 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACAGTGTCT................................................... 22 1 1 12.00 12 4 0 4 1 3 0 0 0 0 0
.....................................................................................TTTTAACTGTCAGACTGTGTCC................................................... 22 3 1 12.00 12 9 0 0 0 3 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACT......................................................... 16 0 1 12.00 12 0 0 0 7 0 0 0 5 0 0
.....................................................................................TGTTAACTGTTAGACTGTGTCT................................................... 22 1 1 12.00 12 1 0 5 0 0 2 4 0 0 0
.....................................................................................TGGTAACTGTGAGACTGTGTCT................................................... 22 2 1 11.00 11 0 0 11 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTGAGACTGTGTCC................................................... 22 3 3 11.00 33 33 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGCCC................................................... 22 2 1 11.00 11 10 0 0 0 1 0 0 0 0 0
.......................................................................................TTAACTGTAAGACTGTGTC.................................................... 19 0 1 11.00 11 0 8 0 1 0 1 0 0 1 0
.....................................................................................TGTTAACTGTAAGACTGTCC..................................................... 20 2 1 11.00 11 10 1 0 0 0 0 0 0 0 0
.....................................................................................TGTTAGCTGTAAGACTGTGTCC................................................... 22 2 1 11.00 11 6 0 0 0 5 0 0 0 0 0
......................................................................................GTTAACTGTAAGACTGTGTCTA.................................................. 22 1 1 11.00 11 0 11 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGAATGTGTCC................................................... 22 2 1 11.00 11 9 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCAA.................................................. 23 2 1 11.00 11 0 9 0 0 0 0 0 1 1 0
.....................................................................................TGGTAAGTGTAAGACTGTGTCT................................................... 22 2 1 11.00 11 0 0 8 0 0 0 3 0 0 0
.....................................................................................TGTTATCTGTAAGACTGTGTCT................................................... 22 1 1 11.00 11 3 1 5 0 1 0 1 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCTG.................................................. 23 1 1 11.00 11 0 11 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAGGACTGTGTCT................................................... 22 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
.....................................................................................TGGTAACTGTAATACTGTGTCT................................................... 22 2 1 10.00 10 0 0 8 0 0 0 2 0 0 0
.....................................................................................TGATAACTGTAAGACTGTGTC.................................................... 21 1 1 10.00 10 0 1 9 0 0 0 0 0 0 0
.....................................................................................TGATAACTGCAAGACTGTGTCT................................................... 22 2 1 10.00 10 0 0 9 0 0 0 1 0 0 0
....................................................................................CTGTTAACTGTAAGACTGTGTC.................................................... 22 1 1 10.00 10 3 3 0 0 0 1 0 3 0 0
......................................................................................GTTAACTGTAAGACTGTG...................................................... 18 0 1 10.00 10 0 9 0 1 0 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGACTGGGTCT................................................... 22 2 1 10.00 10 9 0 1 0 0 0 0 0 0 0
.....................................................................................TTTCAACTGTAAGACTGTGTCC................................................... 22 3 2 9.50 19 16 0 0 0 3 0 0 0 0 0
.....................................................................................CGTTAACTGTAAGACTGTGTCC................................................... 22 2 1 9.00 9 7 0 1 0 1 0 0 0 0 0
.....................................................................................TGTTACCTGTAAGACTGTGTCT................................................... 22 1 1 9.00 9 1 1 5 0 0 1 1 0 0 0
.....................................................................................TGTTAACTGTGAGGCTGTGTCT................................................... 22 2 1 9.00 9 1 3 4 0 0 0 1 0 0 0
.....................................................................................TGTTAACTGTCAGACTTTGTCT................................................... 22 2 1 9.00 9 7 0 0 0 2 0 0 0 0 0
....................................................................................CGGTTAACTGTAAGACTGTGTCT................................................... 23 2 1 9.00 9 8 0 0 0 1 0 0 0 0 0
.....................................................................................TGTTAACAGTAAGACTGTGTCT................................................... 22 1 1 9.00 9 7 0 0 0 0 1 1 0 0 0
...................................................................................TCTGTTAACTGTAAGACTGTGTCT................................................... 24 2 1 9.00 9 7 2 0 0 0 0 0 0 0 0
....................................................................................ATGTTAACTGTAAGACTGTGTC.................................................... 22 0 1 9.00 9 3 4 1 0 0 0 0 0 1 0
.....................................................................................TGGTAACTGTAAGACTGTGTC.................................................... 21 1 1 8.00 8 0 2 6 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGGCTGTGTC.................................................... 21 1 1 8.00 8 1 1 2 0 0 1 0 2 1 0
.....................................................................................TTTTAACCGTAAGACTGTGTCT................................................... 22 2 1 8.00 8 7 0 0 0 1 0 0 0 0 0
.....................................................................................CGTTAACTGTAAGACTGTGTC.................................................... 21 1 1 8.00 8 2 2 2 1 0 1 0 0 0 0
.....................................................................................TGCTAACTGTACGACTGTGTCT................................................... 22 2 1 8.00 8 6 0 1 0 1 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGA..................................................... 20 1 1 8.00 8 1 2 3 1 0 0 0 0 1 0
.....................................................................................TGTTCACTGTAAGACTGTGTCT................................................... 22 1 1 8.00 8 0 0 5 0 0 0 3 0 0 0
.....................................................................................TGTGAACTGTAAGACTGTGTC.................................................... 21 1 1 8.00 8 6 0 1 0 1 0 0 0 0 0
.....................................................................................TGTTAACTGTAATACTGTGTC.................................................... 21 1 1 8.00 8 0 2 5 0 0 1 0 0 0 0
.....................................................................................TTTTAACTGTAAGGCTGTGTCT................................................... 22 2 1 7.00 7 6 0 0 0 1 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGAATGTGTCT................................................... 22 2 1 7.00 7 5 0 1 0 1 0 0 0 0 0
.....................................................................................TGCTAACTCTAAGACTGTGTCT................................................... 22 2 1 7.00 7 6 0 0 0 1 0 0 0 0 0
.....................................................................................TGTTAACTGTAGGACTGTGTCC................................................... 22 2 1 7.00 7 5 1 0 0 1 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGACTGTTTCT................................................... 22 2 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.......................................................................................TTAACTGTAAGACTGTGTCC................................................... 20 1 1 7.00 7 5 1 0 0 1 0 0 0 0 0
....................................................................................ATGTTAACTGTAAGACTGTGT..................................................... 21 0 1 7.00 7 1 0 2 0 0 2 0 1 1 0
.....................................................................................TGTTAACTGTAAGGCTGTGTCC................................................... 22 2 1 7.00 7 6 0 0 0 1 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGACT................................................... 22 2 1 7.00 7 3 1 0 0 3 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGACTGTGTCA................................................... 22 2 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTTTCT................................................... 22 2 1 7.00 7 4 0 0 0 3 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGGCC................................................... 22 2 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.....................................................................................AGTTAACTGTAAGACTGTGTCC................................................... 22 2 1 7.00 7 6 0 1 0 0 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGACTTTGTCT................................................... 22 2 1 7.00 7 5 0 0 0 2 0 0 0 0 0
.....................................................................................TTTTTACTGTAAGACTGTGTCT................................................... 22 2 1 7.00 7 6 0 0 0 1 0 0 0 0 0
.....................................................................................TTTGAACTGTAAGACTGTGTC.................................................... 21 2 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.....................................................................................TGTAAACTGTAAGACTGTGTC.................................................... 21 1 1 7.00 7 5 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAAATGTAAGACTGTGGCT................................................... 22 2 1 7.00 7 0 0 4 0 0 0 3 0 0 0
.....................................................................................TGTTAACGGTAAGACTGTGTCT................................................... 22 1 1 7.00 7 1 0 4 0 0 1 1 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGC..................................................... 20 2 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTAA................................................... 22 2 1 6.00 6 0 4 0 0 0 0 0 2 0 0
.....................................................................................TGCTAACTGTAAGACTGTGT..................................................... 20 1 1 6.00 6 3 0 3 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGTCTT.................................................. 23 2 1 6.00 6 4 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTATGTCC................................................... 22 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACCGTAAGACTGTGTCC................................................... 22 2 1 6.00 6 4 0 0 0 2 0 0 0 0 0
.....................................................................................TATTAACTGTAAGACTGTGTC.................................................... 21 1 1 6.00 6 5 0 0 0 0 1 0 0 0 0
....................................................................................ATCTTAACTGTAAGACTGTGTCT................................................... 23 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCAAA................................................. 24 3 1 6.00 6 0 6 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTTTGTC.................................................... 21 1 1 6.00 6 1 4 0 0 0 0 0 1 0 0
.....................................................................................TTTTAGCTGTAAGACTGTGTCT................................................... 22 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0
......................................................................................GTTAACTGTAAGACTGTCT..................................................... 19 1 1 6.00 6 0 6 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTGAGACTGTGT..................................................... 20 1 1 6.00 6 0 0 4 0 0 2 0 0 0 0
.....................................................................................TTTTAACTGTAAGAATGTGTCC................................................... 22 3 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.....................................................................................TGCTATCTGTAAGACTGTGTCT................................................... 22 2 1 6.00 6 4 0 0 0 2 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGGCT................................................... 22 2 1 6.00 6 4 0 0 0 2 0 0 0 0 0
....................................................................................ATGTTAACTGTGAGACTGTGTCT................................................... 23 1 1 6.00 6 2 1 2 0 0 1 0 0 0 0
.....................................................................................TGTTAACTGCAAGACTGTGTC.................................................... 21 1 1 6.00 6 0 2 1 0 1 0 1 0 1 0
.....................................................................................TGTTAACTGTAAGACTTTGTCC................................................... 22 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0
......................................................................................TTTAACTGTAAGACTGTGTCC................................................... 21 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTGAGACTGTGTC.................................................... 21 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.....................................................................................TGTCAACTGTGAGACTGTGTCT................................................... 22 2 1 6.00 6 2 0 3 0 0 1 0 0 0 0
.....................................................................................TGGTAACTGGAAGACTGTGTCT................................................... 22 2 1 6.00 6 0 0 5 0 0 0 1 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTTTCC................................................... 22 2 1 6.00 6 4 0 0 0 2 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTCT..................................................... 20 2 2 5.50 11 9 0 0 0 2 0 0 0 0 0
.....................................................................................TGATAACTGGAAGACTGTGTCT................................................... 22 2 1 5.00 5 0 0 1 0 0 0 4 0 0 0
.....................................................................................ATTTAACTGTAAGACTGTGTCC................................................... 22 3 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGTCTGTGTCT................................................... 22 2 1 5.00 5 1 0 2 0 0 0 2 0 0 0
.....................................................................................TTTTGACTGTAAGACTGTGTCT................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAACACTGTGTCT................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................TGCTAACTGTAGGACTGTGTCT................................................... 22 2 1 5.00 5 3 0 2 0 0 0 0 0 0 0
.....................................................................................TGCTAACTGTGAGACTGTGTCC................................................... 22 3 2 5.00 10 10 0 0 0 0 0 0 0 0 0
.....................................................................................TCTTAACTGTAAGACTGTGTC.................................................... 21 1 1 5.00 5 4 0 1 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGAGTGTGTCT................................................... 22 1 1 5.00 5 1 0 1 0 0 1 2 0 0 0
......................................................................................GGTAACTGTAAGACTGTGTCC................................................... 21 2 1 5.00 5 4 0 0 0 1 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTTTGTCT................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGGAAGACTGTGTCT................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................TGATAACTGTAAGACTGTGT..................................................... 20 1 1 5.00 5 0 0 5 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTTTC.................................................... 21 1 1 5.00 5 3 0 0 0 1 0 1 0 0 0
.....................................................................................TGTTAACTGTAAGACCGTGTCC................................................... 22 2 1 5.00 5 4 0 0 0 0 0 0 1 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCTTTT................................................ 25 3 1 5.00 5 0 0 0 0 0 0 0 0 5 0
.....................................................................................TGTTAACTGTAAGACTGTATCC................................................... 22 2 1 5.00 5 4 0 0 0 1 0 0 0 0 0
.....................................................................................TGGTAACTGTAGGACTGTGTCT................................................... 22 2 1 5.00 5 0 0 4 0 0 0 1 0 0 0
.....................................................................................TGTTAACTGTAAGACTGCGTC.................................................... 21 1 1 5.00 5 0 0 3 1 0 0 0 1 0 0
.....................................................................................TGTTAACTGTAATACTGTGT..................................................... 20 1 1 5.00 5 0 0 5 0 0 0 0 0 0 0
.....................................................................................TGTGAACTGTGAGACTGTGTCT................................................... 22 2 1 5.00 5 4 0 0 0 0 0 1 0 0 0
....................................................................................CTGTTAACTGTGAGACTGTGTCT................................................... 23 2 1 5.00 5 1 0 3 0 0 1 0 0 0 0
.....................................................................................TGTTTACTGTAAGACTGTGTC.................................................... 21 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................TGGTAACTGTAAGACTGTCTCT................................................... 22 2 1 5.00 5 0 0 4 0 0 0 1 0 0 0
.....................................................................................TGTTAACTGCAAGACTGTGTCC................................................... 22 2 1 5.00 5 3 0 1 0 1 0 0 0 0 0
.....................................................................................CTTTAACTGTAAGACTGTGTCC................................................... 22 3 1 5.00 5 4 0 0 0 1 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGTCTGGGTCT................................................... 22 2 1 5.00 5 0 0 3 0 0 0 2 0 0 0
.....................................................................................TTTTAACTGTAAGACTGTGTCA................................................... 22 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTAC................................................... 22 2 1 5.00 5 3 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCCA.................................................. 23 2 1 5.00 5 0 2 2 0 0 0 1 0 0 0
.....................................................................................TGTTAACTGCGAGACTGTGTCT................................................... 22 2 1 5.00 5 1 0 4 0 0 0 0 0 0 0
.....................................................................................GGTTAACTGTAAGACTGTGTCC................................................... 22 2 1 5.00 5 3 0 0 0 2 0 0 0 0 0
.....................................................................................TGTTAACCGTAAGACTGTGT..................................................... 20 1 1 4.00 4 1 0 1 0 0 1 0 0 1 0
.....................................................................................TGCTAACTGTAAGACTGTCT..................................................... 20 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTCTAAGACTGTGTCT................................................... 22 2 1 4.00 4 3 0 0 0 1 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGCGT..................................................... 20 1 1 4.00 4 0 0 1 0 0 0 1 0 2 0
.....................................................................................TGTTAACTGTAAGTCTGTGTCC................................................... 22 2 1 4.00 4 3 0 0 0 0 0 1 0 0 0
.....................................................................................TGCTGACTGTAAGACTGTGTCT................................................... 22 2 1 4.00 4 2 0 1 0 0 0 1 0 0 0
....................................................................................CTGTTAACTGTAAGACTGTGT..................................................... 21 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTCTAAGACTGTGTCC................................................... 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................TTAACTGTAAGACTGTGT..................................................... 18 0 1 4.00 4 0 3 0 1 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCCC.................................................. 23 1 1 4.00 4 0 0 0 0 0 0 0 0 4 0
.....................................................................................TGTTAACTGTAAGCCTGTGT..................................................... 20 1 1 4.00 4 0 0 1 1 0 1 0 1 0 0
.....................................................................................TGTTAAATGTAAGTCTGTGTCT................................................... 22 2 1 4.00 4 0 0 0 0 0 0 4 0 0 0
..................................................................................ATCTGTTAACTGTAAGACTGTGTCT................................................... 25 3 1 4.00 4 3 1 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACCGTGTC.................................................... 21 1 1 4.00 4 3 0 0 0 0 0 0 1 0 0
.....................................................................................TGTGAACTGTAAGACTGTGGCT................................................... 22 2 1 4.00 4 0 0 3 0 0 0 1 0 0 0
.....................................................................................TGATAACTGTAAGTCTGTGTCT................................................... 22 2 1 4.00 4 0 0 3 0 0 0 1 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCTTAA................................................ 25 3 1 4.00 4 0 2 0 0 0 0 0 0 2 0
.....................................................................................TGTTAGCTGTAAGACTGTGTC.................................................... 21 1 1 4.00 4 2 1 1 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTCTGTC.................................................... 21 1 1 4.00 4 1 0 2 0 0 0 0 1 0 0
......................................................................................GTTAACTGTAAGGCTGTGTCT................................................... 21 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTGC................................................... 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGGGTCC................................................... 22 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TGCTAACTGCAAGACTGTGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCCT.................................................. 23 2 1 4.00 4 2 1 0 0 0 1 0 0 0 0
......................................................................................GTTGACTGTAAGACTGTGTCT................................................... 21 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGACTGTGTCTT.................................................. 23 2 1 4.00 4 3 0 0 0 1 0 0 0 0 0
.....................................................................................TCTTAACTGTAAGACTGTGT..................................................... 20 1 1 4.00 4 1 0 1 1 0 1 0 0 0 0
..................................................CATAGTCGTACGGTGAATGTT....................................................................................... 21 0 1 4.00 4 0 3 1 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTGCGTCT................................................... 22 2 1 4.00 4 3 0 0 0 1 0 0 0 0 0
......................................................................................GTTAACTGTAAGACTGTGTCAA.................................................. 22 2 1 4.00 4 0 4 0 0 0 0 0 0 0 0
......................................................................................GTTAACTGTAGGACTGTGTCT................................................... 21 1 1 4.00 4 0 3 1 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTGTCTTA................................................. 24 2 1 4.00 4 0 0 0 1 1 0 0 0 2 0
.....................................................................................TGGTAACTGAAAGACTGTGTCT................................................... 22 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0
.....................................................................................TTTTAACTGTAAGACTATGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TGCTAACCGTAAGACTGTGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGCGTCC................................................... 22 2 1 4.00 4 2 0 1 0 1 0 0 0 0 0
.....................................................................................TTTTAACTGCAAGACTGTGTCT................................................... 22 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
......................................................................................GTTAGCTGTAAGACTGTGTCT................................................... 21 1 1 4.00 4 0 2 1 0 0 1 0 0 0 0
.....................................................................................TGTTAACTGTACTACTGTGTCT................................................... 22 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0
.....................................................................................TGATAACTGTGAGACTGTGTCT................................................... 22 2 1 4.00 4 0 0 4 0 0 0 0 0 0 0
......................................................................................TGTAACTGTAAGACTGTGTCT................................................... 21 2 2 4.00 8 3 0 2 1 2 0 0 0 0 0
.....................................................................................TGCTAACTGTAAGACTGTGC..................................................... 20 2 1 4.00 4 3 0 0 0 1 0 0 0 0 0
.......................................................................................TTAACTGTGAGACTGTGTCT................................................... 20 1 1 4.00 4 0 3 0 0 0 1 0 0 0 0
.....................................................................................GTTTAACTGTAAGACTGTGTCC................................................... 22 3 2 3.50 7 5 0 0 0 2 0 0 0 0 0
.....................................................................................TGATAAATGTAAGACTGTGTCT................................................... 22 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.....................................................................................TGTGAACTGGAAGACTGTGTCT................................................... 22 2 1 3.00 3 0 0 0 0 0 0 3 0 0 0
.....................................................................................TGTTAACTGTAATACTTTGTCT................................................... 22 2 1 3.00 3 0 0 1 0 0 0 2 0 0 0
.....................................................................................TGGTATCTGTAAGACTGTGTCT................................................... 22 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTT...................................................... 19 1 1 3.00 3 0 2 1 0 0 0 0 0 0 0
.....................................................................................TGTTAACTGTAAGACTGTATC.................................................... 21 1 1 3.00 3 0 0 1 1 0 1 0 0 0 0
.....................................................................................TGCTAACTGTAAGGCTGTGTCT................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATCAGCATGCCACTTACAACACATAACCTGGTTACAATTGACATTCTGACACAGAGCCACCAACAGTCGGTTCGTCGTTCGGCTTGGCTTGGCGTGGCCTTCACCT

************************************...............(((((((.((((((.(((((((.((.....))))))))).)))))).)))))))....(((........)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body
.......................................................................................................................CGGATCGTCGTTCGGGGTGG................... 20 3 7 0.43 3 3
........................................................................................................................GGGTCGTCGTGCGGCTTG.................... 18 2 13 0.08 1 1
.......................................................................................................................CGGATCGTCGTTCGGGGTG.................... 19 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 2:6480687-6480844 - dps_134 candidate-rescued NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC-----------------------AAGCAGCAA---------------------------------GC-------------------------------------------------------------CGAACCGA--------------------ACCG---CACCGGA---------------------------------AGTGGA
droPer2 scaffold_0:305992-306094 - --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC-----------------------AAGCAGCAA---------------------------------G------------------------------------------------------------------CCGA--------------------ACCG---AACCGGA---------------------------------AGTGGA
droWil2 scf2_1100000004943:11672689-11672792 - --------------------------------------------------CATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------AAACAACAATA-------------------------------G------CTGGAACT------------------------------------------------------------------------------CC---AATC-------------------------------------AAGGA
droVir3 scaffold_12822:3936742-3936822 - dvi-mir-999 Known_mirbase --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCT-----------------------AATCAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:17209647-17209726 - --------------------------------------------------CATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGC-AGCC-----------------------AAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_8129:760-868 - --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCC-----------------------AAGCAACAA---------------------------------AC----GAT---------------------------------------------------------GACCA--------------------CCCA---AAACGGA---------------------------------AGCCAA
droAna3 scaffold_13340:8622427-8622590 - --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATCTCACTATCCTGCCAGC------------------------CAGCAAGCCAGCCAGCCCC---ACCAAATA---------------------------------------------ATCGCATCGAA-------------------ACCC---AACCGGATAC---------------------GAGTA----TGTGGA
droBip1 scf7180000396708:225059-225214 + --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATCCCACTATCCTGCCAGCCAGCC--------------------------------AGCCCC---ACCAAATA---------------------------------------------ATCGCATCGAA-------------------ACCC---AACCGGATAC---------------------GAGCA----TGTGGA
droKik1 scf7180000302388:1458288-1458451 + --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACATGAAGCAAGTGGAGATTGGAGAG--------------------TGAA-A----------------AGT------------------------------GGAGAGTGGTGAGTGGAAGAGTGGC-AACCC---AACCGGATAT---------------------GGGTA----TGTGGA
droFic1 scf7180000454106:760275-760467 - --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CATCAACAATGGCCCAGC----ATTAGCCAGCGAC----------------TCAACC----------------ATC-----GCATCCCATCGCATCGTATCCTATCGTATCGTAGCGAATCGAATCGAGTCGAGCAC---AACCGGATGTATA-------------------GCTA----CGTGGA
droEle1 scf7180000491212:2051670-2051834 - --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCC-------------------CAGCAATAC--------------------------------AA---T-GTATCCAC-------ATCGA-----TTT-----GTATCGCAGCGCATCGTATCCTATAGCATCGA--------------------ACCC---AACCGGATATATG-------------------GGTA----TGTGGA
droRho1 scf7180000767858:1822-1984 + --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACAC--------------------------------AA---TCGTATCCAC--------------------------------ATCGAATCGTATCCTATCGCATCGA--------------------ACCC---AACCGGATATATGGATA---TATGGAGACATGGGTG----TGTGGA
droBia1 scf7180000302402:6491290-6491439 + --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACAG--------------------------------AA------------------------------------TCGCATCCTATCCCCAGGCCGCATATCGCATCGA--------------------ACCC---AACCGGATGTATG-------------------GGTAGGTGTGTGGA
droTak1 scf7180000415711:1522779-1522922 + --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT-----------------------CAGCAACAA--------------------------------A----A-GTACCAACT------------------C-----GTATC----------CTATCCTATCGCATCGA--------------------ACCC---AACCGGATGTATA-------------------AGTA----TGTGGA
droEug1 scf7180000409490:921749-921915 - --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACAATA-------------------------------ACAAT-GTATCAACT------------------C-----GAA------ATCATCGTATCCTA-----TCGA--------------------ACCC---AAACGGATATATATATACCCTCAGTATATATAGATA----TGTGGA
dm3 chr3R:17623846-17624029 - dme-mir-999 Known_mirbase --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACAC--------------------------------AGCCCA-GTATCAACTATACGGATCGCTTCCCTTCGCATCGCATCGCATCGCTTTGAATCCTATCGCATCGCA-------------------GC-CAA-AACCGGATGTATAT------------------GGTA----TGTGGA
droSim2 3r:17135727-17135911 - dsi-mir-999 Known_mirbase --------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACAC--------------------------------AGCCCA-GTATCAACTATACGGATCGCTTCCCTTCGCATCGCATCGCATCGCTTTGAATCCTATCGCATCGCA-------------------GC-CAAAAACCGGATGTATAT------------------GGTA----TGTGGA
droSec2 scaffold_0:17996218-17996397 - --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACAC--------------------------------AGCCCA-GTATCAACTATACGGATCGCTTCCCTTC-----GCATCGCATCGCTTTGAATCCTATCGCATCGCA-------------------GC-CAAAAACCGGATGTATAT------------------GGTA----TGTGGA
droYak3 3R:18443829-18444021 - --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACAC-------------------CAGCCACATCAGCCACATCG------GCCA-CAAAC----CAGCTCA-GTATCGCAA----------------CTT-----GGATCGCAACGCATTGAATGCTATCGCAACGCA-------------------GC-CAAAAACCGGATGTGTAT------------------GGTATGTGTATGGA
droEre2 scaffold_4820:10463241-10463421 + --------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACACCAGCCACACCA------GCCA-CA--G----CAGCCCA-GTATCAACA----------------CTC-----GGATCGCAACGCAGTGAATCCTATCGCTTCGCA-------------------GCCA---AACCGGATGTGTGC------------------GGTA----TGTGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC-----------------------AAGCAGCAA---------------------------------GC-------------------------------------------------------------CGAACCGA--------------------ACCG---CACCGGA---------------------------------AGTGGASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................22182830.0082830717258473778209623464153493359267813815295
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2118683.008683711991232134813212565266737541700
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2216526.0065263417510894997164222597220
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................2013474.003474790258734616587246420570
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2112643.002643424617601641277416
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................231450.00450019741229705333448
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................191346.003460750122241017161
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................221321.00321015351410191358445
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................231245.00245541995652191512
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231241.002410135023721152380
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................201217.002174181017246003
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................201201.00201018603123006
........................................................................................GTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................19168.006806600100001
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................23155.005508578710163
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24149.0049028001400700
.......................................................................................TGTTAACTGTAAGACTGTGC..................................................................................................................................................................................................................................20145.004501040111010
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................21144.0044126214001000
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19137.003703001311010
.......................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................................................................................................................................................................21136.003608000312193
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................25130.003012010200600
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................22124.002402400000000
......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................23123.002300419000000
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18122.002201605100000
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................22122.00221321132360
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24122.00220600136150
........................................................................................GTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................21117.001701600000100
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................18116.00160500011261
.......................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................................................................................................................................................................21115.00150206100042
.......................................................................................TGTTAACTGTAAGACT......................................................................................................................................................................................................................................16112.00120000000507
.........................................................................................TTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................19111.00110800001011
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................20111.001101010000000
........................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................22111.001101100000000
.......................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................23111.00110900000110
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23111.001101100000000
........................................................................................GTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................18110.00100900000001
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2219.0090403010010
.......................................................................................TGTTAACTGTAAGACTGTGA..................................................................................................................................................................................................................................2018.0080201030011
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2017.0070115000000
......................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................2117.0070001022110
.......................................................................................TGTTAACTGTAAGACTGTGTAA................................................................................................................................................................................................................................2216.0060400000200
.......................................................................................TGTTAACTGTAAGACTGTGTCAAA..............................................................................................................................................................................................................................2416.0060600000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTTT.............................................................................................................................................................................................................................2515.0050000000050
.......................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................................................................................................................................................................2215.0050023000000
.......................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................................................................................................................................................................2315.0050200120000
.........................................................................................TTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................1814.0040300000001
.......................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................................................................................................................................................................2514.0040200000020
.......................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................................................................................................................................................................2214.0040004000000
.......................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................................................................................................................................................................2314.0040102001000
..................................................CATAGTCGTACGGTGAATGTT......................................................................................................................................................................................................................................................................2114.0040300010000
........................................................................................GTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................2214.0040400000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTA..............................................................................................................................................................................................................................2414.0040010000021
.......................................................................................TGTTAACTGTAAGACTGTT...................................................................................................................................................................................................................................1913.0030200010000
droPer2
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCC-----------------------AAGCAGCAA---------------------------------G------------------------------------------------------------------CCGA--------------------ACCG---AACCGGA---------------------------------AGTGGASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................22150473.005047369954956116115536160155810
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2114470.0044703153494512681944549
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................2013077.0030779154115831385935
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................221737.00737520438487345
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................211676.00676124924503484
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................231327.00327624149110785
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................231214.0021438116459024
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................221209.0020918491681
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................221152.001522462286212
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231134.0013411472518267
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................201133.00133793601044
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................19159.005901208345
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................20140.00400290137
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................23134.00340304261
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18134.00342160232
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................18127.00271641213
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19123.0023761522
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24123.00230149000
........................................................................................GTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................19123.00230170114
.......................................................................................TGTTAACTGTAAGACTGTGC..................................................................................................................................................................................................................................20115.00152001102
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................25114.0014275000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24111.0011100424
.......................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................................................................................................................................................................21110.0010000451
.......................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................................................................................................................................................................2119.009020151
.......................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................2318.008070010
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2017.007700000
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................2317.007020140
.......................................................................................TGTTAACTGTAAGACTGTGA..................................................................................................................................................................................................................................2017.007000421
......................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................2116.006000213
.......................................................................................TGTTAACTGTAAGACTGTC...................................................................................................................................................................................................................................1915.005210002
.........................................................................................TTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................1915.005120011
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2215.005050000
........................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2214.004030010
.........................................................................................TTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................1814.004020002
.......................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................................................................................................................................................................2314.004031000
droWil2
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------AAACAACAATA-------------------------------G------CTGGAACT------------------------------------------------------------------------------CC---AATC-------------------------------------AAGGASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................221482108.00482108354576914074671599494931
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................22131935.003193531701281749140
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................2215759.00575957480236
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2114948.004948396968107179625
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2013791.003791357272817122
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2311888.00188841130452371165
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2111631.0016313718831924334
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2311033.00103377591684149
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231848.008481054922345327
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................201509.005095297761310
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................201342.003423420000
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................191321.00321248103258
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................181203.0020314343548
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................221104.0010438101946
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................20188.0088880000
......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................23180.0080790010
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24177.0077604859
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24167.0067051601
.........................................................................................TTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................20166.0066651000
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................23137.00371610515
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................25130.0030072210
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................21128.0028271000
..........................................................................................TAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................19128.0028280000
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................18124.0024184110
.........................................................................................TTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................19121.0021190002
......................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................23118.0018180000
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................22118.001819026
.......................................................................................TGTTAACTGTAAGACTGTCG..................................................................................................................................................................................................................................20118.0018180000
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23117.0017420011
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................22117.0017100034
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................19116.001661117
...........................................................................................AACTGTAAGACTGTGTCC................................................................................................................................................................................................................................18114.0014131000
.......................................................................................TGTTAACTGTAAGACTGTGTGG................................................................................................................................................................................................................................22113.0013130000
.......................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................................................................................................................................................................22113.0013130000
.......................................................................................TGTTAACTGTAAGACTGTGG..................................................................................................................................................................................................................................20112.0012110001
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2019.00926001
.......................................................................................TGTTAACTGTAAGACTGTC...................................................................................................................................................................................................................................1918.00850111
.......................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................................................................................................................................................................2317.00740201
.....................................................................................AATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2416.00660000
.......................................................................................TGTTAACTGTAAGACTGTGTTCT...............................................................................................................................................................................................................................2316.00600015
..........................................................................................TAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................1916.00660000
.......................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................................................................................................................................................................2116.00610005
.......................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................................................................................................................................................................2215.00550000
.......................................................................................TGTTAACTGTAAGACTGTGTAA................................................................................................................................................................................................................................2215.00520210
..........................................................................................TAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................1815.00550000
.......................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................................................................................................................................................................2415.00510013
.......................................................................................TGTTAACTGTAAGACTGTGTTC................................................................................................................................................................................................................................2215.00550000
droVir3
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCT-----------------------AATCAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................221507491.0050749114535103173129494499420137670110348373964291907132727141433493107911505254949201177113678072420341691124314475641620907321700164588391240970247511039167535181048821767144290717671371825108584451534830757178304314395412769681206520145122917152231692270515116128282116414697755218848186553740139539
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................22110087.001008712564991220005710287103222010014311463101415121028528179113100000000000110100015229704122318290535432276237354851114146
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2317866.0078662154416012174323744715587510325201401100318214486225155252212391471115322027819719314100000000000000000191261307053669653280908366717596219242247395463
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2115111.005111248437721792623222138951729281811312013381424391524392756573585362729451926153916742976133141371045320451024664051231537416215615311310415711410610599234233
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2314027.0040273776428562412118146471141562653924144820119306079565210010930318354212416276478111020201001010011002470211580584723921813211411274799396654655134144
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................2212008.00200857154000000000000100000000000011101000000011410022202004210208200146020673263428173647216214841
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................2411837.0018370080185401424239693101000020046392969286511492154123227799940000000000000000000333201991371254471002553245407476
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2311786.0017861548115370196589131239410164314155136734732213542110011012628832310430107932073756738118115505996831715144443
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2111384.0013847687419105010113166631362313334242247273411041111011010000000021521260233546263932251430211114103035
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................2011340.00134012716323881814903143014421562417738783115511397425141345900000000100000000000416242012154340150200221013103025
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................2211192.001192199115014210005421021113181272295241124015181817193001000010010000000151960153218224856744354348429787
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................2511086.001086001801001008011225000001000183617651922025412875168318930000000000000000000300030891112160011101319214044
.......................................................................................TGTTAACTGTAAGACTGTGTCTTA..............................................................................................................................................................................................................................241560.0056000110000000000000000000001100000002010000001211000000000001100002103934017211810971121406787
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................201553.005539378402021001001001000111111000100000000011010000000000000630006300077212204164830223
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................231268.0026810406149105202123001113016114418710223100011324000000000000000000061120131115312312512756
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................241226.00226055010533500322114101232319833337037335100000000000000000001978025584710658231447
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................191148.00148033001030610001102005000001210161226060100090010001020000000013010001142002113200121
.......................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................................................................................................................................................................241123.001232221121002001000000070131000103390300000600100000000000000000100003624655101114040
.......................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................231109.00109002010000000000000000002335203001024554000000000000000000001000402613300100133354
.......................................................................................TGTTAACTGTAAGACTGTGTCTCC..............................................................................................................................................................................................................................241109.0010991401910000000000000110020102110211030000390000000000000000000002000010211045400000
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23199.009901202050201000000000300711101201102303400000000000000000000090010139100100012478
.......................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................................................................................................................................................................25172.007200200000000000000000001002520000703610620000000000000000000000000394101110010230
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19170.0070119110201001001030000000221000000000000100000000000000000010001003031244302000001
......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................23166.006625707000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18163.006301370103000000010000000010010000000110100000000000000000010002100055300322420012
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................20161.006115703000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................................................................................................................................................................23157.00570000000010001000000030030110100100233100000000000000000000001000079200000002357
.......................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................................................................................................................................................................24155.005500001020000000000000100132100300102152200000000000000000000100000710000000031123
.......................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................................................................................................................................................................23149.00490000000000000000000000000010000000010020000000000000000000001000042158114611424
.......................................................................................TGTTAACTGTAAGACTGTGTCTTTA.............................................................................................................................................................................................................................25144.00440000000010000000000000000110000010231000000000000000000000010000025039205110131
.......................................................................................TGTTAACTGTAAGACTG.....................................................................................................................................................................................................................................17144.004400000000000000000000000000000000000000000112120211310033021200000021100000030020
.......................................................................................TGTTAACTGTAAGACTGTGTCTCA..............................................................................................................................................................................................................................24136.00360000011000011000000010011011000000043032000000000000000000020000013400010011002
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................18134.00340600001000000100000000101001210000010001000000000000000000003000033401000100012
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................22129.002901202000000000001010000000000000000000000000000000000000000005001000012130000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTTT.............................................................................................................................................................................................................................25124.00240010001000000000010000210114000001010000000000000000000000001000010111200000021
.......................................................................................TGTTAACTGTAAGACTGTGTCTATA.............................................................................................................................................................................................................................25122.00220000000000101000000000000100000010000010000000000000000000000000045110011020011
......................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................23120.002001800000000000000000000000000000000000000000000000000000000000000000001010000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTCAA.............................................................................................................................................................................................................................25117.00170000000000001000000000000001100020131120000000000000000000010000000000000011001
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................20116.001601302000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................21114.00141931000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................22114.00140050000010001000000000000000000000000000000000000000000000001000002200000020000
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................20113.00130061000000000000001000000000000000000000000000000000000000001000001020100000000
.......................................................................................TGTTAACTGTAAGACTGTGTCAAA..............................................................................................................................................................................................................................24213.00260020000000000000000000020000000020007020000000000000000000000000033200000001002
.........................................................................................TTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................20112.001201200000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTAA................................................................................................................................................................................................................................22112.00120000000000000000000010000000000100001100000000000000000000000000012300000000011
.......................................................................................TGTTAACTGTAAGACTGTGTCTCCC.............................................................................................................................................................................................................................25110.00104000010000000000000010000000010000000000000000000000000000000100000000002000000
............................................................................................ACTGTAAGACTGTGTCT................................................................................................................................................................................................................................17110.00100000000000000000000000000000000000000000000000000000000101000000111200000020001
.......................................................................................TGTTAACTGTAAGACTGTGTCTTCA.............................................................................................................................................................................................................................25110.00100000000000000000000000000000000100010000000000000000000000000000000020100100220
.......................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................................................................................................................................................................24110.00100000001000000000000000000000000000000020000000000000000000000000020120000010010
.......................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................................................................................................................................................................21110.00100000000000000100010000000000000000010000000000000000000000003100010020000000000
........................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2219.0090020000000101200000000000000000000000010000000000000000000000001000000000000001
.......................................................................................TGTTAACTGTAAGACTGTGA..................................................................................................................................................................................................................................2019.0090000000101000000000000000000010000000000000000000000000000002000010000000011100
.......................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................................................................................................................................................................2419.0090010000000000000000000000000001000000000000010000000000000001000000000010010120
.......................................................................................TGTTAACTGTAAGACTGTGG..................................................................................................................................................................................................................................2019.0090800000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................ATGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2418.0080000003000000100000000000100000000001000000000000000000000010000000000000000010
.......................................................................................TGTTAACTGTAAGACTGTGTCTCCA.............................................................................................................................................................................................................................2518.0080000010000000000000010010000000000000002000000000000000000000000000020000000100
.......................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................................................................................................................................................................2118.0080002001000000000000000000000101100010000000000000000000000000000010000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTCCT.............................................................................................................................................................................................................................2518.0081100000000000000000000000000000000000000000000000000000000000000010002001200000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTCC.............................................................................................................................................................................................................................2517.0070100000000000000000000000000020200000001000000000000000000000000000000001000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTAT.............................................................................................................................................................................................................................2517.0070000000000000000000000010000000000000000000000000000000000000002000110000200000
droMoj3
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGC-AGCC-----------------------AAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................22172344.00723441316820481064218663213746449
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2215784.0057841821526571310
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2111394.00139412621119273837
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2111178.001178799160305510115
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................231996.0099688802724533469
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................201515.00515175143271772
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231262.00262735636461338
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................231177.0017737820374530
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................231125.0012518418383116
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................20196.009666034167
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24168.006805193806
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................22163.0063152816175
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23150.005080132513
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24143.004313160239
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................19132.00327171421
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19130.00301602372
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................25125.00251800007
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................20116.00160000160
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................21115.00151000122
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................20113.00131000111
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18112.0012600051
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................22111.0011102521
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2219.009900000
.......................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................................................................................................................................................................2217.007010060
.......................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................................................................................................................................................................2217.007000250
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2016.006100050
........................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2216.006600000
......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2315.005000050
........................................................................................GTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................2315.005500000
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................1815.005002300
.......................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................................................................................................................................................................2414.004010102
droGri2
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCC-----------------------AAGCAACAA---------------------------------AC----GAT---------------------------------------------------------GACCA--------------------CCCA---AAACGGA---------------------------------AGCCAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2221880.00376014552305
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................21289.001781708
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................21256.001123082
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................20247.00942470
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................23223.00461333
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2226.5013112
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2025.501192
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2325.001019
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2324.00844
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................2423.00606
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................2321.50303
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2021.50330
........................................................................................GTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................1921.00220
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................2321.00220
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2021.00211
.......................................................................................TGTTAACTGTAAGACTGTGTCTCC..............................................................................................................................................................................................................................2421.00202
.......................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................................................................................................................................................................2520.50110
........................................................................................GTTAACTGTAAGACTGTGTCTGC..............................................................................................................................................................................................................................2320.50110
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................2220.50110
.......................................................................................TGTTAACTGTAAGACTGTGTCTCCC.............................................................................................................................................................................................................................2520.50101
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................1820.50110
.......................................................................................TGTTAACTGTAAGACTGTGTCTACA.............................................................................................................................................................................................................................2520.50110
droAna3
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATCTCACTATCCTGCCAGC------------------------CAGCAAGCCAGCCAGCCCC---ACCAAATA---------------------------------------------ATCGCATCGAA-------------------ACCC---AACCGGATAC---------------------GAGTA----TGTGGASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................22191653.009165336182745461153491072658754
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2315606.00560610523498127123905
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2111066.00106639944190153586
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................2411060.001060712134183733
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2211012.001012129111241351
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................211956.0095634614150173372
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231596.0059610241885151272
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................201572.00572103212680351
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................231517.0051781006146392
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................201131.00131321132866
.......................................................................................TGTTAACTGTAAGACTGTGTCTTTT.............................................................................................................................................................................................................................25154.0054500251311
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................22151.005111012334
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24144.00442429126
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19139.00396203820
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................22136.0036862947
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23132.00322008418
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................23125.00251111633
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................22124.00248001213
........................................................................................GTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................23122.00221000219
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18118.00182100411
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................20114.0014101165
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................18114.0014020309
.......................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................................................................................................................................................................24112.0012010155
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................19112.0012100533
.......................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................................................................................................................................................................2119.009000036
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................2519.009017010
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2118.008250001
........................................................................................GTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................1917.007000142
.......................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................................................................................................................................................................2317.007000313
.......................................................................................TGTTAACTGTAAGACTGTGTCTTA..............................................................................................................................................................................................................................2417.007061000
.......................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................................................................................................................................................................2117.007100312
.......................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................................................................................................................................................................2416.006100005
.......................................................................................TGTTAACTGTAAGACTGTGTTCT...............................................................................................................................................................................................................................2316.006000015
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2216.006100113
.........................................................................................TTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2115.005200003
.......................................................................................TGTTAACTGTAAGACTGTTCT.................................................................................................................................................................................................................................2154.20211000218
......................................................................TGTGTATTGGAAAGCAATGTTAACT..............................................................................................................................................................................................................................................2514.004010111
.......................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................................................................................................................................................................2414.004003100
droBip1
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTACCATCCCACTATCCTGCCAGCCAGCC--------------------------------AGCCCC---ACCAAATA---------------------------------------------ATCGCATCGAA-------------------ACCC---AACCGGATAC---------------------GAGCA----TGTGGASizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACATGAAGCAAGTGGAGATTGGAGAG--------------------TGAA-A----------------AGT------------------------------GGAGAGTGGTGAGTGGAAGAGTGGC-AACCC---AACCGGATAT---------------------GGGTA----TGTGGASizeHit CountTotal NormTotal
No Reads
droFic1
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CATCAACAATGGCCCAGC----ATTAGCCAGCGAC----------------TCAACC----------------ATC-----GCATCCCATCGCATCGTATCCTATCGTATCGTAGCGAATCGAATCGAGTCGAGCAC---AACCGGATGTATA-------------------GCTA----CGTGGASizeHit CountTotal NormTotal
No Reads
droEle1
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCC-------------------CAGCAATAC--------------------------------AA---T-GTATCCAC-------ATCGA-----TTT-----GTATCGCAGCGCATCGTATCCTATAGCATCGA--------------------ACCC---AACCGGATATATG-------------------GGTA----TGTGGASizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACAC--------------------------------AA---TCGTATCCAC--------------------------------ATCGAATCGTATCCTATCGCATCGA--------------------ACCC---AACCGGATATATGGATA---TATGGAGACATGGGTG----TGTGGASizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACAG--------------------------------AA------------------------------------TCGCATCCTATCCCCAGGCCGCATATCGCATCGA--------------------ACCC---AACCGGATGTATG-------------------GGTAGGTGTGTGGASizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCT-----------------------CAGCAACAA--------------------------------A----A-GTACCAACT------------------C-----GTATC----------CTATCCTATCGCATCGA--------------------ACCC---AACCGGATGTATA-------------------AGTA----TGTGGASizeHit CountTotal NormTotal
No Reads
droEug1
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCAACAATA-------------------------------ACAAT-GTATCAACT------------------C-----GAA------ATCATCGTATCCTA-----TCGA--------------------ACCC---AAACGGATATATATATACCCTCAGTATATATAGATA----TGTGGASizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACAC--------------------------------AGCCCA-GTATCAACTATACGGATCGCTTCCCTTCGCATCGCATCGCATCGCTTTGAATCCTATCGCATCGCA-------------------GC-CAA-AACCGGATGTATAT------------------GGTA----TGTGGASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2211396801.0013968010000284117237198354961537125606112052642012970111026670016587206067783237947637745627196799122332318240951431368894814544611991781556651661000000000000000000833823665593926231261662131082233405030234144125390240923862748291492941053589155301483534114205633201151237426750013239649511845303434363604174812568206665122268672000195181101029910231296818466834156512342179108617989521278138847663551851918224730285017792710722675330625022389251123529023333757178523008778168110853037046066067381808637839911167953812122764711151883167144237822733495003371005123513529901952235976411111172844219479151911510982445095162495091516392290168001782141523105376509469551385681546312491380332439121526155419861926180661810632584154288520131737331387311432396128971073639525861440029571514126451652020521417676757462261174731333800847659455194774260902008120842122612394320741018861447369771558737961964220817756966097815556130184841613977516336498668971138861754096100771128106352211681580374871274698251066195913870228973531814026
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................23132602.003260200000010000000100100792110570000000038159744184584924654929903938218000000000000000000000002210190001011000204403001080101010313004113450180161593113313150000312000011930320729514112184240719429106608133000000002002529016201828221055151002013084111063211732051146211000008835500300091676732181846174543774432108200059035000109033547712454123747315915720515458484516820656356932834972530516314212572976427211359323307332205394936221973677246531063156241101366685616651967538837719451782849726223160527338410583027566225161391030
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................21126690.00266900000400001000010302020442130434102128271201690149617822347771210720373414419005110000000000000000028421827110002120037043601000076011432001000133190779170117051520473010359164116000014000020385986172527194437173449831852201341332375243317013418104822032292271854721873271541602293735424640015025304821920113501200025311737752592986374110160101451921331357510526210017302541122211192721794383512162091622094181335218398309223141311593976131510156387519918722406994093775310461459621511544721593431001172457125125625135323153648810183466911515856339917141252619917817610316912747889282080
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................23124983.002498300000000000000100400611530423000000001223101511218451413162314454073101401500000000000000000000022550100000100010010000005000100010100001220090212815122944226000003000042766244222730494732674151722901000106700851050633056727651913184120202201682326421000014345340000125270000001924129377346181219111886421884170028594323002328053173416076261272593087195141933383098712393521458212415441843232278935211517961197448342984017223506525895696822950773771582073872123292689023430247338613423132071811239954118341736120215162163141422823411320115515724061969510
.......................................................................................TGTTAACTGTAAGACTGTGTCTATC.............................................................................................................................................................................................................................25121859.00218590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140107849000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................22121698.00216980000200000001000002045136009000000001815161820125401161513122476722017010000000000000000000003040223261020163101701455001019011540321200102814080894201442218000004000012416334236250867589233570762911283118856482046666052223237137046148304265014912101137900016114581101040950000002520225586253030511830328335818513925941655364001060223012132491438311146814235246514312227913947696181262161245281149924915422541634105526314319317312620523775495145504469303895841161746714323366309820718526558255391122213259851385135330265692001692922823240
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................21119448.0019448000000000000001000201503021504613188290120911611249115461041015131042600000000000000000000026352531202001310001100120100003816466432100104136632360433417121061513012800000300001123920111426222816222572831022169028192219454472029664763391520781465221001115292320310783002061807170514000000176192731414916291960104583021706044210043172565427518183126102611319613752153111558424363114658925333262212389912683897658674691728976361441402221692229093105741072776291102402871238811929161294993711192432982201091703981911323142989749876811899101569170145961345
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................23115148.001514800003200000000000040100100201699980123547204332510591025420410010000000000000000002815710011000301105111111251141017811001111459331170281879211015100000010000411414071113189141371033650211004001562240151004911761121169026420212101703596000306101819018118150000001115314235131052340921025139116200230001521027113712997012364012031518275135222910111221337265752314417125342412414017643972766885174591412331224911336264215647174258463173236102830334939537758212917192526498223401074911480123511774459927
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................20110714.001071400001000000000500000021905141923286880522912211217523422310340100660000000000000000008101211000000000000005110000110000000000000109122457056139709740156742000000000047171855645816811184105007761107614506347252010233852885308848030720901253012700412326020002400420013191010171038101569913639221222800005304704760201634228425353912546810185925146931894105715131118147891731373281344564521058331148163020291363113814143156667383719113715388931811020986034394759521542914660
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................2414350.0043500000000000000000000011100000000000034166311612516341442200000000000000000000000000000000010000000000100000000000000000301000011100001000000000029885756172376010402111700000000000002501000300160300002039231215000502150000029670000000002120524891628000001002101000104404100106100000010100000143654874069068198602000231271262621064449363117707110011229333010221011002038921861455004010
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................2213137.00313700001200301110000030010010150000000011412083004005972101000000000000000000000363440000200300800200000010100100000100001330301121201011770000010000110201553387163759010001200210292702203112902402103520060043414590006051000000161700000010044281610256311711447007211300220481101333151100116022114101113111054178281663519420148060227685911224141418123349263823713171112255860742181101232627215272012288018050
.......................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................................................................................................................................................................2412123.00212300000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000010000000000001000010000000000000300000000000000000000000000000000000000000001327766000000000100100101000000000000000000010001000000011000000001100000000000000000000000100210005110
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................2511910.001910000000000000000000000100000000000002110100124105004130200000000000000000000000000101800200000000000000000000000000000000000000000000000000000444292871503911803010000000000000000000000000010000001721720000180000010790000000001021641291735727000000000100000001000000000000000000000000392754017857351714010003110132000421127245201010078513700000000000100718115000000
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2011234.00123400000000000000000000000000110000000001000010000020200000000000000000000000000012000000010001000000001100100000000000010000000102100000000000100002011000000000020380134712018010844981104004900600000000004000000000000010101015161410558100110001000020001200711103200130100300111157451832011352602736294770562630010232371131111014116637229142336741181837140
.......................................................................................TGTTAACTGTAAGACTGTGTCATC..............................................................................................................................................................................................................................2411220.0012200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863357000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................2211075.00107500000000010000000110000100100000000000000000000021201000000000000000000000000000000000004001000000000300000000000000410301018051320000000000000000110000000000000010101226012022160718501062000102011100000005000000000000000001120001200810000000000160210360600011911100000100101224332424282549414213946124301432602534829000100021112002001726311212120
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................2411031.00103100001000000000000000000200100000000000110020102000211000000000000000000000001000000000000001000000000000000000000000000200120003000000000002220113012000000000000000004020032000308200010030410001050000001000000014003011101100110012000010122440314221503418911204602141612101711211207029015191216130120235264227404247129544471140125534813912141027491060
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................231897.008970000100000000000010000110010000000000000022001007120000011100000000000000000010120001000003000011000010001000001000228050148010900000000000041021411040111102000000000710060044190705000000150000000100000000010000001003411951595272000381800330210021041201410306410100011111021024309286464123540220231931101355151181214142710272101031443433120545655320115390
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................181841.0084100000000000000010000010000079119112026000000000000000000000000000000000000000000201010000000000000000000030000500000000061000000013851100000000000000001000000000000000000024011372120197011340000060000000000003000000000001000000002200000010000000001000001000000000000010011111010204061101100025570000000000101010000010100000000500001101010
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................191762.0076200000000000000000000000000133182333500000000000000100000000100000000000000000413000000000000000000000000000000000000020000000002422001000000002100001102004110200100100217058404923446310501011010010000000022012000000000001204144444144104393610000011000001101010400201300042421103011000403050015141728101000110011006014001010010011013020001031230
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................231613.00613000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000004101021302110000000000002371002130200000000000000440200130109010000000913000000000000000100000000003021010000300000300000040000180100100800000000403010121621101213110000494430612033015345172882201112010200300103109132040019110
.......................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................................................................................................................................................................231552.0055200000100000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857211013000020000000030000000000000000000000027030000108000001500000000000002154932200002000000000000000000000000000000020000084510731052103701120521424120131218141612000772528000202400002411721603000
.......................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................................................................................................................................................................241544.0054400000000000000000000000000000000000000100000000010001000000000000000000000000000000000000001000000000002000000000000000000000000000000000002400000011000300000000006002010000000102000000010210002020000000000000000003022112210200012541430000000000012010000010000000000110000605017230100021641010053244102001022100000000201400012000000
......................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................211505.00505000000000000001000000000000000000011000000200000000000000000000000000000000010010000000000000000000000000000000000000100050701012000000000000000000011010000000000300118011021040100140000104000100000000000000000000010011002022110000000001000200001800000002000000001000011171027031200221142445217501160160670119600002020010416933132214020
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................221483.0048300000000000000000000000200100000000000000100001000100000000000000000000000000241000000000000000000000000000000000000310010231911000000000000000000000020100000000000000960300321402150000107101000000200000001000000210212100122022440050000100030001210200000110000100016010105040120406401272425342120310601802811317912320011302035723424101040
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................191300.00300000000000000000000000000000000000000100000000010010000000000000000000000000011200000100000010000000000000000000100004000001101009600000000000000002100100000000020001557160300117122020000601021000000000000000000000000100100101100001000000001001000001001200010010000020001000721011208101058913311041111154020312141020002123420110201020
.......................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................................................................................................................................................................241299.00299000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001100000000000000000000000000000000002000000000000000000100000000000000000010000101010000016898000000000000100000000000000000000000040100010000001021000102022000100011000000000000100000000010
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................201279.002790000000000000000000010000120010300000110000000000011000001100000000000000000111000000000000010000000000030000000000001000001319022100000000000000000010100200000002000003301001411030100001030001000001000000000000002020011020121101521000000010213000110003001000210002220110609270023102121330001011020520300921357141324300512410710030
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................181261.00261000000000000000000000000011000000000000000000000000000000000000000000000000032300000000000000000000000000000000000001000000001001000000000010100111000000000000200001321008002101905010000511311000000000000000000000000010020110100100000000000000000000000000000000010202000031426040501601231041428210101012112080010101002010022211000000010
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................221241.002410000000000000000000000000000000000000000000000000000000000000000000000000000102010000000000000100000000000000000000000000001000000000000000001000000112002000000000005303000123010500000000100000001000000000000001003021000100000000320000002020020113002136001201000111013417040425201053340000101401111142041112421510100410010329330
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................211238.002380000000000000000000000000010000000000000000000001001000000000000000000000000002100000000000000000000000000000000000000000110010000000000000111000000300030000100052000100002000011300000040100000000000000000000007021000301220030002000000000112000000000002000011000101105285263821310001011050010001426230002528130022302001100000210210
.......................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................231178.001780000000000000000000000000000000000000201010000000000100000000000000000000000010000000000000000000000000000000000000000000000010000000010000050001030200000000000000000000000001000300000001304000000000000030000000000000112002200000000001000000001000000000000000000100003262213290900000101210000312410010001111000000000002001412000000
........................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................221166.001660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001112002120000000000000001000001010200000000001000000000000000000000000000000000000000730010000000000002000000000000000000007264170707101002000000000010160001101114020200700000502301001130
.......................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................................................................................................................................................................231155.0015500000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000110300001100000000000000010000000000000000000100010000000000001000000000000001101001100011000000001000100120000000000100402000016120131501011411050010043341112023121200001001011243122108010
droSim2
--------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACAC--------------------------------AGCCCA-GTATCAACTATACGGATCGCTTCCCTTCGCATCGCATCGCATCGCTTTGAATCCTATCGCATCGCA-------------------GC-CAAAAACCGGATGTATAT------------------GGTA----TGTGGASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................221710080.007100805108171993030119347233455586479462154417150111212761868855114
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................22169628.0069628637871912329018001798614412083333000
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................21121010.00210109156361398231917540623307180215177792480000
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................22112616.001261610906665103510022112100000
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2318424.0084242944357370026421986186012162394352000
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2014602.0046024126802831800353710102001000
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2313656.00365629571222532001011115629101500000
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2111965.00196553875803310032933614210315810106
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................2411930.001930205800440302713406341550000
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................2011792.00179233190512747840226823525209000
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2311632.0016325315514210044127811480722105000
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................2511012.00101200090018713543023213231000
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................201554.00554503143700000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................221488.0048883611500504614212614212000
......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................231383.0038335452400000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTCG..............................................................................................................................................................................................................................241371.0037100002035100000000000
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................191336.0033629031410033886000000
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................181288.0028823165000658126000000
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................191286.00286303014128423225126012000
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................181282.0028281840917202042000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................231133.001332816309222518200100000
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................201123.001231150700000010000000
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................211107.001078311810011101000000
.........................................................................................TTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................20193.0093854400000000000000
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................22192.00926204013108121000000
.......................................................................................TGTTAACTGTAAGACT......................................................................................................................................................................................................................................16191.009100000011851849000000
......................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................23172.0072593900001000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................................................................................................................................................................23156.00560222008319172100000
.......................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................23155.00550000003229191100000
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................20154.005413201021311372000000
.......................................................................................TGTTAACTGTAAGACTGTGG..................................................................................................................................................................................................................................20153.0053493100000000000000
.........................................................................................TTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................19148.0048382100041020000000
............................................................................................ACTGTAAGACTGTGTCT................................................................................................................................................................................................................................17145.00450000003123027000000
.......................................................................................TGTTAACTGTAAGACTGTGC..................................................................................................................................................................................................................................20140.0040362200000000000000
..........................................................................................TAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................19139.0039380100000000000000
...........................................................................................AACTGTAAGACTGTGTCC................................................................................................................................................................................................................................18134.0034292200000001000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23126.002650010042851000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24124.0024530100122100000000
.......................................................................................TGTTAACTGTAAGACTGTCG..................................................................................................................................................................................................................................20123.0023182300000000000000
......................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................21121.002160200025240000000
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................22120.0020510100010111000000
.......................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................................................................................................................................................................22119.0019162000000001000000
.......................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................................................................................................................................................................21119.0019100000051111000000
........................................................................................GTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................21118.0018121500000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCAAA..............................................................................................................................................................................................................................24116.001600000041920000000
.......................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................................................................................................................................................................23116.001638000021200000000
.......................................................................................TGTTAACTGTAAGACTGTGTGG................................................................................................................................................................................................................................22115.0015130200000000000000
.......................................................................................TGTTAACTGTAAGACTGG....................................................................................................................................................................................................................................18115.0015132000000000000000
.......................................................................................TGTTAACTGTAAGACTGC....................................................................................................................................................................................................................................18114.0014140000000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................................................................................................................................................................24114.001410100011370000000
.............................................................................................CTGTAAGACTGTGTCT................................................................................................................................................................................................................................16113.001300000017212000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................................................................................................................................................................24113.001350100021211000000
..............................................................................................TGTAAGACTGTGTCT................................................................................................................................................................................................................................15111.001100000000029000000
...........................................................................................AACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................19110.0010000000000010000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................................................................................................................................................................25110.001000000021610000000
.......................................................................................TGTTAACTGTAAGACTGTTCT.................................................................................................................................................................................................................................2129.501930000024621010000
.......................................................................................TGTTAACTGTAAGACTGTGTTC................................................................................................................................................................................................................................2219.00990000000000000000
.......................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................................................................................................................................................................2219.00990000000000000000
..........................................................................................TAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................1919.00970200000000000000
...............................................................................................GTAAGACTGTGTCTA...............................................................................................................................................................................................................................1538.3325000000000025000000
.......................................................................GTGTATTGGAGACCAA......................................................................................................................................................................................................................................................1618.00800000025001000000
........................................................................................GTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................1918.00800000112310000000
droSec2
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACAC--------------------------------AGCCCA-GTATCAACTATACGGATCGCTTCCCTTC-----GCATCGCATCGCTTTGAATCCTATCGCATCGCA-------------------GC-CAAAAACCGGATGTATAT------------------GGTA----TGTGGASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................221105273.001052731300212625914770499
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2111750.001750123017651293
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2111578.001578123183861186
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2311478.001478812591031035
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2311328.00132857164115992
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................2011006.0010062311726840
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231687.006872617042449
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................221412.00412678236227
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................201180.0018090131166
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................221104.001041112279
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24158.0058517333
......................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................21140.004005134
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24138.00380101117
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................23131.003176513
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................22130.003016122
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................19125.002541020
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................20124.002416422
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19123.002314216
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18116.00163247
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................22114.001440010
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................21112.00128400
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................2318.0082105
........................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2218.0084112
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2217.0072104
........................................................................................GTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................2117.0077000
.......................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................................................................................................................................................................2316.0061311
.......................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................................................................................................................................................................2116.0061005
.......................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................................................................................................................................................................2416.0060105
........................................................................................GTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................1915.0053101
.........................................................................................TTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................1915.0053002
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................1815.0051004
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................2514.0040031
.......................................................................................TGTTAACTGTAAGACTGTC...................................................................................................................................................................................................................................1914.0040013
.......................................................................................TGTTAACTGTAAGACTGTGTCTCA..............................................................................................................................................................................................................................2413.0030012
.......................................................................................TGTTAACTGTAAGACTGTGTTCT...............................................................................................................................................................................................................................2323.0064002
.......................................................................................TGTTAACTGTAAGACTGTGA..................................................................................................................................................................................................................................2013.0030003
......................................................................................ATGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................2312.0020002
.......................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................................................................................................................................................................2412.0020200
......................................................................................ATGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2412.0020110
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................2012.0021001
.......................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................2312.0020101
droYak3
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACAC-------------------CAGCCACATCAGCCACATCG------GCCA-CAAAC----CAGCTCA-GTATCGCAA----------------CTT-----GGATCGCAACGCATTGAATGCTATCGCAACGCA-------------------GC-CAAAAACCGGATGTGTAT------------------GGTATGTGTATGGASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................221181089.001810891010937958317571600942421832739802160
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................22124376.00243761442028985751535160000
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2312821.00282120763918515113323700000
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2112746.0027461554446254110328800100
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................2212439.002439239127514920000
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2111160.0011602057794891261460000
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2011011.0010119393814224120000
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................231793.00793186573736932761080000
......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................231362.0036229606600000000
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................201287.002872831264162270000
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231252.0025277245243259310000
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................231158.00158355699132430000
.........................................................................................TTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................201144.001441400400000000
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................221111.00111222326172750000
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19180.008057101000210000
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................22153.0053411202610000
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................20152.00523401800000000
......................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................23149.0049470200000000
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18145.0045352204200000
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................21137.00372331100000000
.........................................................................................TTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................20130.0030300000000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24125.002512223870000
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24121.002102292420000
........................................................................................GTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................22121.0021112610100000
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23118.001813006800000
......................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................21116.0016000041020000
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................22116.001636021130000
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................19112.001221001800000
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................18111.001160003200000
.......................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................................................................................................................................................................24110.001050102200000
.......................................................................................TGTTAACTGTAAGACTGTGG..................................................................................................................................................................................................................................2018.00880000000000
droEre2
--------------------------------------------------CATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCC-----------------------CAGCCACACCAGCCACACCA------GCCA-CA--G----CAGCCCA-GTATCAACA----------------CTC-----GGATCGCAACGCAGTGAATCCTATCGCTTCGCA-------------------GCCA---AACCGGATGTGTGC------------------GGTA----TGTGGASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................221129674.001296741494422121480627458970859970
........................................................................................GTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2112451.002451150076592246460
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2312271.00227147171252128417770
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................2111814.00181489582131814312930
.......................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................2311169.00116983379141108800
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................201940.00940110773567930
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................221824.0082463552254541260
.......................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................231504.005046112810613430
.........................................................................................TTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................201230.0023098110211090
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................221135.0013530112127640
.......................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................23190.0090961703550
...........................................................................................AACTGTAAGACTGTGTCT................................................................................................................................................................................................................................18166.006640330560
......................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................21153.0053101113370
..........................................................................................TAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................19151.0051151012320
......................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................22151.005101807350
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................................................................................................................................................................24143.0043302011270
.......................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................................................................................................................................................................23142.004210401360
.......................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................................................................................................................................................................24128.0028110043100
.......................................................................................TGTTAACTGTAAGACTGTG...................................................................................................................................................................................................................................19127.002721300210
........................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................................................................................................................................................................22123.002380211110
......................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................23123.002303000200
.......................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................22120.002030520100
........................................................................................GTTAACTGTAAGACTGTGTC.................................................................................................................................................................................................................................20120.002010110170
.......................................................................................TGTTAACTGTAAGACTGTTCT.................................................................................................................................................................................................................................21213.502730001230
........................................................................................GTTAACTGTAAGACTGTGTCTC...............................................................................................................................................................................................................................22111.00114010240
.......................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................................................................................................................................................................21111.001100100100
......................................................................................ATGTTAACTGTAAGACTGTGTCA................................................................................................................................................................................................................................23111.001100000110
........................................................................................GTTAACTGTAAGACTGTGTCC................................................................................................................................................................................................................................2119.0094400100
......................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................2319.0090000090
.......................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................2518.0087000010
.......................................................................................TGTTAACTGTAAGACTGT....................................................................................................................................................................................................................................1818.0082010050
.......................................................................................TGTTAACTGTAAGACTGTGCT.................................................................................................................................................................................................................................2117.0071000060
........................................................................................GTTAACTGTAAGACTGTGT..................................................................................................................................................................................................................................1917.0073000220
........................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................................................................................................................................................................2216.0062000040
.....................................................................................AATGTTAACTGTAAGACTGTGTCT................................................................................................................................................................................................................................2416.0061020210
.......................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................................................................................................................................................................2416.0060000150
.......................................................................................TGTTAACTGTAAGACTGTGTTCT...............................................................................................................................................................................................................................2315.0050000230
........................................................................................GTTAACTGTAAGACTGTGTCG................................................................................................................................................................................................................................2115.0055000000
........................................................................................GTTAACTGTAAGACTGTGTCTAAA.............................................................................................................................................................................................................................2414.0044000000
.......................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................................................................................................................................................................2414.0040000130
.......................................................................................TGTTAACTGTAAGACTGTCC..................................................................................................................................................................................................................................2014.0040300010
.......................................................................................TGTTAACTGTAAGACTGTC...................................................................................................................................................................................................................................1913.0030010020
.......................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................................................................................................................................................................2313.0033000000
.........................................................................................TTAACTGTAAGACTGTGTCTCT..............................................................................................................................................................................................................................2213.0030000120

Generated: 10/20/2015 at 10:13 PM