ID:

dps_1320

 Coordinate:

3:19343297-19343431 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.0

Flybase annnotation

CDS [Dpse\GA10733-cds]; exon [dpse_GLEANR_16447:3]; exon [dpse_GLEANR_16447:2]; CDS [Dpse\GA10733-cds]; intron [Dpse\GA10733-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------##################################################
TGAAGGAGTACCAACAGCGCAACAACAACCATGCCGGAGGAGATGAGCAGGTGCAAACGGGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAGCGAGGTGAATGTGAATGAAAATGGGGGAGGAGGTTCCAGCAGTCTGCATGTCCGGCAGCAGTCGGAGGAGGCTGTTTCCCTGGCAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTAC
************************************************************************....(((..((((((((.((....((((.((....)).))))))..)))).))))..)))...**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 V112
male body		 SRR902011
testis
 GSM343916
embryo
 SRR902012
CNS imaginal disc
...................................GGAGGAGATGAGCAGGTGC..................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0
........................................................................CCACCGTCAGCATCGCCAGCAACTT.......................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
.....GAGTACCAACAGCGCAACAAC................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................TCCGACAGCGAGGTGAATGTGAATGAAA.................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0
..................GCAACAACAACCATGCCGGAGGA.................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
............................................................................................AACTTGTCCGAGCGTTCCGAC.......................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.........................................................................CACCGTCAGCATCGCCAGCA.............................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................CGAGCGTTCCGACAGCGAGGT.................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................GAAAATAGGGGAGGAGGT...................................................................................... 18 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................TGAATAAAAATGGGTAAGGAGGT...................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0
.....................................AGGAGATGAGCAGGTGCAAA.................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0
.....................ACAACAACCATGCCGGAGG................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
................GCGCAACAACAACCATGCCGGAGG................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................CGACAGCGAGGTGAATGTGAATG....................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................GCAGCAGTCGGAGGAGGC................................................ 18 0 1 1.00 1 0 1 0 0 0 0
................GCGCAACAACAACCATGCCGGAGGA.................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................GAGCGTTCCGACAGCGAGGTG................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................AGCAGTCTGCATGTCCGGC................................................................ 19 0 1 1.00 1 0 0 0 1 0 0
.........................................................................CACCGTCAGCATCGCCAGC............................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.......................................GAGAGGAGCAGGTGCATACG................................................................................................................................................................................ 20 2 2 0.50 1 1 0 0 0 0 0
.............................................................................................................GGACAGCGAGGGGAAGGTGAA......................................................................................................... 21 3 16 0.06 1 0 0 0 0 1 0
.....................................................................................................................................AAACGGGTGAGGAAGTTCC................................................................................... 19 3 18 0.06 1 1 0 0 0 0 0
..................................................................................................................................TGGAAATGGGGAAGGAGG....................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................TAACAATGGGGGAGGACGT...................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CAACACCGCGGTGAATGTG........................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

ACTTCCTCATGGTTGTCGCGTTGTTGTTGGTACGGCCTCCTCTACTCGTCCACGTTTGCCCGTGGGTGAGGAGGTGGCAGTCGTAGCGGTCGTTGAACAGGCTCGCAAGGCTGTCGCTCCACTTACACTTACTTTTACCCCCTCCTCCAAGGTCGTCAGACGTACAGGCCGTCGTCAGCCTCCTCCGACAAAGGGACCGTCGGAACGGGTGGGGGTGCCGTCGACGCGAGAAATG
****************************************************************************************************....(((..((((((((.((....((((.((....)).))))))..)))).))))..)))...************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902012
CNS imaginal disc
.....................................................................................................CTCACAAGTGTGTCGCTCC................................................................................................................... 19 3 14 1.07 15 15 0
..........................................................................................................................................................................................................GAACGGGTGGTGGTGCGGTCG............ 21 2 2 0.50 1 1 0
..........................................................................................................................................................................................................GAACGGGTGGTGGTGCGGTC............. 20 2 2 0.50 1 1 0
................................CGACCTCCTCTACACGTCCA....................................................................................................................................................................................... 20 2 4 0.25 1 1 0
..........................................................................................................................................................................................................GAACGGGTGGTGGTGCGGT.............. 19 2 5 0.20 1 1 0
............................................................................................................................................................................................................ACGGGTGGTGGTGCGGTCG............ 19 2 6 0.17 1 1 0
................................................................GGTGAAGAGCTGGCAGT.......................................................................................................................................................... 17 2 8 0.13 1 0 1
...........................................................................GGCAGTCATCGCGGTCGT.............................................................................................................................................. 18 2 9 0.11 1 1 0
.........................................................................................................................................................................CGTCTTCAGCCTCGTCCGAGA............................................. 21 3 13 0.08 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:19343247-19343481 + dps_1320 TGAAGGAGTACCAACAGCGCA---ACAACAACCATG------CCGGA------GGA---GATGAGCAGGTGCA------------AACGGGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAG------CGAGGTGAATGTGAATGAAAATGGGGGAGG--AGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGGAGGCTGTTTCCCTG---G------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTAC---------------------
droPer2 scaffold_37:343361-343595 + TGAAGGAGTACCAACAGCGCA---ACAACAACCATG------CCGGA------GGA---GATGAGCAGGCG------------CAAACGGGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAG------CGAGGTGAATGTGAATGAAAATGGGGGAGG--AGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGGAGGCTGTTTCCCTG---G------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTAC---------------------
droWil2 scf2_1100000004513:4885331-4885502 + TGAAGGAGTACCAACAGCGAAATAATAACAATAGCAACACATCCCAT------ACG---GAGG---------------------------------------------CGGCTTCAGCTGGCAACTTGTTGGAGCATCCGACCCACCCACCAGAGACGAATGTAAATGGATCACCCGGAGAGGAAGGGCA------GGCA-----------------------------------------------CCGATA------------------------------GCC---------ACCACTACTGCGGTAGGCTTGAC---------------------
droVir3 scaffold_12875:11665599-11665818 - TGAAAGAGTATCAGCAGCGTAACAACAACAACAATGAT------------------------GAAAACGTCGGTACTAAC------------ACCCATTCGTCGACAGTGAGCATAGCCAGCAATTTGTCGGAACGTTCCGACTG------TGATTTAAGCTCAAGCAATGGCGGCGGA-----------------------CC---------GCAG---------CACACGCTGGAGCAGCACACAACGCCA------------------------------GCCCCA------ACCGGAGTGGCTGCATATTTTTCACAACAGACAGTACCGCTCAT
droMoj3 scaffold_6496:15202932-15203169 + TGAAAGAGTACCAGCAACGCAACAACAACAACATTGA------------------------GGAGAACATTGGCACTAAC------------ACCAATTCGTCAACAGTAAGCATTGCCAGCAATTTATCCGAACGCTCCGATTG------CGAATTAAGCTCGAGCAATGGCGTCGGC--------AGC------GGCAGCGG-----AGC-GGCGCAGTCGCAGCAAACAGTGGAGCAG---ACAATGCCA------------------------------GCAATG------CCCTCGGCAGCTGCGTATTTTTCCGAGAAGCCGATGCCGACAAT
droGri2 scaffold_15245:6562001-6562229 + TAAAAGAGTATCAGCAGCGCACCAACAACAACAATA---------------------------------------------TGGAT------GAACACTCATCAACGGTGAGCATCGCCAGCAATTTATCAGAGCGTTCCGACTG------TGAGTTAAGCCTGAGCAACGGCGCCGGA--------ATC------GGAATCCA---------GGCACAACAG---CAGATGCCGGAGCAACAAATCGTGACAGCAACTGCAGCTGCAGCACCGCTCGAACCAAATCCA------ACTGGAATCGCTGCTTATTTTGC---------------------
droAna3 scaffold_13266:11377671-11377880 - TGAAGGAGTACCAGCTGCGC---AACAACAACAACAGTCACCCGGCG------TCT---GAGGAGCCGCTGCCC------------------TCGTACTCGTCCACTGTCAGCATAGCTAGCAACTTGTCGGAACGGTCCGACTG------TGAGACGAGTCTCAATGGCGCTGCTGGAGC--CGGAACC------GGCAGTTT---------GCCGGCACAGGAGCAGAC---------------------A------------------------------GCTGTG------CCCACAGCCGCTTCCTTTTTCCC-------------------AC
droBip1 scf7180000396547:1087269-1087476 + TGAAGGAGTACCAGCTGCGC---AACAACAACAACAGCCATCCGGCG------TCC---GAGGAGCCCCTGCCC------------------TCGCACTCGTCCACGGTCAGCATAGCCAGCAACTTGTCGGAACGCTCCGACTG------TGAGACTAGTACCAATGGAGCTGCTGGAGC--CGGAGCC------GGCAATTT---------GCCACCACAGGAGCAAAC---------------------A------------------------------GCTGTG------CCCACAGCCGCCTCGTTTTTCAC---------------------
droKik1 scf7180000302232:68490-68721 + TGAAGGAATACCAGCAGCGCAACAACAACAATAATGGACAGTCGGGAGCCGCAGCAGCCGAGGAGGCGGTGTC---------GCAATCGCACTCGCACTCCTCCACCGTCAGCATAGCCAGCAACTTGTCCGAGCGCTCCGACAG------CGAGCCAAATGTGAATGGCAGCGGTGGA--------TCCGGTATTGTTGGCTT---------TCAGCAGCCGGATCCACC---------------------C------------G---------------CAGTCCTG------CCCACAGCGGCATCTTTTTTCAC---------------------
droFic1 scf7180000453858:452327-452540 - TGAAGGAGTACCAGCAGCGGGCCAGCAACAACAATGGGCAGCCGGGA------ACG---GAGGAACCGGTGGCCCCCACCACGCAA------TCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCCGAGCGCTCTGACAG------CGAGTTGAACGTGAACGGC-----------GGAGGAACG------GGAGTCCA---------TCAGCAGCAGGAACAGTT---------------------C------------------------------GTCCTG------CCCACAGCCGCTTCATATTTCAC---------------------
droEle1 scf7180000491211:439809-440022 - TGAAGGAGTACCAGCAGCGGGCCAGCAACAACAATAGCCAGCAGGGA------GCG---GAGGAGCCGGTGGCCTCCACCACGCAA------TCGCCCTCGTCCACAGTTAGCATAGCCAGCAACCTGTCCGAGCGCTCCGACAG------CGAGCTAAATGTAAACGGA-----------GGGGGAGCC------GTTGCTCC---------TTTGCAGCAGGAACAGTT---------------------C------------------------------GTCCTG------CCCACAGCCGCCTCCTATTTCAC---------------------
droRho1 scf7180000758468:7934-8147 + TGAAGGAGTACCAGGAGCGGGCCAGCAACAACAACGGCCAGCCGGGG------GCG---GAGGAGCTGGTGGCCACCACCACGCAA------TCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCGGAGCGCTCCGACAG------CGAGCTAAATGTGAATGGA-----------GTTGGAGCC------GGTGGTTC---------ACAACAGCAGGAACCTTC---------------------C------------------------------GTCTTG------CCCACAGCCGCTTCCTATTTTAC---------------------
droBia1 scf7180000301754:5154572-5154785 - TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGCCCCGCGGGG------ACG---GAGGAGCCGGTGGCCCCCGCCACGCAG------TCGCACTCGTCCACGGTCAGCATTGCCAGCAATCTTTCCGAGCGCTCCGACAG------CGAGATAAACGTGAACGGC-----------GGAGGAGCC------GGTGGCCT---------CCAGCAGCAGGAGCAGCC---------------------G------------------------------GTCCAG------CCCACTGTGGCCTCCTACTTCGC---------------------
droTak1 scf7180000415243:176872-177079 - TGAAGGAGTACCAGCAGCGCGCGAGCAACAACAATGGCCACCCGGGA------GTG---GAGGAGCCGCTGGCCACCGCCACGCAG------TCGCACTCGTCTACTGTAAGCATTGCGAGCAATCTTTCCGAGCGTTCCGACAG------CGAGGTGAATGTAAATGGA-----------GGAGGAACT------GGTGGTC---------------AGCAGGAGCAGTT---------------------T------------------------------GCCCAT------CCCACAGCTGCTTCCTACTTTGC---------------------
droEug1 scf7180000409663:13831-14044 - TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGCCACCCGGGA------GCG---GAGGAGCATGTGGCACCCACCCCACAA------TCGCACTCGTCCGCTGTCAGCATAGCTAGTAATCTTTCCGAGCGCTCAGACAG------CGAGATAAATGTGAACGGA-----------GCAGGAGCC------GGCGGTCT---------TCAGCAACTGGAGTCTTC---------------------C------------------------------GTCCCC------CTCACGGCTGCTTCCTACTTTTC---------------------
dm3 chr2R:18014500-18014708 - TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCGGGA------GCA---GAGGAGCCGGTGGCTGCCACCACGCAA------TCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGGTCAGACAG------CGAGATAAATGTGAACGGT-----------GGAGGAGCA------GGTGGGAC---------GCAGCCGCCGGAGCAGTC---------------------T------------------------------GCCCTG------CCCACAGCCGCTTCTTAT--------------------------
droSim2 2r:18552039-18552247 - dsi_21971 TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GCT---GAGGAGCCGGTGGCCGCCACCACGCAA------TCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGCTCAGACAG------CGAGATAAATGTGAACGTA-----------GGAGGAGCA------GGTGGGAC---------TCAGCCGCCGGAGCAGTC---------------------T------------------------------GTCCTG------CCCACACCCGCTTCTTAT--------------------------
droSec2 scaffold_9:1324950-1325097 - TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GCT---GAGGAGGCGGTGGCCGCCACCACGCAA------TCGCACTCGTC-ACTGTGAGCATATCCAGCAATCTGTCGGAACGGTAAGACAG------CGAGATAAATGTGAACGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:11163682-11163895 + dya_539 TGAAGGAGTACCAGCAACGCGCCAGCAACAACAATGGTCAGCCGGGA------GCG---GAGGAGCCGGTGGCTGCCACCACGCAA------TCGCACTCGTCCACGGTGAGCATAGCCAGCAATCTATCGGAGCGCTCAGACAG------CGAAATAAATGTGAACGGT-----------GGAGGCGCA------GGCGGTAC---------TCCGCAGCCCGAGCAGTC---------------------T------------------------------GTCCTG------CCCACAGCCGCTTCTTATTTTGC---------------------
droEre2 scaffold_4845:12153328-12153541 - TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGTCAGCCGGGA------GCG---GAGGAGTCGGTGGCTGCCACCACACAA------TCGCCCTCGTCCACGGTGAGCATAGCCAGCAATCTGTCGGAGCGCTCAGATAG------CGAGATAAATGTGAACGGG-----------GGAGGAGCA------GGCGGTAC---------TCCGCAGACCGAGCAGTC---------------------T------------------------------GTCTTG------CCCACAGCCGCTTCTTATTTTGC---------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGAAGGAGTACCAACAGCGCA---ACAACAACCATG------CCGGA------GGA---GATGAGCAGGTGCA------------AACGGGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAG------CGAGGTGAATGTGAATGAAAATGGGGGAGG--AGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGGAGGCTGTTTCCCTG---G------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTAC---------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................GGA------GGA---GATGAGCAGGTGC...........................................................................................................................................................................................................................................................................1912.0020200000000
......................................................................................................CCACCGTCAGCATCGCCAGCAACTT....................................................................................................................................................................................................................2512.0020200000000
.....GAGTACCAACAGCGCA---ACAAC......................................................................................................................................................................................................................................................................................................................2111.0010010000000
.........................................................................................................................................TCCGACAG------CGAGGTGAATGTGAATGAAA........................................................................................................................................................................2811.0010000001000
..................GCA---ACAACAACCATG------CCGGA------GGA---........................................................................................................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................AACTTGTCCGAGCGTTCCGAC....................................................................................................................................................................................................2111.0010010000000
.......................................................................................................CACCGTCAGCATCGCCAGCA........................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................CGAGCGTTCCGACAG------CGAGGT......................................................................................................................................................................................2111.0010100000000
..............................................A------GGA---GATGAGCAGGTGCA------------AA............................................................................................................................................................................................................................................................2011.0010000000010
........................ACAACAACCATG------CCGGA------GG............................................................................................................................................................................................................................................................................................1911.0010100000000
................GCGCA---ACAACAACCATG------CCGGA------GG............................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................CGACAG------CGAGGTGAATGTGAATG...........................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................GCAGCAGTCGGAGGAGGC............................................................................................................1811.0010010000000
................GCGCA---ACAACAACCATG------CCGGA------GGA---........................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................GAGCGTTCCGACAG------CGAGGTG.....................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................AGCAGTCTGCATGTCCGGC............................................................................................................................1911.0010000000010
.......................................................................................................CACCGTCAGCATCGCCAGC.........................................................................................................................................................................................................................1911.0010100000000
droPer2
TGAAGGAGTACCAACAGCGCA---ACAACAACCATG------CCGGA------GGA---GATGAGCAGGCG------------CAAACGGGCACCCACTCCTCCACCGTCAGCATCGCCAGCAACTTGTCCGAGCGTTCCGACAG------CGAGGTGAATGTGAATGAAAATGGGGGAGG--AGGTTCC------AGCAGTCTGCATGTCCGGCAGCAGTCGGAGGAGGCTGTTTCCCTG---G------------------------------------CAGCCTTGCCCACCCCCACGGCAGCTGCGCTCTTTAC---------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................TTCCGACAG------CGAGGTGAATGTGAA.............................................................................................................................................................................2411.001000001
....................................................................................................................................................................................G--AGGTTCC------AGCAGTCTGC.....................................................................................................................................1811.001001000
...................................................................................................................................................................GAATGAAAATGGGGGAGG--AG..........................................................................................................................................................2011.001000001
....................................................................................................CTCCACCGTCAGCATCGCCAGCAACTT....................................................................................................................................................................................................................2711.001100000
droWil2
TGAAGGAGTACCAACAGCGAAATAATAACAATAGCAACACATCCCAT------ACG---GAGG---------------------------------------------CGGCTTCAGCTGGCAACTTGTTGGAGCATCCGACCCACCCACCAGAGACGAATGTAAATGGATCACCCGGAGAGGAAGGGCA------GGCA-----------------------------------------------CCGATA------------------------------GCC---------ACCACTACTGCGGTAGGCTTGAC---------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...AGGAGTACCAACAGCGAAATA...........................................................................................................................................................................................................................................................................................................................2111.00100010
.....................................................................................................................................................................ATGGATCACCCGGAGAGGAAGG........................................................................................................................................................2211.00100010
......................................................................................................................................................................TGGATCACCCGGAGAGGAAGGGC......................................................................................................................................................2311.00100010
............................................................................................................................................................................ACCCGGAGAGGAAGGGCA------GGC............................................................................................................................................2111.00100010
TGAAGGAGTACCAACAGC.................................................................................................................................................................................................................................................................................................................................1811.00100010
.......................................................................................................................................................................GGATCACCCGGAGAGGAAGGGCA------...............................................................................................................................................2311.00100100
........................................................................................................................................................................GATCACCCGGAGAGGAAGGGC......................................................................................................................................................2111.00100100
................................................................................................................TTCAGCTGGCAACTTGTTGGAGC............................................................................................................................................................................................................2311.00100010
..............................ATAGCAACACATCCCAT------ACG---GAGG---------------------------------------------C......................................................................................................................................................................................................................................2511.00100010
.......................................................................................................................................................................GGATCACCCGGAGAGGAAGGGC......................................................................................................................................................2211.00100100
droVir3
TGAAAGAGTATCAGCAGCGTAACAACAACAACAATGAT------------------------GAAAACGTCGGTACTAAC------------ACCCATTCGTCGACAGTGAGCATAGCCAGCAATTTGTCGGAACGTTCCGACTG------TGATTTAAGCTCAAGCAATGGCGGCGGA-----------------------CC---------GCAG---------CACACGCTGGAGCAGCACACAACGCCA------------------------------GCCCCA------ACCGGAGTGGCTGCATATTTTTCACAACAGACAGTACCGCTCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................AATGAT------------------------GAAAACGTCGGTACTAA....................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000200000000000000000000000000000000
.................................................................................................................................CGGAACGTTCCGACTG------TGA.........................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
.............................................................................AAC------------ACCCATTCGTCGACAGTGA....................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................AAGCAATGGCGGCGGA-----------------------CC---------GCA...........................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........ATCAGCAGCGTAACAACAACAACA..................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AATTTGTCGGAACGTTCC.......................................................................................................................................................................................................1811.001000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CACAACAGACAGTACCGCTC..2011.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................CATTCGTCGACAGTGAGCATAGCCAG..........................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................GGA-----------------------CC---------GCAG---------CACACGCTGGAGC....................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..........TCAGCAGCGTAACAACAACAACAA.................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................GGAACGTTCCGACTG------TGATTTAAGC..................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GCTGCATATTTTTCACAACAGACAGT.........2611.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................ACTAAC------------ACCCATTCGTCGACAGT......................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................GACAGTGAGCATAGCCAGC.........................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GA-----------------------CC---------GCAG---------CACACGCTGGAGC....................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
............AGCAGCGTAACAACAACAACA..................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...........................................................................CTAAC------------ACCCATTCGTCGACAGTGA....................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GA-----------------------CC---------GCAG---------CACACGCTGGAGCA...................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TGAAAGAGTACCAGCAACGCAACAACAACAACATTGA------------------------GGAGAACATTGGCACTAAC------------ACCAATTCGTCAACAGTAAGCATTGCCAGCAATTTATCCGAACGCTCCGATTG------CGAATTAAGCTCGAGCAATGGCGTCGGC--------AGC------GGCAGCGG-----AGC-GGCGCAGTCGCAGCAAACAGTGGAGCAG---ACAATGCCA------------------------------GCAATG------CCCTCGGCAGCTGCGTATTTTTCCGAGAAGCCGATGCCGACAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................GTATTTTTCCGAGAAGCCGATGCCGA....2611.001000001
.......................................................................................................................................................................................................................................AGTGGAGCAG---ACAATGCCA------------------------------GC......................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................CCCTCGGCAGCTGCGTAT..........................1811.001000100
..........................................................................................................................................................................................................GG-----AGC-GGCGCAGTCGCAGC................................................................................................................1911.001100000
droGri2
TAAAAGAGTATCAGCAGCGCACCAACAACAACAATA---------------------------------------------TGGAT------GAACACTCATCAACGGTGAGCATCGCCAGCAATTTATCAGAGCGTTCCGACTG------TGAGTTAAGCCTGAGCAACGGCGCCGGA--------ATC------GGAATCCA---------GGCACAACAG---CAGATGCCGGAGCAACAAATCGTGACAGCAACTGCAGCTGCAGCACCGCTCGAACCAAATCCA------ACTGGAATCGCTGCTTATTTTGC---------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................G---CAGATGCCGGAGCAACA................................................................................................1811.00110
.....................................................................................................................................................................................................GAATCCA---------GGCACAACAG---CA...............................................................................................................1911.00110
....................................................................................................................................................................................................................................GATGCCGGAGCAACAAATCGTG.........................................................................................2211.00110
droAna3
TGAAGGAGTACCAGCTGCGC---AACAACAACAACAGTCACCCGGCG------TCT---GAGGAGCCGCTGCCC------------------TCGTACTCGTCCACTGTCAGCATAGCTAGCAACTTGTCGGAACGGTCCGACTG------TGAGACGAGTCTCAATGGCGCTGCTGGAGC--CGGAACC------GGCAGTTT---------GCCGGCACAGGAGCAGAC---------------------A------------------------------GCTGTG------CCCACAGCCGCTTCCTTTTTCCC-------------------ACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................CACAGCCGCTTCCTTTTTCCC-------------------..2111.001010000
.......GTACCAGCTGCGC---AACAACAACA..................................................................................................................................................................................................................................................................................................................2311.001000001
.........................................................................................................................................................................................................TTT---------GCCGGCACAGGAGCAGAC---------------------A------------------------------GCTGT...................................................2711.001001000
................................................................................................................CATAGCTAGCAACTTGTCGG...............................................................................................................................................................................................................2011.001000010
...................................................................................................................AGCTAGCAACTTGTCGGAACGGT.........................................................................................................................................................................................................2311.001000010
......................................................................................................................................................................TGGCGCTGCTGGAGC--CGGA........................................................................................................................................................1911.001100000
.......................................................................................................................AGCAACTTGTCGGAACGGTCCGACT...................................................................................................................................................................................................2511.001000100
.............................AACAACAGTCACCCGGCG------TCT---GAGGAGC.................................................................................................................................................................................................................................................................................2811.001100000
.......................................................................................................................................................................GGCGCTGCTGGAGC--CGGAACC------...............................................................................................................................................2111.001100000
....................................................................................................................................AACGGTCCGACTG------TGAGACGA....................................................................................................................................................................................2111.001100000
TGAAGGAGTACCAGCTGCGC---............................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................AGTTT---------GCCGGCACAGGAGC................................................................................................................1911.001010000
droBip1
TGAAGGAGTACCAGCTGCGC---AACAACAACAACAGCCATCCGGCG------TCC---GAGGAGCCCCTGCCC------------------TCGCACTCGTCCACGGTCAGCATAGCCAGCAACTTGTCGGAACGCTCCGACTG------TGAGACTAGTACCAATGGAGCTGCTGGAGC--CGGAGCC------GGCAATTT---------GCCACCACAGGAGCAAAC---------------------A------------------------------GCTGTG------CCCACAGCCGCCTCGTTTTTCAC---------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGAAGGAATACCAGCAGCGCAACAACAACAATAATGGACAGTCGGGAGCCGCAGCAGCCGAGGAGGCGGTGTC---------GCAATCGCACTCGCACTCCTCCACCGTCAGCATAGCCAGCAACTTGTCCGAGCGCTCCGACAG------CGAGCCAAATGTGAATGGCAGCGGTGGA--------TCCGGTATTGTTGGCTT---------TCAGCAGCCGGATCCACC---------------------C------------G---------------CAGTCCTG------CCCACAGCGGCATCTTTTTTCAC---------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGAAGGAGTACCAGCAGCGGGCCAGCAACAACAATGGGCAGCCGGGA------ACG---GAGGAACCGGTGGCCCCCACCACGCAA------TCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCCGAGCGCTCTGACAG------CGAGTTGAACGTGAACGGC-----------GGAGGAACG------GGAGTCCA---------TCAGCAGCAGGAACAGTT---------------------C------------------------------GTCCTG------CCCACAGCCGCTTCATATTTCAC---------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGAAGGAGTACCAGCAGCGGGCCAGCAACAACAATAGCCAGCAGGGA------GCG---GAGGAGCCGGTGGCCTCCACCACGCAA------TCGCCCTCGTCCACAGTTAGCATAGCCAGCAACCTGTCCGAGCGCTCCGACAG------CGAGCTAAATGTAAACGGA-----------GGGGGAGCC------GTTGCTCC---------TTTGCAGCAGGAACAGTT---------------------C------------------------------GTCCTG------CCCACAGCCGCCTCCTATTTCAC---------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGAAGGAGTACCAGGAGCGGGCCAGCAACAACAACGGCCAGCCGGGG------GCG---GAGGAGCTGGTGGCCACCACCACGCAA------TCGCACTCGTCCACAGTTAGCATAGCCAGTAATCTGTCGGAGCGCTCCGACAG------CGAGCTAAATGTGAATGGA-----------GTTGGAGCC------GGTGGTTC---------ACAACAGCAGGAACCTTC---------------------C------------------------------GTCTTG------CCCACAGCCGCTTCCTATTTTAC---------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGCCCCGCGGGG------ACG---GAGGAGCCGGTGGCCCCCGCCACGCAG------TCGCACTCGTCCACGGTCAGCATTGCCAGCAATCTTTCCGAGCGCTCCGACAG------CGAGATAAACGTGAACGGC-----------GGAGGAGCC------GGTGGCCT---------CCAGCAGCAGGAGCAGCC---------------------G------------------------------GTCCAG------CCCACTGTGGCCTCCTACTTCGC---------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGAAGGAGTACCAGCAGCGCGCGAGCAACAACAATGGCCACCCGGGA------GTG---GAGGAGCCGCTGGCCACCGCCACGCAG------TCGCACTCGTCTACTGTAAGCATTGCGAGCAATCTTTCCGAGCGTTCCGACAG------CGAGGTGAATGTAAATGGA-----------GGAGGAACT------GGTGGTC---------------AGCAGGAGCAGTT---------------------T------------------------------GCCCAT------CCCACAGCTGCTTCCTACTTTGC---------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGCCACCCGGGA------GCG---GAGGAGCATGTGGCACCCACCCCACAA------TCGCACTCGTCCGCTGTCAGCATAGCTAGTAATCTTTCCGAGCGCTCAGACAG------CGAGATAAATGTGAACGGA-----------GCAGGAGCC------GGCGGTCT---------TCAGCAACTGGAGTCTTC---------------------C------------------------------GTCCCC------CTCACGGCTGCTTCCTACTTTTC---------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCGGGA------GCA---GAGGAGCCGGTGGCTGCCACCACGCAA------TCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGGTCAGACAG------CGAGATAAATGTGAACGGT-----------GGAGGAGCA------GGTGGGAC---------GCAGCCGCCGGAGCAGTC---------------------T------------------------------GCCCTG------CCCACAGCCGCTTCTTAT--------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................AATGGGCAGCCGGGA------GCA---GAGGAGCCGGT.............................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GAGCA------GGTGGGAC---------GCAGCCGCCG....................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AGACAG------CGAGATAAATGTGAA.............................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGGGA------GCA---GAGGAGCCGGTG............................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................A------GGTGGGAC---------GCAGCCGCCGGAGC................................................................................................................2312.0020000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CGGAACGGTCAGACAG------CGAGATA.....................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CAGCCGCCGGAGCAGTC---------------------T------------------------------GCC.....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CTGTCGGAACGGTCAGACA...................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000
.......................................................A---GAGGAGCCGGTGGCTGCCACC...................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................GCCAGCAACAACAATGGGC............................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AGGAGCA------GGTGGGAC---------GCAGCCGCC.....................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GTCGGAACGGTCAGACAC------............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................GAGATAAATGTGAACGGT-----------GGAGGAGCA------G..............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AGCCGCCGGAGCAGTC---------------------T------------------------------GCCCTG------CCCAC.......................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................AAATGTGAACGGT-----------GGAGGAGC......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................AATGTGAACGGT-----------GGAGGAGCA------...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................AATCTGTCGGAACGGTCAGACAG------C...........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................CTCGTCCACTGTGAGCATATCCAGCA........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
TGAAGGAGTACCAGCAGCGCGCCAG..........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................CGGGA------GCA---GAGGAGCCGGTGGCTGC.......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................CGCACTCGTCCACTGTGAGC..................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................AATGGGCAGCCGGGA------GC............................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GAGGAGCCGGTGGCTGCCACC...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................A------TCGCACTCGTCCACTGTGAGCAT................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AGGAGCCGGTGGCTGCCACCA..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................A------GCA---GAGGAGCCGGTGGCTGCCA.....................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CACGCAA------TCGCACTCGTC............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GAGGAGCA------GGTGGGAC---------GCAGCC........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AATGGGCAGCCGGGA------GCA---GAG.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TGTGAGCATATCCAGCAAT......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................GAGGAGCA------GGTGGGAC---------GCAGC.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................TAAATGTGAACGGT-----------GGAG..........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................ACTGTGAGCATATCCAGCA........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AG------CGAGATAAATGTGAACGG..........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................GAGGAGCA------GGTGGGAC---------GCAGCCGCC.....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTACCAGCAGCGCGCCAGCA........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................A---GAGGAGCCGGTGGCTGCCAC....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TAAATGTGAACGGT-----------GGAGGAGCA------GGTG...........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................TCAGACAG------CGAGATAAATGTG...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................GTCGGAACGGTCAGACAG------CGAGAT......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GAC---------GCAGCCGCCGGAGCAGTC---------------------T------------------------------GCC.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TCAGACAG------CGAGATAAATGTGAACGG..........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AGCA------GGTGGGAC---------GCAGCCGCCGGA..................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GGAACGGTCAGACAG------CGAGAT......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................ACAG------CGAGATAAATGTGAAC............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AGCA------GGTGGGAC---------GCAGCCGCC.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGCCGGGA------GCA---GAGGAGCCGGTGGC..........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................ATATCCAGCAATCTGTCGGAACGGTCA.......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................ATATCCAGCAATCTGTCGGAACGGTC........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................C---------GCAGCCGCCGGAGCAGT.............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................A------GCA---GAGGAGCCGGTGGC..........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................GGAGCA------GGTGGGAC---------GCAGCC........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ATCTGTCGGAACGGTCAGA.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................GCAGCCGGGA------GCA---GAGGAGCC................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GCCACCACGCAA------TCGCACTCGTCC...........................................................................................................................................................................................................................................2411.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................A---GAGGAGCCGGTGGCTGCCACCA..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................GGAGCCGGTGGCTGCCACCACG................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................TCTGTCGGAACGGTCAGACAG------C...........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................CGCAA------TCGCACTCGTCCACTGTGAGC..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................GGGCAGCCGGGA------GCA---GAGGA...................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droSim2
TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GCT---GAGGAGCCGGTGGCCGCCACCACGCAA------TCGCACTCGTCCACTGTGAGCATATCCAGCAATCTGTCGGAACGCTCAGACAG------CGAGATAAATGTGAACGTA-----------GGAGGAGCA------GGTGGGAC---------TCAGCCGCCGGAGCAGTC---------------------T------------------------------GTCCTG------CCCACACCCGCTTCTTAT--------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................ATATCCAGCAATCTGTCGGAACGCT.........................................................................................................................................................................................................2514.00400400000000000000
.......................................................................................................................................................................................................................AGCCGCCGGAGCAGTC---------------------T------------------------------GT......................................................1912.00200200000000000000
....................................................................................AA------TCGCACTCGTCCACTGTG.....................................................................................................................................................................................................................................2011.00101000000000000000
.....................................................................................A------TCGCACTCGTCCACTGTGAGC..................................................................................................................................................................................................................................2211.00101000000000000000
.................................ATGGGCAGCCTGGA------GCT---GAGGAGCCGGT.............................................................................................................................................................................................................................................................................2811.00100100000000000000
..........................................................................................................................................................................................................AC---------TCAGCCGCCGGAGCAGT.............................................................................................................1911.00100000000000100000
.................................................................................................................ATATCCAGCAATCTGTCGGAAC............................................................................................................................................................................................................2211.00100100000000000000
.................................................................................................CTCGTCCACTGTGAGCATATCCAGCAAT......................................................................................................................................................................................................................2811.00100000000000001000
..................................................................................................................TATCCAGCAATCTGTCGGAACGCT.........................................................................................................................................................................................................2411.00100010000000000000
..........................................................................................................TGTGAGCATATCCAGCAATCTGTCGGAA.............................................................................................................................................................................................................2811.00100000000100000000
.........................................................................................................................................................................................................GAC---------TCAGCCGCCGGAGCAGTC---------------------T------------------------------GTCCTG------............................................2811.00110000000000000000
.....................................................................................................................CCAGCAATCTGTCGGAACGC..........................................................................................................................................................................................................2011.00101000000000000000
...............................................................................CACGCAA------TCGCACTCGTCCACTGTGAGC..................................................................................................................................................................................................................................2811.00101000000000000000
................................................................................................................CATATCCAGCAATCTGTCGGA..............................................................................................................................................................................................................2111.00100100000000000000
droSec2
TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGGCAGCCTGGA------GCT---GAGGAGGCGGTGGCCGCCACCACGCAA------TCGCACTCGTC-ACTGTGAGCATATCCAGCAATCTGTCGGAACGGTAAGACAG------CGAGATAAATGTGAACGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................ATATCCAGCAATCTGTCG................................................................................................................................................................................................................1812.0020020
...............................................................................................................................................AG------CGAGATAAATGTGAACGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.0010010
................GCGCGCCAGCAACAACAATGGG.............................................................................................................................................................................................................................................................................................................2211.0011000
..........................AACAACAATGGGCAGCCTGGA------GCT---GA......................................................................................................................................................................................................................................................................................2611.0010100
........................GCAACAACAATGGGCAGCCTGGA------GCT---GA......................................................................................................................................................................................................................................................................................2811.0010010
.................................................................................................................ATATCCAGCAATCTGTCGGAAC............................................................................................................................................................................................................2211.0011000
droYak3
TGAAGGAGTACCAGCAACGCGCCAGCAACAACAATGGTCAGCCGGGA------GCG---GAGGAGCCGGTGGCTGCCACCACGCAA------TCGCACTCGTCCACGGTGAGCATAGCCAGCAATCTATCGGAGCGCTCAGACAG------CGAAATAAATGTGAACGGT-----------GGAGGCGCA------GGCGGTAC---------TCCGCAGCCCGAGCAGTC---------------------T------------------------------GTCCTG------CCCACAGCCGCTTCTTATTTTGC---------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................GGTCAGCCGGGA------GCG---GAGGAGCCGGT.............................................................................................................................................................................................................................................................................2612.00201000010000
.......................................AGCCGGGA------GCG---GAGGAGCC................................................................................................................................................................................................................................................................................1912.00200200000000
.............................................................................................................................CTATCGGAGCGCTCAGAC....................................................................................................................................................................................................1811.00110000000000
....................................................................................AA------TCGCACTCGTCCACGGTGAGC..................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................................A------GGCGGTAC---------TCCGCAGCCCGAG.................................................................................................................2211.00100000100000
.................................................................................................................ATAGCCAGCAATCTATCGGAGCGCT.........................................................................................................................................................................................................2511.00100000010000
......................................................................GGCTGCCACCACGCAA------TC.....................................................................................................................................................................................................................................................1811.00101000000000
...........................................................................................................................................................ATAAATGTGAACGGT-----------GGAG..........................................................................................................................................................1911.00100000010000
...............................................................................CACGCAA------TCGCACTCGTCCAC.........................................................................................................................................................................................................................................2111.00100000010000
..............................................................GAGCCGGTGGCTGCCACCACGCAA------TCG....................................................................................................................................................................................................................................................2711.00100000010000
......................................................................................................................................CGCTCAGACAG------CGAAATAAATGT................................................................................................................................................................................2311.00101000000000
...................................................................................................................AGCCAGCAATCTATCGGAGCGCTC........................................................................................................................................................................................................2411.00100010000000
.................................ATGGTCAGCCGGGA------GCG---GAGGAGCCGGT.............................................................................................................................................................................................................................................................................2811.00100100000000
..........................................................................................................................AATCTATCGGAGCGCTCAGAC....................................................................................................................................................................................................2111.00101000000000
..........................AACAACAATGGTCAGCCGGGA------GCG---GA......................................................................................................................................................................................................................................................................................2611.00100000010000
...................................................................................................CGTCCACGGTGAGCATAGCCAGC.........................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................................GGAGGCGCA------GGCGGTAC---------TCCGCAGCCC....................................................................................................................2711.00101000000000
.................................ATGGTCAGCCGGGA------GCG---GAG.....................................................................................................................................................................................................................................................................................2011.00100100000000
..................................................................................GCAA------TCGCACTCGTCCACGGTGAGC..................................................................................................................................................................................................................................2511.00100000010000
...................................................................................CAA------TCGCACTCGTCCACGGTGAGC..................................................................................................................................................................................................................................2411.00100000010000
..........................................CGGGA------GCG---GAGGAGCCGGTGGCTGC.......................................................................................................................................................................................................................................................................2511.00100000010000
droEre2
TGAAGGAGTACCAGCAGCGCGCCAGCAACAACAATGGTCAGCCGGGA------GCG---GAGGAGTCGGTGGCTGCCACCACACAA------TCGCCCTCGTCCACGGTGAGCATAGCCAGCAATCTGTCGGAGCGCTCAGATAG------CGAGATAAATGTGAACGGG-----------GGAGGAGCA------GGCGGTAC---------TCCGCAGACCGAGCAGTC---------------------T------------------------------GTCTTG------CCCACAGCCGCTTCTTATTTTGC---------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................ATAGCCAGCAATCTGTCGGA..............................................................................................................................................................................................................2012.0021000100
...................................................................................................................................................................GAACGGG-----------GGAGGAGCA------GG.............................................................................................................................................1811.0010000100
...........................................................................................................................ATCTGTCGGAGCGCTCAGATAG------CGAG........................................................................................................................................................................................2611.0010000100
.................................................................................CACAA------TCGCCCTCGTCCACGGTG.....................................................................................................................................................................................................................................2311.0010000010
.................................................................................................................ATAGCCAGCAATCTGTCGGAG.............................................................................................................................................................................................................2111.0011000000
...........................................................................................................................................AGATAG------CGAGATAAATGTGAAC............................................................................................................................................................................2211.0011000000
........................GCAACAACAATGGTCAGCCGGGA------GCG---GA......................................................................................................................................................................................................................................................................................2811.0011000000
................................................................................................CCTCGTCCACGGTGAGCATAGCCAGC.........................................................................................................................................................................................................................2611.0011000000
..................................................................................................................TAGCCAGCAATCTGTCGGAGC............................................................................................................................................................................................................2111.0010000100
.....GAGTACCAGCAGCGCGCCAGCAAC......................................................................................................................................................................................................................................................................................................................2411.0010001000

Generated: 05/18/2015 at 12:25 AM