ID:

dps_1310

 Coordinate:

3:18978627-18978777 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.9 -4.1

Flybase annnotation

CDS [Dpse\GA25129-cds]; exon [dpse_GLEANR_16418:9]; intron [Dpse\GA25129-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTTTATCTAGATTAAAATCCCCAAAAAGAAAGAATAAAGCTTATTAATTATTAAACATATAAATATTTTGCAAATTTCGAACGCACCAACAAAATACCAACACCAAATATAATTATAGTTAATTACAGTCAACTTTCCTGACTCTCTCTATGTGTTCATTCAAAGCAATATAATATCGTTCTGACTACAAAACTTATAGGTAAACCCGCGCGCTCGCTCCGCAACGCCAACGCAACCTCGCTGGGGCCT
**************************************************************************............................................((.........((((.......)))).))******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M062
head
 M040
female body
 GSM444067
head
 V112
male body		 GSM343916
embryo
 M022
male body
..........................................................................AATTTCGAACGCACCAACA.............................................................................................................................................................. 19 0 1 2.00 2 0 0 2 0 0 0
....................................................................TTTGCAAATTTCGAACGCACCAACA.............................................................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0
................................................................ATATTTTGCAAATTTCGAACGCACC.................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0
..........................................................................AATTTCGAACGCACCAACAAAATACC....................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0
............................................................................TTTCGAACGCACCAACAAAATACC....................................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0 0
................................................................................................................................AGTCAACTTTCCTGACTCT........................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0
...............AAAATCCCCAAAAAGAAAGAATA..................................................................................................................................................................................................................... 23 0 1 2.00 2 0 1 1 0 0 0
......................................................................................................................................CTTTCCTGACTCTCTCTATGTGTT............................................................................................. 24 0 1 2.00 2 0 0 0 2 0 0
............................................................................................................................................................................................................AACCCGCGCGCTCGCTCCG............................ 19 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................ACTTATAGGTAAACCCGCGCGCTCGCTC.............................. 28 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................TATAATATCGTTCTGACTACA............................................................ 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................TTTTGCAAATTTCGAACGCACCA................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1
....................................................................................................................TTAGTTAATTACAGTCAACTTTCC............................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................GCAACGCCAACGCAACCTCGCTGGGGCC. 28 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................ATTATAGTTAATTACAGTCAACTTTCC............................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
....................................................................TTTGCAAATTTCGAACGCACCA................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................TTCAAAGCAATATAATATCGTTCC................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
....................................................................TTTGCAAATTTCGAACGCACC.................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
......................................................................TGCAAATTTCGAACGCACCAACA.............................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................CATTCAAAGCAATATAATATCGTTCTGAC................................................................ 29 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................ACGCCAACGCAACCTCGCTGGGGCC. 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................ATTATAGTTAATTACAGTC....................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCC..................... 22 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................TCAAAGCAATATAATATCGTTCTG.................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCCAACGCA............... 28 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................ATATAATATCGTTCTGACTACAA........................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................TAGTTAATTACAGTCAACTTTCCT.............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................AACGCACCAACAAAATACCAACACC................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
..................................................................ATTTTGCAAATTTCGAACGCACC.................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................TCGTTCTGACTACAAAACT....................................................... 19 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................CGCTCGCTCCGCAACGCCAACGCAACCTC.......... 29 0 1 1.00 1 1 0 0 0 0 0
...........................................................................ATTTCGAACGCACCAACAAAATACC....................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................TCACAGACAGCTTTCCTGACTC......................................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0
......................................................................................................................................................................................................TAGGTAAACCCGCGCGCTCGCT............................... 22 0 1 1.00 1 0 0 0 1 0 0
.................................................................TACTTTGCAAATTTCGAACGCACC.................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................ATTCAAAGCAATATAATATCGTTCTG.................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................CGATGTGTTCATTCAAAGCAATAT.............................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................AACCCGCGCGCTCGCTCCGCAAC........................ 23 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................ACGCAACCTCGCTGGGGCC. 19 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................GCGCTCGCTCCGCAACGCCAAC.................. 22 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................AATGACAGTCAGCTTTCATGACT.......................................................................................................... 23 3 1 1.00 1 0 0 0 0 1 0
................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCCAAC.................. 25 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................GCGCTCGCTCCGCAACGCCAACG................. 23 0 1 1.00 1 1 0 0 0 0 0
..................................................................................ACGCACCAACCAAATACCAACACC................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TAACCCGCGCGCTCGCTCCGCAAC........................ 24 1 1 1.00 1 1 0 0 0 0 0
....................................................TTAAACATATAAATATTTTGCA................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................GCTCGCTCCGCAACGCCAACG................. 21 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................ATAATATCGTTCTGACTACAAAACT....................................................... 25 0 1 1.00 1 1 0 0 0 0 0
......................................................................TGCAAATTTCGAACGCACCA................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................AATTATAGTTAATTACAGTCAACTTTCC............................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................TTCAAAGCAATATAATATCGTTCTGACT............................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................CTCTCTATGTGTTCATTCAAAGC................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................TACAAAACTTATAGGTAAACC........................................... 21 0 1 1.00 1 1 0 0 0 0 0
............................................................................TTTCGAACGCACCAACAAAATA......................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................CTCTATGTGTTCATTCAAAGC................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................ATCGTTCTGACTACAAAACTT...................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................ATATCGTTCTGACTACAAA.......................................................... 19 0 1 1.00 1 0 1 0 0 0 0
............................................................ATAAATATTTTGCAAATTTCGAACGCACC.................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................AAGCAATATAATATCGTTCTGACTACA............................................................ 27 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................AGCAATATAATATCGTTCTGACT............................................................... 23 0 1 1.00 1 0 1 0 0 0 0
...............AAAATCCCCAAAAAGAAAGAA....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................CACCAACAAAATACCAACACCAAATA............................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................TTCGAACGCACCAACAAAATACC....................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................TTCTGACTACAAAACTTATAG.................................................. 21 0 1 1.00 1 0 0 0 0 0 1
..............................................................................................................................................................................................................................GCAACGCCAACGCAACCTCGCTGGGGCCT 29 0 1 1.00 1 1 0 0 0 0 0
...............................................................................CGAACGCACCAACAAAATACC....................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..........................................................................AATTTCGAACGCACCAACAA............................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................................................CGCGCTCGCTCCGCAACGCC..................... 20 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................CCCGCGCTCGCTCCGCAACGCCAACGCT............... 28 2 1 1.00 1 0 0 1 0 0 0
..............................................................AAATATTTTGCAAATTTCGAACGCACCA................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
...................................................................TTTTGCAAATTTCGAACGCACC.................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................AAAGCAATATAATATCGTTCT................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................ATCGTTCTGACTACAAAACTTA..................................................... 22 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................AACACCAAATATAATTATAGT.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...................................ATAAAGCTTGAGAATTATTAAAC................................................................................................................................................................................................. 23 3 3 0.33 1 0 0 0 0 1 0
............................................................................................................................................................................TAATATTGTTCTGATTAGAA........................................................... 20 3 17 0.06 1 0 0 0 0 1 0
...................................................................................................................................................................................................................................TCCAACGCAACCTGGCTGG..... 19 2 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

AAAAAATAGATCTAATTTTAGGGGTTTTTCTTTCTTATTTCGAATAATTAATAATTTGTATATTTATAAAACGTTTAAAGCTTGCGTGGTTGTTTTATGGTTGTGGTTTATATTAATATCAATTAATGTCAGTTGAAAGGACTGAGAGAGATACACAAGTAAGTTTCGTTATATTATAGCAAGACTGATGTTTTGAATATCCATTTGGGCGCGCGAGCGAGGCGTTGCGGTTGCGTTGGAGCGACCCCGGA
********************************************************************************************************............................................((.........((((.......)))).))************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
 SRR902011
testis
.............................CGTTCTTATTTGTAATAATTAAT....................................................................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................TGGGCGCGCGAGCGAGGCGTT......................... 21 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................CGTTGCGGTTGCGTTGGAG.......... 19 0 1 1.00 1 1 0 0 0
...............................................................................................................................................GAGAGAGATACACAAGTAAGT....................................................................................... 21 0 1 1.00 1 0 1 0 0
...................................................................................................................................GTTGGAAGGACTGAGAGTGA.................................................................................................... 20 2 3 0.33 1 1 0 0 0
................................................................................................................................................................................................................................TTGCGGTTGTGTTGGAGG......... 18 2 20 0.10 2 0 1 0 1
.................................................................................................TGCTAGTGCTTTATATTAAT...................................................................................................................................... 20 3 18 0.06 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:18978577-18978827 + dps_1310 TTT---TTTATCTAGATTAAAATCCCCAAAAAGAAAGAA------------TAAAGCT-TATTA---ATTAT-----TAAACATA-----TA---A-ATA--T------TTTGC---------------AAATTTCG-AACG--------C------A-C------CA-ACAAAATACCA-ACACCAA-ATATA-ATTATAGTTA-------------------ATTACAGTCAA---CTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAAA--------------------------GCAATATA-----ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCAACGCCAACGCAACCTCGCTGGGGCCT
droPer2 scaffold_242:10280-10530 + TTT---TTTATCTAGATTAAAATCCCCAAAAAGAAAGAA------------TAAAGCT-TATTA---ATTAT-----TAAACATA-----TA---A-ATA--T------TTTGC---------------AAATTTCA-AACG--------C------A-C------CA-ACAAAATACCA-ACACCAA-ATATA-ATTATAGTTA-------------------ATTACAGTCAA---CTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAAA--------------------------GCAATATA-----ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCACAACGCCAACGCAACCTCGCTGGGGCCT
droWil2 scf2_1100000004558:863918-864209 - dwi_1490 CC---------TTAGATTAAAATACCGAAAAAGAAAGAA---AGCTTAGCTTAAAGCT-TATTA---ATTAACT----CTACATATTATATACATATTCA--TTTTCGTTTTGCCAAAAGAAAAAAAGAAAATTTTG-AAAAACCTTTCGC------CTATG----------------------CCAAAATTTA--------------GA--TACTTTTAAT---CCTCAGTCTT--GGCTTCCTGCTAAC-TCTACTCTATGTGTTCACTCAAAAA------------------------GCAATATA--ATAACATCGTTCTGACTACA------AA---------ATTT--ATAGGTAAACCCGCGCACACGATCCGAAACGCCAACCCAACCACGATGGGGTCT
droVir3 scaffold_12875:17282273-17282505 - dvi_7455 T----------CTAGATTAAAACGCCCAAAAAGAAAGAA------------TAAAGCC-TATTTCAAATA-T-----------------------ATTTACTT-ATTG-TTTGCGC-------------AAATTT-A-AACG--------C------CCCCCT---AA-AC----------GCACCAA-A-------------------A--TATTT-ATGC---TCTAAGTCAA--ACTTTCCCG---A------CTCTATGTGTTCATTCAAA--------------------------TAAA--CA--ATAATATCGTTCTGACTACA------AAA--------ACTT--ATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGATGGGGCCA
droMoj3 scaffold_6496:10728126-10728386 + dmo_1084 ATG---CTTTTCTAGATTAAAACGCCCAAAAAGAAAGAA------------TAAAGCT-TATTTCA-ATTATATTTATATACATATT----ATA-T-ACT--C------TTTGCGC-------------AAATTT-A-AACG--------C------CTCCCT---CT-AAA--------TGCATCAA-AATT--------------------ATTT-ATGC---TCTAAGTCTA---CTTTCCCG---A------CTCTATGTGTTCATTCAAA--------------------------TAAAT--T--ATAATATCGTTCTGACTACA------AAA--ATAAAAACTTATATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGCTGGGGCCA
droGri2 scaffold_15245:16797736-16798009 - TCT------TTTTAGATTAAAACGCCCAAAAAGAAAGAA------------TAAAGCT-TATTTCA-ATTATCTTAAT--ATATA-----TA---A-ATA--T---TG-TTTGCGC-------------AAATTT-A-AACG--------C------CTCCCC---AA-AC----------GCACCAA-A-------------------A--TACTT-ATGC---TCTAAGTCAA---CTTGCCCG---A------CTCTATGTGTTCATTCAAAGATCAAAAAAGAAAGAAGAAAAA---TAAA--CA--ATAATTTCGTTCTGACTACACTTACAAA---------ACTTATATAGGTTAACCCTCGAGCTCGCTCTGAAACTCCATCGCAACCACGCTGGGGCCA
droAna3 scaffold_13266:11877351-11877603 + dan_1955 TTTCTTTTTCTCTAGATTAAAATACCCAAAAAGAAAGAA------------TAATGCT-TGTTA---ACA-C-----AAAAC---------------ACA--C------TTTGCCAGACT--------CGAATTTCG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------AT-A----TACATCG--AGCT--TAGC---CCTCAGTCTA---TTTTCCTG---A------C--TATGTGTTCATTAAAAA--TTA---------------TTTATGCA-T-----AT-ATATCCTTCTGACTCCA------ACC--AT----CCCA--ATAGGCAATCCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCT
droBip1 scf7180000396547:600063-600307 - T------------AGATTAAAATACCCAAAAAGAAAGAA------------TAATGCT-TGTTA---ACA-C-----AAAACA-------------CTTA----------TTGCCAGATT--------CGAGTTTTG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------AT-A----TACATCG--AGCT--TAGC---CCTCAGTCTA---TTTTCCTG---A------C--TATGTGTTCATTCAAAAATTTA---------------TTTATGCA-T-----AT-ATATCCTTCTGACTTCA------AAACCAT----CCCA--ATAGGCACACCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCT
droKik1 scf7180000302385:1079327-1079564 - CTC---TTATTACAGATTAAGATACCCAAAAAGAAAGAA------------TAAAGCTTTATTA---ATA-C-----AAAAA-------------ATCTA--A------TTTGC---------------CAATTTCG-AACGC-----CGCCTCCGCCTCCCT---CA-GCC--------AGCACCAA-A--CA-AT-A----TA---------CA-----------------------TATCCTG---AA-TCT-CTATATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCATCGCAACCACGCTGGGGCCT
droFic1 scf7180000453948:1098101-1098348 - TCT----AATTCCAGATTAAAATACCCAAAAAGAAAGAT---G------AATAAAGCC-TATTA---ATA-C-----A-----------------ATTTA--C------TTTGCAA--------------TATTTCG-AACG--------C------CTCCCT---CG-ACA--------AGCACCAA-ATATA-AT-A----TATATCA--TACTC-TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCT
droEle1 scf7180000491107:851794-852051 - T----------ACAGATTAAAATACCCAAAAAGAAAGAA---GA---AGCTTAAAGCC-TATTA---ATA---------TACA------------ATTTA--T------TTTGCAA--------------AAATTCG-AACG--------C------CTCCTC---CA-ACAAA-----A-GCACCAA-ATACA-ATTACAATTATATCATATACT--TAGC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGAGCTCGCTCCGCCACGCCAACACAATCACGCTGGGGCCT
droRho1 scf7180000779911:249256-249502 + T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCT---CA-ACA--------AGCACCAA-ATACA-ATTACAATTATATCA--TACT--TAGC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATA-A--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCT
droBia1 scf7180000302292:2022055-2022311 - TT------ATTCCAGATTAAAATACCCAAAAAGAAAGAATCCG------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAGTTTCG-AACG--------C------CTCCCT---CA-GCA--------AGCACCAA-ATACA-ATTACAATTAT-TCA--TACT--TAGC---TCTCAGTCTA---CTTTCCTG---ACCTGA-CTCTATGTGTTCAATCAAAA-------------------------GCCATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCTGCCACTCCAACGCAACCACGCTGGGGCCT
droTak1 scf7180000415795:714152-714405 + TT------ATTCCAGATTAAAATACCCAAAAAGAAAGAATCCG------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--C------TTTGC---------------AAATTTCG-AACG--------C------CTCCCT---CA-ACAAA-----A-GCACCAA-ATACA-ATTACAACTATATCA--TACT--TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACTCCAACGCAACCACGCTGGGGCCT
droEug1 scf7180000409672:758144-758399 - ATT---TTATTCCAGATTAAAATACCGAAAAAGAAAGAA---GA---AGAATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAATTTCAAAACG--------C------CTCCCT---CA-ACA--------AACACCAA-ATACA-ATTATATTTATATTA--CACT--TAAC---CCTTGGTCTA---CTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------CA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCTACTCCAACGCAAACACGCTGGGGCCT
dm3 chr2R:11847332-11847589 - T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----AATACA------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCTCTTCAAGCA--------AGCACCAA-ATACAAATTACAATTATATCA--TACT--TAGCCCACCTCAGTCTT---CTTTCCTG---A------CCCTATGTGTTCACTCCAA--------------------------CCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGATGGGGTCT
droSim2 2r:12517422-12517633 - dsi_23260 T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----AATACA------------GTTTA--T------TTTGC---------------AAATTTCA-AACG--------C------CT-----------------------------------------------------------TAGCCATCCTTAGTCTT---CTTTCCTG---A------CCCCATGTGTTCACTCCAA--------------------------CCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCT
droSec2 scaffold_1:9347298-9347558 - T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----AATACA------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCTCTCCA-GCAA------A-GCACCAA-ATACA-ATTACAATTATATCA--TACT--TAGCCATCCTTAATCTT---CTTTCCTG---AC-TGA-CCCTATGTGTTCACTCCAA--------------------------CCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCT
droYak3 2R:17134564-17134811 + T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCT--TCA-AC---------AGCACCGAAATACA-ATTACAATTATATCA--TACT--TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCACTCAAT--------------------------GCAATACACTAT-ATATCGTTCTGACTACA------CA---------ACTT--ATAGGTAAACCCGCGCGCTCGATCCGCCACGCCAACGCAACCACGCTGGGGCCT
droEre2 scaffold_4845:14010442-14010686 + T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAAT-TCG-AACG--------C------CTCCCT--TCA-AC---------AGCACCAAAATACA-ACTACAATTATATCA--TACT--TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCACTCAAT--------------------------GCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCCCGCGCTCGATCCGCCACACCAACGCAACCACGCTGGGGCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTT---TTTATCTAGATTAAAATCCCCAAAAAGAAAGAA------------TAAAGCT-TATTA---ATTAT-----TAAACATA-----TA---A-ATA--T------TTTGC---------------AAATTTCG-AACG--------C------A-C------CA-ACAAAATACCA-ACACCAA-ATATA-ATTATAGTTA-------------------ATTACAGTCAA---CTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAAA--------------------------GCAATATA-----ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCAACGCCAACGCAACCTCGCTGGGGCCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................AATTTCG-AACG--------C------A-C------CA-ACA............................................................................................................................................................................................................................................1912.0020000020000
.............................................................................................................TTTGC---------------AAATTTCG-AACG--------C------A-C------CA-ACA............................................................................................................................................................................................................................................2512.0020200000000
.................................................................................................ATA--T------TTTGC---------------AAATTTCG-AACG--------C------A-C------C.................................................................................................................................................................................................................................................2512.0020002000000
..................................................................................................................................AATTTCG-AACG--------C------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2612.0020101000000
....................................................................................................................................TTTCG-AACG--------C------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2412.0020101000000
.....................................................................................................................................................................................................................................AGTCAA---CTTTCCTG---AC-TCT-........................................................................................................................................................1912.0020200000000
..................AAAATCCCCAAAAAGAAAGAA------------TA...................................................................................................................................................................................................................................................................................................................................................................2312.0020100010000
..............................................................................................................................................................................................................................................CTTTCCTG---AC-TCT-CTCTATGTGTT.............................................................................................................................................2412.0020000002000
.........................................................................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCCG............................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................ACTT--ATAGGTAAACCCGCGCGCTCGCTC..............................2811.0010001000000
.................................................................................................................................................................................................................................................................................................................TATA-----ATATCGTTCTGACTACA------.......................................................................2111.0010001000000
......................................................................................................T------TTTGC---------------AAATTTCG-AACG--------C------A-C------CA-...............................................................................................................................................................................................................................................2311.0011000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCAACGCCAACGCAACCTCGCTGGGGCC.2811.0010001000000
...................................................................................................................................................................................................ATTATAGTTA-------------------ATTACAGTCAA---CTTTCC....................................................................................................................................................................2711.0010001000000
.............................................................................................................TTTGC---------------AAATTTCG-AACG--------C------A-C------CA-...............................................................................................................................................................................................................................................2211.0010100000000
.............................................................................................................................................................................................................................................................................TTCAAA--------------------------GCAATATA-----ATATCGTTCC....................................................................................2411.0010001000000
.............................................................................................................TTTGC---------------AAATTTCG-AACG--------C------A-C------C.................................................................................................................................................................................................................................................2111.0010000010000
...............................................................................................................TGC---------------AAATTTCG-AACG--------C------A-C------CA-ACA............................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................CATTCAAA--------------------------GCAATATA-----ATATCGTTCTGAC.................................................................................2911.0010001000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGCCAACGCAACCTCGCTGGGGCC.2511.0010001000000
...................................................................................................................................................................................................ATTATAGTTA-------------------ATTACAGTC...............................................................................................................................................................................1911.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCC.....................2211.0010001000000
..............................................................................................................................................................................................................................................................................TCAAA--------------------------GCAATATA-----ATATCGTTCTG...................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCCAACGCA...............2811.0010001000000
................................................................................................................................................................................................................................................................................................................ATATA-----ATATCGTTCTGACTACA------A......................................................................2311.0010100000000
.......................................................................................................................................................................................................TAGTTA-------------------ATTACAGTCAA---CTTTCCT...................................................................................................................................................................2411.0010001000000
..........................................................................................................................................AACG--------C------A-C------CA-ACAAAATACCA-ACACC..............................................................................................................................................................................................................................2511.0010001000000
...................................................................................................A--T------TTTGC---------------AAATTTCG-AACG--------C------A-C------C.................................................................................................................................................................................................................................................2311.0010001000000
.............................................................................................................................................................................................................................................................................................................................TCGTTCTGACTACA------AA---------ACT.........................................................1911.0010001000000
.................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCTCCGCAACGCCAACGCAACCTC..........2911.0010001000000
...................................................................................................................................ATTTCG-AACG--------C------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................TAGGTAAACCCGCGCGCTCGCT...............................2211.0010000001000
............................................................................................................................................................................................................................................................................ATTCAAA--------------------------GCAATATA-----ATATCGTTCTG...................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCCGCAAC........................2311.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACGCAACCTCGCTGGGGCC.1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCCGCAACGCCAAC..................2211.0010001000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCCGCAACGCCAAC..................2511.0010001000000
................................................................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCCGCAACGCCAACG.................2311.0010001000000
.......................................................................T-----TAAACATA-----TA---A-ATA--T------TTTGC---------------A......................................................................................................................................................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................GCTCGCTCCGCAACGCCAACG.................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................ATA-----ATATCGTTCTGACTACA------AA---------ACT.........................................................2511.0010001000000
...............................................................................................................TGC---------------AAATTTCG-AACG--------C------A-C------CA-...............................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................A-ATTATAGTTA-------------------ATTACAGTCAA---CTTTCC....................................................................................................................................................................2811.0010001000000
.............................................................................................................................................................................................................................................................................TTCAAA--------------------------GCAATATA-----ATATCGTTCTGACT................................................................................2811.0010001000000
.............................................................................................................................................................................................................................................................CT-CTCTATGTGTTCATTCAAA--------------------------GC.........................................................................................................2311.0010001000000
.......................................................................................................................................................................................................................................................................................................................................TACA------AA---------ACTT--ATAGGTAAACC...........................................2111.0010001000000
....................................................................................................................................TTTCG-AACG--------C------A-C------CA-ACAAAATA.......................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................CTCTATGTGTTCATTCAAA--------------------------GC.........................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................ATCGTTCTGACTACA------AA---------ACTT--......................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................ATATCGTTCTGACTACA------AA---------............................................................1911.0010100000000
....................................................................................A-----TA---A-ATA--T------TTTGC---------------AAATTTCG-AACG--------C------A-C------C.................................................................................................................................................................................................................................................2911.0010001000000
.................................................................................................................................................................................................................................................................................AA--------------------------GCAATATA-----ATATCGTTCTGACTACA------.......................................................................2711.0010100000000
..................................................................................................................................................................................................................................................................................A--------------------------GCAATATA-----ATATCGTTCTGACT................................................................................2311.0010100000000
..................AAAATCCCCAAAAAGAAAGAA------------.....................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................C------A-C------CA-ACAAAATACCA-ACACCAA-ATA........................................................................................................................................................................................................................2611.0010001000000
.....................................................................................................................................TTCG-AACG--------C------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................TTCTGACTACA------AA---------ACTT--ATAG..................................................2111.0011000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCAACGCCAACGCAACCTCGCTGGGGCCT2911.0010001000000
.......................................................................................................................................CG-AACG--------C------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................AATTTCG-AACG--------C------A-C------CA-ACAA...........................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCAACGCC.....................2011.0010100000000
...........................................................................................A---A-ATA--T------TTTGC---------------AAATTTCG-AACG--------C------A-C------CA-...............................................................................................................................................................................................................................................2811.0010100000000
......................................................................................................T------TTTGC---------------AAATTTCG-AACG--------C------A-C------C.................................................................................................................................................................................................................................................2211.0010001000000
................................................................................................................................................................................................................................................................................AAA--------------------------GCAATATA-----ATATCGTTCT....................................................................................2111.0010000010000
............................................................................................................................................................................................................................................................................................................................ATCGTTCTGACTACA------AA---------ACTT--A.....................................................2211.0010100000000
...................................................................................................................................................................................A-ACACCAA-ATATA-ATTATAGT.............................................................................................................................................................................................................2111.0010001000000
droPer2
TTT---TTTATCTAGATTAAAATCCCCAAAAAGAAAGAA------------TAAAGCT-TATTA---ATTAT-----TAAACATA-----TA---A-ATA--T------TTTGC---------------AAATTTCA-AACG--------C------A-C------CA-ACAAAATACCA-ACACCAA-ATATA-ATTATAGTTA-------------------ATTACAGTCAA---CTTTCCTG---AC-TCT-CTCTATGTGTTCATTCAAA--------------------------GCAATATA-----ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCACAACGCCAACGCAACCTCGCTGGGGCCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................CTCCACAACGCCAACGCAACCT...........2211.001010000
..........................................................................................................................................AACG--------C------A-C------CA-ACAAAATACCA-ACACC..............................................................................................................................................................................................................................2511.001010000
......................................................................................................................................................................................................................................GTCAA---CTTTCCTG---AC-TCT-CTCT....................................................................................................................................................2211.001010000
......................................................................................................................................TCA-AACG--------C------A-C------CA-ACAAAATACC.....................................................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................................................................................ACAGTCAA---CTTTCCTG---AC-TCT-CTCTATGT................................................................................................................................................2911.001010000
....................................................................................................................................................................................................................................................................................................................A-----ATATCGTTCTGACTACA------AA---------ACTT--A.....................................................2511.001010000
.................................................................................................................................................................................................A-ATTATAGTTA-------------------ATTACAGTCAA---C.........................................................................................................................................................................2311.001010000
.....................................................................................................................................................................................................................................................G---AC-TCT-CTCTATGTGTTCATTCAAA--------------------------...........................................................................................................2511.001010000
................................................................................................................................................................................................................................................................CTCTATGTGTTCATTCAAA--------------------------G..........................................................................................................2011.001000100
.............................................................................................................................................................................................................................................................................................................................TCGTTCTGACTACA------AA---------ACT.........................................................1911.001010000
................................GAAAGAA------------TAAAGCT-TATTA---ATT..................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................TCAA---CTTTCCTG---AC-TCT-CTC.....................................................................................................................................................2011.001010000
.................................................................................................................................................................................................................................................................................................................................................AA---------ACTT--ATAGGTAAACCCGCG.......................................2111.001000100
........................................................................................................................................................................................................AGTTA-------------------ATTACAGTCAA---CTTTCCTG---AC-T...........................................................................................................................................................2711.001010000
..........................................................................................................................................................................................................................................A---CTTTCCTG---AC-TCT-CTCTATGTGTTC............................................................................................................................................2611.001010000
....................................................................................................................................................................................................................................................TG---AC-TCT-CTCTATGTGTTCA...........................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCCACA..........................2111.001010000
droWil2
CC---------TTAGATTAAAATACCGAAAAAGAAAGAA---AGCTTAGCTTAAAGCT-TATTA---ATTAACT----CTACATATTATATACATATTCA--TTTTCGTTTTGCCAAAAGAAAAAAAGAAAATTTTG-AAAAACCTTTCGC------CTATG----------------------CCAAAATTTA--------------GA--TACTTTTAAT---CCTCAGTCTT--GGCTTCCTGCTAAC-TCTACTCTATGTGTTCACTCAAAAA------------------------GCAATATA--ATAACATCGTTCTGACTACA------AA---------ATTT--ATAGGTAAACCCGCGCACACGATCCGAAACGCCAACCCAACCACGATGGGGTCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACTACA------.......................................................................21114.0014131000
................................................................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGACTACA------.......................................................................2518.00880000
...................................................................................................................................................................................................................................TCAGTCTT--GGCTTCCTGCTAAC-TC..........................................................................................................................................................2417.00770000
..................................................................................................................................................................................................................................................................................................................ATA--ATAACATCGTTCTGACTACA------.......................................................................2316.00660000
..............................................................................................................................................................................................TTTA--------------GA--TACTTTTAAT---CCT....................................................................................................................................................................................1915.00550000
...............................................................................................................................................................................................................................................................................................................AATATA--ATAACATCGTTCTGACTACA------.......................................................................2615.00550000
...................................................................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACTACA------.......................................................................2214.00431000
.......................................................................................................................................................................................................................................................................................................................ATAACATCGTTCTGACTACA------.......................................................................2014.00440000
................................................................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGACT................................................................................2214.00440000
...............................................................................................ATTCA--TTTTCGTTTTGCCAAAAG................................................................................................................................................................................................................................................................................................2314.00440000
............................................................................................................................................................................................................................AT---CCTCAGTCTT--GGCTTCCTGCTAAC-TC..........................................................................................................................................................2814.00440000
....................................................................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACTACA------A......................................................................2213.00330000
.............................................................................................................................AAGAAAATTTTG-AAAAACC.......................................................................................................................................................................................................................................................................1913.00330000
................................................................................................TTCA--TTTTCGTTTTGCCA....................................................................................................................................................................................................................................................................................................1813.00330000
........................................................................................................................................................................................................................................................................................................................TAACATCGTTCTGACTACA------AA---------A...........................................................2212.00220000
................................................................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGA..................................................................................2012.00220000
..................................................................................................................................................................................................................................................................................................................ATA--ATAACATCGTTCTGACT................................................................................2012.00220000
....................................................................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACT................................................................................1812.00220000
..................................................................................................................................................................................................................................................................CTATGTGTTCACTCAAAAA------------------------GCA........................................................................................................2212.00202000
.............................................................................................................................................................................................................................................................................................................GCAATATA--ATAACATCGTTCTGACTACA------.......................................................................2812.00220000
..............................................................................................TATTCA--TTTTCGTTTTGCC.....................................................................................................................................................................................................................................................................................................1912.00220000
........................................................................................................................................................................................................................................................................................................................TAACATCGTTCTGACTACA------.......................................................................1912.00220000
................................................................................................................................................................................................................................................................................................................ATATA--ATAACATCGTTCTGACTACA------A......................................................................2612.00220000
.................................................................................................................................................................................................................................................................................................................................TCTGACTACA------AA---------ATTT--ATAGGT................................................2212.00220000
.........................................................................................ATACATATTCA--TTTTCGTT..........................................................................................................................................................................................................................................................................................................1912.00220000
.........................................................................................................................................................................................................................................................................................................................AACATCGTTCTGACTACA------.......................................................................1812.00220000
....................................................................................................................................................................................................................................................................................A------------------------GCAATATA--ATAACATCGTTCTGACTACA------.......................................................................2912.00220000
...................................................................................TATTATATACATATTCA--TTTTCGTT..........................................................................................................................................................................................................................................................................................................2512.00220000
...................................................................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACTACA------A......................................................................2312.00220000
.................................................................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACTA...............................................................................2212.00220000
......................................................................................................................................................................................................................................GTCTT--GGCTTCCTGCTAAC-TCTACT......................................................................................................................................................2512.00220000
...............................................................................................................................................................ATG----------------------CCAAAATTTA--------------GA--TACTTTTA............................................................................................................................................................................................2311.00101000
...............................................................................................ATTCA--TTTTCGTTTTGCC.....................................................................................................................................................................................................................................................................................................1811.00110000
.....................................................................................................................................TTTG-AAAAACCTTTCGC------CTATG----------------------CC..............................................................................................................................................................................................................................2411.00110000
...................................................................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACTACA------AA---------............................................................2411.00110000
...................................................................................................................................................................................................................................................................................................................................................................................CACGATCCGAAACGCCAACCCAACCACG.........2811.00110000
.....................................................................................................................................................................................................................................AGTCTT--GGCTTCCTGCTAAC-TCTACT......................................................................................................................................................2611.00110000
......................................................................................................................................................................................................................................................................................................................................................................................GATCCGAAACGCCAACCCAA..............2011.00110000
....................................................................................ATTATATACATATTCA--TTTTCGTTTTGCC.....................................................................................................................................................................................................................................................................................................2911.00110000
.............................................................................................ATATTCA--TTTTCGTTTTGCC.....................................................................................................................................................................................................................................................................................................2011.00110000
..............................................................................................................................................................................................................................................................................................................................................................................GCGCACACGATCCGAAACGCC.....................2111.00101000
...............................................................................................................................................................................................................................................................................................................AATATA--ATAACATCGTTCTGG..................................................................................2111.00110000
................................................................................................TTCA--TTTTCGTTTTGCCAAAAG................................................................................................................................................................................................................................................................................................2211.00110000
....................................................................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACG................................................................................1811.00110000
...............................................................................................................................................................................................................................................................................................................AATATA--ATAACATCGTTCTGA..................................................................................2111.00110000
.................................................................................................................................................................................................................................CCTCAGTCTT--GGCTTCCTGCTAAC-TC..........................................................................................................................................................2611.00110000
.................................................................................................................................................................................................................................................................................................................................................................................CACACGATCCGAAACGCC.....................1811.00110000
....................................................................................................................................................................................................................................................................................................................A--ATAACATCGTTCTGACTACA------AA---------............................................................2311.00110000
.................TAAAATACCGAAAAAGAAAGAA---..............................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.................................................................................................................................................................................................................................................................................................................................TCTGACTACA------AA---------ATTT--ATAGGTAAACC...........................................2711.00110000
...................................................................................................................................................................................................................................TCAGTCTT--GGCTTCCTGCTAAC-TCTACT......................................................................................................................................................2811.00110000
.........................................................................................................................AAAAAAGAAAATTTTG-AAAAACC.......................................................................................................................................................................................................................................................................2311.00101000
............................................................................................................................AAAGAAAATTTTG-AAAAACCTTTCGC------CT.........................................................................................................................................................................................................................................................2811.00101000
.................................................................................................................................................................................................................................................TCCTGCTAAC-TCTACTCTATGTGTTCA...........................................................................................................................................2711.00101000
...............................................................................................................................GAAAATTTTG-AAAAACCT......................................................................................................................................................................................................................................................................1811.00110000
......................................................................................TATATACATATTCA--TTTTCGTTTTGCCA....................................................................................................................................................................................................................................................................................................2811.00110000
............................................................................................................................AAAGAAAATTTTG-AAAAACCT......................................................................................................................................................................................................................................................................2111.00110000
..........................GAAAAAGAAAGAA---AGCTTAGCTT....................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.......................................................................................ATATACATATTCA--TTTTCGTTTTGCC.....................................................................................................................................................................................................................................................................................................2611.00110000
...................................................................................................................................ATTTTG-AAAAACCTTTCGC------CTATG----------------------CC..............................................................................................................................................................................................................................2611.00101000
.................................................................................................TCA--TTTTCGTTTTGCCAAAAG................................................................................................................................................................................................................................................................................................2111.00110000
.................................................................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACTACA------A......................................................................2511.00101000
.................................................................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACT................................................................................2111.00110000
............................................................................................................................................................................................................................AT---CCTCAGTCTT--GGCTTCCTGC.................................................................................................................................................................2211.00100001
.............................................................................................................................................................................................................................................................CTACTCTATGTGTTCACTCAAA.....................................................................................................................................2211.00101000
..................................................................................................................................................................................................................................................................................................................................CTGACTACA------AA---------ATTT--ATAGG.................................................2011.00110000
.........................................................................................................................................................................................................................................................................................................................................................................AACCCGCGCACACGATCCGAAACGCCA....................2711.00101000
.......................................................................................................................................................................................................................................................................................................................ATAACATCGTTCTGACTACA------AA---------A...........................................................2311.00110000
....................AATACCGAAAAAGAAAGAA---AGC...........................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................................................................CTCAGTCTT--GGCTTCCTGCTAAC-TCT.........................................................................................................................................................2611.00101000
............................................................................................................................................................................................................................................................................................................................................................ATTT--ATAGGTAAACCCGCGCACACG.................................2511.00110000
.................................................................................................................................................................................................................................................................................................................................TCTGACTACA------AA---------ATTT--ATAGGTAAACCCG.........................................2911.00110000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCACACGATCCGAAACGCC.....................2211.00100001
...................................................................................................................AAAAGAAAAAAAGAAAATTTTG-AAAAACC.......................................................................................................................................................................................................................................................................2911.00110000
...................................................................................................................................................................................................................................................................................................................TA--ATAACATCGTTCTGACT................................................................................1911.00110000
.................................................................................................................................................................................................................................................................................................................TATA--ATAACATCGTTCTGACTACA------.......................................................................2411.00110000
...........................................................................................ACATATTCA--TTTTCGTTTTGCCAA...................................................................................................................................................................................................................................................................................................2411.00101000
.................................................................................................................................................................................................................................................................................................................................................................................CACACGATCCGAAACGCCAACCCAACCA...........2811.00100100
...............................................................................................ATTCA--TTTTCGTTTTGCCAAAAGAAA.............................................................................................................................................................................................................................................................................................2611.00110000
..............................................................................................TATTCA--TTTTCGTTTTGCCAAAAG................................................................................................................................................................................................................................................................................................2411.00110000
droVir3
T----------CTAGATTAAAACGCCCAAAAAGAAAGAA------------TAAAGCC-TATTTCAAATA-T-----------------------ATTTACTT-ATTG-TTTGCGC-------------AAATTT-A-AACG--------C------CCCCCT---AA-AC----------GCACCAA-A-------------------A--TATTT-ATGC---TCTAAGTCAA--ACTTTCCCG---A------CTCTATGTGTTCATTCAAA--------------------------TAAA--CA--ATAATATCGTTCTGACTACA------AAA--------ACTT--ATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGATGGGGCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCA...........................................................................................................................................2415.005004000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACA------.......................................................................2015.005005000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ATCGTTCTGACTACA------AAA--------ACT.........................................................2113.003000000000000000003000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ATTT-ATGC---TCTAAGTCAA--ACTTTCCC...................................................................................................................................................................2613.003002000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................A--------------------------TAAA--CA--ATAATATCGTTCTGACTACA------.......................................................................2713.003002000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCAAA--------------------------TAAA--CA--.................................................................................................2813.003003000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................A-A-------------------A--TATTT-ATGC---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................2913.003003000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCC......................2113.003101000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCCCAACGCA...............2813.003003000000000000000000000000000000000000000000000000000000000000
.....................ACGCCCAAAAAGAAAGAA------------TAAAGCC-T............................................................................................................................................................................................................................................................................................................................................................2613.003002000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGT..............................................................................................................................................2112.002000000000000000001100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTGAAACCCCAACGCAACC............2512.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AAA--CA--ATAATATCGTTCTGAC.................................................................................2112.002000000000000000000110000000000000000000000000000000000000000000
...............ATTAAAACGCCCAAAAAGAAAG...................................................................................................................................................................................................................................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
...............ATTAAAACGCCCAAAAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TT-ATGC---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TAAA--CA--ATAATATCGTTCTGACTACA------.......................................................................2612.002001000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AATATCGTTCTGACTACA------AAA--------AC..........................................................2312.002001000000000000000010000000000000000000000000000000000000000000
......................................................................................................T-ATTG-TTTGCGC-------------AAATTT-A-AACG--------C------CC.........................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ATTT-ATGC---TCTAAGTCAA--ACT........................................................................................................................................................................2112.002001000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AA--------------------------TAAA--CA--ATAATATCGTTCTGACT................................................................................2512.002001000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CCCGCGCGCTCGCTCTGAAACCCC.....................2412.002000000000000000001100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CTTTCCCG---A------CTCTATGTGTTCATTC........................................................................................................................................2512.002000000000000000001000100000000000000000000000000000000000000000
................................GAAAGAA------------TAAAGCC-TATTTC.......................................................................................................................................................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
...........................AAAAAGAAAGAA------------TAAAGCC-.............................................................................................................................................................................................................................................................................................................................................................1912.002001000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................AACG--------C------CCCCCT---AA-AC----------GCACC..............................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................A--ATAATATCGTTCTGACTACA------.......................................................................2112.002001000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACC.......................2012.002100000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A--TATTT-ATGC---TCTAAGTCA..............................................................................................................................................................................1912.002001000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GTTAACCCGCGCGCTCGCT...............................1912.002001000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTCCCG---A------CTCTATGTGTTCATTCA.......................................................................................................................................2412.002001000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACA------AAA--------ACT.........................................................2612.002001000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G---A------CTCTATGTGTTCATTCA.......................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
....................AACGCCCAAAAAGAAAGAA------------TAAAGCC-T............................................................................................................................................................................................................................................................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
......................CGCCCAAAAAGAAAGAA------------TAAAGCC-T............................................................................................................................................................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACG--------C------CCCCCT---AA-AC----------GCACCA.............................................................................................................................................................................................................................2012.002001000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A------CTCTATGTGTTCATTCAAA--------------------------TAAA--CA--.................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTGCGC-------------AAATTT-A-AACG--------C------CCCCCT---AA-AC----------...................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................AAACGCCCAAAAAGAAAGAA------------TAAAGCC-.............................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................AGAAAGAA------------TAAAGCC-TATTTCAAA....................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................TACTT-ATTG-TTTGCGC-------------AAATTT-A-AAC...........................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................C----------GCACCAA-A-------------------A--TATTT-ATGC---TCTAAGTCAA--ACTTTCCCG---A------CTCT....................................................................................................................................................4311.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CT......................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................A-------------------A--TATTT-ATGC---TCTAAGTCA..............................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATAGGTTAACCCGCGCGCT...................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCCC.....................2211.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTATGTGTTCATTCAAA--------------------------TAAA--CA--A................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................AGAA------------TAAAGCC-TATTTCA......................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................AAAACGCCCAAAAAGAAAG...................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................A-A-------------------A--TATTT-ATGC---TCTAAGTCA..............................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CTCTATGT................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................T-ATGC---TCTAAGTCAA--ACTTTCCC...................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGACTA...............................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATGTGTTCATTCAAA--------------------------TAAA--CA--ATAATATCGTTCTGACTACA------AAA--------ACT.........................................................4811.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTGAAACCCCAACG.................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CT---AA-AC----------GCACCAA-A-------------------A--TATTT-ATGC---T......................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................C---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TCCCG---A------CTCTATGTGTTCA...........................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTT-ATGC---TCTAAGTCAA--ACT........................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATTT-ATGC---TCTAAGTCAA--...........................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................CGCCCAAAAAGAAAGAA------------TAAAGCC-.............................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GGTTAACCCGCGCGCTCGCTCT.............................2211.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................T---AA-AC----------GCACCAA-A-------------------A--TATTT-ATG...........................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATGC---TCTAAGTCAA--ACTTTCCC...................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................CCAA-A-------------------A--TATTT-ATGC---TCTAAGTCAA--AC.........................................................................................................................................................................2711.001000000000000000000010000000000000000000000000000000000000000000
..................AAAACGCCCAAAAAGAAAGA..................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................G-TTTGCGC-------------AAATTT-A-AACG--------C------CC.........................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACG--------C------CCCCCT---AA-AC----------GCACC..............................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TCCCG---A------CTCTATGTGTTCATTCAA......................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCTGG...........................2011.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATGTGTTCATTCAAA--------------------------TAAA--CA--ATA..............................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GC---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAACCACGATGGGGC..2011.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................T---AA-AC----------GCACCAA-A-------------------A--TATTT-..............................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CTCTATGTGT..............................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ATCGTTCTGACTACA------AAA--------A...........................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TAAA--CA--ATAATATCGTTCTGAC.................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................T-ATTG-TTTGCGC-------------AAATTT-A-AA............................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTT-ATGC---TCTAAGTCAA--ACTTTCCC...................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCATTC........................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AACCCCAACGCAACCACGA........1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TAAA--CA--ATAATATCGTTCTGA..................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCA.......................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATTT-ATGC---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AA-A-------------------A--TATTT-ATGC---TCTAAGTCAA--ACTTTC.....................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AA--------------------------TAAA--CA--ATAATATCGTTCTGACTACA------.......................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ACCCGCGCGCTCGCTCTG............................1811.001010000000000000000000000000000000000000000000000000000000000000
......................CGCCCAAAAAGAAAGAA------------T....................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................ATATCGTTCTGACTACA------AAA--------............................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G---A------CTCTATGTGTTCATTCAAA--------------------------TA.........................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GCGCGCTCGCTCTGAAACC.......................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCTGAAACCCCAACGCAACC............2911.001000000000000000001000000000000000000000000000000000000000000000
.................................AAAGAA------------TAAAGCC-TATTTCAAATA-T-----------------------ATT......................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGA..................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGTTCATTCAAA--------------------------TAAA--CA--.................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TAACCCGCGCGCTCGCTCTGA...........................2111.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................AACG--------C------CCCCCT---AA-AC----------GCACCA.............................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................A-AC----------GCACCAA-A-------------------A--TATTT-ATGC---T......................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................A-------------------A--TATTT-ATGC---TCTAAGTCAA--ACTTTCCC...................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
...............ATTAAAACGCCCAAAAAGAAAGA..................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................A-T-----------------------ATTTACTT-ATTG-TTTGCGC-------------AAATTT-A-A.............................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
............................AAAAGAAAGAA------------TAAAGCC-.............................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................CTCTATGTGTTCATTCAAA--------------------------TAAA--CA--AT...............................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CTTTCCCG---A------CTCTATGTGTTCATTCA.......................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AATATCGTTCTGACTACA------AAA--------ACT.........................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AATATCGTTCTGACTACA------AAA--------............................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AAA--CA--ATAATATCGTTCTGACTACA------.......................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTATGTGTTCATTCAAA--------------------------TAA........................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CG--------C------CCCCCT---AA-AC----------GCACCAA-...........................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................AGAAAGAA------------TAAAGCC-TATTTCAAATA-T-----------------------.........................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A--TATTT-ATGC---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACCAA-A-------------------A--TATTT-ATGC---TCTAAGTCA..............................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
....................................................................TA-T-----------------------ATTTACTT-ATTG-TTTGCGC-------------A......................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................A-------------------A--TATTT-ATGC---TCTAAGTCAA--...........................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTCCCG---A------CTCTATGTGTTCA...........................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................AAAGAA------------TAAAGCC-TATTTC.......................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TAACCCGCGCGCTCGCTCTGAAACCC......................2611.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTGAAACCCCAACGCAACCA...........2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTG-TTTGCGC-------------AAATTT-A-AACG--------C------CC.........................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCGCTCTGAAACCCCAACGC................2011.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGACTACA------AA.....................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AAA--------------------------TAAA--CA--ATAATATCGTTCTGACT................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
...............ATTAAAACGCCCAAAAAGAAA....................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................TTT-A-AACG--------C------CCCCCT---AA-AC----------GCACC..............................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCTGAAACCCCAAC..................2211.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATTT-ATGC---TCTAAGTCAA--AC.........................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CCG---A------CTCTATGTGTTCATTCAAA--------------------------...........................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACA------AAA--------AC..........................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AATATCGTTCTGACTACA------.......................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................T---AA-AC----------GCACCAA-A-------------------A--TATTT-ATGC---TCTA...................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGCTCTGAAACCCCA....................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATTT-ATGC---TCTAAGTCAA--ACTTTCCC...................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATAGGTTAACCCGCGCGCTCG.................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................A-AC----------GCACCAA-A-------------------A--TATTT-ATGC---TCTAAGT................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A--TATTT-ATGC---TCTAAGTCAA--ACTTTCCC...................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G---A------CTCTATGTGTTCATTCAAA--------------------------TAAA--CA--AT...............................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AA-A-------------------A--TATTT-ATGC---TCTAAGTCAA--AC.........................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................TAAAACGCCCAAAAAGAAAGAA------------TAAAGC...............................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCATTCAA......................................................................................................................................2911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TGC---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACGCAACCACGATGGGGCCA2011.001000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CAA--ACTTTCCCG---A------CTCTATGTGT..............................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAGTCAA--ACTTTCCCG---A------CTCTATGT................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TATCGTTCTGACTACA------AAA--------............................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AAA--------ACTT--ATAGGTTAACCCGC........................................2111.001000000000000000010000000000000000000000000000000000000000000000
.....................ACGCCCAAAAAGAAAGAA------------TAAAGCC-.............................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGTCAA--ACTTTCCCG---A------CTCTATGTGTTCA...........................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAAACCCCAACGCAACC............2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TGCGC-------------AAATTT-A-AACG--------C------CCC........................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CCT---AA-AC----------GCACCAA-A-------------------A--TATTT-..............................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CG--------C------CCCCCT---AA-AC----------GCACC..............................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................AATA-T-----------------------ATTTACTT-ATTG-TTTGCGC-------------.......................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TAATATCGTTCTGACTACA------AAA--------............................................................2211.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ATTT-ATGC---TCTAAGTCAA--ACTTTCC....................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................A--ATAATATCGTTCTGACTACA------AA.....................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTC............................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................A-AACG--------C------CCCCCT---AA-AC----------GCACC..............................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................AACGCCCAAAAAGAAAGAA------------TAAAGCC-.............................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
.................TAAAACGCCCAAAAAGAAAG...................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
................TTAAAACGCCCAAAAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............ATTAAAACGCCCAAAAAGA......................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GACTACA------AAA--------ACTT--ATAGGTTAACCC..........................................2611.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTC........................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CCAA-A-------------------A--TATTT-ATGC---TCT....................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGTTCTGACTACA------AAA--------ACTT--ATAGGT................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AAA--------ACTT--ATAGGTTAACCCGCG.......................................2211.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATGTGTTCATTCAAA--------------------------TAAA--CA--ATAAT............................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A--ACTTTCCCG---A------CTCTATGTGTTCATTCA.......................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................G-TTTGCGC-------------AAATTT-A-AACG--------C------C..........................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AA--CA--ATAATATCGTTCTGACTACA------AAA--------A...........................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACTTTCCCG---A------CTCTATGTGTTCA...........................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................GAAAGAA------------TAAAGCC-TATTTCA......................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................AACGCCCAAAAAGAAAGAA------------T....................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................T-A-AACG--------C------CCCCCT---AA-AC----------GCACC..............................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................AAAACGCCCAAAAAGAAAGAA------------TA...................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................ATTG-TTTGCGC-------------AAATTT-A-AACG--------C------CCCC.......................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AA--------------------------TAAA--CA--ATAATATCGTTC.....................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TCAA--ACTTTCCCG---A------CTCTAT..................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................A-AACG--------C------CCCCCT---AA-AC----------GCACCA.............................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CAA--ACTTTCCCG---A------CTCTATGTGTT.............................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................AAGAAAGAA------------TAAAGCC-TATTTCA......................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
..........................CAAAAAGAAAGAA------------TAAAGCC-TAT..........................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TTAACCCGCGCGCTCGCTCTGA...........................2211.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACG------.......................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCTATGTGTTCATTCAAA--------------------------TAAA--CA--.................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TCTGACTACA------AAA--------ACTT--ATAGGTT...............................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACCACGATGGGGCCA2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AAA--CA--ATAATATCGTTCTG...................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................ATTG-TTTGCGC-------------AAATTT-A-AA............................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GTTCTGACTACA------AAA--------ACTT--A.....................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATTT-ATGC---TCTAAGTCAA--ACTTTCCCG---...............................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.....................................................AAGCC-TATTTCAAATA-T-----------------------A........................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................ATTTACTT-ATTG-TTTGCGC-------------AAA....................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTCAAA--------------------------TAAA--CA--ATAATATCGTTCTG...................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................T-----------------------ATTTACTT-ATTG-TTTGCGC-------------A......................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................CT---AA-AC----------GCACCAA-A-------------------A--TATTT-ATGC---TC.....................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TAAGTCAA--ACTTTCCCG---A------CTCT....................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G---A------CTCTATGTGTTCATTC........................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TATTT-ATGC---TCTAAGTCAA--A..........................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............................AAAAGAAAGAA------------TAAAGCC-TA...........................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................ATTG-TTTGCGC-------------AAATTT-A-AACG--------C------CCC........................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................AC----------GCACCAA-A-------------------A--TATTT-ATGC---TCTAAGTCA..............................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................T-ATTG-TTTGCGC-------------AAATTT-A-AACG--------C------CCC........................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.................TAAAACGCCCAAAAAGAAAGAA------------T....................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A--TATTT-ATGC---TCTAAGTCAA--AC.........................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................TTTACTT-ATTG-TTTGCGC-------------AAATT..................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCAAA--------------------------TA.........................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCTGAAACCC......................1811.001001000000000000000000000000000000000000000000000000000000000000
...................AAACGCCCAAAAAGAAAG...................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGAAACCCCAACGCAACCA...........1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................ATTTACTT-ATTG-TTTGCGC-------------A......................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CCGCGCGCTCGCTCTGAAACCCCA....................2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATAGGTTAACCCGCGCGCTCGCT...............................2311.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACA------AAA--------............................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TT-A-AACG--------C------CCCCCT---AA-AC----------GCACC..............................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTATGTGTTCATTCAAA--------------------------TA.........................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTCCCG---A------CTCTATGTGTTCATTCAA......................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AACCCCAACGCAACCACGATGG.....2211.001000000000000000000010000000000000000000000000000000000000000000
.............................AAAGAAAGAA------------TAAAGCC-TATTTCAAAT...................................................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................TGCGC-------------AAATTT-A-AACG--------C------CCCCC......................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................T--ATAGGTTAACCCGCGCGCTC..................................2111.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AACCCGCGCGCTCGCTCTGA...........................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATGTGTTCATTCAAA--------------------------TAAA--C....................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTATGTGTTCATTCAAA--------------------------TAAA--CA--.................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TCTAAGTCAA--ACTTTCCCG---A------CTC.....................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................A-A-------------------A--TATTT-ATGC---TCTAAGT................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AA--ACTTTCCCG---A------CTCTATGTGTTCATT.........................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................T---AA-AC----------GCACCAA-A-------------------A--TATTT-A.............................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................AA-A-------------------A--TATTT-ATGC---TCTAAGTCA..............................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..................................................................AATA-T-----------------------ATTTACTT-ATTG-TTTGCGC-------------A......................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................TTTACTT-ATTG-TTTGCGC-------------A......................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................TAAAACGCCCAAAAAGAAAGAA------------TA...................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAAACCCCAACGCAACCA...........2311.001001000000000000000000000000000000000000000000000000000000000000
...................AAACGCCCAAAAAGAAAGAA------------TAAAGCC-T............................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GCGCGCTCGCTCTGAAACCCCAACGCAAC.............2911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTTCCCG---A------CTCTATGTGTTCA...........................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATAATATCGTTCTGACTACA------AAA--------ACTT--A.....................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TAATATCGTTCTGACTACA------.......................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AC----------GCACCAA-A-------------------A--TATTT-ATGC---T......................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................CTCTGAAACCCCAACGCAACC............2111.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
ATG---CTTTTCTAGATTAAAACGCCCAAAAAGAAAGAA------------TAAAGCT-TATTTCA-ATTATATTTATATACATATT----ATA-T-ACT--C------TTTGCGC-------------AAATTT-A-AACG--------C------CTCCCT---CT-AAA--------TGCATCAA-AATT--------------------ATTT-ATGC---TCTAAGTCTA---CTTTCCCG---A------CTCTATGTGTTCATTCAAA--------------------------TAAAT--T--ATAATATCGTTCTGACTACA------AAA--ATAAAAACTTATATAGGTTAACCCGCGCGCTCGCTCTGAAACCCCAACGCAACCACGCTGGGGCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................T--ATAATATCGTTCTGACTACA------.......................................................................2112.002200000
...........................................................................................................................................................................................A-AATT--------------------ATTT-ATGC---TCTAAGTCT..............................................................................................................................................................................2212.002200000
.................................................................................CATATT----ATA-T-ACT--C------TTTGCGC-------------A......................................................................................................................................................................................................................................................................................2211.001000001
...........................................................................................................................................................................................................................................................................................................................TATCGTTCTGACTACA------AAA--ATAAA.............................................................2411.001000001
....................................................................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTCAAA--------------------------TAAAT--T--A................................................................................................2911.001100000
........................................................................................................................................................................................................................................................................................................................................................AAAAACTTATATAGGTTAACCCGCGCGCT...................................2911.001100000
...............ATTAAAACGCCCAAAAAGAAAGAA------------.....................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...............................................................................................................................................................................................................................................................................................................AAT--T--ATAATATCGTTCTGACTACA------AAA--A.................................................................2811.001100000
.............................................................................................................................................................................................................................................................................................................................TCGTTCTGACTACA------AAA--ATAA..............................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................T--T--ATAATATCGTTCTGACT................................................................................1911.001100000
..................................................................................................CT--C------TTTGCGC-------------AAATTT-A-AACG--------C------CTCCCT---C.................................................................................................................................................................................................................................................2911.001100000
....................................................................................................................................................................................................................................................CG---A------CTCTATGTGTTCATTC........................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................AAT--T--ATAATATCGTTCTGAC.................................................................................2011.001100000
....................................................................................ATT----ATA-T-ACT--C------TTTGCGC-------------AAA....................................................................................................................................................................................................................................................................................2111.001000100
.................................................................................................................................................................................................................................................................................................................................TCTGACTACA------AAA--ATAAAAAC..........................................................2111.001100000
droGri2
TCT------TTTTAGATTAAAACGCCCAAAAAGAAAGAA------------TAAAGCT-TATTTCA-ATTATCTTAAT--ATATA-----TA---A-ATA--T---TG-TTTGCGC-------------AAATTT-A-AACG--------C------CTCCCC---AA-AC----------GCACCAA-A-------------------A--TACTT-ATGC---TCTAAGTCAA---CTTGCCCG---A------CTCTATGTGTTCATTCAAAGATCAAAAAAGAAAGAAGAAAAA---TAAA--CA--ATAATTTCGTTCTGACTACACTTACAAA---------ACTTATATAGGTTAACCCTCGAGCTCGCTCTGAAACTCCATCGCAACCACGCTGGGGCCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................TCGTTCTGACTACACTTACA.......................................................................2011.00110
...............ATTAAAACGCCCAAAAAGAAAGA..................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.......................................................................................................................................................................................................................TT-ATGC---TCTAAGTCAA---CTTGCCCG---...............................................................................................................................................................2411.00110
..................AAAACGCCCAAAAAGAAAGAA------------TAAAGCT-.............................................................................................................................................................................................................................................................................................................................................................2811.00110
..................AAAACGCCCAAAAAGAAAGAA------------TAAA.................................................................................................................................................................................................................................................................................................................................................................2511.00110
..........................................................................................................................................................................................................................ATGC---TCTAAGTCAA---CTTGCCCG---A------CT......................................................................................................................................................2511.00110
droAna3
TTTCTTTTTCTCTAGATTAAAATACCCAAAAAGAAAGAA------------TAATGCT-TGTTA---ACA-C-----AAAAC---------------ACA--C------TTTGCCAGACT--------CGAATTTCG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------AT-A----TACATCG--AGCT--TAGC---CCTCAGTCTA---TTTTCCTG---A------C--TATGTGTTCATTAAAAA--TTA---------------TTTATGCA-T-----AT-ATATCCTTCTGACTCCA------ACC--AT----CCCA--ATAGGCAATCCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................TTCG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------.....................................................................................................................................................................................................................2416.006300003
.................................................................................................ACA--C------TTTGCCAGACT--------CGAAT...................................................................................................................................................................................................................................................................................2016.006000006
.........................................................................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCACGCC.....................2616.006600000
...................................................................................................................................................................................................AT-A----TACATCG--AGCT--TAGC---CCTCAGTCT..............................................................................................................................................................................2715.005100004
..............................................................................AAAC---------------ACA--C------TTTGCCAGACT--------CG......................................................................................................................................................................................................................................................................................2115.005000005
......................................................................................................................................................................................................A----TACATCG--AGCT--TAGC---CCTCA..................................................................................................................................................................................2115.005100004
...................................................................................................................................................................................................AT-A----TACATCG--AGCT--TAGC---CCTCA..................................................................................................................................................................................2314.004000004
...............................................................................AAC---------------ACA--C------TTTGCCAGACT--------CGAAT...................................................................................................................................................................................................................................................................................2314.004000004
.........................................................................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCA.........................2214.004400000
...................................................................................................................................................................................................AT-A----TACATCG--AGCT--TAGC---CCT....................................................................................................................................................................................2114.004100012
.................................................................................C---------------ACA--C------TTTGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................2513.003000003
..........................................................................................................................................AACT--------C------TTCCCG---CA-ACC--------AGCA-----------.....................................................................................................................................................................................................................2013.003300000
..................................................................................................CA--C------TTTGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................2313.003000003
..............................................................................................................TTGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................1913.003000003
..............................................................................................................TTGCCAGACT--------CGAATTTCG-AA............................................................................................................................................................................................................................................................................2113.003000003
......................................................................................................................................TCG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------.....................................................................................................................................................................................................................2313.003200001
....................................GAA------------TAATGCT-TGTTA---ACA-C-----A..........................................................................................................................................................................................................................................................................................................................................2013.003000003
...........................................................................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCA.........................2013.003300000
...........................................................................................................................................................................................................TACATCG--AGCT--TAGC---CCTCA..................................................................................................................................................................................2013.003100002
.............................................................................................................TTTGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................2013.003000003
.......................................................................C-----AAAAC---------------ACA--C------TTTGCCAGACT--------CGAAT...................................................................................................................................................................................................................................................................................2613.003000003
..................................................................................................CA--C------TTTGCCAGACT--------CGAAT...................................................................................................................................................................................................................................................................................1912.002000101
...............................................................................................................................................................................................................................................................................................................................................................A--ATAGGCAATCCCTCGCGCTCGCTCCG............................2712.002200000
..................................AAGAA------------TAATGCT-TGTTA---ACA-C-----A..........................................................................................................................................................................................................................................................................................................................................2212.002000002
.............................................................................................................................................................................................................................................................................................................................................................................CTCGCGCTCGCTCCGCCACGCC.....................2212.002100001
.................................AAAGAA------------TAATGCT-TGTTA---ACA-C-----A..........................................................................................................................................................................................................................................................................................................................................2312.002000002
........................................................................................................................................................................................................................................................................................................TTTATGCA-T-----AT-ATATCCTTCTGACTC...............................................................................2612.002000002
..............................................................................AAAC---------------ACA--C------TTTGCCAGACT--------CGAATTT.................................................................................................................................................................................................................................................................................2612.002000002
...................................................TAATGCT-TGTTA---ACA-C-----AAAAC---------------ACA--..................................................................................................................................................................................................................................................................................................................2412.002000002
..............................................................................................................................................................................................................................................................................................................................................................................TCGCGCTCGCTCCGCCACGCC.....................2112.002200000
......................................................................................................C------TTTGCCAGACT--------CGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2412.002000002
................................................................................AC---------------ACA--C------TTTGCCAGACT--------CG......................................................................................................................................................................................................................................................................................1912.002200000
...................................................................................................................................................................................................................................................CTG---A------C--TATGTGTTCATTAAAAA--..................................................................................................................................2212.002000002
..................................................................................................................................AATTTCG-AACT--------C------TTCCCG---CA-...............................................................................................................................................................................................................................................2012.002200000
....................................................................................................................................TTTCG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------.....................................................................................................................................................................................................................2512.002000002
..................................................................................................CA--C------TTTGCCAGACT--------CGAATT..................................................................................................................................................................................................................................................................................2012.002000002
..............................................................................................................TTGCCAGACT--------CGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2212.002000002
.........................................................................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCC..........................2112.002200000
...........................................................................................................................................................................................................TACATCG--AGCT--TAGC---CCTCAGTCT..............................................................................................................................................................................2412.002100001
......................................................................................................................................................................................................A----TACATCG--AGCT--TAGC---CCT....................................................................................................................................................................................1912.002000002
................................GAAAGAA------------TAATGCT-TGTTA---ACA-C-----A..........................................................................................................................................................................................................................................................................................................................................2412.002000002
................................................................................AC---------------ACA--C------TTTGCCAGACT--------CGAAT...................................................................................................................................................................................................................................................................................2212.002000002
..................................................................................................................................................................................................................................................................................................................................................................ATAGGCAATCCCTCGCGCTCGCTCCGCC..........................2812.002200000
.................................................................................C---------------ACA--C------TTTGCCAGACT--------CGAAT...................................................................................................................................................................................................................................................................................2112.002000002
.................................................................................................................................................................................................................................................................................................................T-----AT-ATATCCTTCTGACTCCA------ACC--..................................................................2312.002100001
..........................................................................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACG.......................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................ATAGGCAATCCCTCGCGCTCGCTCC.............................2511.001000001
...........................................................................................................................................................................................................TACATCG--AGCT--TAGC---CCTCAGTCTA---T.........................................................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGCCAACG.................2911.001100000
...............................AGAAAGAA------------TAATGCT-TGTTA---ACA-.................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................TG---A------C--TATGTGTTCATTAAAAA--..................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................................................................CAATCCCTCGCGCTCGCTCC.............................2011.001100000
................................................................................AC---------------ACA--C------TTTGCCAGACT--------CGAATTTC................................................................................................................................................................................................................................................................................2511.001000001
..........................................................................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGCCA....................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................GGCAATCCCTCGCGCTCGCTCC.............................2211.001100000
......................................................................................................................................................................................................................................................................................................................................................AT----CCCA--ATAGGCAATCCCTCGCGCT...................................2511.001100000
.................................................................................................ACA--C------TTTGCCAGACT--------CGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2711.001000001
...............................................................................................................TGCCAGACT--------CGAATTTCG-AA............................................................................................................................................................................................................................................................................2011.001000001
..............................................................................................................TTGCCAGACT--------CGAATTTCG-AACT--------..................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................................................AGGCAATCCCTCGCGCTCGCTCCGCCAC........................2811.001100000
...............................................................................................................................................................................................................................................................................................................................................................A--ATAGGCAATCCCTCGCGCT...................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................CTCGCGCTCGCTCCGCCACGCCAACG.................2611.001000001
.............................................................................AAAAC---------------ACA--C------TTTGCCAGACT--------CGAA....................................................................................................................................................................................................................................................................................2411.001000001
.....................................................................................................................................TTCG-AACT--------C------TTCCCG---CA-ACC--------A...................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................TAGGCAATCCCTCGCGCTCGCT...............................2211.001100000
.................................................................................................ACA--C------TTTGCCAGACT--------CGAATT..................................................................................................................................................................................................................................................................................2111.001000001
.....................................AA------------TAATGCT-TGTTA---ACA-C-----AAAAC---------------ACA--C------T..........................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................AAAC---------------ACA--C------TTTGCCAGACT--------CGAAT...................................................................................................................................................................................................................................................................................2411.001000001
......................................................................................................................................................................................................................................................................................................................................CTCCA------ACC--AT----CCCA--ATAGGCAATCCC..........................................2611.001000001
...............................................................................................................................................................CCCG---CA-ACC--------AGCA-----------AT-A----TACATCG--....................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................T-A----TACATCG--AGCT--TAGC---CCTC...................................................................................................................................................................................2111.001000001
.....................................................................A-C-----AAAAC---------------ACA--C------TTTGCCAGACT--------CGAATT..................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................GAATTTCG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------.....................................................................................................................................................................................................................2811.001000001
............................................................................................................................................................................................................................................................................................................................................................................CCTCGCGCTCGCTCCGCCACGCCAACG.................2711.001100000
......................................................................................................................................................................CA-ACC--------AGCA-----------AT-A----TACATCG--AGCT--TAGC---.......................................................................................................................................................................................2711.001100000
..................................................................................................CA--C------TTTGCCAGACT--------CGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2611.001000001
.......................................................................................................................................................................A-ACC--------AGCA-----------AT-A----TACATCG--AGC.................................................................................................................................................................................................2111.001000001
.................................................................................................................................................................CG---CA-ACC--------AGCA-----------AT-A----TACATCG--....................................................................................................................................................................................................2111.001000001
....................................................................................................................GACT--------CGAATTTCG-AACT--------C------TTCCCG---CA-...............................................................................................................................................................................................................................................2611.001100000
..............................................................................AAAC---------------ACA--C------TTTGCCAGACT--------CGAATT..................................................................................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................................................................TCG--AGCT--TAGC---CCTCAGTC...............................................................................................................................................................................1911.001100000
.............................................................................................................TTTGCCAGACT--------CGAATTTCG-AACT--------..................................................................................................................................................................................................................................................................2411.001000001
..........................................................................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCA.........................2111.001100000
..............................................................................................................................................................TCCCG---CA-ACC--------AGCA-----------AT-A----TACATCG--AGCT--T.............................................................................................................................................................................................2911.001000010
........................................................................................................................................G-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------.....................................................................................................................................................................................................................2111.001000001
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGC......................1911.001100000
...........................................................................................................................................................................................................................................................................................................ATGCA-T-----AT-ATATCCTTCTGACTCCA------ACC--..................................................................2811.001100000
...............................................................................................................TGCCAGACT--------CGAATTTCG-A.............................................................................................................................................................................................................................................................................1911.001000001
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCAACGCAAC.............2811.001100000
...............................................................................AAC---------------ACA--C------TTTGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................2711.001000001
...............................................................................................................................................................CCCG---CA-ACC--------AGCA-----------AT-A----TACATCG--AGCT--..............................................................................................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGCCAACGCAACCCCGTTGGGGGCT2611.001000001
...........................................................................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCACGCCA....................2511.001100000
...........................................................................................................................................................................................................TACATCG--AGCT--TAGC---CCTCAGTC...............................................................................................................................................................................2311.001000001
....................AATACCCAAAAAGAAAGAA------------TAATGC...............................................................................................................................................................................................................................................................................................................................................................2511.001000001
................................................................................................................................................................................................................................................................................................................................................................................GCGCTCGCTCCGCCACGCCAACGCA...............2511.001100000
..................................................................................................................................................................G---CA-ACC--------AGCA-----------AT-A----TACATCG--....................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGCC.....................2511.001100000
...............................................................................................................TGCCAGACT--------CGAATTTCG-AACT--------..................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCACGC......................2511.001100000
..............................................................................AAAC---------------ACA--C------TTTGCCAGAC.................................................................................................................................................................................................................................................................................................1811.001100000
...................................................................................................A--C------TTTGCCAGACT--------CGAATTTCG-AAC...........................................................................................................................................................................................................................................................................2511.001000001
..........................................................................................................................................AACT--------C------TTCCCG---CA-ACC--------AGCA-----------AT-A----.............................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................AATCCCTCGCGCTCGCTCCGCC..........................2211.001100000
.............................................................................................................................................................................................................CATCG--AGCT--TAGC---CCTCAGTCT..............................................................................................................................................................................2211.001000001
....................................................................................................................................................................................................T-A----TACATCG--AGCT--TAGC---CCTCA..................................................................................................................................................................................2211.001000001
...............................................................................................................................................................................................................................................................................................................................CTTCTGACTCCA------ACC--AT----CCC.........................................................2011.001000001
....................................................................................................................................TTTCG-AACT--------C------TTCCCG---CA-AC.............................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................G--AGCT--TAGC---CCTCAGTCTA---TTTTCCTG---...............................................................................................................................................................2711.001100000
...................................................................................................................................................................................................AT-A----TACATCG--AGCT--TAGC---CCTCAGT................................................................................................................................................................................2511.001000001
.............................................................................AAAAC---------------ACA--C------TTTGCCAGACT--------CGAATT..................................................................................................................................................................................................................................................................................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................T----CCCA--ATAGGCAATCCCTCGCGCT...................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................CCCA--ATAGGCAATCCCTCGCGCT...................................2311.001100000
.............................................................................................................................................................................................................................................................................................................................................................................CTCGCGCTCGCTCCGCCACGCCAAC..................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................A--ATAGGCAATCCCTCGCGC....................................1911.001000001
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCA....................2111.001100000
...............................................................................................................TGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................1811.001000001
....................................................................................................................................................................................................................................................................................................................................................................AGGCAATCCCTCGCGCTCGCTCC.............................2311.001000001
..................................................................................................CA--C------TTTGCCAGACT--------CGAATTT.................................................................................................................................................................................................................................................................................2111.001000001
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCAACGCA...............2611.001100000
...........................................................................................................................................ACT--------C------TTCCCG---CA-ACC--------AGCA-----------.....................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................AGGCAATCCCTCGCGCTCGCTCCGCCA.........................2711.001100000
...............................................................................................................................................................................................................TCG--AGCT--TAGC---CCTCAGTCT..............................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCACGC......................2311.001100000
..................................................................................................CA--C------TTTGCCAGACT--------CGAATTTCG-AA............................................................................................................................................................................................................................................................................2511.001000001
.......................................................................................................................................CG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------AT-A----.............................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................ATCCCTCGCGCTCGCTCCGCCACGCCA....................2711.001100000
................................................................................................................................................................................................................CG--AGCT--TAGC---CCTCAGTCTA---TTTTCCT...................................................................................................................................................................2711.001000001
.....................................................................................................................................................................................GCA-----------AT-A----TACATCG--AGCT--TAGC---CCTCA..................................................................................................................................................................................2611.001000001
......................................................................................................C------TTTGCCAGACT--------CGAATTTC................................................................................................................................................................................................................................................................................2011.001000001
...............................................................................AAC---------------ACA--C------TTTGCCAGACT--------C.......................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCCAAC..................2311.001000001
.................................................................................................................................GAATTTCG-AACT--------C------TTCCCG---CA-...............................................................................................................................................................................................................................................2111.001100000
..................................................................................................CA--C------TTTGCCAGACT--------CGAATTTCG-A.............................................................................................................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................................................................................................CCTCGCGCTCGCTCCGCCAC........................2011.001100000
....................................................................................................................................................................................AGCA-----------AT-A----TACATCG--AGCT--TAGC---CC.....................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................................................ATCCTTCTGACTCCA------ACC--AT----CCC.........................................................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCC..........................1911.001100000
.............................................................................AAAAC---------------ACA--C------TTTGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................2911.001100000
................................................................................................................................................................................................................CG--AGCT--TAGC---CCTCAGTCT..............................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................................................................................................................................TATCCTTCTGACTCCA------ACC--..................................................................1911.001100000
.................................................................................................ACA--C------TTTGCCAGACT--------CGAATTTCG-..............................................................................................................................................................................................................................................................................2411.001000001
.....................................................................................................................................TTCG-AACT--------C------TTCCCG---CA-ACC--------AGC.................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................CG-AACT--------C------TTCCCG---CA-ACC--------AGC.................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................TCCCTCGCGCTCGCTCCGCCACGC......................2411.001100000
...............................................................................................................................................................................................................TCG--AGCT--TAGC---CCTCAGTCTA---TT........................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGCTCCGCCACGCC.....................2011.001100000
...................................................................................................................................................................................................AT-A----TACATCG--AGCT--TAGC---CCTCAGTC...............................................................................................................................................................................2611.001100000
....................................GAA------------TAATGCT-TGTTA---ACA-C-----AAAAC---------------A......................................................................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................CCCTCGCGCTCGCTCCGCCACGCCAAC..................2711.001100000
...................................................................................................................................................................................................AT-A----TACATCG--AGCT--TAGC---CCTCAGTCTA---..........................................................................................................................................................................2811.001000001
droBip1
T------------AGATTAAAATACCCAAAAAGAAAGAA------------TAATGCT-TGTTA---ACA-C-----AAAACA-------------CTTA----------TTGCCAGATT--------CGAGTTTTG-AACT--------C------TTCCCG---CA-ACC--------AGCA-----------AT-A----TACATCG--AGCT--TAGC---CCTCAGTCTA---TTTTCCTG---A------C--TATGTGTTCATTCAAAAATTTA---------------TTTATGCA-T-----AT-ATATCCTTCTGACTTCA------AAACCAT----CCCA--ATAGGCACACCCTCGCGCTCGCTCCGCCACGCCAACGCAACCCCGTTGGGGGCTSizeHit CountTotal NormTotal
No Reads
droKik1
CTC---TTATTACAGATTAAGATACCCAAAAAGAAAGAA------------TAAAGCTTTATTA---ATA-C-----AAAAA-------------ATCTA--A------TTTGC---------------CAATTTCG-AACGC-----CGCCTCCGCCTCCCT---CA-GCC--------AGCACCAA-A--CA-AT-A----TA---------CA-----------------------TATCCTG---AA-TCT-CTATATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCATCGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droFic1
TCT----AATTCCAGATTAAAATACCCAAAAAGAAAGAT---G------AATAAAGCC-TATTA---ATA-C-----A-----------------ATTTA--C------TTTGCAA--------------TATTTCG-AACG--------C------CTCCCT---CG-ACA--------AGCACCAA-ATATA-AT-A----TATATCA--TACTC-TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droEle1
T----------ACAGATTAAAATACCCAAAAAGAAAGAA---GA---AGCTTAAAGCC-TATTA---ATA---------TACA------------ATTTA--T------TTTGCAA--------------AAATTCG-AACG--------C------CTCCTC---CA-ACAAA-----A-GCACCAA-ATACA-ATTACAATTATATCATATACT--TAGC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGAGCTCGCTCCGCCACGCCAACACAATCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droRho1
T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCT---CA-ACA--------AGCACCAA-ATACA-ATTACAATTATATCA--TACT--TAGC---CCTCAGTCTACTACTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATA-A--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACGCCAACGCAAACACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droBia1
TT------ATTCCAGATTAAAATACCCAAAAAGAAAGAATCCG------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAGTTTCG-AACG--------C------CTCCCT---CA-GCA--------AGCACCAA-ATACA-ATTACAATTAT-TCA--TACT--TAGC---TCTCAGTCTA---CTTTCCTG---ACCTGA-CTCTATGTGTTCAATCAAAA-------------------------GCCATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCTGCCACTCCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droTak1
TT------ATTCCAGATTAAAATACCCAAAAAGAAAGAATCCG------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--C------TTTGC---------------AAATTTCG-AACG--------C------CTCCCT---CA-ACAAA-----A-GCACCAA-ATACA-ATTACAACTATATCA--TACT--TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCCACTCCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
droEug1
ATT---TTATTCCAGATTAAAATACCGAAAAAGAAAGAA---GA---AGAATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAATTTCAAAACG--------C------CTCCCT---CA-ACA--------AACACCAA-ATACA-ATTATATTTATATTA--CACT--TAAC---CCTTGGTCTA---CTTTCCTG---A------CTCTATGTGTTCATTCAAA--------------------------GCAATATA--AT-ATATCGTTCTGACTACA------CA---------ACTT--ATAGGTAAACCCGCGCGCTCGCTCCGCTACTCCAACGCAAACACGCTGGGGCCTSizeHit CountTotal NormTotal
No Reads
dm3
T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----AATACA------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCTCTTCAAGCA--------AGCACCAA-ATACAAATTACAATTATATCA--TACT--TAGCCCACCTCAGTCTT---CTTTCCTG---A------CCCTATGTGTTCACTCCAA--------------------------CCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGATGGGGTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................G---A------CCCTATGTGTTCACTCC.......................................................................................................................................19117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000001600000200000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................A--AT-ATATCGTTCTGACTACA------.......................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G---A------CCCTATGTGTTCACTCCAA--------------------------CC.........................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000200000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AT-ATATCGTTCTGACTACA------AA---------ACT.........................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................AT-ATATCGTTCTGACTACA------.......................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TG---A------CCCTATGTGTTCACTCC.......................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTCG-AACG--------C------CTCCCTCTTCAAGCA--------....................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ACG--------C------CTCCCTCTTCAAGCA--------....................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TCTGACTACA------AA---------ACTT--ATA...................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGCGACGCCAACGCAACC............1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................T--ATAGGTAAATCCGCGCGCT...................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCGACGCCAACGCAACCACGAT.......2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G---A------CCCTATGTGTTCACTCCAA--------------------------CCA........................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................ATGTGTTCACTCCAA--------------------------CCA........................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGATCCGCGACGCCA....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................T-ATATCGTTCTGACTACA------.......................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCCCTCTTCAAGCA--------AGCACC..............................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCCAAAAAGAAAGAA---G------AAT....................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCGACGCCAACGCAACCA...........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCA--------AGCACCAA-ATACAAATTA.................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TACA--AT-ATATCGTTCTGACTACA------AA---------............................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AAGCA--------AGCACCAA-ATACAAATTACA...............................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CGATCCGCGACGCCAACGCAACCA...........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCGACGCCAACGCAACCAC..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATGTGTTCACTCCAA--------------------------CC.........................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G---A------CCCTATGTGTTCACTC........................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GC---------------AAATTTCG-AACG--------C------CTCCC......................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAATACCCAAAAAGAAAGAA---..............................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CG--------C------CTCCCTCTTCAAGCA--------AGCACC..............................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CGATCCGCGACGCCAACGCA...............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................AAATACCCAAAAAGAAAGAA---G------A......................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CCTG---A------CCCTATGTGTTCACTCC.......................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATGTGTTCACTCCAA--------------------------CCAATACA--.................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TAGCCCACCTCAGTCTT---CTTTCC....................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................G-AACG--------C------CTCCCTCTTCAAGCA--------....................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAAAGAAAGAA---G------AATAAAGCT-T............................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AT-ATATCGTTCTGACTACA------A......................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCCCACCTCAGTCTT---CT........................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTCG-AACG--------C------CTCCCTCTTCAAGCA--------A...................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TCAGTCTT---CTTTCCTG---A------CCCT....................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGAAAGAA---G------AATAAAGCT-TATTA---.....................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................GATCCGCGACGCCAACGC................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................TCG-AACG--------C------CTCCCTCTTCA................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGAAAGAA---G------AATAAAGCT-.............................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AA---------ACTT--ATAGGTAAATCCGCGCGCT...................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCA--TACT--TAGCCCACCTCA..................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAATCCGCGCGCTCGATCC.............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................G-AACG--------C------CTCCCTCTTCAAGC.............................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCCCACCTCAGTCTT---CTTTCCT...................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................T--ATAGGTAAATCCGCGCGCTCGATCC.............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAAAGAAAGAA---G------AATAAAGCT-.............................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CG--------C------CTCCCTCTTCAAGCA--------....................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................AATTACAATTATATCA--TAC.................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................T-ATATCGTTCTGACTACA------AA---------............................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CG--------C------CTCCCTCTTCAAGCA--------A...................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AACG--------C------CTCCCTCTTCAAGCA--------....................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A--TACT--TAGCCCACCTCAGTCTT---CT........................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ATACA--AT-ATATCGTTCTGACTATC------.......................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCTTCAAGCA--------AGCACCAA-ATA........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CCGCGCGCTCGATCCGCGACGCCAAC..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AA---------ACTT--ATAGGTAAATCCGCGCGCTC..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................AATTTCG-AACG--------C------CTCCCT.....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TACAAATTACAATTATATCA--TACT--..............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CTCGATCCGCGACGCCAACGCA...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................A--TACT--TAGCCCACCTCAGT................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GGTAAATCCGCGCGCTCGATCC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AATACA--AT-ATATCGTTCTGACTACA------A......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TG---A------CCCTATGTGTTCACT.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCCCACCTCAGTCTT---CTT.......................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AATCCGCGCGCTCGATCCGCGA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................A--------------------------CCAATACA--AT-ATATCGTTCTGACTA...............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATGTGTTCACTCCAA--------------------------CCAAT......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCA--------AGCACCAA-ATACAAA....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TGTGTTCACTCCAA--------------------------CCAATACA--.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TCAGTCTT---CTTTCCTG---A------C.......................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTATATCA--TACT--TAGCCCACC.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCTTCAAGCA--------AGCACCAA-AT.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CG--------C------CTCCCTCTTCAAGCA--------AGCA................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TG---A------CCCTATGTGTTCACTCCAA--------------------------CCAATA.....................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAATCCGCGCGCTCGATC..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................ATTACAATTATATCA--TACT--TAGCCCACCTC...................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGCACCAA-ATACAAATTACAATT............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CTG---A------CCCTATGTGTTCACTCCAA--------------------------CC.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AAGCA--------AGCACCAA-ATACA......................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................A--------------------------CCAATACA--AT-ATATCGTTCTGACTACA------AT---------C...........................................................3111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TACA------------ATTTA--T------TTTGC---------------AAA....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TGC---------------AAATTTCG-AACG--------C------CT.........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCGATCCGCGACGCCAAC..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................A--------------------------CCAATACA--AT-ATATCGTTCTGACTATC------.......................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TACCCAAAAAGAAAGAA---G------AAT....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................TAGGTAAATCCGCGCGCTCGAT...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CACCTCAGTCTT---CTTTCCT...................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CGCGCGCTCGATCCGCGAC........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----AATACA------------GTTTA--T------TTTGC---------------AAATTTCA-AACG--------C------CT-----------------------------------------------------------TAGCCATCCTTAGTCTT---CTTTCCTG---A------CCCCATGTGTTCACTCCAA--------------------------CCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................A--AT-ATATCGTTCTGACTACA------AA---------A...........................................................2311.00101000000000000000
....................................................................................................................................................................................................................................................................................................................A--AT-ATATCGTTCTGACTACA------.......................................................................2011.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GACGCCAACGCAACCACGCTGGGGTCT2711.00100010000000000000
................................................................................................................................................................................................................................................................................................................ATACA--AT-ATATCGTTCTGACTACA------.......................................................................2411.00100000000000001000
droSec2
T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----AATACA------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCTCTCCA-GCAA------A-GCACCAA-ATACA-ATTACAATTATATCA--TACT--TAGCCATCCTTAATCTT---CTTTCCTG---AC-TGA-CCCTATGTGTTCACTCCAA--------------------------CCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAATCCGCGCGCTCGATCCGCGACGCCAACGCAACCACGCTGGGGTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................CCCTCTCCA-GCAA------A-GCACCA.............................................................................................................................................................................................................................2011.0011000
..................................................................................................................................AATTTCG-AACG--------C------CTCCCTCTCCA-...............................................................................................................................................................................................................................................2311.0011000
......................................................................................................................................TCG-AACG--------C------CTCCCTCTCCA-GCAA------A-GCAC...............................................................................................................................................................................................................................2811.0011000
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGATCCGCGACGCCAACGCC...............2611.0011000
..................................................................................................................................................................................................................................................CCTG---AC-TGA-CCCTATGTGTTCACTCCA......................................................................................................................................2711.0011000
.......................................................................................................................................................................................................................T--TAGCCATCCTTAATCTT---CTTTCCTG---AC-T...........................................................................................................................................................2911.0011000
...................AAATACCCAAAAAGAAAGAA---G------AAT....................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.......................................................................................................................................................................................................................T--TAGCCATCCTTAATCTT---CTTTCCT...................................................................................................................................................................2511.0011000
............................................................................................................................................................................................................................................................................................................................ATCGTTCTGACTACA------AA---------ACTT--AT....................................................2311.0011000
..............................................................................................................................................................................................................................................................................................................................................................................GCGCGCTCGATCCGCGACGCCAACGCA...............2711.0011000
...............................................................................................................................................................................................................................................................................................................AATACA--AT-ATATCGTTCTGACT................................................................................2211.0010100
...............................................................................................................................................................................................................................................TTTCCTG---AC-TGA-CCCTATGTG...............................................................................................................................................2111.0011000
droYak3
T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCCCT--TCA-AC---------AGCACCGAAATACA-ATTACAATTATATCA--TACT--TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCACTCAAT--------------------------GCAATACACTAT-ATATCGTTCTGACTACA------CA---------ACTT--ATAGGTAAACCCGCGCGCTCGATCCGCCACGCCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
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..................................................................................................................................................................................................................................................................................................................................CTGACTACA------CA---------ACTT--ATAG..................................................1911.00101000000000
..................................................................................................................................................................................................................................................................................T--------------------------GCAATACACTAT-ATATCGTTCTGACC................................................................................2711.00110000000000
.....................................................................................................................................................................................................................................................................................................................CTAT-ATATCGTTCTGACT................................................................................1811.00110000000000
............................................................................................................................................................................................................................................................................................................................................................ACTT--ATAGGTAAACCCGCGCGCTCGATC..............................2811.00110000000000
...............................................................................................................TGC---------------AAATTTCG-AACG--------C------CTCC.......................................................................................................................................................................................................................................................2011.00101000000000
..................................................................................................TA--T------TTTGC---------------AAATTTCG-AACG--------C------CTCC.......................................................................................................................................................................................................................................................2511.00110000000000
....................................................................................................................................TTTCG-AACG--------C------CTCCCT--TCA-AC---------AGCACCG.............................................................................................................................................................................................................................2811.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCGCTCGATCCGCCACGCCA....................2111.00101000000000
..............................AAGAAAGAA---G------AATAAAGCT-.............................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.............................................................................................................................................G--------C------CTCCCT--TCA-AC---------AGCACCG.............................................................................................................................................................................................................................2011.00101000000000
............................AAAAGAAAGAA---G------AATAAAGCT-T............................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
T----------CCAGATTAAAATACCCAAAAAGAAAGAA---G------AATAAAGCT-TATTA---ATA-C-----A-----------------ATTTA--T------TTTGC---------------AAAT-TCG-AACG--------C------CTCCCT--TCA-AC---------AGCACCAAAATACA-ACTACAATTATATCA--TACT--TAGC---CCTCAGTCTA---CTTTCCTG---A------CTCTATGTGTTCACTCAAT--------------------------GCAATACA--AT-ATATCGTTCTGACTACA------AA---------ACTT--ATAGGTAAACCCCCGCGCTCGATCCGCCACACCAACGCAACCACGCTGGGGCCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................AATACCCAAAAAGAAAGAA---G------AATAAAGCT-.............................................................................................................................................................................................................................................................................................................................................................2912.0020000200
........................................................................................................................................G-AACG--------C------CTCCCT--TCA-AC---------AGCACCA.............................................................................................................................................................................................................................2412.0022000000
..............................................................................................................................................................................................................................................................................................................................................................................CCGCGCTCGATCCGCCACACCA....................2212.0022000000
.................................................................................................TTA--T------TTTGC---------------AAAT-TCG-AACG--------C------CT.........................................................................................................................................................................................................................................................2311.0011000000
................................................................................................................................................................................................................................................................................AAT--------------------------GCAATACA--AT-ATATCGTTCTGACTA...............................................................................2811.0010000100
............................AAAAGAAAGAA---G------AATAAAGCT-TATT.........................................................................................................................................................................................................................................................................................................................................................2511.0010000010
........................................................................................................................................................................................................................................................................................................................................................................AAACCCCCGCGCTCGATCCG............................2011.0011000000
...................................................................................................................................................................................................................................................CTG---A------CTCTATGTGTTCACTC........................................................................................................................................2011.0011000000
........................................................................................................................................................................................................................................CTA---CTTTCCTG---A------CTCTATGTGTT.............................................................................................................................................2311.0010000010
.................................................................................................................................................................................................................................................TCCTG---A------CTCTATGTGTTCACTCA.......................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................TTATATCA--TACT--TAGC---CCTCAGTCTA---..........................................................................................................................................................................2611.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................AACCCCCGCGCTCGATCCGCCA.........................2211.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACGCAACCACGCTGGGGC..1811.0011000000
.....................................................................................................................................................................................GCACCAAAATACA-ACTACAATTATA.........................................................................................................................................................................................................2511.0010000010
.............................................................................................................................................................................................................................................................................................................................TCGTTCTGACTACA------AA---------ACT.........................................................1911.0011000000
.................................................................................................................................................................................................................................................................................................................................................AA---------ACTT--ATAGGTAAACCCC.........................................1911.0011000000
....................................GAA---G------AATAAAGCT-TATTA---ATA-C-----A-----------------.........................................................................................................................................................................................................................................................................................................................2311.0010000010
.....................................................................................................................................................................................................................................................G---A------CTCTATGTGTTCACTCA.......................................................................................................................................1911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................CCCGCGCTCGATCCGCCACACC.....................2211.0011000000
..........................................................................................................................................................................................................................................A---CTTTCCTG---A------CTCTATGTGTTCACT.........................................................................................................................................2511.0011000000
..........................................................................................................................................................................................................................................................................................................................ATATCGTTCTGACTACA------AA---------AC..........................................................2111.0011000000
......................................................................................................................................................................CA-AC---------AGCACCAAAATACA-ACT..................................................................................................................................................................................................................2111.0010000010
.......................................................................................................................................................................................................................................................................................................................AT-ATATCGTTCTGACTACA------AA---------ACT.........................................................2411.0011000000
.......................................................................................................................................................................................................................................................................TGTTCACTCAAT--------------------------GCAATACA--AT-A.............................................................................................2311.0011000000

Generated: 05/18/2015 at 12:24 AM