ID:

dps_1295

 Coordinate:

3:18206199-18206371 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.6

Flybase annnotation

exon [dpse_GLEANR_16372:5]; CDS [Dpse\GA25110-cds]; CDS [Dpse\GA25110-cds]; exon [dpse_GLEANR_16372:4]; intron [Dpse\GA25110-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCAGCAGCAGCAACAGCAACAACAACAGCAGCAGCAGCAGCAGCAAAAGGTGGCCGCCACCCTGGCCCTACAGCATCATCAACATCATCAGCAACAGCAACACCAGAGCCTGCCCGCCCTGCAGCCCATGCCCGCCCTGAGCTCCATCTTCGAGCCTTCGACGGAGCAGCAGCAGCAGCAGCAACAGCAACAGCTGCAGATGCAACAACTGATCACTGCCAGCAACAACCATAATGCCTCGAATAATCTAAGTAGCATCAACAGCACTGCCA
***************************************************************************************************************************......((((((...(((((((.......))))..))).))).))).******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902012
CNS imaginal disc
 GSM343916
embryo
 M059
embryo
..................................GCAGCAGCAGCAAAAGGTGGC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1
........................................................................................................................................................GAGCCTTCGACGGAGCAG....................................................................................................... 18 0 1 1.00 1 0 0 1 0
...........................................................................................................................AGCCCATGCCCGCCCTGAGCT................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
....................................................................CTACAGCATCATCAACATCA......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................AGATGCAACAACTGATCACTGCCA................................................... 24 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................................................................AAGTAGCATCAACAGCACTGC.. 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................TTCGAGCCTTCGACGGAGCAG....................................................................................................... 21 0 1 1.00 1 1 0 0 0
.................................AGCAGCAGCAGCAAAAGGTGG........................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................TTCGAGCCTTCGACGGAG.......................................................................................................... 18 0 1 1.00 1 1 0 0 0
............................................................................................................................................................CTTCGACGGAGCAGCAGCAGCAGCA............................................................................................ 25 0 1 1.00 1 0 1 0 0
............................................................................................................................................................CTTCGACGGAGCAGCAGCAGC................................................................................................ 21 0 1 1.00 1 0 1 0 0
..................................................................................................................................................................................................................TGATCACTGCCAGCAACAACCATAAT..................................... 26 0 1 1.00 1 1 0 0 0
...................................................................ACTACAGCGTCATCAACATCCTC....................................................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0
.........................................................................GCATCATCAACATCATCAGCAC.................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0
...............................................................................................................................CGTGACCGCCCTGAGCTCC............................................................................................................................... 19 2 4 0.25 1 0 0 1 0
....................................................................................ATCACCAGCAACAGCAACACCA....................................................................................................................................................................... 22 1 4 0.25 1 1 0 0 0
................GCAACAACAACAGCAGCAGC............................................................................................................................................................................................................................................. 20 0 20 0.15 3 2 0 1 0
.......................CAACAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................... 19 0 20 0.15 3 3 0 0 0
....................................................................................................................GCCCTGCAGGCCATGTCCGCT........................................................................................................................................ 21 3 8 0.13 1 1 0 0 0
....................CAACAACAGCAGCAGCAGCAGCAGC.................................................................................................................................................................................................................................... 25 0 20 0.10 2 1 1 0 0
.....................AACAACAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0
................................................................................................................................................................................CAGCAGCAACAGCAACAGCT............................................................................. 20 0 13 0.08 1 1 0 0 0
................GCAACAACAACAGCAGCAGCAGCAG........................................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0
............AACAGCAACAACAACAGCAGCAGC............................................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
...............AGCAAAAACAACAGCAGCAGGA............................................................................................................................................................................................................................................ 22 2 20 0.05 1 0 0 1 0
...........................AGCAGCAGCAGCAGCAGCA................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0
............ATCAGCAACAACAACAGCAGCAGC............................................................................................................................................................................................................................................. 24 1 20 0.05 1 0 0 0 1
......AGCAGCAACAGCGACAACA........................................................................................................................................................................................................................................................ 19 1 20 0.05 1 1 0 0 0
..............CAGCAACAACAACAGCAGCAG.............................................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
.........AGCAACAGCAACAACAACAGCA.................................................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
.................CAACAACAACAGCAGCAGCAGC.......................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1
...................ACAACAACAGCAGCAGCAGCAG........................................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0
.................CAACAACAACAGCAGCAGCAG........................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................CGGAGCAGCAGCAGCAGC............................................................................................. 18 0 20 0.05 1 0 0 0 1
.......................................................................................................................................................................CAGCAGCAGCAGCAGCAACAG..................................................................................... 21 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

TCGTCGTCGTCGTTGTCGTTGTTGTTGTCGTCGTCGTCGTCGTCGTTTTCCACCGGCGGTGGGACCGGGATGTCGTAGTAGTTGTAGTAGTCGTTGTCGTTGTGGTCTCGGACGGGCGGGACGTCGGGTACGGGCGGGACTCGAGGTAGAAGCTCGGAAGCTGCCTCGTCGTCGTCGTCGTCGTTGTCGTTGTCGACGTCTACGTTGTTGACTAGTGACGGTCGTTGTTGGTATTACGGAGCTTATTAGATTCATCGTAGTTGTCGTGACGGT
*******************************************************************************************************......((((((...(((((((.......))))..))).))).))).*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM444067
head
 V112
male body		 GSM343916
embryo
...............................................................................AGTTGTAGTAGTCGTTGTC............................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
...............................................................................................................................GTACGGGCGGGACTCGAGGTA............................................................................................................................. 21 0 1 1.00 1 1 0 0 0
........................................................CGGTGGCACCGGGATGTCATATT.................................................................................................................................................................................................. 23 3 1 1.00 1 0 1 0 0
...............................................................................................................................................AGGTAGAAGCTCGGAAGCTGC............................................................................................................. 21 0 1 1.00 1 1 0 0 0
......................................................................................................TGGTCTCGGACGGGCGGGAC....................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
........................................................CGGTGGAACCGGGATGTCATAAT.................................................................................................................................................................................................. 23 3 1 1.00 1 0 1 0 0
.............................................................TGACCGGGATGTCGTAGTAGTT.............................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0
..............................................................................................................................GGTACGGGCGGGACTCGAG................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
........................................................CGGTGGCAACGGGATGTCGTAAT.................................................................................................................................................................................................. 23 3 1 1.00 1 0 1 0 0
......................................................................................................................................CGGGACTCGAGGTAGAAGCTC...................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.........................................................GGTGGAACCGGGATGTCGTATC.................................................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0
.........................................................GGTGGCACCGGGATGACGTAAT.................................................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0
...................................................................................................................................................................................................................................................TACTAGATTCATCAGAGTTG.......... 20 3 3 0.33 1 0 1 0 0
..............................................................................................................GTCGGGCGGGACGTCGGGACC.............................................................................................................................................. 21 3 5 0.20 1 1 0 0 0
.......................................................................................................................................................................................................................TGACCGTCGTTGTTGGTCTTA..................................... 21 2 7 0.14 1 0 0 0 1
.............................................................................................................GGACAGGCGGGGCGTTGGGTA............................................................................................................................................... 21 3 7 0.14 1 0 0 1 0
.............................................................................................................GGACGGGCGAGGCGTTGGGTA............................................................................................................................................... 21 3 10 0.10 1 1 0 0 0
.....................................................CGTCGGTGGGACCGGGGTT......................................................................................................................................................................................................... 19 3 20 0.10 2 2 0 0 0
...............................................................................................................ACGGGCGAGTCGTCGGGT................................................................................................................................................ 18 2 12 0.08 1 1 0 0 0
..............................................................................................................GACGGGCGAGGCGTTGGGTA............................................................................................................................................... 20 3 15 0.07 1 0 0 1 0
..............................................................................AAGTTGTAGCAGTCGTTGT................................................................................................................................................................................ 19 2 17 0.06 1 1 0 0 0
.............................................................................AAAGTTGTAGCAGTCGTTGT................................................................................................................................................................................ 20 3 20 0.05 1 1 0 0 0
.........................................................................CGAAGTAGTTGTAGGAGTCA.................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0
..................TTGTTGTTGTCGTCGTCGTC........................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
............................................................................................................CGGACGGGCGGGTCGGCG................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:18206149-18206421 + dps_1295 AGCAGCAGCAGCAACAGCAACAA---CAACAGCAGCAGCAGCAGCAGC---AA---------A--A-G------------------------------------------------------------------------------------GTGGCCGCCACCCTGGCCCTACAGCATCA-------TCAA------C------ATCATC----AGC-----------AACAGCAA------------------------------------CAC-----------------------------------------C------------------------------------------------------------------------------------------------------AGAGCCTGCCCGCCCTGCAGCCCATGCCCGC---CCTGAGCTCCATCTTCGAGCCTTCGACGGAGCAGCAGCAGCAGC----AGCAACAGCAACAGCTGCAGATGCAACAAC------------------------TG---ATCA----------------------------------------------------------------CTGCCAG----------------CAACAACCATAATGCC------------------TC--------------------------GAATAAT----CT----------------AA---GTAGCATCAAC------------A---------------------------------------------------------GCAC-------------------------------------TGCCA
droPer2 scaffold_34:149953-150225 + dpe_1497 AGCAGCAGCAGCAACAGCAACAA---CAACAGCAGCAGCAGCAGCAGC---AA---------A--A-G------------------------------------------------------------------------------------GTGGCCGCCACCCTGGCCCTACAGCATCA-------TCAA------C------ATCATC----AGC-----------AACAGCAA------------------------------------CAC-----------------------------------------C------------------------------------------------------------------------------------------------------AGAGCCTGCCCGCCCTGCAGCCCATGCCCGC---CCTGAGCTCCATCTTCGAGCCTTCGACGGAGCAGCAGCAGCAGC----AGCAACAGCAACAGCTGCAGATGCAACAAC------------------------TG---ATCA----------------------------------------------------------------CTGCCAG----------------CAACAACCATAATGCC------------------TC--------------------------GAATAAT----CT----------------AA---GTAGCATCAAC------------A---------------------------------------------------------GCAC-------------------------------------TGCCA
droWil2 scf2_1100000008636:890-1145 + GGCAGCAACAACAACAGCAACAA---CAACTGCAGCAGCAACAACAGC---AA---------C--A-G----------------------------CAGCAACAA------------------T------G-----------------------------------------GC-------------A---GCA------ACAA---CAAC--AG-------------C------------AACAA--CA---ACTGCA-GCAGCAA------CAATT-G------------C-AGCAAC---------------------------------------AACAGCAAC---AGC---------------------------------AGCAACAATGGCAGCAAC---AA---------------------------------------------------------------------------------C---AACAGC-AAC---------------------------AACAACTGCAGCAGCAACAACAACA-----------------GCA-------GCAACAACAACTGCAG---------------CAGC------AACAATTGCAG----------------CAACAACAACAACAGC------------------AG---------------------------------------------------C-AACA---ACAACAGCAGC------------A---------------------------------------------------------GCAAC-------------------------------------AACA
droVir3 scaffold_12758:174044-174292 + TGCAGCAGCAGCAGCAGCAACAA---CAACAGGAGCAGCAGCAGCAGC---AA---------A--C-A----------------------CC---GCAGCAGC---------------------------------------------------------------------------------AGCA---GC---------AAGAACAGC--AA-------------CAGCAGCA-----------------GCA-------GCAA------CAACA-T------------C-AGCAAC---------------------------------------AACTCA---------------ATCAGC---AGCAGCAGCAGCAACAACAACAGCAA------------------------------------------------------------------------------------------------C---AACAA-C---------------T---------------------------------CA-----------A------CCAGCA-----------------------------------------------------------------------------GCAGCAACAACAACTGCAGCAGCAGCAGCAGCTGGCTTTGCCGCACAGTCATCATGCCCTGATGCAG----------------------CA---GTCGCATCAGC------------A---------------------------------------------------------GCA--------------------------------------GGCCA
droMoj3 scaffold_6496:19026985-19027234 + AGCAGCAGCAGCAGCAGCAACAG---CAGCATCAGCAGCAGCAGCAGC---AA---------C--A-A----------------------------CAGCAGCAG------------------C------A------------------------------------------------------------A------CAGCAACAGCAGC--AG-------------CAACAACA-----------------GCAGCA----GCAGCAA---CAGCA-G------------C-AGCAGC---------------------------------------AGCAGCAAC---AGC---------------------------------AGCAACAGCAGCAACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AACAGCAGCAGCAGCAACAACAGCA-----------------GCA-------GCAACAACATC---AG---------------CAGC------AGCAGCAACAT----------------CATCATCAGCAGCAGC-------------------------------------------------------------------------AGCA---ACATCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------AGCA
droGri2 scaffold_15203:5083874-5084127 + AGCAGCAACAGCAACAGCAACAG---CAGCAGCAGCAGCAGCAGCAGC---AT---------G--A-G----------------------CA---ACAACAAC---GG---------------C------A------------------------------------------------------------ACA------GCAACAGCAGC--AG-------------CAACAACA-----------------GCAACA----ACAAC--------------------------AACAAC---------------------------------------AAATGCATCA---CC------ATCACC---------------------ATCATCAGCAAC---A------------------------------------------------------------------------------------ACAAC---AAC----AGC------------------------------------AAC------------A---------------------------GCAGCAG---------CAG------------CAAC------AACAACAGCAA----------------CAACAGCAGCAGCAGC------------------A-------------------------------------------------------ACAACAACAGCAGCAGC------------A------------------------------------------------------------ACAGCAATCGTCTCGCTCGGCAGCTAGTCCGTTGTCGCCGCCA
droAna3 scaffold_13117:4508303-4508570 - AGCAGCAGCAACACCAGCAACAA---CAACAGCAGCAACATCAGCTGC---AA---------C--A-G----------------------------CACCAACAA------------------C------A-----------------------------------------GT-------------T--------------------------G-------------CAACACCAACAGCAGCAA--CA---ACAG------------------------------------------------------------------------------------------CAAC---AGCACCTGCATCAGCAACAACTGCAGCCACATCAGCAGCAAATGCAACACC---AT---------------------------------------------------------------------------------C---AGCA-------------------------------------------------------------------------------------GCAACAA---------CAGCA-------GCA--GCAGCAGCAACAGCATCAGCAACTGTTGCACGAATC-GCAGCAGCAGCAAC------------AGCAGCAG---------------------------C---------AGCAGCAATACCATC-CGCA------------TCACCTGC------A---------------------------------------------------------TCCGC-ACA----------------GT--------------CTGCC
droBip1 scf7180000396569:757030-757306 + AGCAGCAGCAGCAACTG-ATCAACAATCTCAGCAACGGCAACAATGTT---GC---------AAATGGCACCTTGCCACCGCCAACGCAATTGTTGCAGCATC---AT---------------TTGCAGCATCTGGC-CCATGTGAACGTGAA---------------------TGC----GGCA---GCTGC------------AGTGGTGG-----CTGTGGCAGCCA--------------------------------------------ACAAC--------------CTGCAACAGCAACAGCAGCAACA----------------------------------------------TGCG---------------------AAC----------------------------------------------------------------------------------------------------------------------AGCAACAGCAAT------------------------------GGTGGCA------------------------------------------------------------AC------AACAGTAGCAA----------------CAATAACAACAACACC------------------ATA---------------------CTCAATCACAACAATCT----------------CA---ATATCATAATC------------A---------------------------------------------------------ATA---------------------------------------ACCA
droKik1 scf7180000302685:196244-196508 + TACAGCAGCAGCAACAACAGCAT---TTACAGCAGCAGCAACAACAGC---AT---------T--T-A----------------------CA---GCAGCAGCAGCAT---------------T------------------------------------------------------------------------------------TAC----AGC-----------AGCAGCAACAACAGCAT--CTACAGCAGCA----GCAACAACAGCATTTA--------------CAGCAGCAGCAG------------------------------------------C---AGCAGCATTTACAGC------------------------------------AGCAGCAGCAACAGCATCTAC------------------------------------------------------------AGCAGCAGC---AGCAA-C---------------A---------------------------------TC-----------A------CCAGCAG----CAACAACAA---CAGCAT---------------CTAC------AGCAGCAACAG----------------CAGCAGCTGCAGCAAC------------------AT---------------------------------------------------C-TACA---GCAGCAACAGC------------A---------------------------------------------------------GCAGC-------------------------------------ATCA
droFic1 scf7180000454065:151436-151684 - AGCAACAGCAGCAGCAGCAGCAG---CAACATCAGCAGCACCAACAGC---AC---------C--T-G----------------------CA---GCAGCAAC---AC---------------C------AGCAGCAT--------------A---------TA---------CTGC----AGCA---GCAGC------------AGCAGCAG-----C----------AACAGCAA------------------------------------CAC-----------------CAGCATCACGTACAGCAGCAACATCATGGGAATGCGCTGCATCCGCATCATA---------------CGCACC------------------------------------A------------------------------------------------------------------------------------GCAGC---AGC----AAC---------------------------------------------------------------------------------AACAC---------CAGCA-------ACA--GCAG------------CAG----------------CAACAGCAACAACAGC------AGCAACAGCAACATG----------------------------------------------------CACA------------GC------------A---------------------------------------------------------GCAACATCA--------------------------------TGCCG
droEle1 scf7180000491193:3102753-3103019 - AGCAACAGCAGCAACACCAACAA---CACGTACACCAGCAGCATCAA----------------------------------------------------------------------------GCACACCAGCAGCAT--------------GTTGCCGCTGTCC---------TGC----ATC------------------AA--------------C----------AACAGCAA------------------------------------CACTCT--------------CAGCATCACAACCAGCAGCAACATCTTGGCCATACGCTTCATCCGCATCATA---------------CACACC------------------------------------AGC---AA---------------------------------------------------------------------------------C---AGCAGC-AAC---------------------------AACAACAGCAGCAGCAGCAGCAACA---------------------------GCAACAA---------CAGCAGCAGCAG---CAGC------AACAACACCAC----------------CAACATCAGCAGCAGC------------------ATG----------------------------------------------------CACA------------GC------------A---------------------------------------------------------GCAACATCA--------------------------------TGCCG
droRho1 scf7180000778058:6229-6511 - AGCAGCAGCAACAACAGCAGCAG---CAACTACAGCAGCAGCAGCAAC---AACAGCAGCATA--C-C----------------------CA---GCCGGATC---C--------------------------------------------------------G---------CTGC----AGC---------------------------------------------------------AACTAACCA---ACTACACGCAGCAG------CAGTT-GCCGCAGAGCTACC-CACAACACCGTCCCCAGCCATATCAGCAGAATGTCTATCAGCAATATCATC---------------CGCAGG------------------------------------C------------------------------------------------------------------------------------GCAGC---AACAT-C---------------A---------------------------------AG-----------C------CACACA-------GCAACAT---------CCGGC-------GGC--GCCACAGCAACAACAGCCG----------------CCAGAACAAC---AGT------------------TGGC------------------------------------------CTATCAAC-CACA---CTACCAACAGC------------A---------------------------------------------------------GCCAC-------------------------------------GCTA
droBia1 scf7180000298389:212807-213093 - AGCAGCAACAGCAGCAGCAGCAA---CAACAGCAACAGCAGCAGCAGC---AA---------C--A-A----------------------------CAACA-------CACCCAACGGTGCGC----------------------------------------------------------AGCA---GCAGCAGCAAC------ATCACC--AG-------------CAGCAACA--------------------------------------------------------------------------------------------------------TCATC---------------------------------------------------------------------------AGC------------------------------------------------------------AGCAGCAGC---AGCAG-C---------------ATCACCAACA------------GCAAC------------G---GGTTG---TTGCCAGCAGCAACCAGCAACAG---------CAGCA-------GCT--GCAGCAGCAACAGCAGCAG----------------CAGCAGCAACAGCAG----------------------------------------------------------------------------------CAGCAGCAGC------------ATGATAATGGACCAACGTCCCATCATTTGCATCAATCATCTATCAGCATCTCTAATCAGCAGA-------------------------------------ATAA
droTak1 scf7180000415394:316022-316283 - AGCAGCAGCAGCATCCGCATCAT---CACCACCAGCAACACCAGCAGC---AC---------T--C-G----------------------CA---GCTACTTT---C-----------------------------------------------------------------GCAGCAGCA-------GCAA------C------ACTCGC----AAC-----------AGCAGCAG------------------------------------CACTCG--------------CAGCAAC---------------------------------------ATGCCCAGCA---GC---------------------------------TGCAACATGCGCAACAGC---TG---------------------------------------------------------------------------------C---AGCAGC-AAC---------------------------ACTCGCAGCAGCAGCACCACTCGCA-----------------GCA-------GCAGCAGCACT---CG---------------CAGC------AACATCACCAC----------------CACCAGCAACACCAGC---------------------------------------------------------AGCTGCATCTCGATC-CGCA------------GCAGCAGCATCCGCA---------------------------------------------------------GTAC-------------------------------------GGTCA
droEug1 scf7180000409110:1021850-1022124 - AGCAGCAACAACAATAGTAACAA---CAACAGCAGCAGCAGCAACAAC---AA---------C--A-A----------------------------C---A-------CACCAAACGGTGCAC----------------------------------------------------------AGCAGCAGCAA------C------ATCAGC--AG-------------CAGCAGCA-----------------GCAG---------------------------------------CAGC---------------------------------------ACCATCAACAGC------------------------------------------------------------------------------------------------------------------------------------------------AGCAG-C---------------ATCACCAACA------------GCAAC------------AACGTGTTG---TTGCCAGCA----------------------------GCAAC-----CAGC------AACAACAGCTG----------------CAACAGCAACAGCAAC------------------AGC----------------------------------------------------AACA---ACAGCAGCAGC------------ATGATAATGGACCAACGTCCCATCATTTGCATCAATCATCTATCAGCATCTCTAATCAGCAAA-------------------------------------ATAA
dm3 chr3L:7824030-7824305 - AGCAACAGCAGCAGCATCAACAG---CAGCAGCAACACCAACAGCACC---TA---------C--A-G----------------------------CAACACCATCAA---------------GCGCACCATCAGCAT--------------G---------TCC---------TGC----AGCA---GCAGC------------AGCAGCAG-----C----------AACAGCAG------------------------------------CACTCC--------------CAGCATCAGCATCAGCAGCAACATCACGGCCACCCGTTGCATCCGCATCATA---------------CACACC---------------------AGCAGCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCAGCAG---CCGCCG---------------CCGC------AACACCACCAG----------------CAGCAGCAACAGCAGC------------------ACG----------------------------------------------------CACA---GCAGCAGCAGC------------A---------------------------------------------------------GCAGCATCA--------------------------------TGCCG
droSim2 3l:7655137-7655385 - AGCAGCATCAACAGCAGCAACAC---CAACAGCACCTACAGCAACACC---AT---------C--A-A-------------------------------------------------------GCGCACCATCAGCAT--------------G---------TCC---------TGC----AGCA---GCAAC------------AGCAGCAG-----C----------AACAGCAG------------------------------------CACTCC--------------CAGCATCAGCATCAGCAGCAACATCACGGCCACCCACTGCATCCGCATCATA---------------CACACC------------------------------------A------------------------------------------------------------------------------------GCAGC---A----------------------------------------------------------------------------------------GCAACAA---------CAGCAGCAGCCG---CCGC------AACACCACCAG----------------CAGCAGCAACAGCAGC------------------ACG----------------------------------------------------CACA---GCAGCAGCAGC------------A------------------------------------------------------------GCATCA--------------------------------TGCCG
droSec2 scaffold_0:3495416-3495664 - AGCAGCAGCAGCACCAGCCACAT---CAGCAGCAGCAGCAGCAGCAAC---AA---------G--C-G----------------------TT---GCATCTGC---------------------------------------------------------------------------------AGCA---GC---------AG---CAA--------C----------AGCAACAA------CATTCCA---GTAACATG-----------------------------------------GCACAAAAACGTGATCGTGATCGTGATCT--CTCAACGTCA-----------------------------------------------------------------------------------------------------------------------------------------AATGGCAACGGCAACAGC----AGCAACACCAACAACATCAACAACAACAA------------C------------AC---CTCCCTGGACCCAACA----------------------------------------------------------G----------------CAACATCC-----AGC---------------------------------------------------------AACTGCAGCT----CAAGCA---GCAGCAACAAC------------A---------------------------------------------------------GCGC-------------------------------------TGCCA
droYak3 3L:4195154-4195405 + AGCAGCAGCAACAACAGCAGCAA---CAGCAGCAACACCAGCAGCAAC---AT---------C--A-G----------------------------CAGCAATAC------------------C------A-----------------------------------------GC-------------A--------------------------G-------------CAA------------------------------------------CACTAT--------------CAGCAAC---------------------------------------ATTATCAGCAGCAGCAGCACTTGTACC------------------------------------AGCATC------------------ATCCCAGCCTGGCGC---TGCCTGGTAGTTTGCCACCCGCTGTCGAGGTGGTGGAGTTGCAACTGCAGCAAC----A---------------------------------------------------------------------------------GCAGCAT---------CAGCA-------GCA--GCAGCAGCAACATCTGCAG----------------C---A-CAACAACAG----------------------------------------------------------------------------CA---GTAGCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------CCCA
droEre2 scaffold_4784:6340890-6341132 + AGCAGCAGCAGCAACAGCAGCAG---CAGCAGCAGCAACACCAGCAGCAGCAT---------C--A-G----------------------------CAGCAAT---AC---------------C------A------------------------------------------------------------GCA--------------------G-------------CAA------------------------------------------CACTAT--------------CAGCAAC---------------------------------------ATTATCAGCAGC---AGCACTTGTACC------------------------------------AGCATC------------------ATCCCAGCCTGGCGC---TGCCTGG---CTTGCCACCCGCTGTCGAGGTGGTGGAGTTGCAACTGCAGCAGC----A---------------------------------------------------------------------------------GCAACAT---------CAGCA-------GCA--GCAGCAGCAGCATCTGCAG----------------C---------------------------------A----------------------------------------------------C-AACA---ACAGCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------CCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGCAGCAGCAGCAACAGCAACAA---CAACAGCAGCAGCAGCAGCAGC---AA---------A--A-G------------------------------------------------------------------------------------GTGGCCGCCACCCTGGCCCTACAGCATCA-------TCAA------C------ATCATC----AGC-----------AACAGCAA------------------------------------CAC-----------------------------------------C------------------------------------------------------------------------------------------------------AGAGCCTGCCCGCCCTGCAGCCCATGCCCGC---CCTGAGCTCCATCTTCGAGCCTTCGACGGAGCAGCAGCAGCAGC----AGCAACAGCAACAGCTGCAGATGCAACAAC------------------------TG---ATCA----------------------------------------------------------------CTGCCAG----------------CAACAACCATAATGCC------------------TC--------------------------GAATAAT----CT----------------AA---GTAGCATCAAC------------A---------------------------------------------------------GCAC-------------------------------------TGCCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................GCAGCAGCAGC---AA---------A--A-G------------------------------------------------------------------------------------GTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCTTCGACGGAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCATGCCCGC---CCTGAGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................CTACAGCATCA-------TCAA------C------ATCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGCAACAAC------------------------TG---ATCA----------------------------------------------------------------CTGCCA................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---GTAGCATCAAC------------A---------------------------------------------------------GCAC-------------------------------------TGC..2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGCCTTCGACGGAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................AGCAGCAGCAGC---AA---------A--A-G------------------------------------------------------------------------------------GTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGCCTTCGACGGAG......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACGGAGCAGCAGCAGCAGC----A....................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACGGAGCAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---ATCA----------------------------------------------------------------CTGCCAG----------------CAACAACCATAAT..................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................................................................GCATCA-------TCAA------C------ATCATC----AGC-----------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................GCAACAA---CAACAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530200100000
..........................CAACAGCAGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530300000000
....................CAA---CAACAGCAGCAGCAGCAGCAGC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020100000001
.....................AA---CAACAGCAGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC----AGCAACAGCAACAGCT.....................................................................................................................................................................................................................................................................................................................................................................20130.0810100000000
................GCAACAA---CAACAGCAGCAGCAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
............AACAGCAACAA---CAACAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..............................AGCAGCAGCAGCAGCAGC---A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
..............CAGCAACAA---CAACAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.........AGCAACAGCAACAA---CAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.................CAACAA---CAACAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
...................ACAA---CAACAGCAGCAGCAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.................CAACAA---CAACAGCAGCAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCAGCAGCAGCAGC----.....................................................................................................................................................................................................................................................................................................................................................................................18200.0510010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGC----AGCAACAG.............................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
AGCAGCAGCAGCAACAGCAACAA---CAACAGCAGCAGCAGCAGCAGC---AA---------A--A-G------------------------------------------------------------------------------------GTGGCCGCCACCCTGGCCCTACAGCATCA-------TCAA------C------ATCATC----AGC-----------AACAGCAA------------------------------------CAC-----------------------------------------C------------------------------------------------------------------------------------------------------AGAGCCTGCCCGCCCTGCAGCCCATGCCCGC---CCTGAGCTCCATCTTCGAGCCTTCGACGGAGCAGCAGCAGCAGC----AGCAACAGCAACAGCTGCAGATGCAACAAC------------------------TG---ATCA----------------------------------------------------------------CTGCCAG----------------CAACAACCATAATGCC------------------TC--------------------------GAATAAT----CT----------------AA---GTAGCATCAAC------------A---------------------------------------------------------GCAC-------------------------------------TGCCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC------------------------TG---ATCA----------------------------------------------------------------CTGCCAG----------------...............................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC------------------------TG---ATCA----------------------------------------------------------------CTGCCAG----------------C..............................................................................................................................................................................................................................2011.001001000
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...........CAACAGCAACAA---CAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..................AACAA---CAACAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC----AGCAACAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................21200.051001000
droWil2
GGCAGCAACAACAACAGCAACAA---CAACTGCAGCAGCAACAACAGC---AA---------C--A-G----------------------------CAGCAACAA------------------T------G-----------------------------------------GC-------------A---GCA------ACAA---CAAC--AG-------------C------------AACAA--CA---ACTGCA-GCAGCAA------CAATT-G------------C-AGCAAC---------------------------------------AACAGCAAC---AGC---------------------------------AGCAACAATGGCAGCAAC---AA---------------------------------------------------------------------------------C---AACAGC-AAC---------------------------AACAACTGCAGCAGCAACAACAACA-----------------GCA-------GCAACAACAACTGCAG---------------CAGC------AACAATTGCAG----------------CAACAACAACAACAGC------------------AG---------------------------------------------------C-AACA---ACAACAGCAGC------------A---------------------------------------------------------GCAAC-------------------------------------AACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
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..........................................AACAGC---AA---------C--A-G----------------------------CAGCAACAA------------------T------G-----------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGC------------------AG---------------------------------------------------C-......................................................................................................................................19200.10202000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AACA---ACAACAGCAGC------------A---------------------------------------------------------GCAAC-------------------------------------....22200.10200020
...................................................................................................................................................................................................................................................CAA--CA---ACTGCA-GCAGCAA------CAATT-G------------C-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
..............................TGCAGCAGCAACAACAGC---A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.08100001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAG----------------CAACAACAACA....................................................................................................................................................................................................................19130.08100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAACAACAACA-----------------GCA-------GCAACA.............................................................................................................................................................................................................................................................................................28140.07100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGCAGCAGCAACAACAACA-----------------.............................................................................................................................................................................................................................................................................................................25150.07101000
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GGCAGCAACAACAACAGCAACAA---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................................G------------C-AGCAAC---------------------------------------AACAGCAAC---AGC---------------------------------AGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
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..................................................................................................................................G-----------------------------------------GC-------------A---GCA------ACAA---CAAC--AG-------------C------------AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------CAACAACAACAACAGC------------------A............................................................................................................................................................................................20200.05100010
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGCAG---------------CAGC------AACAATTG..................................................................................................................................................................................................................................................23200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------AACAACTGCAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................AACAATGGCAGCAAC---AA---------------------------------------------------------------------------------C---AACAGC-A....................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.................................................................A-G----------------------------CAGCAACAA------------------T------G-----------------------------------------GC-------------A---GCA------ACAA---CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...................................................................................................................................................................................................................................................CAA--CA---ACTGCA-GCAGCAA------CAATT-G------------C-AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.................................................................................................................................................................................................................................................AACAA--CA---ACTGCA-GCAGCAA------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGC------------A---------------------------------------------------------GCAAC-------------------------------------AACA21200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGCAG---------------CAGC------AACAATTGCAG----------------C..............................................................................................................................................................................................................................28200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................ACAATGGCAGCAAC---AA---------------------------------------------------------------------------------C---AACAGC-A....................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGC------------------AG---------------------------------------------------C-AACA---ACAACA.........................................................................................................................23200.05100001
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACAGC-AAC---------------------------AACAACTGCAG............................................................................................................................................................................................................................................................................................................................................21200.05101000
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....................................................................................................AACAA------------------T------G-----------------------------------------GC-------------A---GCA------ACAA---CAAC--AG-------------C------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------C-AACA---ACAACAGCAGC------------A---------------------------------------------------------GCA...........................................21200.05101000
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACA-----------------GCA-------GCAACAA............................................................................................................................................................................................................................................................................................23200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------C-AACA---ACAACAGCAGC------------A---------------------------------------------------------GCAAC-------------------------------------A...25200.05100010
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------AG---------------------------------------------------C-AACA---ACAACAGCAGC------------A---------------------------------------------------------GCAA..........................................26200.05101000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---ACAACAGCAGC------------A---------------------------------------------------------GCAA..........................................20200.05100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA-----------------GCA-------GCAACAA............................................................................................................................................................................................................................................................................................20200.05100010
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..................................................................................................................................................................................................................................................................................AATT-G------------C-AGCAAC---------------------------------------AACAGCAAC---AGC---------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------CAACAACAACAACAGC------------------AG---------------------------------------------------C-......................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................................................AC---------------------------------------AACAGCAAC---AGC---------------------------------AGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.....................................................................................................ACAA------------------T------G-----------------------------------------GC-------------A---GCA------ACAA---CAAC--AG-------------C------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.....................................................................................................................................................................................................................................................................................T-G------------C-AGCAAC---------------------------------------AACAGCAAC---AGC---------------------------------AGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------CAACAACAACAACAGC------------------AG---------------------------------------------------C-AAC...................................................................................................................................25200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------CAACAACAACAACAGC------------------AG---------------------------------------------------C-A.....................................................................................................................................21200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG----------------CAACAACAACAACAGC------------------AG---------------------------------------------------C-A.....................................................................................................................................24200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................CAACAATGGCAGCAAC---AA---------------------------------------------------------------------------------C---AACAG.......................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------C-AACA---ACAACAGCAGC------------A---------------------------------------------------------GCAAC-------------------------------------A...24200.05100010
..................................GCAGCAACAACAGC---AA---------C--A-G----------------------------CAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.....................................GCAACAACAGC---AA---------C--A-G----------------------------CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
...............................................................................................................................................................................................................CAAC--AG-------------C------------AACAA--CA---ACTGCA-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................AA------------------T------G-----------------------------------------GC-------------A---GCA------ACAA---CAAC--AG-------------C------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.................................................................................................................................................................................................................AC--AG-------------C------------AACAA--CA---ACTGCA-GCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..................................GCAGCAACAACAGC---AA---------C--A-G----------------------------CAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................................................................................................................................................................................................AAC--AG-------------C------------AACAA--CA---ACTGCA-GCAGCAA------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
droVir3
TGCAGCAGCAGCAGCAGCAACAA---CAACAGGAGCAGCAGCAGCAGC---AA---------A--C-A----------------------CC---GCAGCAGC---------------------------------------------------------------------------------AGCA---GC---------AAGAACAGC--AA-------------CAGCAGCA-----------------GCA-------GCAA------CAACA-T------------C-AGCAAC---------------------------------------AACTCA---------------ATCAGC---AGCAGCAGCAGCAACAACAACAGCAA------------------------------------------------------------------------------------------------C---AACAA-C---------------T---------------------------------CA-----------A------CCAGCA-----------------------------------------------------------------------------GCAGCAACAACAACTGCAGCAGCAGCAGCAGCTGGCTTTGCCGCACAGTCATCATGCCCTGATGCAG----------------------CA---GTCGCATCAGC------------A---------------------------------------------------------GCA--------------------------------------GGCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------------------------------------------------------------C---AACAA-C---------------T---------------------------------CA-----------A------CCAGCA-----------------------------------------------------------------------------G............................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCAGCAGCAGCAGCTGG..........................................................................................................................................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
............AGCAGCAACAA---CAACAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.402001000000000000000001000000000000000000000000000000000000000000
..............CAGCAACAA---CAACAGGAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251000000000000010000000000000000000000000000000000000000000000000
.....................AA---CAACAGGAGCAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201000000000000000000000000000000000000000000000000000000000000100
...................................................................................................CAGC---------------------------------------------------------------------------------AGCA---GC---------AAGAACAGC--AA-------------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201001000000000000000000000000000000000000000000000000000000000000
..................AACAA---CAACAGGAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................GAACAGC--AA-------------CAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.102000000000000000000000000000000000000000000000000000000000000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACTGCAGCAGC......................................................................................................................................................................................................18200.102000000000000000000000000000002000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAACAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGCAGCA-----------------GCA-------GCAA------CAACA-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000020000000000000000000000000000000000
............................................................................................................................................................................................................GAACAGC--AA-------------CAGCAGCA-----------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.081001000000000000000000000000000000000000000000000000000000000000
..................AACAA---CAACAGGAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.081000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACTGCAGCAGCAGCAGCA...............................................................................................................................................................................................26140.071001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAACAACAGCAA------------------------------------------------------------------------------------------------C---C...........................................................................................................................................................................................................................................................................................................................................................................................23200.051100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATCAGC---AGCAGCAGCAGCAACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GC--AA-------------CAGCAGCA-----------------GCA-------GCAA------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................ACAGC--AA-------------CAGCAGCA-----------------GCA-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAACAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACTGCAGCAGCAGCAGC................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAACAACAGCAA------------------------------------------------------------------------------------------------C---AAC.........................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................A-------------CAGCAGCA-----------------GCA-------GCAA------CAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
.......GCAGCAGCAGCAACAA---CAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAACAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
...AGCAGCAGCAGCAGCAACAA---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACTGCAGCA........................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAACAACAGCAA------------------------------------------------------------------------------------------------C---A...........................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACTGCAGCAGCA.....................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
............................ACAGGAGCAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTGCAGCAGCAGCAGCA...............................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..............................AGGAGCAGCAGCAGCAGC---A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................CAGC--AA-------------CAGCAGCA-----------------GCA-------GCAA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGC---AGCAGCAGCAGCAACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.GCAGCAGCAGCAGCAGCAACAA---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
AGCAGCAGCAGCAGCAGCAACAG---CAGCATCAGCAGCAGCAGCAGC---AA---------C--A-A----------------------------CAGCAGCAG------------------C------A------------------------------------------------------------A------CAGCAACAGCAGC--AG-------------CAACAACA-----------------GCAGCA----GCAGCAA---CAGCA-G------------C-AGCAGC---------------------------------------AGCAGCAAC---AGC---------------------------------AGCAACAGCAGCAACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AACAGCAGCAGCAGCAACAACAGCA-----------------GCA-------GCAACAACATC---AG---------------CAGC------AGCAGCAACAT----------------CATCATCAGCAGCAGC-------------------------------------------------------------------------AGCA---ACATCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------AGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAT----------------CATCATCAGCAGCAGC-------------------------------------------------------------------------AGCA---A..............................................................................................................................2620.501000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCAGCAGC-------------------------------------------------------------------------AGCA---ACATCA.........................................................................................................................2620.501100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCAGC-------------------------------------------------------------------------AGCA---ACAT...........................................................................................................................2330.331000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCAGC-------------------------------------------------------------------------AGCA---ACATCAGCA......................................................................................................................2430.331000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------GCA-------GCAACAACATC---AG---------------CAGC------..........................................................................................................................................................................................................................................................2170.292200000
.................................................................................................................................................................................................................................................................................................................................................................C---------------------------------AGCAACAGCAGCAACAGC---AG---------------------------------------------------------------------------------C---............................................................................................................................................................................................................................................................................................................................................................................................22200.255000050
.................................................................A-A----------------------------CAGCAGCAG------------------C------A------------------------------------------------------------A------CAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153300000
.................................................................................................................................................................................................................GC--AG-------------CAACAACA-----------------GCAGCA----GCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153000030
.....................................................................................................................................................................................................................................AACAACA-----------------GCAGCA----GCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153300000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAACAGCA-----------------GCA-------...................................................................................................................................................................................................................................................................................................22200.153300000
.............GCAGCAACAG---CAGCATCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.131000010
.................................................................A-A----------------------------CAGCAGCAG------------------C------A------------------------------------------------------------A------CAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102200000
................................................................................................................................................................................................................................................................GCA----GCAGCAA---CAGCA-G------------C-AGCAGC---------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
........................................GCAGCAGC---AA---------C--A-A----------------------------CAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
...............................................................................................................................................................................................................................................................................................................................................................................................................AACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AAC....................................................................................................................................................................................................................................................................................................................................................21200.102000020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCA-----------------GCA-------GCAACAACA..........................................................................................................................................................................................................................................................................................21200.102200000
....................................................................................................................................................................................................................................................................................................................................................GCAGCAAC---AGC---------------------------------AGCAACAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCA-----------------GCA-------GCAACAAC...........................................................................................................................................................................................................................................................................................22200.102200000
.....................................................................................................GCAG------------------C------A------------------------------------------------------------A------CAGCAACAGCAGC--A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
................................................................................................................................................................................................................AGC--AG-------------CAACAACA-----------------GCAGCA----GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
...................................................................................................................................................................................................................................................................................................................................................................................................................GC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AACAGC.................................................................................................................................................................................................................................................................................................................................................20200.102200000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-.....................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
.................................................................................................AGCAGCAG------------------C------A------------------------------------------------------------A------CAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000200
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACATC---AG---------------CAGC------AGC.......................................................................................................................................................................................................................................................20130.081010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC-------------------------------------------------------------------------AGCA---ACATCAGCAGC------------A---------------------------------------------------------..............................................25150.071100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC-------------------------------------------------------------------------AGCA---ACATCAGCAGC------------........................................................................................................24160.061000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-AGC---------------------------AACAGCAGCAGCAGCAACAACAGC...............................................................................................................................................................................................................................................................................................................................29180.061000010
.......................................................................................................................................................................................................................................CAACA-----------------GCAGCA----GCAGCAA---CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...AGCAGCAGCAGCAGCAACAG---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGC---AG---------------------------------------------------------------------------------C---A...........................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
...........................................................................................................................................................................................................................................................................................................C---------------------------------------AGCAGCAAC---AGC---------------------------------AGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATC---AG---------------CAGC------AGCAGCA...................................................................................................................................................................................................................................................20200.051000001
.............GCAGCAACAG---CAGCATCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AACA...................................................................................................................................................................................................................................................................................................................................................28200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AACAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................24200.051100000
.................................AGCAGCAGCAGCAGC---AA---------C--A-A----------------------------CAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
..................................................................................................................................A------------------------------------------------------------A------CAGCAACAGCAGC--AG-------------CAACAACA-----------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACATC---AG---------------CAGC------AGCAGC....................................................................................................................................................................................................................................................21200.051100000
...........................................................................................................................C------A------------------------------------------------------------A------CAGCAACAGCAGC--AG-------------CAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
............................................CAGC---AA---------C--A-A----------------------------CAGCAGCAG------------------C------A------------------------------------------------------------A------CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAACAACAGCA-----------------.............................................................................................................................................................................................................................................................................................................25200.051100000
.........................................................................................................................................................................................................................................................................................................AGC---------------------------------------AGCAGCAAC---AGC---------------------------------AGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAACAGCA-----------------G............................................................................................................................................................................................................................................................................................................19200.051100000
.......................................................................................................................................................................................................AGCAACAGCAGC--AG-------------CAACAACA-----------------GCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000010
......................................CAGCAGCAGC---AA---------C--A-A----------------------------CAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
......................................CAGCAGCAGC---AA---------C--A-A----------------------------CAGCAGCAG------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAACAGCA-----------------GCA-------GCAA...............................................................................................................................................................................................................................................................................................26200.051000010
...............................................C---AA---------C--A-A----------------------------CAGCAGCAG------------------C------A------------------------------------------------------------A------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
......................G---CAGCATCAGCAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACATCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------AG..23200.051000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC-------------------------------------------------------------------------AGCA---ACATCAGCAGC------------........................................................................................................20200.051100000
.............................................AGC---AA---------C--A-A----------------------------CAGCAGCAG------------------C------A------------------------------------------------------------A------CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
......................G---CAGCATCAGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................19200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACATCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------AGCA25200.051000010
.......................................................................................................AG------------------C------A------------------------------------------------------------A------CAGCAACAGCAGC--AG-------------CAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
..................................................................................................................................................................................................................................................................A----GCAGCAA---CAGCA-G------------C-AGCAGC---------------------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCAGC-------------------------------------------------------------------------AGCA---...............................................................................................................................19200.051100000
.................................................................................................................................................................................................................................................................................................................................................................C---------------------------------AGCAACAGCAGCAACAGC---AG---------------------------------------------------------------------------------C---AGCAG.......................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACATCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------AGC.22200.051000001
.....................................................................................................................................................................................................................................................................................A-G------------C-AGCAGC---------------------------------------AGCAGCAAC---AGC---------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
......................................................................................................................................................................................................................G-------------CAACAACA-----------------GCAGCA----GCAGCAA---CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AACAGCA................................................................................................................................................................................................................................................................................................................................................24200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................GC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AACAGCA................................................................................................................................................................................................................................................................................................................................................21200.051001000
...................ACAG---CAGCATCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
..............................................................................................................................................................................................................................................................CAGCA----GCAGCAA---CAGCA-G------------C-AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-------------------------------------------------------------------------AGCA---ACATCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------....23200.051100000
......................................................................................................................................................................................................CAGCAACAGCAGC--AG-------------CAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
.......................................................................................................................................................................................................AGCAACAGCAGC--AG-------------CAACAACA-----------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------AAC....................................................................................................................................................................................................................................................................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGC---AG---------------------------------------------------------------------------------C---AGCAGC-AGC---------------------------.......................................................................................................................................................................................................................................................................................................................................................27200.051100000
droGri2
AGCAGCAACAGCAACAGCAACAG---CAGCAGCAGCAGCAGCAGCAGC---AT---------G--A-G----------------------CA---ACAACAAC---GG---------------C------A------------------------------------------------------------ACA------GCAACAGCAGC--AG-------------CAACAACA-----------------GCAACA----ACAAC--------------------------AACAAC---------------------------------------AAATGCATCA---CC------ATCACC---------------------ATCATCAGCAAC---A------------------------------------------------------------------------------------ACAAC---AAC----AGC------------------------------------AAC------------A---------------------------GCAGCAG---------CAG------------CAAC------AACAACAGCAA----------------CAACAGCAGCAGCAGC------------------A-------------------------------------------------------ACAACAACAGCAGCAGC------------A------------------------------------------------------------ACAGCAATCGTCTCGCTCGGCAGCTAGTCCGTTGTCGCCGCCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................ATGCATCA---CC------ATCACC---------------------ATCATCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
.........................................................................................................................................................................................................................................................................................................................................................ATCA---CC------ATCACC---------------------ATCATCAGCAAC---A------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
.................CAACAG---CAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202
...........CAACAGCAACAG---CAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101
.............................................................................................................................................................................................................AGCAGC--AG-------------CAACAACA-----------------GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05110
.....................................................................................................................................................................................................................AG-------------CAACAACA-----------------GCAACA----ACAAC--------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---------CAG------------CAAC------AACAACAGCA................................................................................................................................................................................................................................................23200.05101
.............................................................................................................................................................................................................AGCAGC--AG-------------CAACAACA-----------------GCAACA----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AAC----AGC------------------------------------AAC------------A---------------------------GCAGCA.............................................................................................................................................................................................................................................................................................19200.05110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------CAG------------CAAC------AACAACAGCAA----------------CAACA..........................................................................................................................................................................................................................28200.05110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------------------A-------------------------------------------------------ACAACAACAGCAGC.......................................................................................................................21200.05110
droAna3
AGCAGCAGCAACACCAGCAACAA---CAACAGCAGCAACATCAGCTGC---AA---------C--A-G----------------------------CACCAACAA------------------C------A-----------------------------------------GT-------------T--------------------------G-------------CAACACCAACAGCAGCAA--CA---ACAG------------------------------------------------------------------------------------------CAAC---AGCACCTGCATCAGCAACAACTGCAGCCACATCAGCAGCAAATGCAACACC---AT---------------------------------------------------------------------------------C---AGCA-------------------------------------------------------------------------------------GCAACAA---------CAGCA-------GCA--GCAGCAGCAACAGCATCAGCAACTGTTGCACGAATC-GCAGCAGCAGCAAC------------AGCAGCAG---------------------------C---------AGCAGCAATACCATC-CGCA------------TCACCTGC------A---------------------------------------------------------TCCGC-ACA----------------GT--------------CTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................AACACCAACAGCAGCAA--CA---AC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCATCAGCAACTG.........................................................................................................................................................................................................................................2320.501100000
........................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------------------------------------------------------------------C---AGCA-------------------------------------------------------------------------------------GCAACAA---------CAGCA-------GCA--GCAGC.............................................................................................................................................................................................................................................................2760.171010000
........................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------------------------------------------------------------------C---AGCA-------------------------------------------------------------------------------------GCAACAA---------CAGCA-------GC.....................................................................................................................................................................................................................................................................2190.111010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GCA--GCAGCAGCAACAGCATCA................................................................................................................................................................................................................................................22120.081000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------CAGCA-------GCA--GCAGCAGCAAC.......................................................................................................................................................................................................................................................24200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAAC------------AGCAGCAG---------------------------C---------A.....................................................................................................................................................21200.051000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAAC------------AGCAGC.............................................................................................................................................................................................20200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC------------AGCAGCAG---------------------------C---------AGCAGCA...............................................................................................................................................24200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------GCAACAA---------CAGCA-------GCA--GCAGCAGCA.........................................................................................................................................................................................................................................................25200.051001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAAC------------AGCAGCAG---------------------------C---------AGCAGCA...............................................................................................................................................25200.051000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA-------------------------------------------------------------------------------------GCAACAA---------CAGCA-------GCA--GCAGC.............................................................................................................................................................................................................................................................24200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------GCAACAA---------CAGCA-------GCA--GCAG..............................................................................................................................................................................................................................................................20200.051010000
droBip1
AGCAGCAGCAGCAACTG-ATCAACAATCTCAGCAACGGCAACAATGTT---GC---------AAATGGCACCTTGCCACCGCCAACGCAATTGTTGCAGCATC---AT---------------TTGCAGCATCTGGC-CCATGTGAACGTGAA---------------------TGC----GGCA---GCTGC------------AGTGGTGG-----CTGTGGCAGCCA--------------------------------------------ACAAC--------------CTGCAACAGCAACAGCAGCAACA----------------------------------------------TGCG---------------------AAC----------------------------------------------------------------------------------------------------------------------AGCAACAGCAAT------------------------------GGTGGCA------------------------------------------------------------AC------AACAGTAGCAA----------------CAATAACAACAACACC------------------ATA---------------------CTCAATCACAACAATCT----------------CA---ATATCATAATC------------A---------------------------------------------------------ATA---------------------------------------ACCASizeHit CountTotal NormTotal
No Reads
droKik1
TACAGCAGCAGCAACAACAGCAT---TTACAGCAGCAGCAACAACAGC---AT---------T--T-A----------------------CA---GCAGCAGCAGCAT---------------T------------------------------------------------------------------------------------TAC----AGC-----------AGCAGCAACAACAGCAT--CTACAGCAGCA----GCAACAACAGCATTTA--------------CAGCAGCAGCAG------------------------------------------C---AGCAGCATTTACAGC------------------------------------AGCAGCAGCAACAGCATCTAC------------------------------------------------------------AGCAGCAGC---AGCAA-C---------------A---------------------------------TC-----------A------CCAGCAG----CAACAACAA---CAGCAT---------------CTAC------AGCAGCAACAG----------------CAGCAGCTGCAGCAAC------------------AT---------------------------------------------------C-TACA---GCAGCAACAGC------------A---------------------------------------------------------GCAGC-------------------------------------ATCASizeHit CountTotal NormTotal
No Reads
droFic1
AGCAACAGCAGCAGCAGCAGCAG---CAACATCAGCAGCACCAACAGC---AC---------C--T-G----------------------CA---GCAGCAAC---AC---------------C------AGCAGCAT--------------A---------TA---------CTGC----AGCA---GCAGC------------AGCAGCAG-----C----------AACAGCAA------------------------------------CAC-----------------CAGCATCACGTACAGCAGCAACATCATGGGAATGCGCTGCATCCGCATCATA---------------CGCACC------------------------------------A------------------------------------------------------------------------------------GCAGC---AGC----AAC---------------------------------------------------------------------------------AACAC---------CAGCA-------ACA--GCAG------------CAG----------------CAACAGCAACAACAGC------AGCAACAGCAACATG----------------------------------------------------CACA------------GC------------A---------------------------------------------------------GCAACATCA--------------------------------TGCCGSizeHit CountTotal NormTotal
No Reads
droEle1
AGCAACAGCAGCAACACCAACAA---CACGTACACCAGCAGCATCAA----------------------------------------------------------------------------GCACACCAGCAGCAT--------------GTTGCCGCTGTCC---------TGC----ATC------------------AA--------------C----------AACAGCAA------------------------------------CACTCT--------------CAGCATCACAACCAGCAGCAACATCTTGGCCATACGCTTCATCCGCATCATA---------------CACACC------------------------------------AGC---AA---------------------------------------------------------------------------------C---AGCAGC-AAC---------------------------AACAACAGCAGCAGCAGCAGCAACA---------------------------GCAACAA---------CAGCAGCAGCAG---CAGC------AACAACACCAC----------------CAACATCAGCAGCAGC------------------ATG----------------------------------------------------CACA------------GC------------A---------------------------------------------------------GCAACATCA--------------------------------TGCCGSizeHit CountTotal NormTotal
No Reads
droRho1
AGCAGCAGCAACAACAGCAGCAG---CAACTACAGCAGCAGCAGCAAC---AACAGCAGCATA--C-C----------------------CA---GCCGGATC---C--------------------------------------------------------G---------CTGC----AGC---------------------------------------------------------AACTAACCA---ACTACACGCAGCAG------CAGTT-GCCGCAGAGCTACC-CACAACACCGTCCCCAGCCATATCAGCAGAATGTCTATCAGCAATATCATC---------------CGCAGG------------------------------------C------------------------------------------------------------------------------------GCAGC---AACAT-C---------------A---------------------------------AG-----------C------CACACA-------GCAACAT---------CCGGC-------GGC--GCCACAGCAACAACAGCCG----------------CCAGAACAAC---AGT------------------TGGC------------------------------------------CTATCAAC-CACA---CTACCAACAGC------------A---------------------------------------------------------GCCAC-------------------------------------GCTASizeHit CountTotal NormTotal
No Reads
droBia1
AGCAGCAACAGCAGCAGCAGCAA---CAACAGCAACAGCAGCAGCAGC---AA---------C--A-A----------------------------CAACA-------CACCCAACGGTGCGC----------------------------------------------------------AGCA---GCAGCAGCAAC------ATCACC--AG-------------CAGCAACA--------------------------------------------------------------------------------------------------------TCATC---------------------------------------------------------------------------AGC------------------------------------------------------------AGCAGCAGC---AGCAG-C---------------ATCACCAACA------------GCAAC------------G---GGTTG---TTGCCAGCAGCAACCAGCAACAG---------CAGCA-------GCT--GCAGCAGCAACAGCAGCAG----------------CAGCAGCAACAGCAG----------------------------------------------------------------------------------CAGCAGCAGC------------ATGATAATGGACCAACGTCCCATCATTTGCATCAATCATCTATCAGCATCTCTAATCAGCAGA-------------------------------------ATAASizeHit CountTotal NormTotal
No Reads
droTak1
AGCAGCAGCAGCATCCGCATCAT---CACCACCAGCAACACCAGCAGC---AC---------T--C-G----------------------CA---GCTACTTT---C-----------------------------------------------------------------GCAGCAGCA-------GCAA------C------ACTCGC----AAC-----------AGCAGCAG------------------------------------CACTCG--------------CAGCAAC---------------------------------------ATGCCCAGCA---GC---------------------------------TGCAACATGCGCAACAGC---TG---------------------------------------------------------------------------------C---AGCAGC-AAC---------------------------ACTCGCAGCAGCAGCACCACTCGCA-----------------GCA-------GCAGCAGCACT---CG---------------CAGC------AACATCACCAC----------------CACCAGCAACACCAGC---------------------------------------------------------AGCTGCATCTCGATC-CGCA------------GCAGCAGCATCCGCA---------------------------------------------------------GTAC-------------------------------------GGTCASizeHit CountTotal NormTotal
No Reads
droEug1
AGCAGCAACAACAATAGTAACAA---CAACAGCAGCAGCAGCAACAAC---AA---------C--A-A----------------------------C---A-------CACCAAACGGTGCAC----------------------------------------------------------AGCAGCAGCAA------C------ATCAGC--AG-------------CAGCAGCA-----------------GCAG---------------------------------------CAGC---------------------------------------ACCATCAACAGC------------------------------------------------------------------------------------------------------------------------------------------------AGCAG-C---------------ATCACCAACA------------GCAAC------------AACGTGTTG---TTGCCAGCA----------------------------GCAAC-----CAGC------AACAACAGCTG----------------CAACAGCAACAGCAAC------------------AGC----------------------------------------------------AACA---ACAGCAGCAGC------------ATGATAATGGACCAACGTCCCATCATTTGCATCAATCATCTATCAGCATCTCTAATCAGCAAA-------------------------------------ATAASizeHit CountTotal NormTotal
No Reads
dm3
AGCAACAGCAGCAGCATCAACAG---CAGCAGCAACACCAACAGCACC---TA---------C--A-G----------------------------CAACACCATCAA---------------GCGCACCATCAGCAT--------------G---------TCC---------TGC----AGCA---GCAGC------------AGCAGCAG-----C----------AACAGCAG------------------------------------CACTCC--------------CAGCATCAGCATCAGCAGCAACATCACGGCCACCCGTTGCATCCGCATCATA---------------CACACC---------------------AGCAGCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCAGCAG---CCGCCG---------------CCGC------AACACCACCAG----------------CAGCAGCAACAGCAGC------------------ACG----------------------------------------------------CACA---GCAGCAGCAGC------------A---------------------------------------------------------GCAGCATCA--------------------------------TGCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................C---TA---------C--A-G----------------------------CAACACCATCAA---------------GCGCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TCCGCATCATA---------------CACACC---------------------AGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ATA---------------CACACC---------------------AGCAGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................ACCATCAA---------------GCGCACCATCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................................................CCGTTGCATCCGCATCATA---------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAGCAACACCAACAGCACC---TA---------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATCCGCATCATA---------------CACACC---------------------AGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................C---TA---------C--A-G----------------------------CAACACCATCAA---------------GCGCACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ACC---------------------AGCAGCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AAC..................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------ACG----------------------------------------------------CACA---GCAGCAGCA......................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TCAGCATCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAG----------------CAGCAGCAACAGC..................................................................................................................................................................................................................2070.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................G---CAGCAGCAACACCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.3640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AACACCACCAG----------------CAGCAGCAAC.....................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACAGCAGCAGCATCAACAG---CAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CACACC---------------------AGCAGCAACAAC-------------------------------------------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCATCAGCATCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCATCAGCATCAGCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............AGCATCAACAG---CAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGCATCAGCAGCAACATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
AGCAACAGCAGCAGCATCAACAG---CAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GCAGCAG---CCGCCG---------------CCGC------..........................................................................................................................................................................................................................................................1880.2520000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----------------GCA-------GCAGCAG---CCGC.....................................................................................................................................................................................................................................................................................19120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002
.........AGCAGCATCAACAG---CAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AACAGCAGCAGCATCAACAG---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..CAACAGCAGCAGCATCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AACACCACCAG----------------CAGCAGC........................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CC---------------------AGCAGCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------.............................................................................................................................................................................................................................................................................................................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCAGCAGCATCAACAG---CAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CC---------------------AGCAGCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAAC...............................................................................................................................................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............AGCATCAACAG---CAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.1520000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GC...........................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCAGC..............................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------CAGCAGCAACAGCAGC------------------.............................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACACCACCAG----------------CAGCAGCA.......................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------A---------------------------------------------------------GCAGCATCA--------------------------------TGCCC1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------GCA-------GCAGCAG---CCGCCG---------------CCG.................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCA................................................................................................................................................................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCACCAG----------------CAGCAGCA.......................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................C---------------------AGCAGCAACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GC...........................................................................................................................................................................................................................................................................................................25150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..CAACAGCAGCAGCATCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAGCAGC------------A---------------------------------------------------------GCAGC.........................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCA................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..........GCAGCATCAACAG---CAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.0910000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAGCAGC------------A---------------------------------------------------------GCAGCATC......................................23120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCACCAG----------------CAGCAGCAACA....................................................................................................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........GCAGCATCAACAG---CAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-----------------GCA-------GCAGCAG---CCGC.....................................................................................................................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............GCATCAACAG---CAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAGCAGC------------A---------------------------------------------------------GCAGCAT.......................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCATCAGCATCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................ATCAGCATCAGCAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................CAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCAGCAG---.........................................................................................................................................................................................................................................................................................24200.0510000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA---GCAGCAGCAGC------------A---------------------------------------------------------GCA...........................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------------------------------CACA---GCAGCAGCAGC------------A---------------------------------------------------------GC............................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................TGC----AGCA---GCAGC------------AGCAGCAG-----C----------AAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
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AGCAACAGCAGCAGCATCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................AACAAC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCAGCAG---.........................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................AC-------------------------------------------------------------------------------------------------------AAC---------------------------------------------AACAACA-----------------GCA-------GCA................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................CAGCAGCAACACCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------------------------------CACA---GCAGCAGCAGC------------A---------------------------------------------------------GCA...........................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
droSim2
AGCAGCATCAACAGCAGCAACAC---CAACAGCACCTACAGCAACACC---AT---------C--A-A-------------------------------------------------------GCGCACCATCAGCAT--------------G---------TCC---------TGC----AGCA---GCAAC------------AGCAGCAG-----C----------AACAGCAG------------------------------------CACTCC--------------CAGCATCAGCATCAGCAGCAACATCACGGCCACCCACTGCATCCGCATCATA---------------CACACC------------------------------------A------------------------------------------------------------------------------------GCAGC---A----------------------------------------------------------------------------------------GCAACAA---------CAGCAGCAGCCG---CCGC------AACACCACCAG----------------CAGCAGCAACAGCAGC------------------ACG----------------------------------------------------CACA---GCAGCAGCAGC------------A------------------------------------------------------------GCATCA--------------------------------TGCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAG----------------CAGCAGCAACAGCA.................................................................................................................................................................................................................2121.50300000300000000000
............................................................................................................................................................................................................................................................................................................................................................................CC------------------------------------A------------------------------------------------------------------------------------GCAGC---A----------------------------------------------------------------------------------------GCAACAA---------CAGCA..............................................................................................................................................................................................................................................................................21131.1515000015000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------CAGCAGCAACAGCAGC------------------.............................................................................................................................................................................................18200.05100100000000000000
droSec2
AGCAGCAGCAGCACCAGCCACAT---CAGCAGCAGCAGCAGCAGCAAC---AA---------G--C-G----------------------TT---GCATCTGC---------------------------------------------------------------------------------AGCA---GC---------AG---CAA--------C----------AGCAACAA------CATTCCA---GTAACATG-----------------------------------------GCACAAAAACGTGATCGTGATCGTGATCT--CTCAACGTCA-----------------------------------------------------------------------------------------------------------------------------------------AATGGCAACGGCAACAGC----AGCAACACCAACAACATCAACAACAACAA------------C------------AC---CTCCCTGGACCCAACA----------------------------------------------------------G----------------CAACATCC-----AGC---------------------------------------------------------AACTGCAGCT----CAAGCA---GCAGCAACAAC------------A---------------------------------------------------------GCGC-------------------------------------TGCCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA------------C------------AC---CTCCCTGGACCCAAC...........................................................................................................................................................................................................................................................................................................2611.0011000
...............AGCCACAT---CAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.8351031
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCAACGGCAACAGC----AGC..................................................................................................................................................................................................................................................................................................................................................................................2120.5010001
..............CAGCCACAT---CAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.3321001
................GCCACAT---CAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGCAACAGC----AGCAACA..............................................................................................................................................................................................................................................................................................................................................................................2070.1410010
........................................................................................................................................................................................AGCA---GC---------AG---CAA--------C----------AGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
droYak3
AGCAGCAGCAACAACAGCAGCAA---CAGCAGCAACACCAGCAGCAAC---AT---------C--A-G----------------------------CAGCAATAC------------------C------A-----------------------------------------GC-------------A--------------------------G-------------CAA------------------------------------------CACTAT--------------CAGCAAC---------------------------------------ATTATCAGCAGCAGCAGCACTTGTACC------------------------------------AGCATC------------------ATCCCAGCCTGGCGC---TGCCTGGTAGTTTGCCACCCGCTGTCGAGGTGGTGGAGTTGCAACTGCAGCAAC----A---------------------------------------------------------------------------------GCAGCAT---------CAGCA-------GCA--GCAGCAGCAACATCTGCAG----------------C---A-CAACAACAG----------------------------------------------------------------------------CA---GTAGCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------CCCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---A-CAACAACAG----------------------------------------------------------------------------CA---GTAGCAGC.......................................................................................................................2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--GCAGCAGCAACATCTGCA................................................................................................................................................................................................................................................20110.55605000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GCAGCAGCAACATCTGCA................................................................................................................................................................................................................................................19110.27302000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG----------------------------------------------------------------------------CA---GTAGCAGCAGC------------........................................................................................................2140.25101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC----A---------------------------------------------------------------------------------GCAGCAT---------CAGCA-------GCA--GCA...............................................................................................................................................................................................................................................................23120.08100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--GCAGCAGCAACATCTGC.................................................................................................................................................................................................................................................19130.08101000000000
.........AACAACAGCAGCAA---CAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
..........ACAACAGCAGCAA---CAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
......................................CAGCAGCAAC---AT---------C--A-G----------------------------CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05110000000000
....GCAGCAACAACAGCAGCAA---CAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
........CAACAACAGCAGCAA---CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------GCAGCAT---------CAGCA-------GCA--GCAGC.............................................................................................................................................................................................................................................................21200.05100010000000
AGCAGCAGCAACAACAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC----A---------------------------------------------------------------------------------GCAGCAT---------CAGCA-------.......................................................................................................................................................................................................................................................................18200.05101000000000
AGCAGCAGCAACAACAGCAGCAA---CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
.........AACAACAGCAGCAA---CAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEre2
AGCAGCAGCAGCAACAGCAGCAG---CAGCAGCAGCAACACCAGCAGCAGCAT---------C--A-G----------------------------CAGCAAT---AC---------------C------A------------------------------------------------------------GCA--------------------G-------------CAA------------------------------------------CACTAT--------------CAGCAAC---------------------------------------ATTATCAGCAGC---AGCACTTGTACC------------------------------------AGCATC------------------ATCCCAGCCTGGCGC---TGCCTGG---CTTGCCACCCGCTGTCGAGGTGGTGGAGTTGCAACTGCAGCAGC----A---------------------------------------------------------------------------------GCAACAT---------CAGCA-------GCA--GCAGCAGCAGCATCTGCAG----------------C---------------------------------A----------------------------------------------------C-AACA---ACAGCAGCAGC------------A---------------------------------------------------------GCAGC-------------------------------------CCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC----A---------------------------------------------------------------------------------GCAACAT---------CAGCA-------.......................................................................................................................................................................................................................................................................19200.1022000000
.......................................ACCAGCAGCAGCAT---------C--A-G----------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000010
.....................AG---CAGCAGCAGCAACACCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.1010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------CAGCA-------GCA--GCAGCAGCAGCA......................................................................................................................................................................................................................................................21200.0511000000
AGCAGCAGCAGCAACAGCAGCAG---CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----A---------------------------------------------------------------------------------GCAACAT---------CAGCA-------GCA--GCAG..............................................................................................................................................................................................................................................................21200.0510000010
...............AGCAGCAG---CAGCAGCAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510001000
................GCAGCAG---CAGCAGCAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
...................GCAG---CAGCAGCAGCAACACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC----A---------------------------------------------------------------------------------GCAACAT---------CAGC...............................................................................................................................................................................................................................................................................20200.0510000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAT---------CAGCA-------GCA--GCAG..............................................................................................................................................................................................................................................................18200.0511000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC----A---------------------------------------------------------------------------------GCAACAT---------CAGCA-------.......................................................................................................................................................................................................................................................................21200.0511000000
.........AGCAACAGCAGCAG---CAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------CAGCA-------GCA--GCAGCAGCAGC.......................................................................................................................................................................................................................................................21200.0510100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---ACAGCAGCAGC------------A---------------------------------------------------------GCA...........................................19200.0510000100
...........................................GCAGCAGCAT---------C--A-G----------------------------CAGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010

Generated: 05/18/2015 at 12:22 AM