ID:

dps_1274

 Coordinate:

3:17255103-17255253 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.1 -13.9

Flybase annnotation

CDS [Dpse\GA25082-cds]; exon [dpse_GLEANR_16300:2]; intron [Dpse\GA25082-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTATCAGTTTGCATACATATAGATATACGCTCATATCAGAATTTGGGGAAATTAAATTGGATGATGAAATTTGTTACGCAAAGATATGGGTGTGAACTTTGTCTGGATGCCACCTCAGACAGGGACTATCAATCAACTTTGGAGGATTGCGTGTCCCGTGGGTCATTGTTAATAGGTATAATTTATTCTGCTTTCAACAGAAAATAAATGCGGCAATGTCATCTCACCGATGCACGACATTCCATTGTAC
*********************************************************************************************....((((((((((........)))))))))).....(((((..........)))))..*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 SRR902012
CNS imaginal disc
 GSM343916
embryo
 GSM444067
head
............................................................................................................................................................................................................................CATCTCACCGATGCACGAC............ 19 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................................ATCAACTTTGGAGGATTGCG................................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0
..................................................................................................................................................................................................................GCGGCAATGTCATCTCACCGA.................... 21 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................................................................AAATGCGGCAATGTCATCTCACC...................... 23 0 1 2.00 2 2 0 0 0 0 0
..........................................................................................................................................................................................................................GTCATCTCACCGATGCACGAC............ 21 0 1 2.00 2 2 0 0 0 0 0
...............................................................................................................................................................................................................................CTCACCGATGCACGACATTCC....... 21 0 1 2.00 2 2 0 0 0 0 0
................................................................................................................................................................................................................ATGCGGCAATGTCATCTCACCGAT................... 24 0 1 2.00 2 1 0 0 1 0 0
............................................................................................................................................................................................................................CATCTCACCGATGCACGACATTCCAT..... 26 0 1 2.00 2 1 0 1 0 0 0
.............................................................................................TGAACTTTGTCTGGATGCC........................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................GATATGGGTGTGAACTTTGT.................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................TATAATTTATTCTGCTTTTA...................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................TTAATGTCATCTCACCGATGC................. 21 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................AATAAATGCGGCAATGTCA............................. 19 0 1 1.00 1 0 0 0 0 0 1
...........................................................................................................................................................................................................AATAAATGCGGCAATGTCATCTCACC...................... 26 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GGCAATGTCATCTCACCGA.................... 19 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................CACCGATGCACGACATTCCATT.... 22 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................CAACTTTGGAGGATTGCGT.................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................AAAAATAAATGCGGCAATGTCAT............................ 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................TCATCTCACCGATGCACGAC............ 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGTGAACTTTGTCTGGATG............................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
....................................................TTAAATTGGATGATGAAATTT.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................TCAACTTTGGAGGATTGCGT.................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GTCATCTCACCGATGCACGACATT......... 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................ATGCGGCAATGTCATATCAC....................... 20 1 1 1.00 1 0 0 0 0 1 0
...................................................................................................................................................................................................................CGGCAATGTCATCTCACCGATGCAC............... 25 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................AATGCGGCAATGTCATCTCACCGA.................... 24 0 1 1.00 1 1 0 0 0 0 0
.......................................................AATTGGATGATGAAATTTGTT............................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................TGCGGCAATGTCATCTCACC...................... 20 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................TTCACGACATTCCATTGTAC 20 1 1 1.00 1 0 0 1 0 0 0
......................................................................................ATGGGTGTGAGCTTTGTCTGG................................................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................AATGCGGCAATGTCATCTCACCGATGCA................ 28 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................ATAAATGCGGCAATGTCATCTCACCGA.................... 27 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................AAATGCGGCAATGTCATCTCACCGAT................... 26 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................TCTCACCGATGCACGACATTCC....... 22 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................ATCTCACCGATGCACGACATTCCATTGT.. 28 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................CACCGATGCACGACATTCCA...... 20 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................CAAAAATAAATGCGGCAATGTCAT............................ 24 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................TGCGGCAATGTCATCTCACCGATG.................. 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................ATGCGGCAATGTCATCTCACCGA.................... 23 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................CTCACCGATGCACGACATTC........ 20 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................GGATGCCACCTCAGACAGG............................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................TGACTATCAATCAACTTTGGAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GTCATCTCACCGATGCACG.............. 19 0 1 1.00 1 1 0 0 0 0 0
........................................................................TGTTACGCAAAGATATGGGTG.............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................AAAAATAAATGCGGCAATGT............................... 20 1 1 1.00 1 1 0 0 0 0 0
........................................................................................................TGGATGCCACCTCAGACAGGGTT............................................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GTCATCTCACCGATGCACGA............. 20 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................ATGCGGCAATGTCATCTCACC...................... 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................GGTGTGAACTTTGTCTGGATG............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................CTCACCGATGCACGACATTCCATT.... 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................AAAATAAATGCGGCAATGTC.............................. 20 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................ATCTCACCGATGCACGACATT......... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................AGACATGCGTGTGAATTTTGT.................................................................................................................................................... 21 3 7 0.57 4 3 1 0 0 0 0
..................................................................................AGACATGCGTGTGAATTTTG..................................................................................................................................................... 20 3 15 0.13 2 2 0 0 0 0 0
...................................................ATTAAATTGGATGAGGAAGAT................................................................................................................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0
.......................................................................................................................................................................................................CAAAAATAAATGCGGCAAT................................. 19 2 12 0.08 1 1 0 0 0 0 0
.....................................................................ATTTGTTACGGAAAGACGT................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GAATAGTCAAACGTATGTATATCTATATGCGAGTATAGTCTTAAACCCCTTTAATTTAACCTACTACTTTAAACAATGCGTTTCTATACCCACACTTGAAACAGACCTACGGTGGAGTCTGTCCCTGATAGTTAGTTGAAACCTCCTAACGCACAGGGCACCCAGTAACAATTATCCATATTAAATAAGACGAAAGTTGTCTTTTATTTACGCCGTTACAGTAGAGTGGCTACGTGCTGTAAGGTAACATG
***************************************************************************************************....((((((((((........)))))))))).....(((((..........)))))..********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
.......................................................................................................................TGTCCCTGATAGTTAGTTGAA............................................................................................................... 21 0 1 1.00 1 1 0 0
.................................................................................................GAAACAGACCTACGGTGGAGT..................................................................................................................................... 21 0 1 1.00 1 0 1 0
.....................................................................................................................TCTGTCCCTGATAGTTAGTTG................................................................................................................. 21 0 1 1.00 1 1 0 0
............................................................................................................................................................................................................................GTAGAGTGGCTACGTGCTGTG.......... 21 1 1 1.00 1 1 0 0
.....................................................................................ATACCCACACTTGAAACAGAC................................................................................................................................................. 21 0 1 1.00 1 1 0 0
..............................................................................................................................................................................................................................AGAGTGGCTACGTGCTGTAA......... 20 0 1 1.00 1 1 0 0
.....................................................................................................................TCTGTCCCTGATAGTTAGT................................................................................................................... 19 0 1 1.00 1 1 0 0
.................................................................................................................GGAGTCTGTCCCTGATAGTTA..................................................................................................................... 21 0 1 1.00 1 1 0 0
.......CAAACGTATGTATTTCCATA................................................................................................................................................................................................................................ 20 2 5 0.20 1 0 0 1
.............................................TCACTTTAATTTAACCTACTACTTC..................................................................................................................................................................................... 25 3 10 0.10 1 0 0 1
............................................................................TGCGCTTCTATACACACAG............................................................................................................................................................ 19 3 20 0.05 1 1 0 0
...................................................................................CTGTACGCACACTTAAAACA.................................................................................................................................................... 20 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:17255053-17255303 + dps_1274 CTTATCAGTTTGCAT---ACATATAGATATACGCTCATATC---AGAAT---------------TTGGGGAAATTAAATTGGATGA--------------------TGAAATTTGTTACGCAAA--GA----T--------ATGG-----GTGTGAACTTTGTCTGGATGCCACCTCAGA----------CAGGGAC---TATCAATCAACTTTGGAGGATTGCGTGTCCCGTGGGTCATT------GTTAAT-----AGGTAT-----------------------AAT---TTATT-CTGCTTTCAACAGAAAATAAATGCGGCAATGTCATCTCACCGATGCACGACATTCCATTGTAC
droPer2 scaffold_31:534995-535245 - CTTATCAGTTTGCAT---ACATATAGATATACGCTCATATC---AGAAT---------------TTGGGGAAATTAAATTGGATGA--------------------TGAAATTTGTTACGCAAA--GA----T--------ATGG-----GTGTGAACTTTGTCTGGATGCCACCTCAGA----------CAGGGAC---TATCAATCAACTTTGGAGGATTGCGTGTCCCGTGGGTCATT------GTTAAT-----AGGTAT-----------------------AAT---TTATT-CTGCTTTTAACAGAAAATAAATGCGGCAATGTCATCTCACCGATGCACGACATTCCATTGTAC
droWil2 scf2_1100000004512:2065802-2065870 - TTCTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTGCAACAGAGAATAAGTGCGGTAATGTCATTTCGCCAATGCACGACATTCCATTGTAT
droVir3 scaffold_12875:14715246-14715330 + ACTGCTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTATTTGA-AT---------------------------------------------------ATTATTTGCTGTAGAAAACAACTGCGGCAATGTCATTTCACCCATGCACGACATTCCATTGTAC
droMoj3 scaffold_6496:10188092-10188169 + TATATCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCCT-CTTTCATCCATAGAAAACAACTGCGGCAATGTCATTTCGCCAATGCACGATATTCCGTTATAC
droGri2 scaffold_15245:14723244-14723353 + ATTA-----------------------------------------------------ATCAA-ATTGG--------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGTGTTAA-GTT-------A----ATTAAA-----ACGCTT-----------------------CATAATTTCTGGTG------TCTAGAAAACAACTGCGGCAATGTCATTTCACCAATGCACGACATTCCACTGTTC
droAna3 scaffold_13266:15997559-15997811 - CTTATCACC--CAAA---ACATATAGC------------TT---CAATAAAGCTGATATCGGATTCGGG--------------GTGCAGAAATTCAATTTGTA---------TTGCCG-GCCA---AA--------------CGGGGGCCTTGCGACCTTTGTCTAGACGGCGAAA---------T--TTCCAGCAC---TATCAATCAA---------ATCGCGTGTCCA-GG-ATCATT------A---------------TAATTTACGAGTCCGACTTTTTC-CATTATTTCTG-CCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCCCTCTAC
droBip1 scf7180000396567:484173-484425 - CTTATCAGC--CAAA---ACATATAGC------------TT---CAATAAAGCTGATATCGGATACGGG--------------GTGCAAAAATTCAACTTTAT----------TGGCCGGCCA---AA--------------CGGGGGGCCTGCGACCTTTGTCTAGACGCCGGAA---------T--TTCCAGCAC---TATCAATCAA---------ATCGCGTGTCCA-GG-ATCATT------A---------------TAATTTACGAGTGCGACTTTTTC-TATCATTTCTA-CCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCTCCGATGCACGACATTCCCCTCTAC
droKik1 scf7180000302277:723049-723298 + CTTATCTGC--GCTATAA---TATAGC------------CT---CCATATCGTTGGTATCGAGATTGGG--------------GT-------------------AATCAGGTTCGGCACGCAAGTAATTAGACCCGGCCGGCCGG----CCGCTGACCTTTGTCTAGACAACTAAG---AAAGACCCTTTACAATCG---CATCAATCAA---------ATCGCGTGCCCC-GC-AGCGCTAAT-AT-------------TTGC-----------------------AATAATTTCTGGCC-TTTTCCGCAGAAAATAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droFic1 scf7180000453342:299705-299944 - TTTATTGC----------------GGC------------TT---CCATAGAGCAGATATCGAATTAAG---------------GGGCAGAATTTCGGTT-GGCCAATCAAGACGGGCACGCGAG--CC--------------CAG-----AAGTGACCTTTGTCTAGACGACAGGC---------C--GACA-GCATTTTAATCAATCAA---------ATCGCGTGTTGCAGGTGCCA----T-ATATCAAC-----AAAAGT-----------------------AATCATTTCTGGACACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droEle1 scf7180000491214:4544668-4544884 + TT-A-------------------TAGC------------TT---CCATATAGCTGATATCGTAATTGGG--------------GGGCCAAAATTCAGTA-GAC----------CAATCAAGAA---AT----------------------TTGTGACCTTTGTCTAGACCATA--------------------GCAC---TATCAATCAA---------ATGGCGTGCCCCAGCTGTCATCTAT-ATATCAATTG--T--AACT-----------------------ACTAATTTCTGGCCACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCATTGTAT
droRho1 scf7180000776849:140288-140534 - CTTATCTTT--GT-TTAT---TATAGC------------TT---CCATATAGCAGATATCAA-ATTGG---------------GGGCCAAGTTTCAGTA-TACCAATCAAGATTGGCACGCTAA--AT----------------------TTGTGACCTTTGTCTAGACGACTGGG---------T--TTCGAGTAC---TATCAATCAA---------CTCGCGTGTACCAAGTGTCATCTAT-ATATCATTT------CTCT-----------------------ACTAATTTCTGGCCACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droBia1 scf7180000301754:3459823-3460044 + CTTATCT--TAGCGCTAC-------------------TAT-----TATAGGGAAGATATCGAAATTGG---------------GGGCCAAGTTCC--------------------GCACGCAAG--AT----------------------TGGCGACCTTTGCCTGGGCGACTGGG---------C--TTCCAGCTC---TATCAATCAA---------ATCGCGTGTCCC-GGCGTCGTCTGTGGTGTCAACT------ATAT-----------------------AATCATTTC-GACT-ATATCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droTak1 scf7180000414175:75689-75919 + CTTATCTCTTGGCTATAT---TAT---TCTATCCACATAGCAAACTATATAGCAGATATCGAATTGGC---------------TGGTCAAATTTCACTT-A-------------------------AT----------------------TGGTGACCTTTG---------------------------------AC---CATCAATCAA---------ATCGCGTGTCCA-GGTGTCATCTGA-ATATCAACTGAATAACACTAATTT-------------CTGCTACTAATTTCTAAT--TTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droEug1 scf7180000409464:813382-813619 - TTTATTA-------------------------TCCCATAGT---CCATATGACAGATATCGGAATTGG---------------TGGTCGAATTTCAGTT-GACCAATTAAGATAGGCACGCAAA--AT----------------------TTGTGACCTTTGTCTAGACGACAGAA---------T--TTCCAGCAC---TATCAATCAA---------TTCGCGTGTCCC-GGTGTCATCTAT-ATATCAT--------CAGT-----------------------AATCATTTCTGGCCACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCATTGTAC
dm3 chr2R:20447884-20448123 - CTTATCTCTTTCCTTTAT------------TAGCCCATATT---CCGAATAGCAGATATCGAAACTGG---------------TGGCTGAATTTCGGTT-TAC----------TGGCACGCAA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--CCCGGTCAC---TATTAATCAA---------ATCGCGTGTCCA-GGTGTCGCCCAT-ATATCAG--------GCAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droSim2 2r:20927844-20928083 - dsi_9967 CTTATCTCTTGCCTTTAT------------TAGCCCATATT---CCAAATAGCAGATATCGAAACTGG---------------TGGCTGAATTTCGGTT-TAC----------TGGCACGCGA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--CCCGGTCAC---TATCAATCAA---------ATCGCGTGTCCA-GGTGTTGCCCAT-ATATCAG--------ATAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droSec2 scaffold_23:321658-321881 - CTT------------TAT------------TAGCCCATA-------ATATAGCAGATATCGAAACTGG---------------TGGCTGAATTTCGGTT-TAC----------TGGCACGCGA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--CCCGGTCAC---TATCAATCAA---------ATCGCGTGTCCA-GGTGTCGCCCAT-ATATCAG--------ACAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droYak3 2R:20417486-20417714 - CTTATCTCTTAGCTTTAT------------TGGTTCATATT---CGAAATAGAAGATATCGGACCTGG---------------TGTCCAAACTTCGGTT-TAT----------TGACACGCGA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--TCCAGTCAC---TATCAATCAA---------ATCGCGTGCCC------------AT-ATATCAG--------ACTT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC
droEre2 scaffold_4845:21819814-21820053 - CTTATCTCTTAGCTTTAT------------TGGCCAATATT---CCAAATAGCAGATATCGAAACTGG---------------TGGCCAAACTTCGGAT-TAC----------TGGCACGCGA---GC----------------------TAGTGACCTTTGTCTAGCCGTCAGGT---------C--TCCGGTCAC---TATTAATCAA---------ATCGCGTGTCCA-GGTGTCGCCTAT-ATATCAA--------AAAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTTATCAGTTTGCAT---ACATATAGATATACGCTCATATC---AGAAT---------------TTGGGGAAATTAAATTGGATGA--------------------TGAAATTTGTTACGCAAA--GA----T--------ATGG-----GTGTGAACTTTGTCTGGATGCCACCTCAGA----------CAGGGAC---TATCAATCAACTTTGGAGGATTGCGTGTCCCGTGGGTCATT------GTTAAT-----AGGTAT-----------------------AAT---TTATT-CTGCTTTCAACAGAAAATAAATGCGGCAATGTCATCTCACCGATGCACGACATTCCATTGTACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................CATCTCACCGATGCACGAC............1912.0020200000000
.............................................................................................................................................................................................................ATCAACTTTGGAGGATTGCG.........................................................................................................................................2012.0020000002000
.................................................................................................................................................................................................................................................................................................................................GCGGCAATGTCATCTCACCGA....................2112.0020200000000
.............................................................................................................................................................................................................................................................................................................................AAATGCGGCAATGTCATCTCACC......................2312.0020200000000
.........................................................................................................................................................................................................................................................................................................................................GTCATCTCACCGATGCACGAC............2112.0020200000000
..............................................................................................................................................................................................................................................................................................................................................CTCACCGATGCACGACATTCC.......2112.0020200000000
...............................................................................................................................................................................................................................................................................................................................ATGCGGCAATGTCATCTCACCGAT...................2412.0020100000001
...........................................................................................................................................................................................................................................................................................................................................CATCTCACCGATGCACGACATTCCAT.....2612.0020110000000
.........................................................................................................................................................TGAACTTTGTCTGGATGCC..............................................................................................................................................................................................1911.0010100000000
..............................................................................................................................GA----T--------ATGG-----GTGTGAACTTTGT.......................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................AATAAATGCGGCAATGTCA.............................1911.0010000010000
..........................................................................................................................................................................................................................................................................................................................AATAAATGCGGCAATGTCATCTCACC......................2611.0010100000000
...................................................................................................................................................................................................................................................................................................................................GGCAATGTCATCTCACCGA....................1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................CACCGATGCACGACATTCCATT....2211.0010100000000
...............................................................................................................................................................................................................CAACTTTGGAGGATTGCGT........................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................TCATCTCACCGATGCACGAC............2011.0010100000000
.......................................................................................................................................................TGTGAACTTTGTCTGGATG................................................................................................................................................................................................1911.0010100000000
.........................................................................TTAAATTGGATGA--------------------TGAAATTT........................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................TCAACTTTGGAGGATTGCGT........................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................GTCATCTCACCGATGCACGACATT.........2411.0010100000000
..................................................................................................................................................................................................................................................................................................................................CGGCAATGTCATCTCACCGATGCAC...............2511.0010100000000
..............................................................................................................................................................................................................................................................................................................................AATGCGGCAATGTCATCTCACCGA....................2411.0010100000000
............................................................................AATTGGATGA--------------------TGAAATTTGTT.....................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................TGCGGCAATGTCATCTCACC......................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................AATGCGGCAATGTCATCTCACCGATGCA................2811.0010100000000
...........................................................................................................................................................................................................................................................................................................................ATAAATGCGGCAATGTCATCTCACCGA....................2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................AAATGCGGCAATGTCATCTCACCGAT...................2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................TCTCACCGATGCACGACATTCC.......2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................ATCTCACCGATGCACGACATTCCATTGT..2811.0010100000000
................................................................................................................................................................................................................................................................................................................................................CACCGATGCACGACATTCCA......2011.0010100000000
................................................................................................................................................................................................................................................................................................................................TGCGGCAATGTCATCTCACCGATG..................2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................ATGCGGCAATGTCATCTCACCGA....................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................CTCACCGATGCACGACATTC........2011.0010000001000
.....................................................................................................................................................................GGATGCCACCTCAGA----------CAGG........................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................GTCATCTCACCGATGCACG..............1911.0010100000000
.................................................................................................................TGTTACGCAAA--GA----T--------ATGG-----GTG.................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................TGGATGCCACCTCAGA----------CAGGGTT---..................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................GTCATCTCACCGATGCACGA.............2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................ATGCGGCAATGTCATCTCACC......................2111.0010100000000
................................................................................................................................................G-----GTGTGAACTTTGTCTGGATG................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................CTCACCGATGCACGACATTCCATT....2411.0010100000000
........................................................................................................................................................................................................................................................................................................................AAAATAAATGCGGCAATGTC..............................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................ATCTCACCGATGCACGACATT.........2111.0010100000000
droPer2
CTTATCAGTTTGCAT---ACATATAGATATACGCTCATATC---AGAAT---------------TTGGGGAAATTAAATTGGATGA--------------------TGAAATTTGTTACGCAAA--GA----T--------ATGG-----GTGTGAACTTTGTCTGGATGCCACCTCAGA----------CAGGGAC---TATCAATCAACTTTGGAGGATTGCGTGTCCCGTGGGTCATT------GTTAAT-----AGGTAT-----------------------AAT---TTATT-CTGCTTTTAACAGAAAATAAATGCGGCAATGTCATCTCACCGATGCACGACATTCCATTGTACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................GTTACGCAAA--GA----T--------ATGG-----GTGT................................................................................................................................................................................................................2112.002000002
..............................................................................................................................................................................................................................................................................................................................................CTCACCGATGCACGACATTCC.......2111.001001000
.................................................................................................................................................................................................................................................................................................................................GCGGCAATGTCATCTCACC......................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................CTCACCGATGCACGACATTCCATTG...2511.001010000
..........................................................................................................................................................................................................................................................................................................................AATAAATGCGGCAATGTCATCTCACC......................2611.001100000
.............................................................................................................................................................................................................................................................................................................................AAATGCGGCAATGTCATCTC.........................2011.001010000
..............................................................................................................................................................................................................................................................................................................................................CTCACCGATGCACGACATTCCATT....2411.001001000
...............................................................................................................................................................................................................................................................................................................................ATGCGGCAATGTCATCTCACCGA....................2311.001001000
............................................................................................................................................................................................................................................................................................................................................ATCTCACCGATGCACGACATTCCATT....2611.001010000
.........................................................................................................................................................................................................................................................................................................................AAATAAATGCGGCAATGT...............................1811.001001000
droWil2
TTCTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTGCAACAGAGAATAAGTGCGGTAATGTCATTTCGCCAATGCACGACATTCCATTGTATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................AATAAGTGCGGTAATGTCA.............................1911.00100100
...........................................................................................................................................................................................................................................................................................................................ATAAGTGCGGTAATGTCATTTCGC.......................2411.00100010
.........................................................................................................................................................................................................................................................................................................................GAATAAGTGCGGTAATGT...............................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................ATGTCATTTCGCCAATGCACGACATTCC.......2811.00101000
droVir3
ACTGCTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTATTTGA-AT---------------------------------------------------ATTATTTGCTGTAGAAAACAACTGCGGCAATGTCATTTCACCCATGCACGACATTCCATTGTACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................TGCGGCAATGTCATTTCACCCA....................2211.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AACTGCGGCAATGTCATTTCACC......................2311.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................AACAACTGCGGCAATGTCATTTCACCC.....................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAACAACTGCGGCAATGTC..............................1911.001000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CATTTCACCCATGCACGACA...........2011.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAACAACTGCGGCAATGT...............................1811.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATTATTTGCTGTAGAAAACA............................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TATATCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCCT-CTTTCATCCATAGAAAACAACTGCGGCAATGTCATTTCGCCAATGCACGATATTCCGTTATACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................CATTTCGCCAATGCACGATATTCCGTT....2711.001100000
............................................................................................................................................................................................................................................................................................................................CAACTGCGGCAATGTCATTTC.........................2111.001000010
droGri2
ATTA-----------------------------------------------------ATCAA-ATTGG--------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGTGTTAA-GTT-------A----ATTAAA-----ACGCTT-----------------------CATAATTTCTGGTG------TCTAGAAAACAACTGCGGCAATGTCATTTCACCAATGCACGACATTCCACTGTTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CTTATCACC--CAAA---ACATATAGC------------TT---CAATAAAGCTGATATCGGATTCGGG--------------GTGCAGAAATTCAATTTGTA---------TTGCCG-GCCA---AA--------------CGGGGGCCTTGCGACCTTTGTCTAGACGGCGAAA---------T--TTCCAGCAC---TATCAATCAA---------ATCGCGTGTCCA-GG-ATCATT------A---------------TAATTTACGAGTCCGACTTTTTC-CATTATTTCTG-CCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCCCTCTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................CAAGTGCGGCAATGTCATCT..........................2012.002020000
........................................................................................................................................................GCGACCTTTGTCTAGACGGC..............................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................AAGTGCGGCAATGTCATCTCGCC......................2311.001010000
......................................................GATATCGGATTCGGG--------------GTGCAGA................................................................................................................................................................................................................................................................................2211.001000010
.........................................................................................................................................................................................................................................................................................................................AAACAAGTGCGGCAATGTCA.............................2011.001100000
................................................................................................................................................................................................................................................................................................................................................CGCCGATGCACGACATTCCCCT....2211.001010000
.............................................................................................................................................................................................................................................................................................................................AAGTGCGGCAATGTCATCT..........................1911.001010000
..............................................................................................................................................................................................................................................................................................................................AGTGCGGCAATGTCATCTCGCC......................2211.001010000
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCATCTCGCC......................2611.001000010
...........................................................................................................................................................................................................................................................................................................................................CATCTCGCCGATGCACGAC............1911.001100000
droBip1
CTTATCAGC--CAAA---ACATATAGC------------TT---CAATAAAGCTGATATCGGATACGGG--------------GTGCAAAAATTCAACTTTAT----------TGGCCGGCCA---AA--------------CGGGGGGCCTGCGACCTTTGTCTAGACGCCGGAA---------T--TTCCAGCAC---TATCAATCAA---------ATCGCGTGTCCA-GG-ATCATT------A---------------TAATTTACGAGTGCGACTTTTTC-TATCATTTCTA-CCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCTCCGATGCACGACATTCCCCTCTACSizeHit CountTotal NormTotal
No Reads
droKik1
CTTATCTGC--GCTATAA---TATAGC------------CT---CCATATCGTTGGTATCGAGATTGGG--------------GT-------------------AATCAGGTTCGGCACGCAAGTAATTAGACCCGGCCGGCCGG----CCGCTGACCTTTGTCTAGACAACTAAG---AAAGACCCTTTACAATCG---CATCAATCAA---------ATCGCGTGCCCC-GC-AGCGCTAAT-AT-------------TTGC-----------------------AATAATTTCTGGCC-TTTTCCGCAGAAAATAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotal
No Reads
droFic1
TTTATTGC----------------GGC------------TT---CCATAGAGCAGATATCGAATTAAG---------------GGGCAGAATTTCGGTT-GGCCAATCAAGACGGGCACGCGAG--CC--------------CAG-----AAGTGACCTTTGTCTAGACGACAGGC---------C--GACA-GCATTTTAATCAATCAA---------ATCGCGTGTTGCAGGTGCCA----T-ATATCAAC-----AAAAGT-----------------------AATCATTTCTGGACACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotal
No Reads
droEle1
TT-A-------------------TAGC------------TT---CCATATAGCTGATATCGTAATTGGG--------------GGGCCAAAATTCAGTA-GAC----------CAATCAAGAA---AT----------------------TTGTGACCTTTGTCTAGACCATA--------------------GCAC---TATCAATCAA---------ATGGCGTGCCCCAGCTGTCATCTAT-ATATCAATTG--T--AACT-----------------------ACTAATTTCTGGCCACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCATTGTATSizeHit CountTotal NormTotal
No Reads
droRho1
CTTATCTTT--GT-TTAT---TATAGC------------TT---CCATATAGCAGATATCAA-ATTGG---------------GGGCCAAGTTTCAGTA-TACCAATCAAGATTGGCACGCTAA--AT----------------------TTGTGACCTTTGTCTAGACGACTGGG---------T--TTCGAGTAC---TATCAATCAA---------CTCGCGTGTACCAAGTGTCATCTAT-ATATCATTT------CTCT-----------------------ACTAATTTCTGGCCACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotal
No Reads
droBia1
CTTATCT--TAGCGCTAC-------------------TAT-----TATAGGGAAGATATCGAAATTGG---------------GGGCCAAGTTCC--------------------GCACGCAAG--AT----------------------TGGCGACCTTTGCCTGGGCGACTGGG---------C--TTCCAGCTC---TATCAATCAA---------ATCGCGTGTCCC-GGCGTCGTCTGTGGTGTCAACT------ATAT-----------------------AATCATTTC-GACT-ATATCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotal
No Reads
droTak1
CTTATCTCTTGGCTATAT---TAT---TCTATCCACATAGCAAACTATATAGCAGATATCGAATTGGC---------------TGGTCAAATTTCACTT-A-------------------------AT----------------------TGGTGACCTTTG---------------------------------AC---CATCAATCAA---------ATCGCGTGTCCA-GGTGTCATCTGA-ATATCAACTGAATAACACTAATTT-------------CTGCTACTAATTTCTAAT--TTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotal
No Reads
droEug1
TTTATTA-------------------------TCCCATAGT---CCATATGACAGATATCGGAATTGG---------------TGGTCGAATTTCAGTT-GACCAATTAAGATAGGCACGCAAA--AT----------------------TTGTGACCTTTGTCTAGACGACAGAA---------T--TTCCAGCAC---TATCAATCAA---------TTCGCGTGTCCC-GGTGTCATCTAT-ATATCAT--------CAGT-----------------------AATCATTTCTGGCCACTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCATTGTACSizeHit CountTotal NormTotal
No Reads
dm3
CTTATCTCTTTCCTTTAT------------TAGCCCATATT---CCGAATAGCAGATATCGAAACTGG---------------TGGCTGAATTTCGGTT-TAC----------TGGCACGCAA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--CCCGGTCAC---TATTAATCAA---------ATCGCGTGTCCA-GGTGTCGCCCAT-ATATCAG--------GCAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................ACAAGTGCGGCAATGTCATCT..........................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TGGCCATTCTCCACAGAAAA..............................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CTGG---------------TGGCTGAATTTCGGTT-......................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCCGATGCACGACATTCCACTGTAC2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CAAGTGCGGCAATGTCATCTCGCC......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AAGTGCGGCAATGTCATCTCG........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................AAAACAAGTGCGGCAATGTCATCT..........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................AA---------ATCGCGTGTCCA-GGTGT.............................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AA---------ATCGCGTGTCCA-GGTGTCG...........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................AGCAGATATCGAAACTGG---------------TGGCTGA................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTAATCAA---------ATCGCGTGTCCA-GGTGT.............................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................CAGATATCGAAACTGG---------------TGGCT..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CATCTCGCCGATGCACGACAT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................A-GGTGTCGCCCAT-ATATCAG--------G.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTTTAT------------TAGCCCATATT---CCG...........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CAATGTCATCTCGCCGATGCACGA.............2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AGCAGATATCGAAACTGG---------------TGG....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGTCGCCCAT-ATATCAG--------GCAT-----------------------AATA.......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................T-ATATCAG--------GCAT-----------------------AATAATTTCTGGC..............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCGCGTGTCCA-GGTGTCGCC.........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GGCAATGTCATCTCGCCGATGC.................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AGTGCGGCAATGTCATCTCGCCGA....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AAGTGCGGCAATGTCATCT..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TCAA---------ATCGCGTGTCCA-GGTGT.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................AAAACAAGTGCGGCAATGTCATCTC.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TCTCGCCGATGCACGACATTCCACTG...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CTCGCCGATGCACGACATTCCACTGTA.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AAAACAAGTGCGGCAATGTCAT............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AATGTCATCTCGCCGATGCACGACAT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AAGTGCGGCAATGTCATCTCGCC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GGTCAC---TATTAATCAA---------ATCGCGTG.......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................CAATGTCATCTCGCCGATGCACGACAT..........2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AATGTCATCTCGCCGATG..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CAATGTCATCTCGCCGATG..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.TTATCTCTTTCCTTTAT------------TAGC........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCA.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AGTGCGGCAATGTCATCTCGC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AGTGCGGCAATGTCATCT..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCGCCGATGCACGACATTCCA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CGCGTGTCCA-GGTGTCGCCCAT-.....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGCGGCAATGTCATCTCGC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CGCCGATGCACGACATTCCACT....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGAATTTCGGTT-TAC----------TGGCA....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................TCAA---------ATCGCGTGTCCA-GGTGTC............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GTGCGGCAATGTCATCTCG........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ACAAGTGCGGCAATGTCATC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
droSim2
CTTATCTCTTGCCTTTAT------------TAGCCCATATT---CCAAATAGCAGATATCGAAACTGG---------------TGGCTGAATTTCGGTT-TAC----------TGGCACGCGA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--CCCGGTCAC---TATCAATCAA---------ATCGCGTGTCCA-GGTGTTGCCCAT-ATATCAG--------ATAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................TGCGGCAATGTCATCTCGCCGATGCACGA.............2912.00200000000200000000
...............................................................................................................................................................................................................................................................................................................................................TCGCCGATGCACGACATTCCACTGTA.2612.00200000001000010000
......................................................................................................................................................................................................................................................................................................................................AATGTCATCTCGCCGATGCACGACA...........2511.00100010000000000000
........................................................................................................................................................................................................................................................................................................................AAAACAAGTGCGGCAATGTCATCTCGCC......................2811.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCATCTCG........................2411.00100000000000010000
............................................................................................................................................................................................................................................................................................................................CAAGTGCGGCAATGTCATCTCGCCGA....................2611.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................AAACAAGTGCGGCAATGT...............................1811.00101000000000000000
............................................CCAAATAGCAGATATCGAAAC.........................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............TAT------------TAGCCCATATT---CCAA..........................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
......................................................................................CTGAATTTCGGTT-TAC----------TGG......................................................................................................................................................................................................................................................1911.00100000100000000000
......................................................................................................................................................................................................................................................................................................TCTGGCCATTCTCCA.....................................................1520.50100000001000000000
droSec2
CTT------------TAT------------TAGCCCATA-------ATATAGCAGATATCGAAACTGG---------------TGGCTGAATTTCGGTT-TAC----------TGGCACGCGA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--CCCGGTCAC---TATCAATCAA---------ATCGCGTGTCCA-GGTGTCGCCCAT-ATATCAG--------ACAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCATCT..........................2213.0030021
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCATCTCGC.......................2511.0011000
...........................................................................................................................................................................................................................................................................................................................ACAAGTGCGGCAATGTCATCTCGCC......................2511.0010010
...........................................................................................................................................................................................................................................................................................................................ACAAGTGCGGCAATGTCATCT..........................2111.0010010
...........................................................................................................................................................................................................................................................................................................................ACAAGTGCGGCAATGTCATC...........................2011.0010001
.............................................................................................................................................................................................................ATCAA---------ATCGCGTGTCCA-GGTGTC............................................................................................................................2311.0010010
........................................................................................................................................................................................................................................................................................................................AAAACAAGTGCGGCAATGTCATCT..........................2411.0010010
droYak3
CTTATCTCTTAGCTTTAT------------TGGTTCATATT---CGAAATAGAAGATATCGGACCTGG---------------TGTCCAAACTTCGGTT-TAT----------TGACACGCGA---AT----------------------TAGTGACCTTTGTCTAGCCGACAGGT---------C--TCCAGTCAC---TATCAATCAA---------ATCGCGTGCCC------------AT-ATATCAG--------ACTT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................CAAGTGCGGCAATGTCATCTCGC.......................2311.00100000010000
............................................................................................................................................................................................................................................................................................................................................ATCTCGCCGATGCACGACATTCCACT....2611.00101000000000
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCATCTCGCC......................2611.00100000010000
.........................................................................................................................................................................................................................................................................................................................................GTCATCTCGCCGATGCACGACATTCCAC.....2811.00101000000000
..............................................................................................................................................................................................................................................................................................................................AGTGCGGCAATGTCATCTCGCC......................2211.00101000000000
..........................................................................................................................................................................................................................................................................................................................................TCATCTCGCCGATGCACGA.............1911.00101000000000
droEre2
CTTATCTCTTAGCTTTAT------------TGGCCAATATT---CCAAATAGCAGATATCGAAACTGG---------------TGGCCAAACTTCGGAT-TAC----------TGGCACGCGA---GC----------------------TAGTGACCTTTGTCTAGCCGTCAGGT---------C--TCCGGTCAC---TATTAATCAA---------ATCGCGTGTCCA-GGTGTCGCCTAT-ATATCAA--------AAAT-----------------------AATAATTTCTGGCCATTCTCCACAGAAAACAAGTGCGGCAATGTCATCTCGCCGATGCACGACATTCCACTGTACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCATCTCGCC......................2612.0020100010
...............................................................................................................................................................................................................................................................................................................................GTGCGGCAATGTCATCTCGCC......................2111.0010001000
.........................................................................................................................................................................................................................................................................................................................................GTCATCTCGCCGATGCACGACATTCCACT....2911.0011000000
.........................................................................................................................................................................................................................................................................................................................................GTCATCTCGCCGATGCACGAC............2111.0010100000
..............................................................................................................................................................................................................................................................................................................................AGTGCGGCAATGTCATCTCGCC......................2211.0010001000
............................................................................................................................................................................................................................................................................................................................CAAGTGCGGCAATGTCATCT..........................2011.0010000100
...............................................................................................GGAT-TAC----------TGGCACGCGA---GC----------------------T...................................................................................................................................................................................................................2011.0010001000
............................................................................................................................................................................................................................................................................................................................CAAGTGCGGCAATGTCATCTCGCCGA....................2611.0010001000
..........................................................................................................................................................................................................................................................................................................................AACAAGTGCGGCAATGTCATCTCGC.......................2511.0010000100
...............................................................................................................................................................................................................................................................................................................................GTGCGGCAATGTCATCTCGCCGATGCA................2711.0011000000
.............................................................................................................................................................................................................................................................................................................................AAGTGCGGCAATGTCATCT..........................1911.0010001000
...........................................................................................................................................................................................................................................................................................................................ACAAGTGCGGCAATGTCA.............................1811.0010000010

Generated: 05/18/2015 at 12:20 AM