ID:

dps_1273

 Coordinate:

3:17254773-17254923 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.5 -16.5 -16.1

Flybase annnotation

CDS [Dpse\GA25082-cds]; exon [dpse_GLEANR_16300:1]; intron [Dpse\GA25082-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AACCGCTGAGAAGGGAGCCAAGAACTCGCCCAGCTACAGCCTTTATTTCAGTGAGTACGAAAAGTGTGTTCTATGTGTGTGAACTATGGCCGGTCAATGTGACCCGGCGGCGATTCCCAGACGGTGCCATCGCTGGACATCTGTGCGAGAAAAGAAGATCATTCATAAACTACGGATAATGTAGAATCATAGCTACATATAGGCCGTTATGTAACAAGTCAATCCGGACTCTGGTTATTTAACGCATAGCT
*************************************************************************(((.((.(((.....((((((((...))).))))).....))).)).))).....*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M062
head
 M059
embryo
 M022
male body		 SRR902012
CNS imaginal disc
 V112
male body		 GSM343916
embryo
..............GAGCCAAGAACTCGCCCAGCTACAGC................................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0
.......GAGAAGGGAGCCAAGAACT................................................................................................................................................................................................................................. 19 0 1 4.00 4 3 0 0 0 0 1 0
..............GAGCCAAGAACTCGCCCAGC......................................................................................................................................................................................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0
...............AGCCAAGAACTCGCCCAGC......................................................................................................................................................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0
.......GAGAAGGGAGCCAAGAACTCGCCCAG.......................................................................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0
................GCCAAGAACTCGCCCAGCTACAGCCTTT............................................................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0
.......GAGAAGGGAGCCAAGAACTCGCCCAGC......................................................................................................................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0
...............AGCCAAGAACTCGCCCAGCTACAGCCTTT............................................................................................................................................................................................................... 29 0 1 3.00 3 3 0 0 0 0 0 0
......TGAGAAGGGAGCCAAGAACTCGC.............................................................................................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0
.......GAGAAGGGAGCCAAGAACTCGC.............................................................................................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0
..............GAGCCAAGAACTCGCCCAGCTACAGCC.................................................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0
................GCCAAGAACTCGCCCAGCTACAGC................................................................................................................................................................................................................... 24 0 1 2.00 2 1 0 0 1 0 0 0
................GCCAAGAACTCGCCCAGCT........................................................................................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0
.....................GAACTCGCCCAGCTACAGCCT................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0
...............AGCCAAGAACTCGCCCAGCT........................................................................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0
...............AGCCAAGAACTCGCCCAGCTACAGC................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.......................ACTCGCCCAGCTACAGCCTTT............................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
....................AGAACTCGCCCAGCTACAGCCTTT............................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
AACCGCTGAGAAGGGAGCCAAGAACTC................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
.....CTGAGAAGGGAGCCAAGAACTCGCCC............................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
..................CAAGAACTCGCCCAGCTAC...................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
..............GAGCCAAGAACTCGCCCAG.......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
......TGAGAAGGGAGCCAAGAA................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
...................AAGAACTCGCCCAGCTACAGCCTTT............................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................GGCGATTCCCAGACGGTGCC........................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................TGTTGTATGTGTGTGAACTA..................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
............GGGAGGCAAGAACTCGCCC............................................................................................................................................................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0 0
AACCGCTGAGAAGGGAGCCAAGA.................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.......GAGAAGGGAGCCAAGAACTCG............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.ACCGCTGAGAAGGGAGCCAAGAACT................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
............GGGAGCCAAGAACTCGCCCA........................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.......GAGAAGGGAGCCAAGAACTCGCCCAGCT........................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
.........GAAGGGAGCCAAGAACTCGCCCAGC......................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.............GGAGCCAAGAACTCGCCCAGC......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................CAATGTGACCCGGCGGCGA.......................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
........AGAAGGGAGCCAAGAACTCGCCCAG.......................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TAGGCCGTTATGTAACAAGTCAATCC.......................... 26 0 1 1.00 1 0 1 0 0 0 0 0
.........GAAGGGAGCCAAGAACTCGCCC............................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
....GCTGAGAAGGGAGCCAAGAACTCGCCC............................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
....GCTGAGAAGGGAGCCAAGAACTCGC.............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................TGTGTGTGAACTATGGCCG............................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
............GGGAGCCAAGAACTCGCCCAGCTAC...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.................CCAAGAACTCGCCCAGCTACAGC................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0
.......GAGAAGGGAGCCAAGAACTCGCCCA........................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
........CGAAGGGAGCCAAGAACTCGCCCAGC......................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
...................AAGAACTCGCCCAGCTACAGC................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
AACCGCTGAGAAGGGAGCCAA...................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...CGCTGAGAAGGGAGCCAAGAACT................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................GACGGTGCCATCGCTGGACATC.............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................CGAAAAGTGTGTTCTATGTG.............................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
AACCGCTGAGAAGGGAGCCAAGAACTCG............................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
..................CAAGAACTCGCCCAGCTACAGC................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
................GCCAAGAACTCGCCCAGCTACAGCCT................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
..............GAGCCAAGAACTCGCCCAGCTAC...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
AACCGCTGAGAAAGGAGCCAAGA.................................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
AACCGCTGAGAAGGGAGCC........................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................ATATAGGCCGTTATGTAACAAGT................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................AGACGGTGCCATCGCTGGACA................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
...............AGCCAAGAACTCGCCCAGCTACAGCCTT................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
..................CAAGAACTCGCCCAGCTACAGCCTT................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................TATGTGTGTGAACTATGGCCG............................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................ACAAGTCAATCCGGACTCTGGT................ 22 0 1 1.00 1 1 0 0 0 0 0 0
...............AGCCAAGAACTCGCCCAGCTA....................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.................CCAAGAACTCGCCCAGCTACAGCCTTT............................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................GTGAACTATGGCCGGTCAATG........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................CGAAAAGTGTGTTGTATGTGT............................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................GTGTGAACTATGGCCGGTCA........................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
................GCCAAGAACTCGCCCAGCTACAGCCTT................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
...................AAGAACTCGCCCAGCTACAGCCT................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................AGTGTGTTCTATGTGTGC........................................................................................................................................................................... 18 1 2 0.50 1 0 0 1 0 0 0 0
...................................................TGAGTACGAAAAATGTGTTGT................................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0
.............................................................CAGTGGGTTCTATGTGTGTG.......................................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 1
.........................................................................................................GGCGACGATTCCCAGATGG............................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0
...........................................................AACAGTGTGTGTTATGTGTGT........................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0
...........AGTGAGACAAGAACCCGCC............................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

TTGGCGACTCTTCCCTCGGTTCTTGAGCGGGTCGATGTCGGAAATAAAGTCACTCATGCTTTTCACACAAGATACACACACTTGATACCGGCCAGTTACACTGGGCCGCCGCTAAGGGTCTGCCACGGTAGCGACCTGTAGACACGCTCTTTTCTTCTAGTAAGTATTTGATGCCTATTACATCTTAGTATCGATGTATATCCGGCAATACATTGTTCAGTTAGGCCTGAGACCAATAAATTGCGTATCGA
***************************************************************************************************************************(((.((.(((.....((((((((...))).))))).....))).)).))).....************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
................CGGTTCTTGAGCGGGTCGAT....................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0
.......................................................................................................................................................................................................ATCCGGCAATACATTGTTCAG............................... 21 0 1 1.00 1 1 0
..........................GCGGGTCGGTGTCGGGAATAA............................................................................................................................................................................................................ 21 2 1 1.00 1 1 0
...................................................................................................................GGGTCTGCCACGGTAGCGA..................................................................................................................... 19 0 1 1.00 1 1 0
.............CCTCGGTTCTTGAGCGGGTCG......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0
....................................................CTCATGCTTTTCACACAAGAT.................................................................................................................................................................................. 21 0 1 1.00 1 1 0
......................................CGGAAATAAAGTCACTCATG................................................................................................................................................................................................. 20 0 1 1.00 1 1 0
.............................................AAAGTCACTCATGCTTTTCAC......................................................................................................................................................................................... 21 0 1 1.00 1 1 0
...........TCCCTCGGTTCTTGAGCGGGT........................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0
..........................................................................................................CGCCGCTGAGGGTCTGCCGCG............................................................................................................................ 21 2 2 0.50 1 1 0
.............................................................................................................................CGGAAGCGTCCTGTAGGCAC.......................................................................................................... 20 3 3 0.33 1 0 1
.................................................................................................................................................................................................................ACAAGGTTTAGTTAGGCCTG...................... 20 3 14 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:17254723-17254973 + dps_1273 AACCGCTGAGAAGGGAGCCAAGAACTCGCCCAGCTACAGCCTTTATTTCAGTGAGTACG----AAAAGTGTGTTCTATGTGTGTGAACTAT--------GGCC---GGT---------CAATGTGACCCGGCGGCGATTCCCAGACGGTGCCATC---GCTGG--------AC----ATCTGTGCGA--G------------AAAA-GAA-GATCATTCATAAACTACGGATAATGTAG---------AATCATAGCTACATATAGGCCGTTATGTAACAAGTCAATCCGGACTCTGGTTATTTAAC------------------GCATAGCT------------
droPer2 scaffold_31:535325-535575 - AACCGCTGAGAAGGGAGCCAAGAACTCGCCCAGCTACAGCCTTTATTTCAGTGAGTACG----AAAAATGAGTTGTATGTGTGTGAACTAT--------GGCC---GGT---------CAATGTGACCCGGCGGCGATTCCCAGACGGTGCCATC---GCTGG--------AC----ATCTGTGCGA--G------------AAAA-GAA-GATCATTCATAAACTACGGATAATGTAG---------AATCATAGCTACATATAGGCCGTTATGTAACAAGTCAATCCGGACTCTGGTTATTTAAC------------------GCATAGCT------------
droWil2 scf2_1100000004512:2066496-2066552 - GACCGTGGAGAAGGGCGCAAAGAATTCGCCGAATTATAGCCTTTATTTCAGTAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:14714781-14714843 + AACAATTGCAAAAGGCGCCATAAACTCGCCCAACTACAGCCTATATTTCAGTAAGTATG----CAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:10187629-10187693 + AACAATTGCTAAAGGCAACATAAACTCGCCGGACTATGCCCTTTATTTCAGTAAGTATG----CAAAA-----------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:14722822-14722880 + AACCGTTGCGAAAGGCGCCAAGAACTCGTCCAACTACAGCCTCTATTTCAGTAAGTATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:15997891-15998118 - GACAGTTGAGAAGGGCGCGAAGAACTCGCCGAGCTACAGCCTGTACTTCAGTGAGTAATATTGCCAA-------------------------------------AA----TCTGAACCCAATGTGACCCGGCA----TAACCTGCTGGCGTCACCGGC-----CTG------CATTCCGCAATGTAA--TAAA-------------TCAGTGAGCC-TTAATTACAACGGATTAC--------AG-CTAATCATAGCTA------ATCCATTATGCAACAAGTCAAACCGGACTCTGCTTACTCAAC------------------GCGTCGCT------------
droBip1 scf7180000396567:484505-484730 - GACAGTTGAGAAGGGCGCAAAGAACTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAATATTGCCAA-------------------------------------AA----TCTGAACCCG--ATGACCCGGCA----TAACCTGCTGGCGTCACAGGC-----CTG------CATTCAGTAGT--GCAATAAA-------------TCAGTGGGCT-TTAATTACAACGGATTAC--------AG-CTAATCATAGCTA------ATCCATTATGCAACAAGTCAAACCGGACTCTGCTTATTCAAC------------------GCGTCGCT------------
droKik1 scf7180000302277:722719-722961 + GACCGTGGAGAAGGGCGCCCGCAACTCGCCGAGTTACAGCCTGTATTTCAGTGAGTAAG----CCATA------------------------------------AA----TTTGGCCCCTATGTGACCCGGCA----TAACCTGCTGGCGTCAC------------------CAAGCCCCAATTAAG--TG-------------AA-GGG--GGCAATTGCATCCAACGGATTACCTT-ACTGAGTTTAATCGTGGCCAG-----AGCAATTATGCAACAAGTCAAACCGGACTCTGATTACTCAACGCCGCGCCGTCGTCGTCGTCGTCGCA------------
droFic1 scf7180000453342:300018-300215 - GACCGTGGAGAAGGGCGCCAAGAACTCGCCGAGCTACAGCCTGTACTTCAGTAAGTTCC----CGAG---------------------------------------------------AAAGGTGACCCGGCC----TAACCTCTCGGCTTGGG---------TTC------CATTT-GCA--TTTCCTGCAC-------------CTAATG--CAG----TTACGGCAT-----AGGGGCTTAG-TTAATC------GG-----GCAAATTATGCAACAAGTCAAACCGGACTCTCG----TTAGC------------------TCGTCGGC------------
droEle1 scf7180000491214:4544361-4544587 + AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGG----CCAAA--------------------------------------AGTGTGTGGGTCCAATGTGACCCGGCA----TAACCCTCTGGCTTCCCAGCC-----ATG------CATTT-GCATATTGCCCGAAC-------------CCTTTG--CAG----TCACAACAC-----GGGAACTAAG-TTAATCACAGCCGG-----GCTGATTATGCAACAAGTCAAACCGGACTCTGCTTAGTTAAC------------------TCGTCGCT------------
droRho1 scf7180000776849:140608-140832 - AACCGTTGAGAAGGGCGCCAAGAATTCGACGAGCTACAGCCTGTATTTCAGTGAGTAGG----CCAAA-------------------------ATT---------------CCCGGCCCAATGTGACCCGGCA----TAACCCTCTAGCTTCCCAACT-----ATA------CATTT-GCATTTTACCCGAAC-------------CCAATG--CAG----TTACAACAC-----AGGGGTTTAG-TTAATCGCAGCCGG-----GCTGATTATGCAACAAGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCT------------
droBia1 scf7180000301754:3459531-3459743 + GACCGTCGAGAAGGGCGCCAAGAACTCGCCCAGCTACAGCCTGTACTTCAGTGAGTAGCCCCG----A----------------GA-----CCCTCCGAGACCG-CGGC---------CAATGTGACCCGGCA----TAACCCTTCGGCGTCG------------G------CAATG-GCC-------C-CGCTAGTTACACA-AACTAGTG--CAG----C------------------------CTGATCGCAGCCGG-----GCTGCTTATGCAACAAGTCAAACCGGACTCGGCGTAATCAAA------------------TCGTCACA------------
droTak1 scf7180000414175:75403-75623 + AACCGTTGAGAAGGGCGCCAAGAATTCGCCCAGCTACAGCCTGTATTTCAGTGAGTA---------------------------------------------------------------ACTTGACCCGGCA----TAACCCTTCCGCATCGGAAAA-----TGCAAAATGCATTG-GCAAGTCCCCC-AACTAGTTACTCG-AACTAGTG--CAG-----------------------CTTAC-TTAATCGCAGCCGG-----GATGATTATGCAACAAGTCAAACCGGACTCTGGCTATTCAGC------------------TCGTCACAGCGCCTTTATCT
droEug1 scf7180000409464:813703-813933 - AACCGTCGAAAAGGGCGCCAAGAATTCGCCGAGCTATAGTCTTTACTTCAGTGAGTATG----CCGA--------------------------AC---------------CCCGGGCCCAATGTGACCCGGCA----TAACCTTTT-GTATCCCAA---------G------CATGT-GCAAGCTAGCCGAACTAGT----------TACTG--CACTTACATACACTACATTACATAGACTTAG-CTAATCACAGCCGG-----ATTGATTATGCAACAAGTCAAACCGGACTCTGCCTACCTAGC------------------TCGTCGCT------------
dm3 chr2R:20448201-20448425 - AACCGTTGAGAAGGGCGCTAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGAGTAG----C-----------------------GCATTGGGGGCCAAATGT---------GAATGTGACCCGGCT----TAACCCTTT-GCTTGC------------G------CATTT-GCAAGTTACCCAAAC-------------TCGGTG--CAG----TTAATGCAC-----CTAGAATTAG-TTGATCGGTACCGG-----AATGGTTATGCAACAGGTCAAACCGGACTCTGCTTATTTAAC------------------TCGACGCA------------
droSim2 2r:20928161-20928385 - dsi_10151 AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGAGCAG----C-----------------------GCATTGGCGGCCGAATGT---------GAATGTGACCCGGCT----TAACCTTTT-ACTTCC------------G------CATTT-GCAAGTTACCCAAAC-------------TAAATG--CAG----TTACTGCAG-----CTAGAATTAG-TTGATCGGTACCGG-----ACTGATTATGCAACGGGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCA------------
droSec2 scaffold_23:321971-322195 - AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGAGCAG----C-----------------------GCATTGGGGGCCGAATGT---------GAATGTGACCCGGCT----TAACCTTTT-GCTTCC------------G------CATTT-GCAAGTAACCCAAAC-------------AAGGTG--CAG----TTGCTGCAC-----CTTGAATTAG-TTGATCGGTACCGG-----ACTGATTACGCAACAGCTCAAACCGGACTCTTCTTATTTAAC------------------TCGTCGCA------------
droYak3 2R:20417792-20418010 - AACCGTTGAGAAGGGCGCCAAAAATTCGCCGAGCTACAGCCTGTATTTCAGTAAGTAGAGCAG----C-----------------------GCATT---------------GGGTGCCGAATGTGACCCGGCT----TAACCCTTT-GCTTCC------------G------CATTT-GCAAGTTACCCAAAC-------------TGGGTG--CAG----TTACTGCAG-----CTAGCATTAG-TTGATTGCTACCGG-----GCTGATTATGCAACAAGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCA------------
droEre2 scaffold_4845:21820131-21820348 - AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGACCAT----C-----------------------GCAT----------------CGAGACCGAATGTGACCCGGCT----TAACCCTTC-GCTTCC------------G------CATTT-GCAAGTTACCCAAAC-------------TCGGTG--CAG----TTACTGCAC-----ATAGCATTAG-TTGATCGCTACCTG-----ACTGATTATGCAACAAGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCA------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AACCGCTGAGAAGGGAGCCAAGAACTCGCCCAGCTACAGCCTTTATTTCAGTGAGTACG----AAAAGTGTGTTCTATGTGTGTGAACTAT--------GGCC---GGT---------CAATGTGACCCGGCGGCGATTCCCAGACGGTGCCATC---GCTGG--------AC----ATCTGTGCGA--G------------AAAA-GAA-GATCATTCATAAACTACGGATAATGTAG---------AATCATAGCTACATATAGGCCGTTATGTAACAAGTCAATCCGGACTCTGGTTATTTAAC------------------GCATAGCT------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............GAGCCAAGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2614.0040400000000
.......GAGAAGGGAGCCAAGAACT...............................................................................................................................................................................................................................................................................................................................1914.0040300001000
..............GAGCCAAGAACTCGCCCAGC.......................................................................................................................................................................................................................................................................................................................2013.0030300000000
...............AGCCAAGAACTCGCCCAGC.......................................................................................................................................................................................................................................................................................................................1913.0030300000000
.......GAGAAGGGAGCCAAGAACTCGCCCAG........................................................................................................................................................................................................................................................................................................................2613.0030300000000
................GCCAAGAACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2813.0030300000000
.......GAGAAGGGAGCCAAGAACTCGCCCAGC.......................................................................................................................................................................................................................................................................................................................2713.0030300000000
...............AGCCAAGAACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2913.0030300000000
......TGAGAAGGGAGCCAAGAACTCGC............................................................................................................................................................................................................................................................................................................................2312.0020200000000
.......GAGAAGGGAGCCAAGAACTCGC............................................................................................................................................................................................................................................................................................................................2212.0020200000000
..............GAGCCAAGAACTCGCCCAGCTACAGCC................................................................................................................................................................................................................................................................................................................2712.0020200000000
................GCCAAGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2412.0021100000000
................GCCAAGAACTCGCCCAGCT......................................................................................................................................................................................................................................................................................................................1912.0020200000000
.....................GAACTCGCCCAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2112.0020200000000
...............AGCCAAGAACTCGCCCAGCT......................................................................................................................................................................................................................................................................................................................2012.0020200000000
...............AGCCAAGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................ACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2111.0010100000000
....................AGAACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2411.0010100000000
AACCGCTGAGAAGGGAGCCAAGAACTC..............................................................................................................................................................................................................................................................................................................................2711.0010100000000
.....CTGAGAAGGGAGCCAAGAACTCGCCC..........................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................CAAGAACTCGCCCAGCTAC....................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............GAGCCAAGAACTCGCCCAG........................................................................................................................................................................................................................................................................................................................1911.0010100000000
......TGAGAAGGGAGCCAAGAA.................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...................AAGAACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................GGCGATTCCCAGACGGTGCC.................................................................................................................................................................................................2011.0010100000000
AACCGCTGAGAAGGGAGCCAAGA..................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......GAGAAGGGAGCCAAGAACTCG.............................................................................................................................................................................................................................................................................................................................2111.0010100000000
.ACCGCTGAGAAGGGAGCCAAGAACT...............................................................................................................................................................................................................................................................................................................................2511.0010100000000
............GGGAGCCAAGAACTCGCCCA.........................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......GAGAAGGGAGCCAAGAACTCGCCCAGCT......................................................................................................................................................................................................................................................................................................................2811.0010100000000
.........GAAGGGAGCCAAGAACTCGCCCAGC.......................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............GGAGCCAAGAACTCGCCCAGC.......................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................CAATGTGACCCGGCGGCGA................................................................................................................................................................................................................1911.0010100000000
........AGAAGGGAGCCAAGAACTCGCCCAG........................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................TAGGCCGTTATGTAACAAGTCAATCC........................................................2611.0010001000000
.........GAAGGGAGCCAAGAACTCGCCC..........................................................................................................................................................................................................................................................................................................................2211.0010100000000
....GCTGAGAAGGGAGCCAAGAACTCGCCC..........................................................................................................................................................................................................................................................................................................................2711.0010100000000
....GCTGAGAAGGGAGCCAAGAACTCGC............................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............................................................................TGTGTGTGAACTAT--------GGCC---G..............................................................................................................................................................................................................................................1911.0010100000000
............GGGAGCCAAGAACTCGCCCAGCTAC....................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................CCAAGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2311.0010000000001
.......GAGAAGGGAGCCAAGAACTCGCCCA.........................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................AAGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2111.0010010000000
AACCGCTGAGAAGGGAGCCAA....................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...CGCTGAGAAGGGAGCCAAGAACT...............................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................................................................................................................................GACGGTGCCATC---GCTGG--------AC----ATC.....................................................................................................................................................................2211.0010100000000
.........................................................CG----AAAAGTGTGTTCTATGTG........................................................................................................................................................................................................................................................................2011.0010100000000
AACCGCTGAGAAGGGAGCCAAGAACTCG.............................................................................................................................................................................................................................................................................................................................2811.0010100000000
..................CAAGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2211.0010100000000
................GCCAAGAACTCGCCCAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2611.0010100000000
..............GAGCCAAGAACTCGCCCAGCTAC....................................................................................................................................................................................................................................................................................................................2311.0010100000000
AACCGCTGAGAAGGGAGCC......................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................ATATAGGCCGTTATGTAACAAGT..............................................................2311.0010100000000
..............................................................................................................................................AGACGGTGCCATC---GCTGG--------AC----A.......................................................................................................................................................................2111.0010100000000
...............AGCCAAGAACTCGCCCAGCTACAGCCTT..............................................................................................................................................................................................................................................................................................................2811.0010100000000
..................CAAGAACTCGCCCAGCTACAGCCTT..............................................................................................................................................................................................................................................................................................................2511.0010100000000
...........................................................................TATGTGTGTGAACTAT--------GGCC---G..............................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................ACAAGTCAATCCGGACTCTGGT..............................................2211.0010100000000
...............AGCCAAGAACTCGCCCAGCTA.....................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................CCAAGAACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2711.0010100000000
..................................................................................GTGAACTAT--------GGCC---GGT---------CAATG..............................................................................................................................................................................................................................2111.0010100000000
................................................................................GTGTGAACTAT--------GGCC---GGT---------CA.................................................................................................................................................................................................................................2011.0010100000000
................GCCAAGAACTCGCCCAGCTACAGCCTT..............................................................................................................................................................................................................................................................................................................2711.0010100000000
...................AAGAACTCGCCCAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................AGTGTGTTCTATGTGTGC.....................................................................................................................................................................................................................................................................1820.5010010000000
droPer2
AACCGCTGAGAAGGGAGCCAAGAACTCGCCCAGCTACAGCCTTTATTTCAGTGAGTACG----AAAAATGAGTTGTATGTGTGTGAACTAT--------GGCC---GGT---------CAATGTGACCCGGCGGCGATTCCCAGACGGTGCCATC---GCTGG--------AC----ATCTGTGCGA--G------------AAAA-GAA-GATCATTCATAAACTACGGATAATGTAG---------AATCATAGCTACATATAGGCCGTTATGTAACAAGTCAATCCGGACTCTGGTTATTTAAC------------------GCATAGCT------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................CAAGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2213.003300000
...........AGGGAGCCAAGAACTCGCCCAGCT......................................................................................................................................................................................................................................................................................................................2412.002200000
...................AAGAACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2512.002200000
............GGGAGCCAAGAACTCGCC...........................................................................................................................................................................................................................................................................................................................1812.002200000
...........AGGGAGCCAAGAACTCGCCC..........................................................................................................................................................................................................................................................................................................................2012.002200000
...............AGCCAAGAACTCGCCCAGCTACAGCCTTT.............................................................................................................................................................................................................................................................................................................2911.001100000
...................AAGAACTCGCCCAGCTACAGCCTTTAT...........................................................................................................................................................................................................................................................................................................2711.001100000
....GCTGAGAAGGGAGCCAAGAACTCGCCC..........................................................................................................................................................................................................................................................................................................................2711.001100000
....................AGAACTCGCCCAGCTACAGC.................................................................................................................................................................................................................................................................................................................2011.001010000
....GCTGAGAAGGGAGCCAAG...................................................................................................................................................................................................................................................................................................................................1811.001010000
........................CTCGCCCAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................1811.001100000
..................CAAGAACTCGCCCAGCTACAGCCTT..............................................................................................................................................................................................................................................................................................................2511.001001000
.....................GAACTCGCCCAGCTACAGCCTTTAT...........................................................................................................................................................................................................................................................................................................2511.001010000
...............AGCCAAGAACTCGCCCAGCT......................................................................................................................................................................................................................................................................................................................2011.001010000
.......GAGAAGGGAGCCAAGAACTCGCCCA.........................................................................................................................................................................................................................................................................................................................2511.001010000
......TGAGAAGGGAGCCAAGAACTCGCCC..........................................................................................................................................................................................................................................................................................................................2511.001010000
..............GAGCCAAGAACTCGCCCAGC.......................................................................................................................................................................................................................................................................................................................2011.001010000
AACCGCTGAGAAGGGAGCCAAGAACTC..............................................................................................................................................................................................................................................................................................................................2711.001100000
droWil2
GACCGTGGAGAAGGGCGCAAAGAATTCGCCGAATTATAGCCTTTATTTCAGTAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
GACCGTGGAGAAGGGCGCAAAGA..................................................................................................................................................................................................................................................................................................................................2314.00400310
..CCGTGGAGAAGGGCGCAAAGA..................................................................................................................................................................................................................................................................................................................................2111.00100100
.ACCGTGGAGAAGGGCGCAAAGAATT...............................................................................................................................................................................................................................................................................................................................2511.00100100
.......................ATTCGCCGAATTATAGCCTTT.............................................................................................................................................................................................................................................................................................................2111.00100010
....GTGGAGAAGGGCGCAAAGAAT................................................................................................................................................................................................................................................................................................................................2111.00101000
...........AGGGCGCAAAGAATTCGC............................................................................................................................................................................................................................................................................................................................1811.00100010
...............CGCAAAGAATTCGCCGAAT.......................................................................................................................................................................................................................................................................................................................1911.00101000
GACCGTGGAGAAGGGCGCAAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2911.00100100
...................AAGAATTCGCCGAATTATAGCCTT..............................................................................................................................................................................................................................................................................................................2411.00101000
........AGAAGGGCGCAAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
AACAATTGCAAAAGGCGCCATAAACTCGCCCAACTACAGCCTATATTTCAGTAAGTATG----CAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......TGCAAAAGGCGCCATAAACT...............................................................................................................................................................................................................................................................................................................................2012.002001000000000001000000000000000000000000000000000000000000000000
................GCCATAAACTCGCCCAACTACAGCC................................................................................................................................................................................................................................................................................................................2512.002200000000000000000000000000000000000000000000000000000000000000
.......................ACTCGCCCAACTACAGCCTATATTTCA.......................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................AACTCGCCCAACTACAGCCT...............................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................ATAAACTCGCCCAACTACAGCCT...............................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.......................ACTCGCCCAACTACAGCCT...............................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...AATTGCAAAAGGCGCCATAAACT...............................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AACAATTGCTAAAGGCAACATAAACTCGCCGGACTATGCCCTTTATTTCAGTAAGTATG----CAAAA-----------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........AAAGGCAACATAAACTCGCC...........................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
AACCGTTGCGAAAGGCGCCAAGAACTCGTCCAACTACAGCCTCTATTTCAGTAAGTATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GACAGTTGAGAAGGGCGCGAAGAACTCGCCGAGCTACAGCCTGTACTTCAGTGAGTAATATTGCCAA-------------------------------------AA----TCTGAACCCAATGTGACCCGGCA----TAACCTGCTGGCGTCACCGGC-----CTG------CATTCCGCAATGTAA--TAAA-------------TCAGTGAGCC-TTAATTACAACGGATTAC--------AG-CTAATCATAGCTA------ATCCATTATGCAACAAGTCAAACCGGACTCTGCTTACTCAAC------------------GCGTCGCT------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................CGCCGAGCTACAGCCTGTAC...........................................................................................................................................................................................................................................................................................................2012.002110000
...........................................................................................................................................................................................................................................................................CCATTATGCAACAAGTCAAACC........................................................2211.001010000
......TGAGAAGGGCGCGAAGAACTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................2811.001010000
..................GAAGAACTCGCCGAGCTACAGCCTGTAC...........................................................................................................................................................................................................................................................................................................2811.001100000
....GTTGAGAAGGGCGCGAAGAACTCGCC...........................................................................................................................................................................................................................................................................................................................2611.001000010
....GTTGAGAAGGGCGCGAAGAACT...............................................................................................................................................................................................................................................................................................................................2211.001000001
..................GAAGAACTCGCCGAGCTACAGCCTGTA............................................................................................................................................................................................................................................................................................................2711.001010000
GACAGTTGAGAAGGGCGC.......................................................................................................................................................................................................................................................................................................................................1811.001010000
..........................CGCCGAGCTACAGCCTGTACT..........................................................................................................................................................................................................................................................................................................2111.001100000
.......................ACTCGCCGAGCTACAGCCTGTACTT.........................................................................................................................................................................................................................................................................................................2511.001100000
.......GAGAAGGGCGCGAAGAACTCGCC...........................................................................................................................................................................................................................................................................................................................2311.001000010
.................................CTACAGCCTGTACTTCAAA.....................................................................................................................................................................................................................................................................................................19200.051010000
droBip1
GACAGTTGAGAAGGGCGCAAAGAACTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAATATTGCCAA-------------------------------------AA----TCTGAACCCG--ATGACCCGGCA----TAACCTGCTGGCGTCACAGGC-----CTG------CATTCAGTAGT--GCAATAAA-------------TCAGTGGGCT-TTAATTACAACGGATTAC--------AG-CTAATCATAGCTA------ATCCATTATGCAACAAGTCAAACCGGACTCTGCTTATTCAAC------------------GCGTCGCT------------SizeHit CountTotal NormTotal
No Reads
droKik1
GACCGTGGAGAAGGGCGCCCGCAACTCGCCGAGTTACAGCCTGTATTTCAGTGAGTAAG----CCATA------------------------------------AA----TTTGGCCCCTATGTGACCCGGCA----TAACCTGCTGGCGTCAC------------------CAAGCCCCAATTAAG--TG-------------AA-GGG--GGCAATTGCATCCAACGGATTACCTT-ACTGAGTTTAATCGTGGCCAG-----AGCAATTATGCAACAAGTCAAACCGGACTCTGATTACTCAACGCCGCGCCGTCGTCGTCGTCGTCGCA------------SizeHit CountTotal NormTotal
No Reads
droFic1
GACCGTGGAGAAGGGCGCCAAGAACTCGCCGAGCTACAGCCTGTACTTCAGTAAGTTCC----CGAG---------------------------------------------------AAAGGTGACCCGGCC----TAACCTCTCGGCTTGGG---------TTC------CATTT-GCA--TTTCCTGCAC-------------CTAATG--CAG----TTACGGCAT-----AGGGGCTTAG-TTAATC------GG-----GCAAATTATGCAACAAGTCAAACCGGACTCTCG----TTAGC------------------TCGTCGGC------------SizeHit CountTotal NormTotal
No Reads
droEle1
AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGG----CCAAA--------------------------------------AGTGTGTGGGTCCAATGTGACCCGGCA----TAACCCTCTGGCTTCCCAGCC-----ATG------CATTT-GCATATTGCCCGAAC-------------CCTTTG--CAG----TCACAACAC-----GGGAACTAAG-TTAATCACAGCCGG-----GCTGATTATGCAACAAGTCAAACCGGACTCTGCTTAGTTAAC------------------TCGTCGCT------------SizeHit CountTotal NormTotal
No Reads
droRho1
AACCGTTGAGAAGGGCGCCAAGAATTCGACGAGCTACAGCCTGTATTTCAGTGAGTAGG----CCAAA-------------------------ATT---------------CCCGGCCCAATGTGACCCGGCA----TAACCCTCTAGCTTCCCAACT-----ATA------CATTT-GCATTTTACCCGAAC-------------CCAATG--CAG----TTACAACAC-----AGGGGTTTAG-TTAATCGCAGCCGG-----GCTGATTATGCAACAAGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCT------------SizeHit CountTotal NormTotal
No Reads
droBia1
GACCGTCGAGAAGGGCGCCAAGAACTCGCCCAGCTACAGCCTGTACTTCAGTGAGTAGCCCCG----A----------------GA-----CCCTCCGAGACCG-CGGC---------CAATGTGACCCGGCA----TAACCCTTCGGCGTCG------------G------CAATG-GCC-------C-CGCTAGTTACACA-AACTAGTG--CAG----C------------------------CTGATCGCAGCCGG-----GCTGCTTATGCAACAAGTCAAACCGGACTCGGCGTAATCAAA------------------TCGTCACA------------SizeHit CountTotal NormTotal
No Reads
droTak1
AACCGTTGAGAAGGGCGCCAAGAATTCGCCCAGCTACAGCCTGTATTTCAGTGAGTA---------------------------------------------------------------ACTTGACCCGGCA----TAACCCTTCCGCATCGGAAAA-----TGCAAAATGCATTG-GCAAGTCCCCC-AACTAGTTACTCG-AACTAGTG--CAG-----------------------CTTAC-TTAATCGCAGCCGG-----GATGATTATGCAACAAGTCAAACCGGACTCTGGCTATTCAGC------------------TCGTCACAGCGCCTTTATCTSizeHit CountTotal NormTotal
No Reads
droEug1
AACCGTCGAAAAGGGCGCCAAGAATTCGCCGAGCTATAGTCTTTACTTCAGTGAGTATG----CCGA--------------------------AC---------------CCCGGGCCCAATGTGACCCGGCA----TAACCTTTT-GTATCCCAA---------G------CATGT-GCAAGCTAGCCGAACTAGT----------TACTG--CACTTACATACACTACATTACATAGACTTAG-CTAATCACAGCCGG-----ATTGATTATGCAACAAGTCAAACCGGACTCTGCCTACCTAGC------------------TCGTCGCT------------SizeHit CountTotal NormTotal
No Reads
dm3
AACCGTTGAGAAGGGCGCTAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGAGTAG----C-----------------------GCATTGGGGGCCAAATGT---------GAATGTGACCCGGCT----TAACCCTTT-GCTTGC------------G------CATTT-GCAAGTTACCCAAAC-------------TCGGTG--CAG----TTAATGCAC-----CTAGAATTAG-TTGATCGGTACCGG-----AATGGTTATGCAACAGGTCAAACCGGACTCTGCTTATTTAAC------------------TCGACGCA------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................CTAAGAATTCGCCGAGCTACA...................................................................................................................................................................................................................................................................................................................21113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGAGAAGGGCGCTAAGAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................28111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000010102210001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TAAGAATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000101010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......TGAGAAGGGCGCTAAGAATTCGCC...........................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000000
..................................................GTGAGTAGAGTAG----C-----------------------GCATTGGG......................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....GTTGAGAAGGGCGCTAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................AAGAATTCGCCGAGCTACAGCCTGT.............................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGAGAAGGGCGCTAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000020000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AACCGTTGAGAAGGGCGCT......................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TAAGAATTCGCCGAGCTACAGC.................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000
.................CTAAGAATTCGCCGAGCTACAGCCTGTA............................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTTGAGAAGGGCGCTAAGA..................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................TAAGAATTCGCCGAGCTACAGCCTGTA............................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...................AAGAATTCGCCGAGCTAC....................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................G-TTGATCGGTACCGG-----AATGGT..........................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................GCAC-----CTAGAATTAG-TTGATCGG...........................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAGGGCGCTAAGAATTCGCCGAGCTACA...................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACCGTTGAGAAGGGCGCTAAGAATT...............................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGGGCGCTAAGAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAGAATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........GAAGGGCGCTAAGAATTCGCCGAGCTA.....................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGTTGAGAAGGGCGCTAA....................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTAGAGTAG----C-----------------------GCATTGG.......................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000000000000000000
.ACCGTTGAGAAGGGCGCTAAGAATTCGCC...........................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................GAGCTACAGCCTGTATTTCA.......................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................T-GCAAGTTACCCAAAC-------------TCGGTG--CAG----T...........................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
........................TTCGCCGAGCTACAGCCTGTATT..........................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ATTGGGGGCCAAATGT---------GA.................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGGGCGCTAAGAATTCGCCGAGCTA.....................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAGAATTCGCCGAGCTACAGCC................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.ACCGTTGAGAAGGGCGCT......................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
................GCTAAGAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........AGGGCGCTAAGAATTCGC............................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCGCCGAGCTACAGCCTGTATTTC........................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTGAGAAGGGCGCTAAGAATTCGCC...........................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
................GCTAAGAATTCGCCGAGCT......................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTTGAGAAGGGCGCTAAGAATTCGCC...........................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000
.ACCGTTGAGAAGGGCGCTAAGAA.................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GTATTTCAGTGAGTAGAG.............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................................................................................ATGCAACAGGTCAAACCG.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGAGAAGGGCGCTAAGAA.................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....GTTGAGAAGGGCGCTAAGAATTC..............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAGAAGGGCGCTAAGAATTCGCCGAGCT......................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGTTGAGAAGGGCGCTAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAGAATTCGCCGAGCTACAGC.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................C-----------------------GCATTGGGGGCCAAATG.............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGGGCGCTAAGAATTCGCCGAGCT......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CAAAC-------------TCGGTG--CAG----TTAATGCT....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................TAAGAATTCGCCGAGCTACAGCC................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGAATTCGCCGAGCTACAGCCTGTAT...........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAGAAGGGCGCTAAGAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............CGCTAAGAATTCGCCGAGCTACA...................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GAATTCGCCGAGCTACAGCCTGTAT...........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AACCGTTGAGAAGGGCGCTA.....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AGTGAGTAGAGTAG----C-----------------------GCAT..........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........AGGGCGCTAAGAATTCGCCGAGCTAC....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTCGCCGAGCTACAGCCTGTA............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATGT---------GAATGTGACCCGGCT----TA..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...............CGCTAAGAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AATTCGCCGAGCTACAGC.................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...CGTTGAGAAGGGCGCTAAGAATT...............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AATGT---------GAATGTGACCCGGCT----TAACC...........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................ATTCGCCGAGCTACAGCCTGTATTTC........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................CGCCGAGCTACAGCCTGTATTTCAAA.....................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAGAAGGGCGCTAAGAATTCG.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AACCGTTGAGAAGGGCGCTAA....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCGCTAAGAATTCGCCGAGCTACA...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTAAGAATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GAATTCGCCGAGCTACAGC.................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................GGTCAAACCGGACTCTGCTTA............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................AGCCTGTATTTCAGTGAGTAGAGT............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTCGCCGAGCTACAGCC................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACCGTTGAGAAGGGCGCTAAGAATTC..............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACCGTTGAGAAGGGCGCTAAGA..................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...CGTTGAGAAGGGCGCTAAGA..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AC-----CTAGAATTAG-TTGATCGG...........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................CATTGGGGGCCAAATGT---------G..................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AGAATTAG-TTGATCGGTACCGG-----A...............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..............GCGCTAAGAATTCGCCGAG........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTAG-TTGATCGGTACCGG-----AAT.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................AAGAATTCGCCGAGCTACAG..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCTAAGAATTCGCCGAGCTACA...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TCGGTACCGG-----AATGGTTATG......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............GCGCTAAGAATTCGCCGAGCT......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GAATTCGCCGAGCTACAGCCTGTATT..........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GAAGGGCGCTAAGAATTCGCCGAG........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCGCCGAGCTACAGCCTGTATTTCAAA.....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TTGGGGGCCAAATGT---------GAATGT.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....GTTGAGAAGGGCGCTAAGAATT...............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGAATTCGCCGAGCTACA...................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................GTAG----C-----------------------GCATTGGGGGCCAAATGT---------...................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................GCTAAGAATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCTAAGAATTCGCCGAGCTA.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................AGAGTAG----C-----------------------GCATTGGGGGC...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................ATTGGGGGCCAAATGT---------GAATGTG............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................AATTCGCCGAGCTACAGCCTGTATTT.........................................................................................................................................................................................................................................................................................................2611.0010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AGTGAGTAGAGTAG----C-----------------------GCATTGGGGG....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTCGCCGAGCTACAGCCTGT.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................TTAG-TTGATCGGTACCGG-----AATGGT..........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................GAATTCGCCGAGCTACAGCC................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CCGGACTCTGCTTATTTAAC------------------T...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAGAAGGGCGCTAAGAATT...............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................TCGCCGAGCTACAGCCTGT.............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACCGTTGAGAAGGGCGCTAA....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................AATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................AAGAATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTCGCCGAGCTACAGCCTGTATTTCAAAT....................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................ATTAG-TTGATCGGTACCGG-----AATGGTT.........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................C-----CTAGAATTAG-TTGATCGGTA.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................................................................................................................................GTACCGG-----AATGGTTATGCAACA.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.........GAAGGGCGCTAAGAATTCGCCGAGCT......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACCGTTGAGAAGGGCGCTAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGAGCAG----C-----------------------GCATTGGCGGCCGAATGT---------GAATGTGACCCGGCT----TAACCTTTT-ACTTCC------------G------CATTT-GCAAGTTACCCAAAC-------------TAAATG--CAG----TTACTGCAG-----CTAGAATTAG-TTGATCGGTACCGG-----ACTGATTATGCAACGGGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCA------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................CAAGAATTCGCCGAGCTACAGCCTGTA............................................................................................................................................................................................................................................................................................................2715.00500000023000000000
........................TTCGCCGAGCTACAGCCTGTATTTCAAA.....................................................................................................................................................................................................................................................................................................2814.00400000022000000000
..................CAAGAATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2513.00300000012000000000
...CGTTGAGAAGGGCGCCAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2612.00200000011000000000
................GCCAAGAATTCGCCGAGCTACAGCC................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
........................TTCGCCGAGCTACAGCCTGTATTTC........................................................................................................................................................................................................................................................................................................2511.00100000000100000000
..........................................................................................................................................................................................................................................................................................TCAAACCGGACTCTGCTTATT..........................................2111.00100100000000000000
......................AATTCGCCGAGCTACAGCCTGTATT..........................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...............................................TCAGTGAGTAGAGCAG----C-----------------------GCATT.........................................................................................................................................................................................................................................................2211.00100000000000001000
..................CAAGAATTCGCCGAGCTACAGCCTGTAT...........................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................GCCAAGAATTCGCCGAGCTACA...................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
......TGAGAAGGGCGCCAAGAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................GCCAAGAATTCGCCGAGCTACAGCCTGT.............................................................................................................................................................................................................................................................................................................2811.00100000000100000000
...................AAGAATTCGCCGAGCTACAGCCTGTAT...........................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.......................ATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2011.00110000000000000000
..................CAAGAATTCGCCGAGCTACAGCCTGTATT..........................................................................................................................................................................................................................................................................................................2911.00100000010000000000
...................AAGAATTCGCCGAGCTACAG..................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
....................AGAATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2311.00100000000000010000
....................AGAATTCGCCGAGCTACAGCCTGTATT..........................................................................................................................................................................................................................................................................................................2711.00100000000100000000
................GCCAAGAATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..................CAAGAATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2411.00100000001000000000
......................................................................................................CGAATGT---------GAATGTGA...........................................................................................................................................................................................................................15140.14200000020000000000
droSec2
AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGAGCAG----C-----------------------GCATTGGGGGCCGAATGT---------GAATGTGACCCGGCT----TAACCTTTT-GCTTCC------------G------CATTT-GCAAGTAACCCAAAC-------------AAGGTG--CAG----TTGCTGCAC-----CTTGAATTAG-TTGATCGGTACCGG-----ACTGATTACGCAACAGCTCAAACCGGACTCTTCTTATTTAAC------------------TCGTCGCA------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................ATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................1913.0030030
.......................ATTCGCCGAGCTACAGCC................................................................................................................................................................................................................................................................................................................1812.0020020
....................................................................................................................................................................................................................................................................................AACAGCTCAAACCGGACTCTTCTTAT...........................................2611.0011000
.....................GAATTCGCCGAGCTACAGCCTGT.............................................................................................................................................................................................................................................................................................................2311.0010010
......................AATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2011.0010010
...CGTTGAGAAGGGCGCCAAGAATTCGCC...........................................................................................................................................................................................................................................................................................................................2711.0010100
AACCGTTGAGAAGGGCGC.......................................................................................................................................................................................................................................................................................................................................1811.0010010
...CGTTGAGAAGGGCGCCAAGA..................................................................................................................................................................................................................................................................................................................................2011.0010100
..................CAAGAATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................2411.0010010
....GTTGAGAAGGGCGCCAAGAATTCGCC...........................................................................................................................................................................................................................................................................................................................2611.0010100
droYak3
AACCGTTGAGAAGGGCGCCAAAAATTCGCCGAGCTACAGCCTGTATTTCAGTAAGTAGAGCAG----C-----------------------GCATT---------------GGGTGCCGAATGTGACCCGGCT----TAACCCTTT-GCTTCC------------G------CATTT-GCAAGTTACCCAAAC-------------TGGGTG--CAG----TTACTGCAG-----CTAGCATTAG-TTGATTGCTACCGG-----GCTGATTATGCAACAAGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCA------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................ATTCGCCGAGCTACAGCCT...............................................................................................................................................................................................................................................................................................................1912.00202000000000
.......................ATTCGCCGAGCTACAGCCTG..............................................................................................................................................................................................................................................................................................................2011.00110000000000
................GCCAAAAATTCGCCGAGCT......................................................................................................................................................................................................................................................................................................................1911.00101000000000
................GCCAAAAATTCGCCGAGCTA.....................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............CGCCAAAAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................1911.00100000010000
........................TTCGCCGAGCTACAGCCTGTATTT.........................................................................................................................................................................................................................................................................................................2411.00100100000000
.................................................................................................................................................................................................................................................................CGG-----GCTGATTATGCAACAAGT..............................................................2111.00100000100000
.....................AAATTCGCCGAGCTACAGCCTGTATTTCAA......................................................................................................................................................................................................................................................................................................3011.00100000010000
droEre2
AACCGTTGAGAAGGGCGCCAAGAATTCGCCGAGCTACAGCCTGTATTTCAGTGAGTAGACCAT----C-----------------------GCAT----------------CGAGACCGAATGTGACCCGGCT----TAACCCTTC-GCTTCC------------G------CATTT-GCAAGTTACCCAAAC-------------TCGGTG--CAG----TTACTGCAC-----ATAGCATTAG-TTGATCGCTACCTG-----ACTGATTATGCAACAAGTCAAACCGGACTCTGCTTATTTAAC------------------TCGTCGCA------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......TGAGAAGGGCGCCAAGAATTCGCCGAGA.......................................................................................................................................................................................................................................................................................................................2816.0060000006
..................CAAGAATTCGCCGAGCTACAGCCTGT.............................................................................................................................................................................................................................................................................................................2611.0010000100
AACCGTTGAGAAGGGCGCCAAGAATTC..............................................................................................................................................................................................................................................................................................................................2711.0010100000
..........AAGGGCGCCAAGAATTCGCCGAGC.......................................................................................................................................................................................................................................................................................................................2411.0010000100
..........................CGCCGAGCTACAGCCTGTATT..........................................................................................................................................................................................................................................................................................................2111.0010000100
.........GAAGGGCGCCAAGAATTCGCCGAC........................................................................................................................................................................................................................................................................................................................2411.0010100000
.........GAAGGGCGCCAAGAATTCGC............................................................................................................................................................................................................................................................................................................................2011.0010000100
...............CGCCAAGAATTCGCCGAGCT......................................................................................................................................................................................................................................................................................................................2011.0010100000

Generated: 05/18/2015 at 12:20 AM