ID:

dps_1185

 Coordinate:

3:12356846-12356996 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.0 -5.7 -5.5

Flybase annnotation

exon [dpse_GLEANR_14105:1]; CDS [Dpse\GA15267-cds]; intron [Dpse\GA15267-in]

No Repeatable elements found

Sense Strand Reads

--------------------##############################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGGAGAACGTAACGGAACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTATTCCGCACATTATATTGATGCCCTACAAGTGCATTGTTGGCAAATTGCGGCGGTGTCGGTGTCGGTATCGCTTTAGGACGCCAATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAACGTGAATTCTGCTCTGCTACTGTTTGCGTGTGTGTGTGCTCTCGTGTGTTTGCGCCATTTTCGTTTTTCACATT
******************************************************************************************************************************************(((.((........)).)))....................................********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 M062
head
 GSM444067
head
 GSM343916
embryo
.............................................................................................................................................................................ATAACGTGAATTCTGCTCTGC......................................................... 21 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................................................................GTGTGTGTGCTCTCGAGTGTT........................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGGCAAATTGCGGCGGTGTT............................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
....................................TGCTGTATGCAAGGGTATTCC.................................................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................AGTGCCAAGAATGGGGGGCT............................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
............................CGAGGAGATGCTATATGCAAAGG........................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
.......ACGTAACGGAACCATGTCAAG............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................TTCTGCTCTGCTACTGTTTGC............................................... 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAATGCATACATAACGTG...................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.....GAACGTAACGGAACCATGTCAAGC.............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................TAGTGCCAAGAATGGGGGGCTA............................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0
.............................GAGGAGATGCTATATGCAAAGGG....................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................TGTCGGTATCGCTTTAGGACG...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................TGTCGGTGTCGGTATCGCTT............................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..........................AGCGAGGAGATGCTATATGCAAAGGG....................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................TACTGTTTGCGTGTGTGTG...................................... 19 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................CTACTGTTTGCGTGTGTGTGT..................................... 21 0 1 1.00 1 0 0 0 1 0 0
....................................................ATTCCGCACATTATATTGAT................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGGCAAATTGCGGCGGTGTCG............................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................GTCGGTGTCGGTATCGCTTTAGGACGCC.................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
GAGGAGAACGTAACGGAACCATGTCAAGC.............................................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................................................................CGTGAATTCTGCTCTGCTAC...................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................GTGCCAAGAATGGGGGGCTAT........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................GCTTCAGCACGCCGATAGT.............................................................................................................. 19 3 13 1.00 13 13 0 0 0 0 0
.................................................................TATTGATGCCCTACAAGTGCA..................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................GAATTCTGCTCTGGTCCTTTT.................................................. 21 3 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................................................................AATTCTGCTCTGGTCCTTTT.................................................. 20 3 17 0.29 5 5 0 0 0 0 0
............................................................................................................................................................................................................GTGTGTGTGTGCTCTCGAGTTT......................... 22 2 4 0.25 1 1 0 0 0 0 0
.................................................................................GTGCATTGTTGTCACATTG....................................................................................................................................................... 19 2 6 0.17 1 0 0 0 0 1 0
......................................................................................................................................................................TGCATACGTAATGTGAATT.................................................................. 19 2 6 0.17 1 1 0 0 0 0 0
.................................................................................GTGCATTGTAGGCCCATTGC...................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 1 0
...........................................................................................................ATCGGTGCCGGTATCGCT.............................................................................................................................. 18 2 13 0.08 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................CTCCCGTGTGTCTGCACCA................. 19 3 17 0.06 1 0 0 0 0 1 0
..................................GATGCCATATGCAAGGGGAT..................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................CAATAGTGTCAGGAATGGA.................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

CTCCTCTTGCATTGCCTTGGTACAGTTCGCTCCTCTACGATATACGTTTCCATAAGGCGTGTAATATAACTACGGGATGTTCACGTAACAACCGTTTAACGCCGCCACAGCCACAGCCATAGCGAAATCCTGCGGTTATCACGGTTCTTACCCCCCGATTATTTTTACGTATGTATTGCACTTAAGACGAGACGATGACAAACGCACACACACACGAGAGCACACAAACGCGGTAAAAGCAAAAAGTGTAA
*********************************************************(((.((........)).)))....................................****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
...................GTACAGTTCGCTCCTCTACGA................................................................................................................................................................................................................... 21 0 1 2.00 2 2
................................CTCTACGATATACGTTTCCAT...................................................................................................................................................................................................... 21 0 1 1.00 1 1
..CCTCTTGCATTGCCTTGGTAC.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1
...........................................................................................................CAGCCACAGCCATAGCGAAA............................................................................................................................ 20 0 1 1.00 1 1
............................................................................ATGTTCACGTAACAACCGTTT.......................................................................................................................................................... 21 0 1 1.00 1 1
....................................................................................................GCCGCCACAGCCACAGCCATA.................................................................................................................................. 21 0 1 1.00 1 1
...........TTGCCTTGGTACAGTTCGCTC........................................................................................................................................................................................................................... 21 0 1 1.00 1 1
................................................................................................................ACAGCCATAGCGAAATCCTGC...................................................................................................................... 21 0 1 1.00 1 1
..........ATTGCCTTGGTACAGTTCGCT............................................................................................................................................................................................................................ 21 0 1 1.00 1 1
.................................................................................................................CAGCCATAGCGAAATCCTGCG..................................................................................................................... 21 0 1 1.00 1 1
............................................................................................................AGCCACAGCCATAGCGAAAT........................................................................................................................... 20 0 1 1.00 1 1
..............CCTTGGTACAGTTCGCTCCTC........................................................................................................................................................................................................................ 21 0 1 1.00 1 1
........................................................................CGGGATGTTCACGTAACAACC.............................................................................................................................................................. 21 0 1 1.00 1 1
....................................................TAAGGCGTGTAATGTAACTAC.................................................................................................................................................................................. 21 1 1 1.00 1 1
........................................................................................................................................................................................AGACGAGACGATGACAAACGC.............................................. 21 0 1 1.00 1 1
.............................................................................................................................................................................................................................TCACAAACGCGGTGAAAGCAA......... 21 2 1 1.00 1 1
.CCCTCTTGCATTGCCTTGGTAC.................................................................................................................................................................................................................................... 22 1 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:12356796-12357046 - dps_1185 G-AGGAG------------------------------------AACGTAA-CG-GAACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCACA----T-----TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGT-----------------GTC-----GGTGT---CGGTATCGCTTTAGG----ACGC-------------------------CAATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACTG-------------------------------------T------TTG-------------CGTGTG------------------TG-TGT---GC-TCTCGTGTGTTTG-CGC--CATTTTC-GTT----TTTCACATT
droPer2 scaffold_44:538909-539159 - G-AGGAG------------------------------------AACGTAA-CG-GAACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCACA----T-----TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGT-----------------GTC-----GGTGT---CGGTATCGCTTTAGG----ACGC-------------------------CAATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACTG-------------------------------------T------TTG-------------CGTGTG------------------TG-TGT---GC-TCTCGTGTGTTTG-CGC--CATTTTC-GTT----TTTCACATT
droWil2 scf2_1100000004382:121342-121525 - A-AGTGGA-----------------------------------CCATCAT-CA-TCATCATGTCTAGCGAGGAGATATTATATGCTAAGGTA-----TTTGGCCCTTATAATA---ATTATTATTATCGGATGCCATACAAGTGCATTGTTGGCAAGAAGAGT--CAGTCAGATGTTGTTTGCTTGGTT-----GGTGG---GAGAATGGAGGGC----GCCCGC-------------------------CAATAGTGTTAAAAGCGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:17535119-17535409 + T-GGGCAC--------------------------------TCGGACAGGC-TG-TAATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACA--TTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGTTGGCA-ATTCC-G--CGCT-----------------GTT-----GTCGTCGTCG---TCGAGCCC-----------------------------AGCGCTCCATAGTGTTAAGAATTGG-GGCTTATAAAAACGCATACATAAT-AACA-------AT-AACAACGTGTGCTGCATGCATACGAGTGCATGTGCATGCGTATGTGTGTGTGTG-------TGTGTGTGT----------------------G---TGTG--TGTATGTGT--GTGGTGCAATAATTTC-CAT----TTTTGCATT
droMoj3 scaffold_6496:10481017-10481270 - -------------------------------------------------------AATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACACATTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGTTGGC-AATTGCG---CGCT-----------------GTT-----GTCGTCGTCG---TCG-TCGTCGTCGTCAGCTAGCC--------------------TCATAGTGTTAAGAATGGGAGGCTTATAAAAACGCATACATAAT-AACA-------AT-AACAACGTGCGATGCATGCA--------------------------------TGTGTGCTCTGTGTGTGTGTG------------------TG---TGTA--T----------GTG-CGC--CCATTTC-ATTTCGCTTTTGCATT
droGri2 scaffold_14441:3062-3356 + G-AGAAAA-------ACAGC--------------------------ACGC-TG-CAATCATGTCAAGCGAGGAGATGTTATACGCAAAGGTACA---TTACACATT----A-----TATATT-------GATGCCCCACAAGTGCATTGTTGGC-AATTGCTGCGCGCT-----------------GTC-----GTCGTCGTCG---TCGT-TGTTGTCG----CTGGCGTTTTACCTTTGCCAAGCGGCCAATAGTGTTAAGAATGGGGGGCTTATAAAAACGCATACATAAT-AACA-------AT-AACAACGTGCACTGTATATATAT----------------ATATATATAT--ATGTG-----TGTGTGTGT--G------------------TGT-GTGTT--T----------GTG-CGC--CAATTTC-ATT-----TTTGCATT
droAna3 scaffold_13266:16390341-16390554 - G-AGAAG------------------------------------GC-CAGG-AG-AAACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAATG--ATATATTGCTG-CTGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---CG----CGCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAA-ATTGCACCCATAGC-GTGATTTCTGT-----CG--G-------------------------------------T------GT-----------------ACG--------TGTTGT----TGT-GGGTG--T----------ATG------------------------------
droBip1 scf7180000395838:74507-74713 + GGAGGAG-----------------------------------------------AAACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAATG--ATATATTGCTG-CGGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---CG----CGCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAAAG-TGCACCCATAGC-GTGATTG-------------G-------------------------------------T------GTC-------GG----TGTACG--------TGTTAT----TGT-GGGTG--T----------ATG------------------------------
droKik1 scf7180000302385:951037-951261 + A-AGGAG------------------------------------GCGC-AGCGG-GAAAAATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACGTCCATCGTTGGATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGC-----------------GG-GTGTCGGTGT---C----------------G----C-------------------------TGACGGTGCCAA------------TATAAAA-TGCAACAATAACCGTGATTCC-GC---------G-------------------------------------T-------------------------GCTTGTGTTTGTGTTGAGGCATG---TGTG--T----------GTG-TGC--CATTTGCCGTT----CTTC---GC
droFic1 scf7180000453948:145245-145457 + G-ACGAGG-----------------------------------CCGCAAG-TGTAAACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----T-ACACAGT----AT---ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCCCCTGGCCAAAG-------------------------------------T------ATG-------------CGTGCCTG----------------TGT-AGGTG--T----------GTT-GGT--CATTTTCC-------------A--
droEle1 scf7180000491347:223057-223260 + G-AGG---------------------------------------AGCAAG-TG-GAACTATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAGT----ATA--ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCTTGGTCAATG-------------------------------------T------GTG-------------TGTGTG------------------TG---------T----------GAG-TGC--CATTTTCC-------------AGT
droRho1 scf7180000779868:21347-21592 - G-AAGAGAAGGAAAAGAAGCAGGCAGAGGAAGAGGAGGATTAGGAGCAAG-TG-GAACGATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----ATACACAGT----ATA--ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCTG-GTCAAAG-------------------------------------T------GTG-------------TGTGTG------------------TG---TGTC--T----------GTG-GGC--CATTTTCC-------------AGT
droBia1 scf7180000302292:2758329-2758521 - --AGAAG------------------------------------GAGCCAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GAGATTTT------------G-------------------------------------T------GTG-------------TGTGTT------------------CGT-GAGTG--T----------GCG-GGC--CACTCTC-----------------
droTak1 scf7180000412807:167120-167319 + G-AGGAG------------------------------------GAGCAAG-TG-GAACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCC----------G-------------------------------------T------GTG-------------TGTGCG------------------TGT-GTCTG--T----------GTG-GGC--CATTCTCC-------------AGG
droEug1 scf7180000409672:5403640-5403844 + G-AGG---------------------------------------AGCAAG-TG-GAACCATGTCTAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGTGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCT-G-CCCAAAG-------------------------------------TATTTGTTTG-------------------------------------TGT-GTGTG--T----------GTG-GGC--CATTTTCC-------------AGT
dm3 chr2R:3387963-3388178 + GGAGGAG------------------------------------GAGCCAG-TG-GAACCATGTCTAGCGAGGAGATGCTATACGCGCAGGTA-----TTGCACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCCG-TCCGAAG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GCA-GGC--CATTCGAC-------------AGT
droSim2 2r:4211209-4211418 + dsi_19675 GGAGGAG------------------------------------GAGCCAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCCT-ACCAAAG-------------------------------------T------GTG-------------TGTGTG------------------TGT-GAGTG--T----------GCG-GGC--CATTTGCC-------------AGT
droSec2 scaffold_1:1045129-1045342 + dse_612 GGAGGAG------------------------------------GAGCCAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCCT-ACCAAAG-------------------------------------TGTGT--GTG-------------TGTGTG------------------TGT-GAGTG--T----------GCT-GGC--CATTTGCC-------------AGT
droYak3 2L:16065964-16066165 + G-AGGAG------------------------------------GAGCTAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----AGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCG--TCCGAGC-------------------------------------T-------------------------GCG------------------TGT-GAGTG--T----------ACG-GGC--CATTTGCC-------------AGT
droEre2 scaffold_4929:19210323-19210515 - G-AGGAG------------------------------------GAGCCAG-TG-GAACCATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTTCACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCG--TCCGAAC-------------------------------------T---------------------------G------------------TGT-GAGTG--T----------GCG-GGC--CATT--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
G-AGGAG------------------------------------AACGTAA-CG-GAACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCACA----T-----TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGT-----------------GTC-----GGTGT---CGGTATCGCTTTAGG----ACGC-------------------------CAATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACTG-------------------------------------T------TTG-------------CGTGTG------------------TG-TGT---GC-TCTCGTGTGTTTG-CGC--CATTTTC-GTT----TTTCACATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................ATAAC-GTGAATTCTGCTCTGC................................................................................................................................................2112.0020200000000
......................................................................................................................................................TGGCAAATTGCGG--CGGT-----------------GTT-----.....................................................................................................................................................................................................................................................................2011.0010000001000
..............................................................................................................................................................................................................................................................AGTGCCAAGAATGGGGGGCT.....................................................................................................................................................................................2011.0010000001000
...................................................................CGAGGAGATGCTATATGCAAAGG.............................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................................ACGTAA-CG-GAACCATGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
............................................................................................................................................................................................................................................................................................................TTCTGCTCTGCTACTG-------------------------------------T------TTG-------------C..............................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................AAAAATGCATACATAAC-GTG.............................................................................................................................................................2011.0010100000000
......G------------------------------------AACGTAA-CG-GAACCATGTCAAGC...................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................TAGTGCCAAGAATGGGGGGCTA....................................................................................................................................................................................2211.0010000001000
....................................................................GAGGAGATGCTATATGCAAAGGG............................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................................................................................................TGT---CGGTATCGCTTTAGG----ACG.......................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................T-----------------GTC-----GGTGT---CGGTATCGCTT..................................................................................................................................................................................................................................................2011.0010100000000
.................................................................AGCGAGGAGATGCTATATGCAAAGGG............................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................TACTG-------------------------------------T------TTG-------------CGTGTG------------------TG-TG..................................................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................CTACTG-------------------------------------T------TTG-------------CGTGTG------------------TG-TGT---..............................................2111.0010001000000
...........................................................................................A-----TTCCGCACA----T-----TATATT-------GAT...................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................TGGCAAATTGCGG--CGGT-----------------GTC-----G....................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................GTC-----GGTGT---CGGTATCGCTTTAGG----ACGC-------------------------C............................................................................................................................................................................................................2811.0010100000000
G-AGGAG------------------------------------AACGTAA-CG-GAACCATGTCAAGC...................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
.....................................................................................................................................................................................................................................................................................................C-GTGAATTCTGCTCTGCTAC.............................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................GTGCCAAGAATGGGGGGCTAT...................................................................................................................................................................................2111.0010100000000
......................................................................................................................TATT-------GATGCCCTACAAGTGCA.....................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
G-AGGAG------------------------------------AACGTAA-CG-GAACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCACA----T-----TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGT-----------------GTC-----GGTGT---CGGTATCGCTTTAGG----ACGC-------------------------CAATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACTG-------------------------------------T------TTG-------------CGTGTG------------------TG-TGT---GC-TCTCGTGTGTTTG-CGC--CATTTTC-GTT----TTTCACATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....AG------------------------------------AACGTAA-CG-GAACCATGT........................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
.............................................................................................................................................................................................................TATCGCTTTAGG----ACGC-------------------------CAATAA.......................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................G-TGT---GC-TCTCGTGTGTTTG-CG...........................2111.001000001
......G------------------------------------AACGTAA-CG-GAACCATGTCAAGCGA.................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....................................................................................................................................................GTTGGCAAATTGCGG--CGGT-----------------G............................................................................................................................................................................................................................................................................2011.001010000
....................................................................GAGGAGATGCTATATGCAAAGGG............................................................................................................................................................................................................................................................................................................................................................................2311.001001000
......................................................................................................................................................................................................T---CGGTATCGCTTTAGG----ACGC-------------------------C............................................................................................................................................................................................................2111.001010000
G-AGGAG------------------------------------AACGTAA-CG-GAAC.............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................................................................................................................................................................GT-----------------GTC-----GGTGT---CGGTATCGCT...................................................................................................................................................................................................................................................2011.001000001
droWil2
A-AGTGGA-----------------------------------CCATCAT-CA-TCATCATGTCTAGCGAGGAGATATTATATGCTAAGGTA-----TTTGGCCCTTATAATA---ATTATTATTATCGGATGCCATACAAGTGCATTGTTGGCAAGAAGAGT--CAGTCAGATGTTGTTTGCTTGGTT-----GGTGG---GAGAATGGAGGGC----GCCCGC-------------------------CAATAGTGTTAAAAGCGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................GATATTATATGCTAAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................1922.50540010
....................................................................GAGGAGATATTATATGCTAAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2412.00200110
........................................................................AGATATTATATGCTAAGGTA-----T.....................................................................................................................................................................................................................................................................................................................................................................2111.00101000
............................................CATCAT-CA-TCATCATGTCT......................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000
droVir3
T-GGGCAC--------------------------------TCGGACAGGC-TG-TAATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACA--TTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGTTGGCA-ATTCC-G--CGCT-----------------GTT-----GTCGTCGTCG---TCGAGCCC-----------------------------AGCGCTCCATAGTGTTAAGAATTGG-GGCTTATAAAAACGCATACATAAT-AACA-------AT-AACAACGTGTGCTGCATGCATACGAGTGCATGTGCATGCGTATGTGTGTGTGTG-------TGTGTGTGT----------------------G---TGTG--TGTATGTGT--GTGGTGCAATAATTTC-CAT----TTTTGCATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......AC--------------------------------TCGGACAGGC-TG-TAATC............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000100000
........................................................................AGATGCTATACGCAAAGGGT...........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......................................................AATCATGTCAAGCGAGGAGATGCT........................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
..GGGCAC--------------------------------TCGGACAGGC-TG-.................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
..................................................................GCGAGGAGATGCTATACGCAG................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
........................................TCGGACAGGC-TG-TAATCATGTC.......................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000010000
.................................................................AGCGAGGAGATGCTATACGCA.................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
.............................................................GTCAAGCGAGGAGATGCT........................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................GTG-------TGTGTGTGT----------------------G---TGTG--TG..........................................19200.459000000000000000000000000000000000000000000000000000000000000090
.................................................................................................................................................................................................................................................................................................................................................................................................................G---TGTG--TGTATGTGT--GTGGTG...........................2050.201000000010000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CATGCGTATGTGTGTGTGTG-------T....................................................................................2190.111000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TG-------TGTGTGTGT----------------------G---TGTG--TGTAT.......................................21200.051000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGTGTGT----------------------G---TGTG--TGTATGTG....................................20200.051000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GTATGTGTGTGTGTG-------TGTGTGTGT----------------------......................................................24200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
-------------------------------------------------------AATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACACATTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGTTGGC-AATTGCG---CGCT-----------------GTT-----GTCGTCGTCG---TCG-TCGTCGTCGTCAGCTAGCC--------------------TCATAGTGTTAAGAATGGGAGGCTTATAAAAACGCATACATAAT-AACA-------AT-AACAACGTGCGATGCATGCA--------------------------------TGTGTGCTCTGTGTGTGTGTG------------------TG---TGTA--T----------GTG-CGC--CCATTTC-ATTTCGCTTTTGCATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................GTCAAGCGAGGAGATGCTATAC....................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droGri2
G-AGAAAA-------ACAGC--------------------------ACGC-TG-CAATCATGTCAAGCGAGGAGATGTTATACGCAAAGGTACA---TTACACATT----A-----TATATT-------GATGCCCCACAAGTGCATTGTTGGC-AATTGCTGCGCGCT-----------------GTC-----GTCGTCGTCG---TCGT-TGTTGTCG----CTGGCGTTTTACCTTTGCCAAGCGGCCAATAGTGTTAAGAATGGGGGGCTTATAAAAACGCATACATAAT-AACA-------AT-AACAACGTGCACTGTATATATAT----------------ATATATATAT--ATGTG-----TGTGTGTGT--G------------------TGT-GTGTT--T----------GTG-CGC--CAATTTC-ATT-----TTTGCATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTGT--G------------------TGT-GTGTT--T----------GTG-.............................19200.05101
droAna3
G-AGAAG------------------------------------GC-CAGG-AG-AAACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAATG--ATATATTGCTG-CTGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---CG----CGCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAA-ATTGCACCCATAGC-GTGATTTCTGT-----CG--G-------------------------------------T------GT-----------------ACG--------TGTTGT----TGT-GGGTG--T----------ATG------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................GTGT---CG----CGCTCTTGGACGCCA........................................................................................................................................................................................................................................2111.001100000
..........................................................CATGTCGAGCGAGGAGATGTTG.......................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
GGAGGAG-----------------------------------------------AAACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAATG--ATATATTGCTG-CGGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---CG----CGCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAAAG-TGCACCCATAGC-GTGATTG-------------G-------------------------------------T------GTC-------GG----TGTACG--------TGTTAT----TGT-GGGTG--T----------ATG------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A-AGGAG------------------------------------GCGC-AGCGG-GAAAAATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACGTCCATCGTTGGATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGC-----------------GG-GTGTCGGTGT---C----------------G----C-------------------------TGACGGTGCCAA------------TATAAAA-TGCAACAATAACCGTGATTCC-GC---------G-------------------------------------T-------------------------GCTTGTGTTTGTGTTGAGGCATG---TGTG--T----------GTG-TGC--CATTTGCCGTT----CTTC---GCSizeHit CountTotal NormTotal
No Reads
droFic1
G-ACGAGG-----------------------------------CCGCAAG-TGTAAACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----T-ACACAGT----AT---ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCCCCTGGCCAAAG-------------------------------------T------ATG-------------CGTGCCTG----------------TGT-AGGTG--T----------GTT-GGT--CATTTTCC-------------A--SizeHit CountTotal NormTotal
No Reads
droEle1
G-AGG---------------------------------------AGCAAG-TG-GAACTATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAGT----ATA--ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCTTGGTCAATG-------------------------------------T------GTG-------------TGTGTG------------------TG---------T----------GAG-TGC--CATTTTCC-------------AGTSizeHit CountTotal NormTotal
No Reads
droRho1
G-AAGAGAAGGAAAAGAAGCAGGCAGAGGAAGAGGAGGATTAGGAGCAAG-TG-GAACGATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----ATACACAGT----ATA--ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCTG-GTCAAAG-------------------------------------T------GTG-------------TGTGTG------------------TG---TGTC--T----------GTG-GGC--CATTTTCC-------------AGTSizeHit CountTotal NormTotal
No Reads
droBia1
--AGAAG------------------------------------GAGCCAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GAGATTTT------------G-------------------------------------T------GTG-------------TGTGTT------------------CGT-GAGTG--T----------GCG-GGC--CACTCTC-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
G-AGGAG------------------------------------GAGCAAG-TG-GAACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCC----------G-------------------------------------T------GTG-------------TGTGCG------------------TGT-GTCTG--T----------GTG-GGC--CATTCTCC-------------AGGSizeHit CountTotal NormTotal
No Reads
droEug1
G-AGG---------------------------------------AGCAAG-TG-GAACCATGTCTAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGTGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCT-G-CCCAAAG-------------------------------------TATTTGTTTG-------------------------------------TGT-GTGTG--T----------GTG-GGC--CATTTTCC-------------AGTSizeHit CountTotal NormTotal
No Reads
dm3
GGAGGAG------------------------------------GAGCCAG-TG-GAACCATGTCTAGCGAGGAGATGCTATACGCGCAGGTA-----TTGCACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCCG-TCCGAAG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GCA-GGC--CATTCGAC-------------AGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....AG------------------------------------GAGCCAG-TG-GAACCATGTCG......................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG-------------TGTGTG------------------TGT-GTGTG--............................................24202.955900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005700002000000
.........................................................................................................................................................................................................................................................................................................................AAG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTG................................................25202.905800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000010600000000000003000000000000001004400000000000
....GAG------------------------------------GAGCCAG-TG-GAACCATGT........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTGT---C----------------GTCTGC-------------------------AAATGGTGCC...................................................................................................................................................................................................2112.0020000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAG------------------------------------GAGCCAG-TG-GAACCA...........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................................AGCGAGGAGATGCTATACGCGC................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGTG------------------TGT-GTGTG--T----------GCA-GGC--CATTCGA.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................AGATTGCGG--CGGT-----------------GTC-----GGTGT---.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................AAGTGCATCGT-GGCAGAT.........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................ATGGTGCCAA------------TATAAAATCGC..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AG------------------------------------GAGCCAG-TG-GAACCATGT........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AG-TG-GAACCATGTCTAGC...................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
......G------------------------------------GAGCCAG-TG-GAACCATGT........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................GGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAA..........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGAGGAG------------------------------------GAGCCAG-TG-GAACCATG.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ATGTCTAGCGAGGAGATGC.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................GAGGAGATGCTATACGCGC................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TAAC-GTGATTTCCCCCG-TCCG..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GAGCCAG-TG-GAACCATGTCG......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GGCAGATTGCGG--CGGT-----------------GTC-----GGT..................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................GCGAGGAGATGCTATACGCGCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
GGAGGAG------------------------------------GAGCCAG-TG-GAACC............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GCAGATTGCGG--CGGT-----------------GTC-----GGT..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................GAGGAGATGCTATACGCGCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................................AGATGCTATACGCGCAGGGC-----G.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..AGGAG------------------------------------GAGCCAG-TG-GAACCATGT........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGAG------------------------------------GAGCCAG-TG-GAACCATGT........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AG------------------------------------GAGCCAG-TG-GAACCATGTT.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GATGCTATACGCGCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................G-TG-GAACCATGTCTAGCGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................GAGGAGATGCTATACGCGCAG..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------A............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................C----------------GTCTGC-------------------------AAATGGTGCCAA------------.....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTGCACAGT----A-----TATATT-------GATG..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGT-GTGTG--T----------GCA-GGC--CATTCGAC-------------AG.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CCCG-TCCGAAG-------------------------------------TGTGTGTGTG-------------T..............................................................................2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AA------------TATAAAATCGCACCCATAAC-GTGAT...........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......G------------------------------------GAGCCAG-TG-GAACCATGTCG......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................C-----GGTGT---C----------------GTCTGC-------------------------AAATGGTG.....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ACCATGTCTAGCGAGGAGAT...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................G-TG-GAACCATGTCTAGCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................TACAAGTGCATCGT-GGCAGATTGCGG--C.................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GC...............................25200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000010000800000000000
...........................................GAGCCAG-TG-GAACCATGTCGGC....................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTG................................................24200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002001000000000030100000000
....................................................................................................................................................................................................................................................................................................................................................................GTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GCA-.............................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000500020000000
.......................................................................................................................................................................................................................................................................................................................CGAAG-------------------------------------TGTGTGTGTG-------------TGTGT..........................................................................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTGT...............................................26200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000400000000000
...................................................................................................................................................................................................................................................................................................................................................................TGTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GCA-.............................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000100020000000000
.............................................................................................................................................................TTGCGG--CGGT-----------------GTC-----GGTGG---G----------------............................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTGTG--............................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000
.........................................................................................................................................................................................................................................................................................................................AAG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTGTG--............................................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000300000000000
..................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GC...............................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000010000
.....................................................................................................................................................................................................................................................................................................................................................................TGTGTG-------------TGTGTG------------------TGT-GTGT...............................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TGTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------G................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000200000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GCA-.............................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................GTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GC...............................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................TGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------GC...............................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
....................................................................................................................................................................................................................................................................................................................................................................GTGTGTG-------------TGTGTG------------------TGT-GTGTG--T----------G................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................AG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-GTGT...............................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
.........................................................................................................................................................................................................................................................................................................................AAG-------------------------------------TGTGTGTGTG-------------TGTGTG------------------TGT-G..................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TG-------------TGTGTG------------------TGT-GTGTG--T----------GCA-GG...........................22180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
GGAGGAG------------------------------------GAGCCAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCCT-ACCAAAG-------------------------------------T------GTG-------------TGTGTG------------------TGT-GAGTG--T----------GCG-GGC--CATTTGCC-------------AGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................GAGGAGATGCTATACGCTCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000000000
......................................................GAACCATGTCGAGCGAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...........................................................ATGTCGAGCGAGGAGATGCT........................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
...........................................................ATGTCGAGCGAGGAGATGCG........................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
......................................................GAACCATGTCGAGCGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...................................................................CGAGGAGATGCTATACGCTCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
...............................................CAG-TG-GAACCATGTCGAGC...................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.........................................................................GATGCTATACGCTCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................1921.00202000000000000000
..................................................................................................................................................................................................GGTGT---C----------------GTCTGC-------------------------AAATGGTG.....................................................................................................................................................................................................2011.00100000010000000000
......................................................................GGAGATGCTATACGCTCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.......................................................AACCATGTCGAGCGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
........................................................ACCATGTCGAGCGAGGAGATGCG........................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..............................................CCAG-TG-GAACCATGTCGAGCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
........................................................................................GGTA-----TTACACAGT----A-----TATA...............................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
droSec2
GGAGGAG------------------------------------GAGCCAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCCT-ACCAAAG-------------------------------------TGTGT--GTG-------------TGTGTG------------------TGT-GAGTG--T----------GCT-GGC--CATTTGCC-------------AGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................CAG-TG-GAACCATGTCGAGC...................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...................................................................CGAGGAGATGCTATACGCTCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.................................................G-TG-GAACCATGTCGAGCGAGGAGATGCT........................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
...............................................................CGAGCGAGGAGATGCTATACGCT.................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...........................................................................................................................................AAGTGCATCGT-GGCAGATT........................................................................................................................................................................................................................................................................................................1911.0010001
..............................................CCAG-TG-GAACCATGTCGAGC...................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................................................CGAGCGAGGAGATGCTATACG...................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................TC-----GGTGT---C----------------GTCTGC-------------------------AAATGGT......................................................................................................................................................................................................2111.0010010
droYak3
G-AGGAG------------------------------------GAGCTAG-TG-GAACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----AGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCG--TCCGAGC-------------------------------------T-------------------------GCG------------------TGT-GAGTG--T----------ACG-GGC--CATTTGCC-------------AGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................GTCGAGCGAGGAGATGCTATACGCGCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................3116.00600000000006
....................................................................GAGGAGATGCTATACGCGCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
.................................................G-TG-GAACCATGTCGAGCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................GAACCATGTCGAGCGAGGAGATGCTATAC....................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.......................................................................GAGATGCTATACGCGCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................................................GAACCATGTCGAGCGAGGAGATGC.........................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............................................AGCTAG-TG-GAACCATGTCGAGCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
droEre2
G-AGGAG------------------------------------GAGCCAG-TG-GAACCATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTTCACAGT----A-----TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGT-----------------GTC-----GGTGT---C----------------GTCTGC-------------------------AAATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCG--TCCGAAC-------------------------------------T---------------------------G------------------TGT-GAGTG--T----------GCG-GGC--CATT--------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................G-GAACCATGTCAAGCGAGGAGATGCT........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
........................................................................AGATGCTATACGCGCAGGGC-----......................................................................................................................................................................................................................................................................................................................................................................2011.0010000010

Generated: 05/18/2015 at 12:09 AM