ID:

dps_1133

 Coordinate:

3:9794823-9794973 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.7 -28.6 -28.4

Flybase annnotation

exon [dpse_GLEANR_14274:8]; CDS [Dpse\GA24314-cds]; snoRNA [Dpse\snoRNA:GA29843-RA]; exon [Dpse\snoRNA:GA29843:1]; intron [Dpse\GA24314-in]

No Repeatable elements found

Sense Strand Reads

########################################################################################################-------------------------------------------------------------------------------------------------##################################################
TGATGACAATTTGTTAGTTTGCTAGATCAAGTGGGAACGGGGCGTCTTATCCATGTGGTTGGTCTATGACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGCTATGATAGCAGCACTAAGCACTATCCTCCTAGTTTTAAGCTTAATCTCGCTGTAATTGACACTTTTTCGTCCTTGTGTGTCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCA
**************************************************.((((((((.((((........(((...(((...)))....)))........))))..))))).)))...(((((..(((((((((......)))).....))))).....)))))....(((((..............))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 V112
male body		 GSM343916
embryo
 SRR902012
CNS imaginal disc
 GSM444067
head
 M062
head
...................................AACGGGGCGTCTTATCCATGTGGT................................................................................................................................................................................................ 24 0 2 21.50 43 20 1 16 2 0 3 1
..................TTGCTAGATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 23 0 2 17.50 35 20 6 1 2 5 1 0
..................TTGCTAGATCAAGTGGGAACGG................................................................................................................................................................................................................... 22 0 2 16.00 32 20 5 2 5 0 0 0
..................................................................................ATTGAAAACGCTCCTTACACGA................................................................................................................................................... 22 0 1 16.00 16 15 1 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAACGGGG................................................................................................................................................................................................................. 24 0 2 13.00 26 13 4 5 2 2 0 0
...................................AACGGGGCGTCTTATCCATGTGG................................................................................................................................................................................................. 23 0 2 9.50 19 13 1 5 0 0 0 0
.................................................................................CATTGAAAACGCTCCTTACACGA................................................................................................................................................... 23 0 1 9.00 9 8 1 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 25 0 2 8.50 17 9 4 0 0 3 0 1
..................TTGCTAGATCAAGTGGGAACGGGGCGTC............................................................................................................................................................................................................. 28 0 2 5.00 10 6 2 1 0 1 0 0
...................TGCTAGATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 22 0 2 5.00 10 9 0 1 0 0 0 0
...................TGCTAGATCAAGTGGGAACGG................................................................................................................................................................................................................... 21 0 2 4.50 9 8 0 0 0 1 0 0
..................TTGCTAGATCAAGTGGGA....................................................................................................................................................................................................................... 18 0 2 4.50 9 6 0 0 3 0 0 0
....................................................................................TGAAAACGCTCCTTACACGA................................................................................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAA...................................................................................................................................................................................................................... 19 0 2 3.50 7 4 2 0 1 0 0 0
..............................................................................TCACATTGAAAACGCTCCTTAC....................................................................................................................................................... 22 0 1 3.00 3 2 0 1 0 0 0 0
.................TTTGCTAGATCAAGTGGGAACGG................................................................................................................................................................................................................... 23 0 2 3.00 6 6 0 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAACG.................................................................................................................................................................................................................... 21 0 2 2.50 5 4 0 0 1 0 0 0
..................TTGCTAGATCAAGTGGGAACGGGGCGT.............................................................................................................................................................................................................. 27 0 2 2.50 5 4 0 1 0 0 0 0
..................TTGCTAAATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 23 1 2 2.50 5 4 0 0 1 0 0 0
.............................................................................ATCACATTGAAAACGCTCCTTACACGAC.................................................................................................................................................. 28 0 1 2.00 2 0 0 0 0 2 0 0
....................................ACGGGGCGTCTTATCCATGTGGT................................................................................................................................................................................................ 23 0 2 2.00 4 4 0 0 0 0 0 0
...........................................GTCTTATCCATGTGGTTGGTCTATGAC..................................................................................................................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0 0
...................TGCTAGATCAAGTGGGAACGGGGCGTC............................................................................................................................................................................................................. 27 0 2 2.00 4 2 0 2 0 0 0 0
......................................................................................AAAACGCTCCTTACACGA................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0
...................................AACGGGGCGTCTTATCCATGTG.................................................................................................................................................................................................. 22 0 2 2.00 4 1 0 2 0 0 1 0
...................................AACGGGGCGTCTTATCCATGTGGTT............................................................................................................................................................................................... 25 0 2 2.00 4 1 0 2 0 0 0 1
..................TTGCTAAATCAAGTGGGAACGG................................................................................................................................................................................................................... 22 1 2 2.00 4 3 1 0 0 0 0 0
...................TGCTAGATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 24 0 2 1.50 3 2 0 0 1 0 0 0
.................TTTGCTAGATCAAGTGGGAACGGGG................................................................................................................................................................................................................. 25 0 2 1.50 3 2 1 0 0 0 0 0
..................TTGCTAAATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 25 1 2 1.50 3 0 2 0 0 0 1 0
...................TGCTAGATCAAGTGGGAACGGGG................................................................................................................................................................................................................. 23 0 2 1.50 3 3 0 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAAC..................................................................................................................................................................................................................... 20 0 2 1.50 3 2 1 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 26 0 2 1.50 3 2 1 0 0 0 0 0
.................................................................................CATTGAAAACGCGCCTTACACTC................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
................................................................................ACATTGAAAACGCTCCTTACACGA................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................TCACATTGAAAACGCTCCTTACA...................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................AGAAGGAGGTGGAGAAGCA 19 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCGGCCGTTCCTGCTGCGACG........................ 22 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................ATCACATTGAAAACGCTCCTTACACGA................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
.........................ATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 18 0 2 1.00 2 1 1 0 0 0 0 0
.............................................................................................................................................................................................GTGTCCTTGCAGGTGATTCGGCCGTTCCT................................. 29 0 1 1.00 1 0 0 1 0 0 0 0
...............AGTTTGCTAGATCAAGTGG......................................................................................................................................................................................................................... 19 0 2 1.00 2 2 0 0 0 0 0 0
..................TTGCTAAATCAAGTGGGAACG.................................................................................................................................................................................................................... 21 1 2 1.00 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................................CGGCCGTTCCTGCTGCGAC......................... 19 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................TCACATTGAAAACGCTCCTTACACGAC.................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAACG.................................................................................................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0 0 0
.................................................................................CATTGAAAACGCTCCTTACA...................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...................................AACGGGGCGTCTTATCCATG.................................................................................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0
...............................................................................CACATTGAAAACGCTCCTTACA...................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................ACCAAGCTAATCACATTGAAAACGCTCCT.......................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAACGGGGCG............................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0 0 0
...................................................................................TTGAAAACGCTCCTTACACG.................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAACGGGGCGT.............................................................................................................................................................................................................. 28 0 2 1.00 2 2 0 0 0 0 0 0
..........................................................................CTAATCACATTGAAAACGCTCCT.......................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................ATTGAAAACGCTCCTTACA...................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................CTTACACGACCTCACCGCTA........................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................TCACATTGAAAACGCTCCTTACACGA................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAAC..................................................................................................................................................................................................................... 21 0 2 1.00 2 2 0 0 0 0 0 0
........................................GGCGTCTTATCCATGTGGTTGGTCT.......................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0
...................TGCTAGATCAAGTGGGAAC..................................................................................................................................................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0 0
.....................CTAGATCAAGTGGGAACGGGG................................................................................................................................................................................................................. 21 0 2 0.50 1 0 1 0 0 0 0 0
....................................ACGGGGCGTCTTATCCATGTGG................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0
..........................................CGTCTTATCCATGTGGTTGG............................................................................................................................................................................................. 20 0 2 0.50 1 0 0 0 1 0 0 0
...................TGCTAGATCAAGTGGGAACGGGGA................................................................................................................................................................................................................ 24 1 2 0.50 1 0 0 0 1 0 0 0
..................TTGCTAGATCAAGTGGGAACGGGGA................................................................................................................................................................................................................ 25 1 2 0.50 1 0 0 0 0 1 0 0
.......................AAATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 18 1 2 0.50 1 1 0 0 0 0 0 0
..............................GTGGGAACGGGGCGTCTTATCC....................................................................................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0
...............AGTTTGCTAGATCAAGTG.......................................................................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0
..........................................CGTCTTATCCATGTGGTTGGTCT.......................................................................................................................................................................................... 23 0 2 0.50 1 0 0 0 1 0 0 0
...................................AACGGGGCGTCTTATCCATGTGGC................................................................................................................................................................................................ 24 1 2 0.50 1 0 0 0 0 0 0 1
.......................AAATCAAGTGGGAACGGGAC................................................................................................................................................................................................................ 20 2 2 0.50 1 0 0 0 1 0 0 0
................GTTTGCTAAATCAAGTGGGAA...................................................................................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................CTAAATCAAGTGGGAACGGGG................................................................................................................................................................................................................. 21 1 2 0.50 1 0 0 0 1 0 0 0
.................................GGAACGGGGCGTCTTATCCA...................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
...................................AACGGGGCGCCTTATCCATGTGGT................................................................................................................................................................................................ 24 1 2 0.50 1 0 0 0 0 0 1 0
..................TTCCTAGATCAAGTGGGAACG.................................................................................................................................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0 0
...........................CAAGTGGGAACGGGGCGTCTTATCCA...................................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0
................GTTTGCTAGATCAAGTGGGAACGGGG................................................................................................................................................................................................................. 26 0 2 0.50 1 0 0 1 0 0 0 0
...................TGCTAAATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0
..................TTGCTAGATCAAGCTGGA....................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 1 0 0 0
...................TGCTAAATCAAGTGGGAACGGGG................................................................................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0 0 0 0
..................TTGCTAGGTCAAGTGGGAACGG................................................................................................................................................................................................................... 22 1 2 0.50 1 0 0 0 1 0 0 0
.......................AGATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAACGGGGCGTCT............................................................................................................................................................................................................ 29 0 2 0.50 1 0 1 0 0 0 0 0
............................AAGTGGGAACGGGGCGTC............................................................................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0 0 0 0
..................TTGCTAGATCAAGTGGGAACGGC.................................................................................................................................................................................................................. 23 1 2 0.50 1 0 1 0 0 0 0 0
...................................AACGGGGCGTCTTATCCATGT................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
.........................ATCAAGTGGGAACGGGGCGTCT............................................................................................................................................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0
....................GCTAGATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0
................GTTTGCTAAATCAAGTGGGAACGGG.................................................................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0
...............AGTTTGCTAGATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 28 0 2 0.50 1 0 1 0 0 0 0 0
.GATGACAATTTGTTAGTTTGCTAGATC............................................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0
.................TTTGCTAAATCAAGTGGGAACGG................................................................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
......................................GGGGCGTCTTATCCATGTGGTTGGTC........................................................................................................................................................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0
....................................ACGGGGCGTCTTATCCATG.................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAA...................................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
...........................................GGCTTATCCATGTGGTTGG............................................................................................................................................................................................. 19 1 2 0.50 1 0 1 0 0 0 0 0
..................................GAACGGGGCGTCTTATCCATGTG.................................................................................................................................................................................................. 23 0 2 0.50 1 0 1 0 0 0 0 0
...................TGCTAGATCAAGTGGGAA...................................................................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0
.........................................GCGTCTTATCCATGTGGTTGGTC........................................................................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0
...................TGCTAAATCAAGTGGGAACGGGGCGTCT............................................................................................................................................................................................................ 28 1 2 0.50 1 1 0 0 0 0 0 0
................GTTTGCTAGATCAAGTGGG........................................................................................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0
.....................................CGGGGCGTCTTATCCATGTGGTTGGTC........................................................................................................................................................................................... 27 0 2 0.50 1 0 0 0 0 0 0 1
................GTTTGCTAGATCAAGTGGGAACGG................................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
..................TTGCTAAATCAAGTGGGAACGGGGCGTC............................................................................................................................................................................................................. 28 1 2 0.50 1 0 0 0 0 0 0 1
....................GCTAGATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0 0 0
..................TTGCTAGCTCAAGTGGGTTCGGG.................................................................................................................................................................................................................. 23 3 2 0.50 1 0 0 0 1 0 0 0
...........................................GTCTTATCCATGTGGTTGG............................................................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0
................GTTTGCTAGATCAAGTGGGAACG.................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
........................GATCAAGTGGGAACGGGGC................................................................................................................................................................................................................ 19 0 2 0.50 1 0 0 1 0 0 0 0
..ATGACAATTTTTTAGTTTGCC.................................................................................................................................................................................................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0
..................TTGCTAGATCCAGTGGGAACGGGGC................................................................................................................................................................................................................ 25 1 2 0.50 1 0 1 0 0 0 0 0
..........................TCAAGTGGGAACGGGGCGT.............................................................................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0
...................TGCTAGATCAAGTGGGAACGGGGCG............................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0
...............................................TATCCATGTGGTTGGTCT.......................................................................................................................................................................................... 18 0 2 0.50 1 0 0 0 1 0 0 0
..................TTGCTAAATCAAGTGGGA....................................................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0
.GATGACAATTTGTTAGTTTGCTAG.................................................................................................................................................................................................................................. 24 0 2 0.50 1 0 0 1 0 0 0 0
....................................ACGGGGCGTCTTATCCATGTGGTT............................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
.....................CCAGATCAAGTGGGAACGGGAC................................................................................................................................................................................................................ 22 2 2 0.50 1 0 1 0 0 0 0 0
..................................GAACGGGGCGGCTTATCCATGTG.................................................................................................................................................................................................. 23 1 2 0.50 1 0 0 0 1 0 0 0
...............AGTTTGCTAGATCAAGTGGGAA...................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAACGGGGCG............................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
..............TAGTTTGCTAGATCAAGTGA......................................................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
.................TTTGCTAGATCAAGTGGGAG...................................................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
................GTTTGCTAGATCAAGTGG......................................................................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0
..............TAGTTTGCTAGATCAAGTG.......................................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0
..............TAGTTTGCTAAATCAAGTGTGC....................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GCCTCAAGATGGCGGTGGA...... 19 2 4 0.25 1 1 0 0 0 0 0 0
...............................................................................................................GCGATCATACCAGCACTAA......................................................................................................................... 19 3 11 0.18 2 2 0 0 0 0 0 0
...........................................GCCTTATCAATGTGGTTGTT............................................................................................................................................................................................ 20 3 16 0.06 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................GCTGCGTCGCCTCAAGCA............... 18 2 17 0.06 1 1 0 0 0 0 0 0

Anti-sense strand reads

ACTACTGTTAAACAATCAAACGATCTAGTTCACCCTTGCCCCGCAGAATAGGTACACCAACCAGATACTGGTTCGATTAGTGTAACTTTTGCGAGGAATGTGCTGGAGTGGCGATACTATCGTCGTGATTCGTGATAGGAGGATCAAAATTCGAATTAGAGCGACATTAACTGTGAAAAAGCAGGAACACACAGGAACGTCCACTAAGCCGGCAAGGACGACGCTGCGGAGTTCTTCCTCCACCTCTTCGT
**************************************************.((((((((.((((........(((...(((...)))....)))........))))..))))).)))...(((((..(((((((((......)))).....))))).....)))))....(((((..............))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
 GSM343916
embryo
 M059
embryo
.............................................................................................AGGTTTGTGCTGGAGTGG............................................................................................................................................ 18 2 2 0.50 1 1 0 0 0 0
.......................................CCCGCAGGATAGGTACACCAA............................................................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................GACGACGCTGCGGAGTTCTT............... 20 0 2 0.50 1 1 0 0 0 0
.........................................................................................TGCGAGGTATGTGATAGAGTG............................................................................................................................................. 21 3 3 0.33 1 0 1 0 0 0
....................................................................TTGTTCGATTGGTGTGACTTT.................................................................................................................................................................. 21 3 5 0.20 1 0 0 1 0 0
.......................................................................................................................................................CGAATTCGAGCGACATTT.................................................................................. 18 2 5 0.20 1 1 0 0 0 0
.....................................................................................................................................................................................CTGGGAGACACAGGAACGT................................................... 19 3 15 0.13 2 0 2 0 0 0
..................................................................................................................................CGTGATAGGAGTATTATAAT..................................................................................................... 20 3 11 0.09 1 0 0 0 0 1
.................................................................CAATGTTTCGATTAGTGTAA...................................................................................................................................................................... 20 3 17 0.06 1 0 0 0 1 0
.........................................................................................TGCGAGGTCTGTGCTGTAG............................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:9794773-9795023 - dps_1133 TGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTC----TATGACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC--TATGA-------TAGCAGCACTAAGCACTATCCT-CCTAGTTTTAA------GCT-T----AATCT--CGCTGTAATTGACAC-TTT------TTCGTCC--TTGTGTGTCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droPer2 scaffold_4:5110215-5110465 - dpe_1606 TGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTC----TATAACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC--TATGA-------TAGCAGCACTAAGCACTATAAT-CCTAGTTTTAA------GCT-T----AATAT--CGCTGTAATTGACAC-TTT------TTCGTCG--TTGTGTGTCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droWil2 scf2_1100000004510:1473347-1473553 + dwi_419 TGAATACAATTTGTAAT-TTTGCCAGAGTAAG------GTGTAGCTTCTTATCCATGTGATAAGAT----TCCTAACAAGCTAATCACTTTGACGATGTCTAAGACAGCTTTTTC--------------------------------------------------AG------TTC-AATTGATA-AA-GTGACTCA--TGTTT----------ATTCTCTTTGTCTGTCTTTTATTAGGTTATACGACCCTTTCTGTTGCGTCGTCTCAAAAAGGAAGTGGAGAAGCA
droVir3 scaffold_12875:18061323-18061544 - dvi_7640 TGA-GACAATTTAATAC-CTTGCTAGATTAAATT---AAAGCTGCGACTTATCCATGTGTTCGTGT----CCTTAT--AACTGATCACATTGAATACGCGCTATACACTAGTTCT-TGAAT----AA-AT---AT-------------------T-CCTAATTATAA------GT----------------CAGTAA---GCATGTTTTGATTGTTTATTT--TTCTTTTTTTATTCAGGTCATTCGTCCATTTCTGCTGCGTCGCCTTAAAAAGGAGGTGGAAAAGCA
droMoj3 scaffold_6496:11682417-11682643 - dmo_1100 TGATGACAATTTGTTACCCTTGCTAGAGTAAGTTGATGAAGCTGCGACTTATCCATGTGATTGAGT----TTTT-CC-AGCTGATTGCATTGAATGCGCGCTTTACATTACTTTT--ATTC-ATAT-ATT---TA-------------------TATAT-----CAGTATCAATTT-G----AGA-A--AGTATTAAAATACCT----------A-----T--TTCTCTTTCTTTATAGGTTATTCGTCCATTTCTGCTGCGTCGGCTTAAAAAAGAGGTGGAGAAGCA
droGri2 scaffold_15245:4190051-4190276 - TGATGACAATTTGTTAA-CTTGCTAAACTAAATCT--AAAGCTGCGACTTATCCATGTGATCGTGT----CCTTTCA-AAATTATCACATTGAATACGCGCTTTACACTCCT-TATTTA--TATGC-ATT---TT-------------------GATGTTGTTTTAA------TTT-G----AGC-AATCGTGTTAATCAA-TT----------ATTGTTT--TTAT----TTACATAGGTCATTCGTCCATTTTTGCTGCGACGCCTTAAAAAGGAGGTGGAGAAGCA
droAna3 scaffold_13266:5021128-5021319 + TGATGACACTGTTTTAG-TTTGCCAGATCGAA------GAGGTGCGTCGTGTCCGTGTGGTCTTAT----CCCTAGCCAATAGATTGCATAGAATTAGCATCAAACATGTGGTTTACATTC----AA-GT---TT-------------------TCACAA---------------------------------------------------------CCTC--TTCTTTCTCCTTACAGGTGATTCGTCCCTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACA
droBip1 scf7180000395751:830651-830823 + TGATGACACTGTTTTAG-TTTGCCAGATCGAT------GAGGTGCGTC-TATCCATGTGGTCTTGC----CCTAGCCT-ATAGATTACGTTGAATTAGCATCAGACATTACCACA--A---------------------------------------------------------------------------------------------------CCTC--TCCTTTATCCTTGCAGGTGATTCGTCCTTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACA
droKik1 scf7180000302411:448055-448283 + TGATGACAATTTGTTAG-TTTGCCAAAGGAAA------GAGTGGCGTCTTATCCATGTTCTCAATTTTAACCC--TCAAGTTGATCACATTGAAAATGCTTCTTACACCACCTTT--ACT-TATGA---TTCATA-------------------ACCTTAATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCAA--TTGTTTATCCCTGCAGGTGATTCGTCCCTTCCTACTCCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droFic1 scf7180000453811:50251-50474 - TGATGACAATTTGTTAG-TTTGCCAGATTAAG------GGGGTGCGTCTTATCCATGTGGTCAAGT----TTCCATCAAGCTGTTCACATTGAAAACGCACCTGACAGGATTATT--AG---TAAA-AAT---TT-------------------CCCTTCATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCAC--TTGTTTCTCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
droEle1 scf7180000491232:155379-155602 - TGATGACAATTTGTCAG-TTTGCCAGATAAAG------GAGATGCGTCTTATCCATGTGGTCAAGT----TCACACCATGTTGCTCACATTGAAAACGCCCCTAACACCATATTT---T--TATAA-CAT---AT-------------------TCCATAATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCCC--TTATTCTTCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droRho1 scf7180000780265:149689-149915 - TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAAT----TTTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACCACCATATTAAA--CAAA-TAT---TT-------------------TCCGTAATTTCAA------ACT-A----AAT-G--CGCAGTAAATAGCAT----------ATTGTCT--TTGTTTTTACGTGCAGGTGATTCGTCCTTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAGCA
droBia1 scf7180000302143:1187983-1188208 - TGACGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAGA----TCTAACC-AGTTGCTCACATTGAAAACGCCCCTGACACGACCATCTTTA--CAAAA-AGT---TC-------------------TCCGTAATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTCCTC--TTATTTTTCCATACAGGTAATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droTak1 scf7180000415722:109555-109781 + TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCCAAGA----ACTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACGACAGCCCTTT--TAAAA-TAT---TT-------------------CCCGTAGTTACAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCTT--TTGTTTTTCCCTACAGGTGATTCGTCCGTTCCTACTTCGTCGCCTCAAGAAGGAGGTGGAAAAACA
droEug1 scf7180000409474:724021-724248 - TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGCTCAGGT----TCTTATCAGGCTGCTCACATTGAAAACGCCCCTAACACAATTGCATTTA--TAGCC-TAT---TC-------------------TTTATAATTTCAA------ATTTA----AAT-G--CGCAGTAATCAGCAT----------ATTGCTT--TTGTTTTTCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGTCTCAAGAAGGAGGTTGAAAAACA
dm3 chr2R:17218450-17218674 + TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTGAGT----TCTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATTT----AA-GT---TA-------------------TCCTTATTTTCAA------AAT-A----AAT-G--CGCAGTAATTAGAAT----------TTGGCTT--TTGTTTCTCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAAAAGGAGGTGGAAAAACA
droSim2 2r:17772904-17773128 + dsi_2204 TGATGACAATTTGTTAG-TTTGCCAGATCAAA------GAGATGCGTCTTATCCATGTGGCTAAGT----TCTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATTT----AA-GT---TA-------------------TCCGTATTTTCAA------ACT-A----AAT-G--CGCAGTAATTAGAAT----------TTGGCTT--TTGTTTTTCCGTACAGGTGATTCGTCCGTTTCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
droSec2 scaffold_9:549852-550076 + dse_1613 TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTAAGT----TCTTACCAATTTGTTCACATTGAAAACGCCCCTAACATGACCCTCTTATTT----AA-GT---TA-------------------TTCGTATTTTCAA------ACT-A----AAT-G--CGAAGTAATTAGAAT----------TTTGCTT--TTGTTTCTCCGTAAAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
droYak3 2R:11969694-11969914 - dya_548 TGATGACAATTTGTTAG-TTTGCCAAATCAAC------GAGATTCGTCTTATCCATGTGGTCATGT----TCTTACCAATTTGCTCACATTGAAAACGACCCTAACATGAGCCTCTA--------AA-AA---TA-------------------TCCGCAATTTCAA------ACT-A----TAT-G--CGCAGTAATTAGAAT----------TTTGCTT--TTGTTTCTCCGTACAGGTGATTCGTCCGTTCTTGCTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droEre2 scaffold_4845:11362251-11362474 + der_1105 TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCATGT----TCTT-CCAATTTGTTCACATTGAATACGCCCCTAACATGACCCTCCTAT---TTTAA-GT---TA-------------------TCCGTTATTTCAA------ACT-A----TAT-G--CGCAGTAATTAGAAT-----------TTGCGT--TTGTTTCTCCGTACAGGTGATTCGTCCGTTCTTACTTCGACGCCTCAAGAAGGAGGTTGAAAAACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTC----TATGACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC--TATGA-------TAGCAGCACTAAGCACTATCCT-CCTAGTTTTAA------GCT-T----AATCT--CGCTGTAATTGACAC-TTT------TTCGTCC--TTGTGTGTCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................AACGGGGCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................24221.5043020112316000
...................TTGCTAGATCAAGTGG-GAACGGG......................................................................................................................................................................................................................................................23217.503502060211005
...................TTGCTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................22216.003202050502000
........................................................................................ATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................22116.001601510000000
...................TTGCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................24213.002601340205002
.....................................AACGGGGCGTCTTATCCATGTGG.....................................................................................................................................................................................................................................2329.501901310005000
.......................................................................................CATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2319.0090810000000
...................TTGCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2528.50170941000003
...................TTGCTAGATCAAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................2825.00100620001001
....................TGCTAGATCAAGTGG-GAACGGG......................................................................................................................................................................................................................................................2225.00100900001000
....................TGCTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................2124.5090800000001
...................TTGCTAGATCAAGTGG-GA...........................................................................................................................................................................................................................................................1824.5090600300000
..........................................................................................TGAAAACGCTCCTTACACGA...................................................................................................................................................................................2014.0040400000000
...................TTGCTAGATCAAGTGG-GAA..........................................................................................................................................................................................................................................................1923.5070420100000
....................................................................................TCACATTGAAAACGCTCCTTAC.......................................................................................................................................................................................2213.0030200001000
..................TTTGCTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................2323.0060600000000
...................TTGCTAGATCAAGTGG-GAACG........................................................................................................................................................................................................................................................2122.5050400100000
...................TTGCTAGATCAAGTGG-GAACGGGGCGT..................................................................................................................................................................................................................................................2722.5050400001000
...................................................................................ATCACATTGAAAACGCTCCTTACACGAC..................................................................................................................................................................................2812.0020000000002
......................................ACGGGGCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2322.0040400000000
.............................................GTCTTATCCATGTGGTTGGTC----TATGAC.....................................................................................................................................................................................................................2712.0020100100000
....................TGCTAGATCAAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................2722.0040200002000
............................................................................................AAAACGCTCCTTACACGA...................................................................................................................................................................................1812.0020200000000
.....................................AACGGGGCGTCTTATCCATGTG......................................................................................................................................................................................................................................2222.0040100012000
.....................................AACGGGGCGTCTTATCCATGTGGTT...................................................................................................................................................................................................................................2522.0040101002000
....................TGCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2421.5030200100000
..................TTTGCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2521.5030210000000
....................TGCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2321.5030300000000
...................TTGCTAGATCAAGTGG-GAAC.........................................................................................................................................................................................................................................................2021.5030210000000
..................TTTGCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2621.5030210000000
......................................................................................ACATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2411.0010100000000
....................................................................................TCACATTGAAAACGCTCCTTACA......................................................................................................................................................................................2311.0010000100000
..............................................................................................................................................................................................................................................................................AGAAGGAGGTGGAGAAGCA1911.0010100000000
...................................................................................................................................................................................................................................................TTCGGCCGTTCCTGCTGCGACG........................2211.0010100000000
...................................................................................ATCACATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2711.0010010000000
..........................ATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................1821.0020110000000
...................................................................................................................................................................................................................................GTGTCCTTGCAGGTGATTCGGCCGTTCCT.................................2911.0010000001000
...............AG-TTTGCTAGATCAAGTGG-.............................................................................................................................................................................................................................................................1921.0020200000000
.....................................................................................................................................................................................................................................................CGGCCGTTCCTGCTGCGAC.........................1911.0010000100000
....................................................................................TCACATTGAAAACGCTCCTTACACGAC..................................................................................................................................................................................2711.0010010000000
..................TTTGCTAGATCAAGTGG-GAACG........................................................................................................................................................................................................................................................2221.0020200000000
.......................................................................................CATTGAAAACGCTCCTTACA......................................................................................................................................................................................2011.0010100000000
.....................................AACGGGGCGTCTTATCCATG........................................................................................................................................................................................................................................2021.0020200000000
.....................................................................................CACATTGAAAACGCTCCTTACA......................................................................................................................................................................................2211.0010100000000
..........................................................................ACCAAGCTAATCACATTGAAAACGCTCCT..........................................................................................................................................................................................2911.0010100000000
...................TTGCTAGATCAAGTGG-GAACGGGGCG...................................................................................................................................................................................................................................................2621.0020200000000
.........................................................................................TTGAAAACGCTCCTTACACG....................................................................................................................................................................................2011.0010100000000
..................TTTGCTAGATCAAGTGG-GAACGGGGCGT..................................................................................................................................................................................................................................................2821.0020200000000
................................................................................CTAATCACATTGAAAACGCTCCT..........................................................................................................................................................................................2311.0010100000000
........................................................................................ATTGAAAACGCTCCTTACA......................................................................................................................................................................................1911.0010000100000
.....................................................................................................CTTACACGACCTCACCGC--TA......................................................................................................................................................................2011.0010000100000
....................................................................................TCACATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2611.0010100000000
..................TTTGCTAGATCAAGTGG-GAAC.........................................................................................................................................................................................................................................................2121.0020200000000
..........................................GGCGTCTTATCCATGTGGTTGGTC----T..........................................................................................................................................................................................................................2520.5010100000000
....................TGCTAGATCAAGTGG-GAAC.........................................................................................................................................................................................................................................................1920.5010000001000
......................CTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2120.5010010000000
......................................ACGGGGCGTCTTATCCATGTGG.....................................................................................................................................................................................................................................2220.5010100000000
............................................CGTCTTATCCATGTGGTTGG.................................................................................................................................................................................................................................2020.5010000100000
....................TGCTAGATCAAGTGG-GAACGGGGA....................................................................................................................................................................................................................................................2420.5010000100000
...................TTGCTAGATCAAGTGG-GAACGGGGA....................................................................................................................................................................................................................................................2520.5010000000001
...............................GTGG-GAACGGGGCGTCTTATCC...........................................................................................................................................................................................................................................2220.5010010000000
...............AG-TTTGCTAGATCAAGTG...............................................................................................................................................................................................................................................................1820.5010100000000
............................................CGTCTTATCCATGTGGTTGGTC----T..........................................................................................................................................................................................................................2320.5010000100000
.....................................AACGGGGCGTCTTATCCATGTGGC....................................................................................................................................................................................................................................2420.5010001000000
..................................G-GAACGGGGCGTCTTATCCA..........................................................................................................................................................................................................................................2020.5010100000000
............................CAAGTGG-GAACGGGGCGTCTTATCCA..........................................................................................................................................................................................................................................2620.5010010000000
................G-TTTGCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2620.5010000001000
........................AGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2020.5010100000000
...................TTGCTAGATCAAGTGG-GAACGGGGCGTCT................................................................................................................................................................................................................................................2920.5010010000000
.............................AAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................1820.5010100000000
...................TTGCTAGATCAAGTGG-GAACGGC......................................................................................................................................................................................................................................................2320.5010010000000
.....................................AACGGGGCGTCTTATCCATGT.......................................................................................................................................................................................................................................2120.5010100000000
..........................ATCAAGTGG-GAACGGGGCGTCT................................................................................................................................................................................................................................................2220.5010010000000
..................TTTGCTAGATCAAGTGG-GAACGGG......................................................................................................................................................................................................................................................2420.5010100000000
.....................GCTAGATCAAGTGG-GAACGGG......................................................................................................................................................................................................................................................2120.5010100000000
...............AG-TTTGCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2820.5010010000000
.GATGACAATTTGTTAG-TTTGCTAGATC....................................................................................................................................................................................................................................................................2720.5010010000000
........................................GGGGCGTCTTATCCATGTGGTTGGTC----...........................................................................................................................................................................................................................2620.5010000100000
......................................ACGGGGCGTCTTATCCATG........................................................................................................................................................................................................................................1920.5010100000000
..................TTTGCTAGATCAAGTGG-GAA..........................................................................................................................................................................................................................................................2020.5010100000000
....................................GAACGGGGCGTCTTATCCATGTG......................................................................................................................................................................................................................................2320.5010010000000
....................TGCTAGATCAAGTGG-GAA..........................................................................................................................................................................................................................................................1820.5010100000000
...........................................GCGTCTTATCCATGTGGTTGGTC----...........................................................................................................................................................................................................................2320.5010010000000
................G-TTTGCTAGATCAAGTGG-G............................................................................................................................................................................................................................................................1920.5010100000000
.......................................CGGGGCGTCTTATCCATGTGGTTGGTC----...........................................................................................................................................................................................................................2720.5010001000000
................G-TTTGCTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................2420.5010100000000
.....................GCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2320.5010010000000
.............................................GTCTTATCCATGTGGTTGG.................................................................................................................................................................................................................................1920.5010100000000
................G-TTTGCTAGATCAAGTGG-GAACG........................................................................................................................................................................................................................................................2320.5010100000000
.........................GATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................1920.5010000001000
...........................TCAAGTGG-GAACGGGGCGT..................................................................................................................................................................................................................................................1920.5010100000000
....................TGCTAGATCAAGTGG-GAACGGGGCG...................................................................................................................................................................................................................................................2520.5010100000000
.................................................TATCCATGTGGTTGGTC----T..........................................................................................................................................................................................................................1820.5010000100000
.GATGACAATTTGTTAG-TTTGCTAG.......................................................................................................................................................................................................................................................................2420.5010000001000
......................................ACGGGGCGTCTTATCCATGTGGTT...................................................................................................................................................................................................................................2420.5010100000000
...............AG-TTTGCTAGATCAAGTGG-GAA..........................................................................................................................................................................................................................................................2220.5010100000000
..................TTTGCTAGATCAAGTGG-GAACGGGGCG...................................................................................................................................................................................................................................................2720.5010100000000
..............TAG-TTTGCTAGATCAAGTGA-.............................................................................................................................................................................................................................................................2020.5010100000000
..................TTTGCTAGATCAAGTGG-GAG..........................................................................................................................................................................................................................................................2020.5010100000000
................G-TTTGCTAGATCAAGTGG-.............................................................................................................................................................................................................................................................1820.5010100000000
..............TAG-TTTGCTAGATCAAGTG...............................................................................................................................................................................................................................................................1920.5010100000000
droPer2
TGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTC----TATAACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC--TATGA-------TAGCAGCACTAAGCACTATAAT-CCTAGTTTTAA------GCT-T----AATAT--CGCTGTAATTGACAC-TTT------TTCGTCG--TTGTGTGTCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................ATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................22111.0011262100
.......................................................................................CATTGAAAACGCTCCTTACACGAC..................................................................................................................................................................................24110.00101000000
.......................................................................................CATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2317.007430000
...................TTGCTAGATCAAGTGG-GAACGGG......................................................................................................................................................................................................................................................2336.67200164000
........................................................................................ATTGAAAACGCTCCTTACACGAC..................................................................................................................................................................................2315.005410000
...................TTGCTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................2234.33130130000
..........................................................................................TGAAAACGCTCCTTACACGA...................................................................................................................................................................................2014.004040000
..................TTTGCTAGATCAAGTGG-GAACGGG......................................................................................................................................................................................................................................................2434.00120120000
.........................................................................................TTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2114.004040000
.....................................AACGGGGCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2433.3310050131
....................TGCTAGATCAAGTGG-GAACGGG......................................................................................................................................................................................................................................................2233.009090000
...................TTGCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2432.678061001
...........................................................................................GAAAACGCTCCTTACACGA...................................................................................................................................................................................1912.002020000
....................TGCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2432.006121002
....................................................................................TCACATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2612.002020000
.....................GCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2231.675000005
...................TTGCTAGATCAAGTGG-GAA..........................................................................................................................................................................................................................................................1931.675040001
..................TTTGCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2531.675050000
....................TGCTAGATCAAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................2731.675050000
....................TGCTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................2131.334040000
...................TTGCTAGATCAAGTGG-GAACGGGGCGT..................................................................................................................................................................................................................................................2731.334040000
......................................................................................ACATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2411.001010000
....................................................................................TCACATTGAAAACGCTCCTTAC.......................................................................................................................................................................................2211.001010000
.GATGACAATTTGTTAG-TTTGCTAG.......................................................................................................................................................................................................................................................................2431.003003000
.....................................AACGGGGCGTCTTATCCATGTGG.....................................................................................................................................................................................................................................2331.003000102
........................................................................................ATTGAAAACGCTCCTTACACGACCT................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................................GGTGATTCGGCCGTTCCTGCTGC............................2311.001010000
.........................GATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................1831.003000003
...................TTGCTAGATCAAGTGG-GAACGGGGCG...................................................................................................................................................................................................................................................2631.003030000
............................................................................................................................................................................................................................................................................CAAGAAGGAGGTGGAGAAGC.2011.001010000
.............................................................................................AAACGCTCCTTACACGAC..................................................................................................................................................................................1811.001100000
..........................................................................................................................................................................................................................................................GTTCCTGCTGCGACGCCTCAAGAAGGA............2711.001001000
...................TTGCTAGATCAAGTGG-GA...........................................................................................................................................................................................................................................................1831.003210000
.....................................................................................CACATTGAAAACGCTCCTTAC.......................................................................................................................................................................................2111.001010000
...................TTGCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2531.003020001
.............................................................................AAGCTAATCACATTGAAAACG...............................................................................................................................................................................................2111.001001000
...................................................................................ATCACATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2711.001010000
.................................................................................................................................................................................................................................................GATTCGGCCGTTCCTGCTGCGACGCCT.....................2711.001100000
.....................................................................................CACATTGAAAACGCTCCTTACACGA...................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................ATTCGGCCGTTCCTGCTGC............................1911.001100000
............................................................................................AAAACGCTCCTTACACGA...................................................................................................................................................................................1811.001010000
....................TGCTAGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................2331.003030000
...................TTGCTAGATCAAGTGG-GAACG........................................................................................................................................................................................................................................................2131.003021000
......CAATTTGTTAG-TTTGCTAGAT.....................................................................................................................................................................................................................................................................2130.672200000
...................TTGCTAGATCAAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................2830.672020000
............GTTAG-TTTGCTAGATCAAGT................................................................................................................................................................................................................................................................2030.672100001
..................TTTGCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2630.672010010
..................TTTGCTAGATCAAGTGG-GAA..........................................................................................................................................................................................................................................................2030.672020000
..................TTTGCTAGATCAAGTGG-GAACGGGGCGT..................................................................................................................................................................................................................................................2830.672020000
.......AATTTGTTAG-TTTGCTAG.......................................................................................................................................................................................................................................................................1830.672200000
....................TGCTAGATCAAGTGG-GAACG........................................................................................................................................................................................................................................................2030.672020000
.......AATTTGTTAG-TTTGCTAGATC....................................................................................................................................................................................................................................................................2130.672200000
.........................GATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................1930.672010001
.......AATTTGTTAG-TTTGCTAGATCAAGT................................................................................................................................................................................................................................................................2530.672200000
.....................GCTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................2030.672010001
..........................................GGCGTCTTATCCATGTGGTT...................................................................................................................................................................................................................................2030.672011000
....................TGCTAGATCAAGTGG-GAACGGGGCGTCT................................................................................................................................................................................................................................................2830.672010001
....................TGCTAGATCAAGTGG-GAAC.........................................................................................................................................................................................................................................................1930.672010001
................................................TTATCCATGTGGTTGGTC----...........................................................................................................................................................................................................................1830.331001000
.............................AAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................1830.331000001
...........................................GCGTCTTATCCATGTGGTTG..................................................................................................................................................................................................................................2030.331100000
...............................GTGG-GAACGGGGCGTCTT...............................................................................................................................................................................................................................................1830.331010000
....................TGCTAGATCAAGTGG-GAA..........................................................................................................................................................................................................................................................1830.331000001
......................CTAGATCAAGTGG-GAACGG.......................................................................................................................................................................................................................................................1930.331010000
.....ACAATTTGTTAG-TTTGCTAG.......................................................................................................................................................................................................................................................................2030.331010000
..........................ATCAAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................2130.331010000
.GATGACAATTTGTTAG-TTTGCTAGAT.....................................................................................................................................................................................................................................................................2630.331010000
..............TAG-TTTGCTAGATCAAGTGG-G............................................................................................................................................................................................................................................................2130.331001000
.....................GCTAGATCAAGTGG-GAACGGGGCGTCT................................................................................................................................................................................................................................................2730.331010000
......................................ACGGGGCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2330.331010000
............GTTAG-TTTGCTAGATCAAGTGG-GA...........................................................................................................................................................................................................................................................2430.331010000
...............AG-TTTGCTAGATCAAGTGG-.............................................................................................................................................................................................................................................................1930.331010000
.....................GCTAGATCAAGTGG-GAACGGGGCGTC.................................................................................................................................................................................................................................................2630.331010000
..................TTTGCTAGATCAAGTGG-G............................................................................................................................................................................................................................................................1830.331010000
..............TAG-TTTGCTAGATCAAGT................................................................................................................................................................................................................................................................1830.331100000
.............................................GTCTTATCCATGTGGTTGGTC----...........................................................................................................................................................................................................................2130.331100000
................................................TTATCCATGTGGTTGGTC----T..........................................................................................................................................................................................................................1930.331010000
........................AGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2030.331001000
.....................................AACGGGGCGTCTTATCCATGTGGC....................................................................................................................................................................................................................................2430.331010000
..........TTGTTAG-TTTGCTAGATCAAGT................................................................................................................................................................................................................................................................2230.331100000
............................CAAGTGG-GAACGGGGCGTCTT...............................................................................................................................................................................................................................................2130.331010000
..........................................GGCGTCTTATCCATGTGGTTG..................................................................................................................................................................................................................................2130.331010000
.........................GATCAAGTGG-GAACGGGGCGT..................................................................................................................................................................................................................................................2130.331000001
....................TGCTAGATCAAGTGG-GAACGGGGCG...................................................................................................................................................................................................................................................2530.331000001
.....................GCTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2330.331000001
...TGACAATTTGTTAG-TTTGCTA........................................................................................................................................................................................................................................................................2130.331001000
........................................GGGGCGTCTTATCCATGTGGTTG..................................................................................................................................................................................................................................2330.331001000
..................TTTGCTAGATCAAGTGG-GAAC.........................................................................................................................................................................................................................................................2130.331010000
.....................................AACGGGGCGTCTTATCCATGTGGTT...................................................................................................................................................................................................................................2530.331001000
..ATGACAATTTGTTAG-TTTG...........................................................................................................................................................................................................................................................................1930.331001000
......................CTAGATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................2230.331001000
............GTTAG-TTTGCTAGATCAAGTGG-GAACG........................................................................................................................................................................................................................................................2730.331000001
....................TGCTAGATCAAGTGG-GAACGGGGCGT..................................................................................................................................................................................................................................................2630.331010000
..........................ATCAAGTGG-GAACGGGGC....................................................................................................................................................................................................................................................1830.331000001
.......................................CGGGGCGTCTTATCCATGTG......................................................................................................................................................................................................................................2030.331010000
..................TTTGCTAGATCAAGTGG-GA...........................................................................................................................................................................................................................................................1930.331010000
...TGACAATTTGTTAG-TTTGCTAGAT.....................................................................................................................................................................................................................................................................2430.331100000
..................TTTGCTAGATCAAGTGG-GAACG........................................................................................................................................................................................................................................................2230.331010000
........................AGATCAAGTGG-GAACGGGG.....................................................................................................................................................................................................................................................1930.331000001
.................................................TATCCATGTGGTTGGTC----T..........................................................................................................................................................................................................................1830.331100000
droWil2
TGAATACAATTTGTAAT-TTTGCCAGAGTAAG------GTGTAGCTTCTTATCCATGTGATAAGAT----TCCTAACAAGCTAATCACTTTGACGATGTCTAAGACAGCTTTTTC--------------------------------------------------AG------TTC-AATTGATA-AA-GTGACTCA--TGTTT----------ATTCTCTTTGTCTGTCTTTTATTAGGTTATACGACCCTTTCTGTTGCGTCGTCTCAAAAAGGAAGTGGAGAAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................TTGCCAGAGTAAG------GTGTAGCTTCT................................................................................................................................................................................................................................................24425.0010016121764
..................TTTGCCAGAGTAAG------GTGTAGCTTCT................................................................................................................................................................................................................................................25418.0072111762
...................TTGCCAGAGTAAG------GTGTAGCTTC.................................................................................................................................................................................................................................................23410.25419100121
....................TGCCAGAGTAAG------GTGTAGCTTCT................................................................................................................................................................................................................................................2349.0036555021
....................TGCCAGAGTAAG------GTGTAGCTTC.................................................................................................................................................................................................................................................2248.7535274022
...................TTGCCAGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2548.2533364614
....................TGCCAGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2445.2521011604
....................TGCCAGAGTAAG------GTGTAGCTT..................................................................................................................................................................................................................................................2145.0020021530
....................................................CCATGTGATAAGAT----TCCTAACAAGC................................................................................................................................................................................................................2515.00502030
...................TTGCCAGAGTAAG------GTGTAGCTTCTTAT.............................................................................................................................................................................................................................................2745.002005528
....................TGCCAGAGTAAG------GTGTAGCTTCTTATC............................................................................................................................................................................................................................................2743.251301444
....................TGCCAGAGTAAG------GTGTAGCT...................................................................................................................................................................................................................................................2043.001200840
...................TTGCCAGAGTAAG------GTGTAGCTT..................................................................................................................................................................................................................................................2242.501005221
...................TTGCCAGAGTAAG------GTGTAGCTTCTTA..............................................................................................................................................................................................................................................2642.501003034
.....................GCCAGAGTAAG------GTGTAGCTT..................................................................................................................................................................................................................................................2042.25902520
...................................................TCCATGTGATAAGAT----TCCTAACAAGC................................................................................................................................................................................................................2612.00202000
....................TGCCAGAGTAAG------GTGTAGCTTCTTAT.............................................................................................................................................................................................................................................2642.00800602
..................TTTGCCAGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2642.00801322
...................TTGCCAGAGTAAG------GTGTAGCT...................................................................................................................................................................................................................................................2141.75702410
.....................GCCAGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2341.50600510
....................TGCCAGAGTAAG------GTGTAGC....................................................................................................................................................................................................................................................1941.50601500
.............................AAG------GTGTAGCTTCTTATCCATGTG......................................................................................................................................................................................................................................2431.33400310
.....................GCCAGAGTAAG------GTGTAGCT...................................................................................................................................................................................................................................................1941.25501310
..................TTTGCCAGAGTAAG------GTGTAGCTTC.................................................................................................................................................................................................................................................2441.25500023
.......................................................................................................................................................................................................................................................................CGTCTCAAAAAGGAAGTGGA......2011.00100010
...............................G------GTGTAGCTTCTTATCCATGTG......................................................................................................................................................................................................................................2231.00302010
..................................................................................................................................................................................................................................................ATACGACCCTTTCTGTTGCGTC.........................2211.00101000
..................................................................................................................................................................................................................................................................TGCGTCGTCTCAAAAAGGAAGT.........2211.00100010
.......AATTTGTAAT-TTTGCCAGA......................................................................................................................................................................................................................................................................1911.00100100
...........................................................ATAAGAT----TCCTAACAAGCT...............................................................................................................................................................................................................1911.00100010
............................................................................................................................................................................................................................................................TTCTGTTGCGTCGTCTCAAA.................2011.00100010
......................................................................................................................................................................................................................................................GACCCTTTCTGTTGCGTCGTCT.....................2211.00100100
...................................................TCCATGTGATAAGAT----TCCTAACAAGCT...............................................................................................................................................................................................................2711.00100010
..........................................................................................TGACGATGTCTAAGACAGCT...................................................................................................................................................................................2011.00100010
....................................................CCATGTGATAAGAT----TCCTAA.....................................................................................................................................................................................................................2011.00101000
..............AAT-TTTGCCAGAGTAAG------GTGTAGCTTCT................................................................................................................................................................................................................................................2811.00100100
................T-TTTGCCAGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2711.00100100
..................TTTGCCAGAGTAAG------GTGTAGCTT..................................................................................................................................................................................................................................................2341.00400220
..........................................................................................................................................................................................................................................................................CTCAAAAAGGAAGTGGAGA....1911.00100010
.......................CAGAGTAAG------GTGTAGCTTCT................................................................................................................................................................................................................................................2041.00400310
.......................CAGAGTAAG------GTGTAGCTTCTTAT.............................................................................................................................................................................................................................................2341.00400400
.................................................................................................................................................................................................................................................TATACGACCCTTTCTGTTGCGTC.........................2311.00100100
.....................................................CATGTGATAAGAT----TCCTAACAAGC................................................................................................................................................................................................................2411.00100010
..............AAT-TTTGCCAGAGTAAG------GT.........................................................................................................................................................................................................................................................1911.00100100
............................TAAG------GTGTAGCTTCTTATCCATGTG......................................................................................................................................................................................................................................2531.00300120
..................................................ATCCATGTGATAAGAT----TCCTAACAAGC................................................................................................................................................................................................................2711.00100010
........................AGAGTAAG------GTGTAGCTTCT................................................................................................................................................................................................................................................1940.75300300
........................AGAGTAAG------GTGTAGCTTCTTATC............................................................................................................................................................................................................................................2340.75300210
...........................GTAAG------GTGTAGCTTCTTA..............................................................................................................................................................................................................................................1840.75300030
.......................CAGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2140.75300300
...................TTGCCAGAGTAAG------GTGTAGCTTCTTATC............................................................................................................................................................................................................................................2840.75301002
.......................CAGAGTAAG------GTGTAGCTTCTTATC............................................................................................................................................................................................................................................2440.75300300
..................TTTGCCAGAGTAAG------GTGTAGCTTCTTAT.............................................................................................................................................................................................................................................2840.75301101
.....................GCCAGAGTAAG------GTGTAGCTTCTTAT.............................................................................................................................................................................................................................................2540.75300210
....................TGCCAGAGTAAG------GTGTAGCTTCTTA..............................................................................................................................................................................................................................................2540.75301110
...........................GTAAG------GTGTAGCTTCTTATCCATGTG......................................................................................................................................................................................................................................2630.67201010
...................TTGCCAGAGTAAG------GTGTAGCTTCTTATCC...........................................................................................................................................................................................................................................2940.50211000
..................TTTGCCAGAGTAAG------GTGTAGCTTCTTATC............................................................................................................................................................................................................................................2940.50200110
.............................AAG------GTGTAGCTTCTTATCC...........................................................................................................................................................................................................................................1940.50200020
..................TTTGCCAGAGTAAG------GTGTAGCTTCTTA..............................................................................................................................................................................................................................................2740.50201001
........................AGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2040.50200200
............................TAAG------GTGTAGCTTCTTATCCATGT.......................................................................................................................................................................................................................................2430.33100010
...........................GTAAG------GTGTAGCTTCTTATCCATGT.......................................................................................................................................................................................................................................2530.33100100
.............................AAG------GTGTAGCTTCTTATCCATG........................................................................................................................................................................................................................................2230.33100100
..............................AG------GTGTAGCTTCTTATCCATGT.......................................................................................................................................................................................................................................2230.33100100
..........................AGTAAG------GTGTAGCTTCTTATCCATGTG......................................................................................................................................................................................................................................2730.33100100
..............................AG------GTGTAGCTTCTTATCCATGTGA.....................................................................................................................................................................................................................................2430.33100001
...............................G------GTGTAGCTTCTTATCCATG........................................................................................................................................................................................................................................2030.33100010
...........................GTAAG------GTGTAGCTTCTTATCCATGTGAT....................................................................................................................................................................................................................................2830.33100100
......................................GTGTAGCTTCTTATCCATGTG......................................................................................................................................................................................................................................2130.33100010
.............................AAG------GTGTAGCTTCTTATCCATGTGA.....................................................................................................................................................................................................................................2530.33100010
...........................GTAAG------GTGTAGCTTCTTATCCATG........................................................................................................................................................................................................................................2430.33100010
.........................GAGTAAG------GTGTAGCTTCTTATCCATGTG......................................................................................................................................................................................................................................2830.33100100
....................TGCCAGAGTAAG------GTGTAGCTTCTTATCC...........................................................................................................................................................................................................................................2840.25100001
..................TTTGCCAGAGTAAG------GTGTAGC....................................................................................................................................................................................................................................................2140.25100100
.......................CAGAGTAAG------GTGTAGCTTCC................................................................................................................................................................................................................................................2040.25100100
...................TTGCCAGAGTAAG------GTGTAG.....................................................................................................................................................................................................................................................1940.25101000
.....................GCCAGAGTAAG------GTGTAGCTTC.................................................................................................................................................................................................................................................2140.25100001
.......................CAGAGTAAG------GTGTAGCTT..................................................................................................................................................................................................................................................1840.25100100
.....................GCCAGAGTAAG------GTGTAGCTTCTTA..............................................................................................................................................................................................................................................2440.25100001
.....................GCCAGAGTAAG------GTGTAGCTTCT................................................................................................................................................................................................................................................2240.25100001
........................AGAGTAAG------GTGTAGCTTCTTA..............................................................................................................................................................................................................................................2140.25100100
...................TTGCCAGAGTAAG------GTGTAGC....................................................................................................................................................................................................................................................2040.25100100
.......................CAGAGTAAG------GTGTAGCTTCTTATCC...........................................................................................................................................................................................................................................2540.25100010
..........................AGTAAG------GTGTAGCTTCTTAT.............................................................................................................................................................................................................................................2040.25100100
.....................GCCAGAGTAAG------GTGTAGCTTCTTATC............................................................................................................................................................................................................................................2640.25100100
......................CCAGAGTAAG------GTGTAGCTTCTT...............................................................................................................................................................................................................................................2240.25100100
......................CCAGAGTAAG------GTGTAGCTT..................................................................................................................................................................................................................................................1940.25101000
droVir3
TGA-GACAATTTAATAC-CTTGCTAGATTAAATT---AAAGCTGCGACTTATCCATGTGTTCGTGT----CCTTAT--AACTGATCACATTGAATACGCGCTATACACTAGTTCT-TGAAT----AA-AT---AT-------------------T-CCTAATTATAA------GT----------------CAGTAA---GCATGTTTTGATTGTTTATTT--TTCTTTTTTTATTCAGGTCATTCGTCCATTTCTGCTGCGTCGCCTTAAAAAGGAGGTGGAAAAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................ATTGAATACGCGCTATACACT....................................................................................................................................................................................2117.007002000000000000003000000000000000000000000000000000000000001010
.....................................................................................CACATTGAATACGCGCTATACACT....................................................................................................................................................................................2417.007106000000000000000000000000000000000000000000000000000000000000
........................................................................................ATTGAATACGCGCTATACACTA...................................................................................................................................................................................2216.006004200000000000000000000000000000000000000000000000000000000000
.....................................................................................CACATTGAATACGCGCTATACACTA...................................................................................................................................................................................2515.005003000000000000011000000000000000000000000000000000000000000000
...................TTGCTAGATTAAATT---AAAGCTGCGA..................................................................................................................................................................................................................................................2524.509000010100000002100000000000000000000400000000000000000000000000
.........................................................................................TTGAATACGCGCTATACACTA...................................................................................................................................................................................2114.004003000000000000001000000000000000000000000000000000000000000000
......................................................................................ACATTGAATACGCGCTATACACT....................................................................................................................................................................................2314.004002000000000000001000000000000000100000000000000000000000000000
....................TGCTAGATTAAATT---AAAGCTGCG...................................................................................................................................................................................................................................................2323.507001000000000002300000000100000000000000000000000000000000000000
..................CTTGCTAGATTAAATT---AAAGCTGCG...................................................................................................................................................................................................................................................2523.507001000000000000500000000000000000000100000000000000000000000000
.....................................................CATGTGTTCGTGT----CCTTAT--...................................................................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000003
.......................................................................................CATTGAATACGCGCTATACACT....................................................................................................................................................................................2213.003001000000000000001000000000000000000000000000000000000000000010
.......................................................................................CATTGAATACGCGCTATACACTA...................................................................................................................................................................................2313.003001100000000000000000000000000000000000000000000000000000000010
......................................................................................ACATTGAATACGCGCTATACACTA...................................................................................................................................................................................2413.003003000000000000000000000000000000000000000000000000000000000000
..................CTTGCTAGATTAAATT---AAAGCTGCGACT................................................................................................................................................................................................................................................2813.003000100000000000000000000000000000010000000000000000000000010000
..................CTTGCTAGATTAAATT---AAAGCTGCGA..................................................................................................................................................................................................................................................2622.505002000000000000300000000000000000000000000000000000000000000000
..................CTTGCTAGATTAAATT---AAAGCTGC....................................................................................................................................................................................................................................................2422.505003000000000001100000000000000000000000000000000000000000000000
...................TTGCTAGATTAAATT---AAAGCTGC....................................................................................................................................................................................................................................................2322.004002000000000000000000001000000000010000000000000000000000000000
.........................................................................................TTGAATACGCGCTATACACT....................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
.............................................GACTTATCCATGTGTTCGTGT----C..........................................................................................................................................................................................................................2212.002000100000000010000000000000000000000000000000000000000000000000
.....................................................CATGTGTTCGTGT----CCTTAT--AACTGAT............................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
.......................................AGCTGCGACTTATCCATGTGTT....................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000002000
...................TTGCTAGATTAAATT---AAAGCT......................................................................................................................................................................................................................................................2122.004000000000000000100000000000000000000300000000000000000000000000
.....................................................CATGTGTTCGTGT----CCTTAT--AACT...............................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................................................................TCATTCGTCCATTTCTGCTGCG...........................2211.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AAAAAGGAGGTGGAAAAG..1811.001000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGCTGCGTCGCCTTAAAAAGGAGGT.........2511.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................ATTGAATACGCGCTATACACTAGTTC...............................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..............................................................GTGT----CCTTAT--AACTGATC...........................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000001
.....................................AAAGCTGCGACTTATCCATGTGTTCGTGT----...........................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.............................................................CGTGT----CCTTAT--AACTGATC...........................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
..............TAC-CTTGCTAGATTAAATT---AAAGCTGC....................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.....................................................CATGTGTTCGTGT----CCTT.......................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000001
........................................GCTGCGACTTATCCATGTGTT....................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................AT--AACTGATCACATTGAATACG...............................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.............................................................CGTGT----CCTTAT--AACTGATCACATC......................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................................ACTTATCCATGTGTTCGTGT----C..........................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............ATAC-CTTGCTAGATTAAAT................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
.............................................................CGTGT----CCTTAT--AACTGATCACATTGAA...................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
.......................................................................CTTAT--AACTGATCACATTGAATACGC..............................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................CTTGCTAGATTAAATT---AAAGCTGCGAC.................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................CATTGAATACGCGCTATACAC.....................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...............................................CTTATCCATGTGTTCGTGT----CC.........................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..............TAC-CTTGCTAGATTAAATT---AAAGCTGCG...................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................CATTCGTCCATTTCTGCTGC............................2011.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................CGTCCATTTCTGCTGCGTCGCCTTAAA.................2711.001000000000001000000000000000000000000000000000000000000000000000
........................................................................................ATTGAATACGCGCTATACACTAC..................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................TTCTGCTGCGTCGCCTTAAAAAGGAGG..........2711.001000000000000000000000000000000000000100000000000000000000000000
...................TTGCTAGATTAAATT---AAAGCTGCGACT................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
...................TTGCTAGATTAAATT---AAAGCTGCGAC.................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................ATTGAATACGCGCTATACA......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................CACATTGAATACGCGCTATACAC.....................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.................................T---AAAGCTGCGACTTATCCATG........................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...............AC-CTTGCTAGATTAAATT---AAAGCTGCG...................................................................................................................................................................................................................................................2721.002001000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTAAAAAGGAGGTGGAAAA...1911.001000000000000010000000000000000000000000000000000000000000000000
..........................................................GTTCGTGT----CCTTAT--AACTGATC...........................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
............AATAC-CTTGCTAGATTAAAT................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.......................TAGATTAAATT---AAAGCTGCGACTTATC............................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................ATTGAATACGCGCTATACACTAG..................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
......................................AAGCTGCGACTTATCCATGT.......................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................TTATCCATGTGTTCGTGT----CC.........................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
..........................................................................................TGAATACGCGCTATACACT....................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................ATTGAATACGCGCTATACAC.....................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
................C-CTTGCTAGATTAAATT---AAAGCTGCGAC.................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.............................................................CGTGT----CCTTAT--AACTGATCACAT.......................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................CTTAT--AACTGATCACATTGA....................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................CCATGTGTTCGTGT----CCTTAT--AACTGAT............................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
........................................................................TTAT--AACTGATCACATTGAATACGC..............................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................T--AACTGATCACATTGAATACGCGCTT..........................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000010000
.......................................................................................CATTGAATACGCGCTATACACC....................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................AACTGATCACATTGAATACGCGCTA..........................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................TAT--AACTGATCACATTGAATACGCGCT...........................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................AT--AACTGATCACATTGAATACGC..............................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.......................................................TGTGTTCGTGT----CCTTAT--AACTGA.............................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................GATCACATTGAATACGCGCTATACACT....................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................AACTGATCACATTGAATACGCGCT...........................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................CACATTGAATACGCGCTATACACTAG..................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................GAATACGCGCTATACACTA...................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............AATAC-CTTGCTAGATTAAATT---AAAGCTGC....................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................CATTGAATACGCGCTATACACTAG..................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
....................TGCTAGATTAAATT---AAAGCT......................................................................................................................................................................................................................................................2020.501000000010000000000000000000000000000000000000000000000000000000
..................CTTGCTAGATTAAATT---AAAGCT......................................................................................................................................................................................................................................................2220.501000000000000000100000000000000000000000000000000000000000000000
...................TTGCTAGATTAAATT---AAAGCTG.....................................................................................................................................................................................................................................................2220.501100000000000000000000000000000000000000000000000000000000000000
................C-CTTGCTAGATTAAATT---AAAGCTGCG...................................................................................................................................................................................................................................................2620.501000000000000000100000000000000000000000000000000000000000000000
..................CTTGCTAGATTAAATT---AAAG........................................................................................................................................................................................................................................................2020.501000100000000000000000000000000000000000000000000000000000000000
...................TTGCTAGATTAAATT---AAAGCTGCG...................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
................C-CTTGCTAGATTAAATT---AAAGCTGCGA..................................................................................................................................................................................................................................................2720.501000000000000000100000000000000000000000000000000000000000000000
....................TGCTAGATTAAATT---AAAGCTGCGA..................................................................................................................................................................................................................................................2420.501000000000000000100000000000000000000000000000000000000000000000
..................CTTGCTAGATTAAATT---AAAGCTG.....................................................................................................................................................................................................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
.......................TAGATTAAATT---AAAGCTGC....................................................................................................................................................................................................................................................1920.501000100000000000000000000000000000000000000000000000000000000000
droMoj3
TGATGACAATTTGTTACCCTTGCTAGAGTAAGTTGATGAAGCTGCGACTTATCCATGTGATTGAGT----TTTT-CC-AGCTGATTGCATTGAATGCGCGCTTTACATTACTTTT--ATTC-ATAT-ATT---TA-------------------TATAT-----CAGTATCAATTT-G----AGA-A--AGTATTAAAATACCT----------A-----T--TTCTCTTTCTTTATAGGTTATTCGTCCATTTCTGCTGCGTCGGCTTAAAAAAGAGGTGGAGAAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................TTGCTAGAGTAAGTTGATGAAGCTGCGA..................................................................................................................................................................................................................................................28154.00545000049
...................TTGCTAGAGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................26142.00424032033
...................TTGCTAGAGTAAGTTGATGAAGCTGCG...................................................................................................................................................................................................................................................27142.00422000040
........................................................................................ATTGAATGCGCGCTTTACATTA...................................................................................................................................................................................22139.00393300204
.........................................................................................TTGAATGCGCGCTTTACATTA...................................................................................................................................................................................21132.00322400008
...........................................................................................GAATGCGCGCTTTACATTA...................................................................................................................................................................................19128.00282700001
..................CTTGCTAGAGTAAGTTGATGAAGCTGCG...................................................................................................................................................................................................................................................28121.00212000019
.....................................................................................TGCATTGAATGCGCGCTTTACATTA...................................................................................................................................................................................25115.00151300002
..................CTTGCTAGAGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................27113.00133000010
..........................................................................................TGAATGCGCGCTTTACATTA...................................................................................................................................................................................20113.00131100002
...................TTGCTAGAGTAAGTTGATGAAGCTG.....................................................................................................................................................................................................................................................2519.009001107
....................TGCTAGAGTAAGTTGATGAAGCTGCGA..................................................................................................................................................................................................................................................2716.006101103
...........................................................................................GAATGCGCGCTTTACATTAC..................................................................................................................................................................................2016.006600000
....................TGCTAGAGTAAGTTGATGAAGCTGCG...................................................................................................................................................................................................................................................2616.006000006
......................................................................TTTT-CC-AGCTGATTGCATT......................................................................................................................................................................................................1915.005500000
......................................................................TTTT-CC-AGCTGATTGCATTG.....................................................................................................................................................................................................2015.005500000
.......................................................................................CATTGAATGCGCGCTTTACATTA...................................................................................................................................................................................2315.005001004
.GATGACAATTTGTTACCCTTGCTAGA......................................................................................................................................................................................................................................................................2615.005500000
....................TGCTAGAGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................2515.005000104
............................................................................................AATGCGCGCTTTACATTAC..................................................................................................................................................................................1915.005500000
........................................................................................ATTGAATGCGCGCTTTACATTAC..................................................................................................................................................................................2314.004200101
.......................................................................................CATTGAATGCGCGCTTTACATTAC..................................................................................................................................................................................2414.004100003
.GATGACAATTTGTTACCCTTGCTAG.......................................................................................................................................................................................................................................................................2513.003300000
............................................................................................AATGCGCGCTTTACATTA...................................................................................................................................................................................1813.003300000
..................CTTGCTAGAGTAAGTTGATGAAGCT......................................................................................................................................................................................................................................................2513.003100002
..................CTTGCTAGAGTAAGTTGATGAAGC.......................................................................................................................................................................................................................................................2413.003100002
.......AATTTGTTACCCTTGCTAG.......................................................................................................................................................................................................................................................................1913.003300000
..................CTTGCTAGAGTAAGTTGATG...........................................................................................................................................................................................................................................................2013.003000003
.........................................................................................TTGAATGCGCGCTTTACATTAC..................................................................................................................................................................................2213.003000012
.......AATTTGTTACCCTTGCTAGAG.....................................................................................................................................................................................................................................................................2113.003300000
..................CTTGCTAGAGTAAGTTGATGAAGCTG.....................................................................................................................................................................................................................................................2613.003100101
.................................TGATGAAGCTGCGACTTATC............................................................................................................................................................................................................................................2012.002200000
......................................................................TTTT-CC-AGCTGATTGCATTGA....................................................................................................................................................................................................2112.002200000
........ATTTGTTACCCTTGCTAGAGTAAG.................................................................................................................................................................................................................................................................2412.002200000
.....................GCTAGAGTAAGTTGATGAAGCTG.....................................................................................................................................................................................................................................................2312.002100001
..................CTTGCTAGAGTAAGTTGATGAAGCTGCGA..................................................................................................................................................................................................................................................2912.002000002
............................TAAGTTGATGAAGCTGCGACTTATCCA..........................................................................................................................................................................................................................................2712.002200000
.............................................GACTTATCCATGTGATTGAGT----...........................................................................................................................................................................................................................2112.002200000
.......................................AGCTGCGACTTATCCATGTGATTGA.................................................................................................................................................................................................................................2512.002200000
........................................................................TT-CC-AGCTGATTGCATTGAATGCGCGCT...........................................................................................................................................................................................2812.002200000
..................CTTGCTAGAGTAAGTTGATGAA.........................................................................................................................................................................................................................................................2212.002100001
.................................TGATGAAGCTGCGACTTATCCATGTGA.....................................................................................................................................................................................................................................2712.002200000
.................CCTTGCTAGAGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................2812.002100001
........................................................................TT-CC-AGCTGATTGCATTGAATGCGC..............................................................................................................................................................................................2512.002100100
..............................................................................AGCTGATTGCATTGAATGCGCGC............................................................................................................................................................................................2312.002200000
.GATGACAATTTGTTACCCTTGCTAGAG.....................................................................................................................................................................................................................................................................2712.002200000
...................TTGCTAGAGTAAGTTGATGAA.........................................................................................................................................................................................................................................................2112.002000002
...................TTGCTAGAGTAAGTTGATG...........................................................................................................................................................................................................................................................1912.002000002
........................................................................................ATTGAATGCGCGCTTTACA......................................................................................................................................................................................1912.002200000
.......AATTTGTTACCCTTGCTAGAGT....................................................................................................................................................................................................................................................................2212.002200000
......CAATTTGTTACCCTTGCTAGA......................................................................................................................................................................................................................................................................2112.002200000
........................................................................TT-CC-AGCTGATTGCATTGAATGCGCGC............................................................................................................................................................................................2712.002200000
.....................GCTAGAGTAAGTTGATGAA.........................................................................................................................................................................................................................................................1912.002200000
..................CTTGCTAGAGTAAGTTGATGA..........................................................................................................................................................................................................................................................2112.002000002
................................................................GT----TTTT-CC-AGCTGATTGCATT......................................................................................................................................................................................................2112.002200000
......................................................................TTTT-CC-AGCTGATTGCATTGAATGC................................................................................................................................................................................................2512.002200000
........................................................................TT-CC-AGCTGATTGCATTGAATGCG...............................................................................................................................................................................................2412.002200000
.....................GCTAGAGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................2412.002200000
.......AATTTGTTACCCTTGCTAGA......................................................................................................................................................................................................................................................................2012.002100001
........ATTTGTTACCCTTGCTAGAGT....................................................................................................................................................................................................................................................................2112.002200000
...................TTGCTAGAGTAAGTTGATGA..........................................................................................................................................................................................................................................................2012.002000002
.........TTTGTTACCCTTGCTAGAG.....................................................................................................................................................................................................................................................................1912.002200000
..............................AGTTGATGAAGCTGCGACTTATCCATGT.......................................................................................................................................................................................................................................2811.001100000
..............................................ACTTATCCATGTGATTGA.................................................................................................................................................................................................................................1811.001100000
.........TTTGTTACCCTTGCTAGAGTA...................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................AAAAAAGAGGTGGAGAAG..1811.001000001
......................................................................TTTT-CC-AGCTGATTGCATTGAATGCG...............................................................................................................................................................................................2611.001100000
........................................................GTGATTGAGT----TTTT-CC-AGCTGA.............................................................................................................................................................................................................2211.001100000
............GTTACCCTTGCTAGAGTAAG.................................................................................................................................................................................................................................................................2011.001100000
..................................GATGAAGCTGCGACTTATCCATGTGA.....................................................................................................................................................................................................................................2611.001000001
..........................AGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................1911.001100000
..........................................TGCGACTTATCCATGTGAT....................................................................................................................................................................................................................................1911.001010000
..........................................................................................TGAATGCGCGCTTTACATTAC..................................................................................................................................................................................2111.001100000
...........................................................ATTGAGT----TTTT-CC-AGCTGATTGCATT......................................................................................................................................................................................................2611.001100000
......................................................................................GCATTGAATGCGCGCTTTACATTAC..................................................................................................................................................................................2511.001000001
.......................................................................................CATTGAATGCGCGCTTTACATTACTT................................................................................................................................................................................2611.001100000
.......................................AGCTGCGACTTATCCATGTGA.....................................................................................................................................................................................................................................2111.001100000
....................TGCTAGAGTAAGTTGATGA..........................................................................................................................................................................................................................................................1911.001000001
..............................AGTTGATGAAGCTGCGACTTATCCA..........................................................................................................................................................................................................................................2511.001100000
............................................................TTGAGT----TTTT-CC-AGCTGATTGCATT......................................................................................................................................................................................................2511.001100000
............................TAAGTTGATGAAGCTGCGACTT...............................................................................................................................................................................................................................................2211.001100000
..................................GATGAAGCTGCGACTTATCCATGT.......................................................................................................................................................................................................................................2411.001100000
...............................GTTGATGAAGCTGCGACTTATCCA..........................................................................................................................................................................................................................................2411.001000100
......CAATTTGTTACCCTTGCTAGAGT....................................................................................................................................................................................................................................................................2311.001100000
...TGACAATTTGTTACCCTTGCTAGAGT....................................................................................................................................................................................................................................................................2611.001100000
......................................................ATGTGATTGAGT----TTTT-CC-AGC................................................................................................................................................................................................................2111.001100000
.GATGACAATTTGTTACCCTT............................................................................................................................................................................................................................................................................2011.001100000
...........................................................ATTGAGT----TTTT-CC-AGCTGATTG..........................................................................................................................................................................................................2211.001100000
...................TTGCTAGAGTAAGTTGATGAAGCT......................................................................................................................................................................................................................................................2411.001000001
................................................................GT----TTTT-CC-AGCTGATTGCATTGA....................................................................................................................................................................................................2311.001100000
...................................ATGAAGCTGCGACTTATCC...........................................................................................................................................................................................................................................1911.001100000
.............................AAGTTGATGAAGCTGCGACTT...............................................................................................................................................................................................................................................2111.001000001
..........TTGTTACCCTTGCTAGAGTAAGTT...............................................................................................................................................................................................................................................................2411.001100000
..............................AGTTGATGAAGCTGCGACT................................................................................................................................................................................................................................................1911.001100000
...................TTGCTAGAGTAAGTTGATGAAGC.......................................................................................................................................................................................................................................................2311.001000100
................................................................GT----TTTT-CC-AGCTGATTGCATTGAATG.................................................................................................................................................................................................2611.001000010
.......................................................................TTT-CC-AGCTGATTGCATTGAATGCGCGC............................................................................................................................................................................................2811.001100000
.............................AAGTTGATGAAGCTGCGAC.................................................................................................................................................................................................................................................1911.001000100
...............ACCCTTGCTAGAGTAAGTTGATGAA.........................................................................................................................................................................................................................................................2511.001100000
.................CCTTGCTAGAGTAAGTTGATGA..........................................................................................................................................................................................................................................................2211.001000001
............................................................TTGAGT----TTTT-CC-AGCTGATT...........................................................................................................................................................................................................2011.001100000
.......................................................TGTGATTGAGT----TTTT-CC-AGC................................................................................................................................................................................................................2011.001100000
....GACAATTTGTTACCCTTGCTAGAG.....................................................................................................................................................................................................................................................................2411.001100000
.......................TAGAGTAAGTTGATGAAGCTGCGA..................................................................................................................................................................................................................................................2411.001100000
..................................................................................GATTGCATTGAATGCGCGCTTTACATTA...................................................................................................................................................................................2811.001100000
........................................GCTGCGACTTATCCATGTG......................................................................................................................................................................................................................................1911.001100000
........................................................................TT-CC-AGCTGATTGCATTGAATG.................................................................................................................................................................................................2211.001100000
........ATTTGTTACCCTTGCTAGAG.....................................................................................................................................................................................................................................................................2011.001000001
................................TTGATGAAGCTGCGACTT...............................................................................................................................................................................................................................................1811.001100000
.................................................................................TGATTGCATTGAATGCGCGC............................................................................................................................................................................................2011.001100000
........................................GCTGCGACTTATCCATGTGATTGAGT----...........................................................................................................................................................................................................................2611.001100000
.GATGACAATTTGTTACCCTTGCTAGAGT....................................................................................................................................................................................................................................................................2811.001100000
......................................................................TTTT-CC-AGCTGATTGCATTGAATGCGCGC............................................................................................................................................................................................2911.001100000
............................................................TTGAGT----TTTT-CC-AGCTGATTGC.........................................................................................................................................................................................................2211.001100000
...................................ATGAAGCTGCGACTTATCCATGT.......................................................................................................................................................................................................................................2311.001000001
.......................................AGCTGCGACTTATCCATGTGATTG..................................................................................................................................................................................................................................2411.001100000
......................................................................TTTT-CC-AGCTGATTGCATTGAATGCGC..............................................................................................................................................................................................2711.001100000
...........................................................ATTGAGT----TTTT-CC-AGCTGATTGC.........................................................................................................................................................................................................2311.001100000
.................CCTTGCTAGAGTAAGTTGATGAA.........................................................................................................................................................................................................................................................2311.001000001
.....................................................................................TGCATTGAATGCGCGCTTTACATTAC..................................................................................................................................................................................2611.001100000
...............................................................AGT----TTTT-CC-AGCTGATTGCATT......................................................................................................................................................................................................2211.001100000
.............................................................................................................................................................................................................................................AGGTTATTCGTCCATTTCTGCTGCGTC.........................2711.001000010
........................................................................................ATTGAATGCGCGCTTTACATT....................................................................................................................................................................................2111.001100000
.......................................................................TTT-CC-AGCTGATTGCATTG.....................................................................................................................................................................................................1911.001100000
.................................................................T----TTTT-CC-AGCTGATTGCATT......................................................................................................................................................................................................2011.001100000
................................TTGATGAAGCTGCGACTTAT.............................................................................................................................................................................................................................................2011.001100000
.........TTTGTTACCCTTGCTAGAGT....................................................................................................................................................................................................................................................................2011.001100000
....................................TGAAGCTGCGACTTATCCAT.........................................................................................................................................................................................................................................2011.001100000
...............................GTTGATGAAGCTGCGACTTAT.............................................................................................................................................................................................................................................2111.001000001
...............................................................AGT----TTTT-CC-AGCTGATTGCAT.......................................................................................................................................................................................................2111.001100000
......................................................................................GCATTGAATGCGCGCTTTACATTA...................................................................................................................................................................................2411.001100000
................................................................GT----TTTT-CC-AGCTGATTGCA........................................................................................................................................................................................................1911.001100000
..ATGACAATTTGTTACCCTTGC..........................................................................................................................................................................................................................................................................2111.001100000
....................TGCTAGAGTAAGTTGATGAAGCT......................................................................................................................................................................................................................................................2311.001100000
......................................................ATGTGATTGAGT----TTTT-CC-AGCT...............................................................................................................................................................................................................2211.001000001
.......................................................TGTGATTGAGT----TTTT-CC-AGCTGA.............................................................................................................................................................................................................2311.001000001
.GATGACAATTTGTTACCCTTGCTAGAGTA...................................................................................................................................................................................................................................................................2911.001100000
.......................TAGAGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................2211.001000001
.................CCTTGCTAGAGTAAGTTGATG...........................................................................................................................................................................................................................................................2111.001000001
..............................................................................AGCTGATTGCATTGAATGCG...............................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................................................................GGCTTAAAAAAGAGGTGGAGA....2111.001000001
.........................................................................................TTGAATGCGCGCTTTACAT.....................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................................GCTGCGTCGGCTTAAAAAAGAGGTGGA......2711.001000001
...TGACAATTTGTTACCCTTGC..........................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................GAATGCGCGCTTTACATTACTT................................................................................................................................................................................2211.001100000
.......................................................................................CATTGAATGCGCGCTTTACATT....................................................................................................................................................................................2211.001100000
........................................................................TT-CC-AGCTGATTGCATTGAATGC................................................................................................................................................................................................2311.001100000
...........................GTAAGTTGATGAAGCTGCGACTTAT.............................................................................................................................................................................................................................................2511.001100000
............................TAAGTTGATGAAGCTGCGACT................................................................................................................................................................................................................................................2111.001100000
......................CTAGAGTAAGTTGATGAAGCTGC....................................................................................................................................................................................................................................................2311.001000001
.............................................................TGAGT----TTTT-CC-AGCTGATTGCAT.......................................................................................................................................................................................................2311.001000001
...............................................................AGT----TTTT-CC-AGCTGATTGCATTGAATGC................................................................................................................................................................................................2811.001100000
...................................................................................ATTGCATTGAATGCGCGCTTTACATTA...................................................................................................................................................................................2711.001100000
................................TTGATGAAGCTGCGACTTATCCATGT.......................................................................................................................................................................................................................................2611.001100000
.....................GCTAGAGTAAGTTGATGAAGCTGCG...................................................................................................................................................................................................................................................2511.001000001
......................CTAGAGTAAGTTGATGAAGC.......................................................................................................................................................................................................................................................2011.001000001
...............................................................AGT----TTTT-CC-AGCTGATTGCATTG.....................................................................................................................................................................................................2311.001100000
............................................................TTGAGT----TTTT-CC-AGCTGATTGCA........................................................................................................................................................................................................2311.001100000
.........................GAGTAAGTTGATGAAGCTG.....................................................................................................................................................................................................................................................1911.001000001
...............................................CTTATCCATGTGATTGAGT----...........................................................................................................................................................................................................................1911.001100000
..........................................................GATTGAGT----TTTT-CC-AGCTG..............................................................................................................................................................................................................1911.001000001
....GACAATTTGTTACCCTTGCTAGAGT....................................................................................................................................................................................................................................................................2511.001100000
................................TTGATGAAGCTGCGACTTA..............................................................................................................................................................................................................................................1911.001100000
....................TGCTAGAGTAAGTTGATGAAGCTG.....................................................................................................................................................................................................................................................2411.001000001
........ATTTGTTACCCTTGCTAGAGTA...................................................................................................................................................................................................................................................................2211.001100000
droGri2
TGATGACAATTTGTTAA-CTTGCTAAACTAAATCT--AAAGCTGCGACTTATCCATGTGATCGTGT----CCTTTCA-AAATTATCACATTGAATACGCGCTTTACACTCCT-TATTTA--TATGC-ATT---TT-------------------GATGTTGTTTTAA------TTT-G----AGC-AATCGTGTTAATCAA-TT----------ATTGTTT--TTAT----TTACATAGGTCATTCGTCCATTTTTGCTGCGACGCCTTAAAAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................GCTAAACTAAATCT--AAAGCTGCGA..................................................................................................................................................................................................................................................2411.00110
.....................................................................................CACATTGAATACGCGCTTTACACTC...................................................................................................................................................................................2511.00110
.........................AACTAAATCT--AAAGCTGCGACTTAT.............................................................................................................................................................................................................................................2511.00101
.....................................................................................CACATTGAATACGCGCTTTACACTCC..................................................................................................................................................................................2611.00110
..................CTTGCTAAACTAAATCT--AAAGCTGCGACT................................................................................................................................................................................................................................................2911.00101
.....................................................CATGTGATCGTGT----CCTTTC.....................................................................................................................................................................................................................1911.00110
..............................................................................................................................................................................................................................................................................AAAAGGAGGTGGAGAAGC.1811.00101
droAna3
TGATGACACTGTTTTAG-TTTGCCAGATCGAA------GAGGTGCGTCGTGTCCGTGTGGTCTTAT----CCCTAGCCAATAGATTGCATAGAATTAGCATCAAACATGTGGTTTACATTC----AA-GT---TT-------------------TCACAA---------------------------------------------------------CCTC--TTCTTTCTCCTTACAGGTGATTCGTCCCTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................AATTAGCATCAAACATGTG..................................................................................................................................................................................1912.002000002
...................TTGCCAGATCGAA------GAGGTGC....................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................................................AGGTGATTCGTCCCTTCCTGCTGCGT..........................2611.001000001
...................TTGCCAGATCGAA------GAGGTGCGTC.................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................GTCCCTTCCTGCTGCGTCGC.......................2011.001100000
......................................................................................................................................................................................................................................................GTCCCTTCCTGCTGCGTCGCCTCAA..................2511.001100000
....................TGCCAGATCGAA------GAGGTGCGTCGTGTCC...........................................................................................................................................................................................................................................2811.001100000
..............TAG-TTTGCCAGATCGAA------GAGGT......................................................................................................................................................................................................................................................2211.001001000
droBip1
TGATGACACTGTTTTAG-TTTGCCAGATCGAT------GAGGTGCGTC-TATCCATGTGGTCTTGC----CCTAGCCT-ATAGATTACGTTGAATTAGCATCAGACATTACCACA--A---------------------------------------------------------------------------------------------------CCTC--TCCTTTATCCTTGCAGGTGATTCGTCCTTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACASizeHit CountTotal NormTotal
No Reads
droKik1
TGATGACAATTTGTTAG-TTTGCCAAAGGAAA------GAGTGGCGTCTTATCCATGTTCTCAATTTTAACCC--TCAAGTTGATCACATTGAAAATGCTTCTTACACCACCTTT--ACT-TATGA---TTCATA-------------------ACCTTAATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCAA--TTGTTTATCCCTGCAGGTGATTCGTCCCTTCCTACTCCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotal
No Reads
droFic1
TGATGACAATTTGTTAG-TTTGCCAGATTAAG------GGGGTGCGTCTTATCCATGTGGTCAAGT----TTCCATCAAGCTGTTCACATTGAAAACGCACCTGACAGGATTATT--AG---TAAA-AAT---TT-------------------CCCTTCATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCAC--TTGTTTCTCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droEle1
TGATGACAATTTGTCAG-TTTGCCAGATAAAG------GAGATGCGTCTTATCCATGTGGTCAAGT----TCACACCATGTTGCTCACATTGAAAACGCCCCTAACACCATATTT---T--TATAA-CAT---AT-------------------TCCATAATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCCC--TTATTCTTCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droRho1
TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAAT----TTTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACCACCATATTAAA--CAAA-TAT---TT-------------------TCCGTAATTTCAA------ACT-A----AAT-G--CGCAGTAAATAGCAT----------ATTGTCT--TTGTTTTTACGTGCAGGTGATTCGTCCTTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAGCASizeHit CountTotal NormTotal
No Reads
droBia1
TGACGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAGA----TCTAACC-AGTTGCTCACATTGAAAACGCCCCTGACACGACCATCTTTA--CAAAA-AGT---TC-------------------TCCGTAATTTCAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTCCTC--TTATTTTTCCATACAGGTAATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droTak1
TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCCAAGA----ACTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACGACAGCCCTTT--TAAAA-TAT---TT-------------------CCCGTAGTTACAA------ACT-A----AAT-G--CGCAGTAATTAGCAT----------ATTGCTT--TTGTTTTTCCCTACAGGTGATTCGTCCGTTCCTACTTCGTCGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droEug1
TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGCTCAGGT----TCTTATCAGGCTGCTCACATTGAAAACGCCCCTAACACAATTGCATTTA--TAGCC-TAT---TC-------------------TTTATAATTTCAA------ATTTA----AAT-G--CGCAGTAATCAGCAT----------ATTGCTT--TTGTTTTTCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGTCTCAAGAAGGAGGTTGAAAAACASizeHit CountTotal NormTotal
No Reads
dm3
TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTGAGT----TCTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATTT----AA-GT---TA-------------------TCCTTATTTTCAA------AAT-A----AAT-G--CGCAGTAATTAGAAT----------TTGGCTT--TTGTTTCTCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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....................TGCCAGATCAAG------GAGAT......................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCG...................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GACAATTTGTTAG-TTTGC..........................................................................................................................................................................................................................................................................1831.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CATGTGGCTGAGT----TCTTACCAATT................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAG-TTTGCCAGATCAAG------GAGAT......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GGTGATTCGTCCGTTCCTACTTCGACG........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGTTAG-TTTGCCAGATCAAG------GAGATGC....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................ATTGAAAACGCCCCTAACATGC...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................ATTAGAAT----------TTGGCTT--TTGTTTCTCCGT......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................TTGCCAGATCAAG------GAGATGCGTT.................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................CACATTGAAAACGCCCCTAACA......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AA------AAT-A----AAT-G--CGCAGTAATTAGAAT----------...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAAG------GAGATGCGTCTTATCCATGTGGCTG..................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ATTCACATTGAAAACGCCCCT..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............TAG-TTTGCCAGATCAAG------G..........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ATGTGGCTGAGT----TCTTACCAATT................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CGTCTTATCCATGTGGCTGA.................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........TTGTTAG-TTTGCCAGATCAAG------GAGATGC....................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAAG------GAGATGCGTCTTATCCATGTGGCT...................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGATCAAG------GAGATGCGTCTTA..............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............GTTAG-TTTGCCAGATCAAG------GAGAT......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.GATGACAATTTGTTAG-TTTGCCAGAT.....................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ATTGAAAACGCCCCTAACAT.....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAG-TTTGCCAGATCAAG------GAGA.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGATGCGTCTTATCCATGT.......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATG.....................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GAGATGCGTCTTATCCATGT.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GAGATGCGTCTTATCCATGTGGC....................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................CATGTGGCTGAGT----TCTTACCAATTTATT............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................CAGATCAAG------GAGATGCGTCTTATCC...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CGACGCCTCAAAAAGGAGGTGGAAAAA..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AATTTGTTAG-TTTGCCAGATCAAG------GAG........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GGTGATTCGTCCGTTCCTACTTCGAC.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGAAAACGCCCCTAACATGAA..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTGCCAGATCAAG------GAGATGCGTA.................................................................................................................................................................................................................................................2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTTGTTAG-TTTGCCAGATCAAG------GA.........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GTTCCTACTTCGACGCCTC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAGATCAAG------GAGATGCGTCTTATCCAT.........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTTGTTAG-TTTGCCAGATCAAG------GAG........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCAGATCAAG------GAGATGCG...................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.GATGACAATTTGTTAG-TTT............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGCCAGATCAAG------GAGA.......................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ATCCATGTGGCTGAGT----TCTTACCAATTT...............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GCGTCTTATCCATGTGGCTGA.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droSim2
TGATGACAATTTGTTAG-TTTGCCAGATCAAA------GAGATGCGTCTTATCCATGTGGCTAAGT----TCTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATTT----AA-GT---TA-------------------TCCGTATTTTCAA------ACT-A----AAT-G--CGCAGTAATTAGAAT----------TTGGCTT--TTGTTTTTCCGTACAGGTGATTCGTCCGTTTCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................TTGCCAGATCAAA------GAGATG.....................................................................................................................................................................................................................................................19128.0028202500000000100000
...................TTGCCAGATCAAA------GAGATGCGTC.................................................................................................................................................................................................................................................2318.00810000000000700000
...................TTGCCAGATCAAA------GAGAT......................................................................................................................................................................................................................................................1817.00701600000000000000
........................................................................................ATTGAAAACGCCCCTAACATGA...................................................................................................................................................................................2214.00400010003000000000
...................TTGCCAGATCAAA------GAGATGCGT..................................................................................................................................................................................................................................................2213.00300000000000300000
.....................GCCAGATCAAA------GAGA.......................................................................................................................................................................................................................................................1513.00300000000003000000
.......................................AGATGCGTCTTATCCATGTGGCT...................................................................................................................................................................................................................................2312.00200200000000000000
...................TTGCCAGATCAAA------GAGATGC....................................................................................................................................................................................................................................................2012.00201010000000000000
..................................................................................................................................................................................................................................................ATTCGTCCGTTTCTACTTCGAC.........................2212.00200200000000000000
...................TTGCCAGATCAAA------GAGATGCGTCTTAT.............................................................................................................................................................................................................................................2712.00200000000000200000
...................TTGCCAGATCAAA------GAGATGCG...................................................................................................................................................................................................................................................2112.00200000200000000000
....................TGCCAGATCAAA------GAGATGCGTCC................................................................................................................................................................................................................................................2311.00110000000000000000
.....................GCCAGATCAAA------GAGATGCG...................................................................................................................................................................................................................................................1911.00100000000001000000
....................................................................................TCACATTGAAAACGCCCCTAACATGA...................................................................................................................................................................................2611.00100000001000000000
.GATGACAATTTGTTAG-TTTGCCAGATC....................................................................................................................................................................................................................................................................2711.00100010000000000000
............................................CGTCTTATCCATGTGGCTAAGT----...........................................................................................................................................................................................................................2211.00100000000000100000
........................................................................................................................................................................................................................................................................GCCTTAAAAAGGAGGT.........1611.00100000000001000000
.......................................................................................CATTGAAAACGCCCCTAACATGA...................................................................................................................................................................................2311.00100010000000000000
.....................................................CATGTGGCTAAGT----TCTTAC.....................................................................................................................................................................................................................1911.00100000000000100000
TGATGACAATTTGTTAG-TTTGCCAGA......................................................................................................................................................................................................................................................................2611.00100000000010000000
.......................................................................................................AACATGACCCTCTTATTT----AA-GT---T...........................................................................................................................................................2311.00100000000000100000
.....................GCCAGATCAAA------GAGAT......................................................................................................................................................................................................................................................1611.00100000000001000000
........ATTTGTTAG-TTTGCCAGA......................................................................................................................................................................................................................................................................1811.00100010000000000000
........................................................................................ATTGAAAACGCCCCTAACATGAC..................................................................................................................................................................................2311.00100000100000000000
............................................................................................AAAACGCCCCTAACATGA...................................................................................................................................................................................1811.00100000001000000000
..................................................................................ATTCACATTGAAAACGCCCCTAACATGA...................................................................................................................................................................................2811.00100010000000000000
.....................GCCAGATCAAA------GAGATG.....................................................................................................................................................................................................................................................1711.00100000000001000000
......................................................ATGTGGCTAAGT----TCTTACC....................................................................................................................................................................................................................1911.00100100000000000000
..........................................................................................................................................................................................................................................................................CTTAAAAAGGAGGTGGAA.....1811.00100010000000000000
.........TTTGTTAG-TTTGCCAGATCAAA------GAGAT......................................................................................................................................................................................................................................................2711.00100010000000000000
..............................AA------GAGATGCGTCTTATCCATGTGGC....................................................................................................................................................................................................................................2511.00100010000000000000
..........................................................................................TGAAAACGCCCCTAACATGA...................................................................................................................................................................................2011.00100000001000000000
.................................................................................................................................................................................................................................................GATTCGTCCGTTTCTACTTCGAC.........................2311.00100100000000000000
..................TTTGCCAGATCAAA------GAGATGCGTCTTA..............................................................................................................................................................................................................................................2711.00100100000000000000
...............AG-TTTGCCAGATCAAA------GAGAT......................................................................................................................................................................................................................................................2111.00100000000001000000
..................TTTGCCAGATCAAA------GAGATG.....................................................................................................................................................................................................................................................2011.00110000000000000000
............................CAAA------GAGATGCGTCTTATCCATGTGGCG...................................................................................................................................................................................................................................2811.00101000000000000000
............................CAAA------GAGATGCGTCTTATCCATGTGG.....................................................................................................................................................................................................................................2611.00100010000000000000
droSec2
TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTAAGT----TCTTACCAATTTGTTCACATTGAAAACGCCCCTAACATGACCCTCTTATTT----AA-GT---TA-------------------TTCGTATTTTCAA------ACT-A----AAT-G--CGAAGTAATTAGAAT----------TTTGCTT--TTGTTTCTCCGTAAAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................TTGCCAGATCAAG------GAGATGCGTC.................................................................................................................................................................................................................................................23113.001301120
...................TTGCCAGATCAAG------GAGATGCGTCTTAT.............................................................................................................................................................................................................................................2714.0040220
...................TTGCCAGATCAAG------GAGAT......................................................................................................................................................................................................................................................1814.0040040
...................TTGCCAGATCAAG------GAGATGCGT..................................................................................................................................................................................................................................................2212.0021001
..................TTTGCCAGATCAAG------GAGATGCGTC.................................................................................................................................................................................................................................................2412.0021010
...................TTGCCAGATCAAG------GAGATGC....................................................................................................................................................................................................................................................2012.0020020
...................TTGCCAGATCAAG------GAGATGCGTCT................................................................................................................................................................................................................................................2412.0021100
...................TTGCCAGATCAAG------GAGATGCGTCTT...............................................................................................................................................................................................................................................2512.0020020
..................TTTGCCAGATCAAG------GAGATGCGTCTT...............................................................................................................................................................................................................................................2611.0010010
..................TTTGCCAGATCAAG------GAGATG.....................................................................................................................................................................................................................................................2011.0010010
.....................GCCAGATCAAG------GAGATGCGTCTT...............................................................................................................................................................................................................................................2311.0010100
...........................................................................................GAAAACGCCCCTAACATGA...................................................................................................................................................................................1911.0011000
..........TTGTTAG-TTTGCCAGATCAAG------GAGA.......................................................................................................................................................................................................................................................2511.0010010
..........................ATCAAG------GAGATGCGTCTT...............................................................................................................................................................................................................................................1811.0010010
..........................ATCAAG------GAGATGCGTCTTATC............................................................................................................................................................................................................................................2111.0010010
..............................AG------GAGATGCGTCTTATCCATGTGGC....................................................................................................................................................................................................................................2511.0010010
.........................GATCAAG------GAGATGCGTCTT...............................................................................................................................................................................................................................................1911.0010010
..................TTTGCCAGATCAAG------GAGATGCGTCTTA..............................................................................................................................................................................................................................................2711.0010100
...................TTGCCAGATCAAG------GAGATGCGTCTTATC............................................................................................................................................................................................................................................2811.0010010
..............................................................................................................................................................................................................................................................CTACTTCGACGCCTTAAAAAGGA............2311.0010010
........................................GATGCGTCTTATCCATGTGGCT...................................................................................................................................................................................................................................2211.0010010
..............TAG-TTTGCCAGATCAAG------G..........................................................................................................................................................................................................................................................1811.0010010
......................................GAGATGCGTCTTATCCATGTGGCTA..................................................................................................................................................................................................................................2511.0010010
....................TGCCAGATCAAG------GAGATGCGT..................................................................................................................................................................................................................................................2111.0010010
..........TTGTTAG-TTTGCCAGATCAAG------GA.........................................................................................................................................................................................................................................................2311.0010010
.............................................................................AATTTGTTCACATTGAAAACGCCCCT..........................................................................................................................................................................................2611.0010010
........................................GATGCGTCTTATCCATGTGGCTAAG................................................................................................................................................................................................................................2511.0010010
.........................................ATGCGTCTTATCCATGTGGCTAAGT----...........................................................................................................................................................................................................................2511.0010100
droYak3
TGATGACAATTTGTTAG-TTTGCCAAATCAAC------GAGATTCGTCTTATCCATGTGGTCATGT----TCTTACCAATTTGCTCACATTGAAAACGACCCTAACATGAGCCTCTA--------AA-AA---TA-------------------TCCGCAATTTCAA------ACT-A----TAT-G--CGCAGTAATTAGAAT----------TTTGCTT--TTGTTTCTCCGTACAGGTGATTCGTCCGTTCTTGCTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................TCACATTGAAAACGACCCTAACATGA...................................................................................................................................................................................26121.0021032000000016
.................................................................................TGCTCACATTGAAAACGACCCTAACATGA...................................................................................................................................................................................2918.00800000000008
.GATGACAATTTGTTAG-TTTGCC.........................................................................................................................................................................................................................................................................2217.00702400010000
...................TTGCCAAATCAAC------GAGATTCGTC.................................................................................................................................................................................................................................................2316.00600600000000
...................TTGCCAAATCAAC------GAGATTCGTCT................................................................................................................................................................................................................................................2416.00600010050000
...................TTGCCAAATCAAC------GAGATTCGTCTT...............................................................................................................................................................................................................................................2514.00401200010000
...................TTGCCAAATCAAC------GAGATTCGTCTTATCC...........................................................................................................................................................................................................................................2914.00400300010000
.........................................................................................TTGAAAACGACCCTAACATGA...................................................................................................................................................................................2114.00402000010001
...................TTGCCAAATCAAC------GAGATTCGTCTTATC............................................................................................................................................................................................................................................2813.00300300000000
............................CAAC------GAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2813.00302000010000
...................TTGCCAAATCAAC------GAGATTCGT..................................................................................................................................................................................................................................................2213.00300100110000
.........................................ATTCGTCTTATCCATGTGGTCATGT----...........................................................................................................................................................................................................................2513.00301000110000
...............................C------GAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2512.00200001010000
........................................................................................ATTGAAAACGACCCTAACATGA...................................................................................................................................................................................2212.00201000010000
...........................TCAAC------GAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2912.00200100010000
.........................................ATTCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2112.00202000000000
...........................................................................................GAAAACGACCCTAACATGA...................................................................................................................................................................................1912.00202000000000
..................................................................................................................................................................................................................................................ATTCGTCCGTTCTTGCTTCGACGCCT.....................2612.00201100000000
............................................CGTCTTATCCATGTGGTCATGT----...........................................................................................................................................................................................................................2212.00201000010000
.............................AAC------GAGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2711.00100100000000
........................................................................TTACCAATTTGCTCACATTGAAAAC................................................................................................................................................................................................2511.00101000000000
..................TTTGCCAAATCAAC------GAGATTCGTCTTA..............................................................................................................................................................................................................................................2711.00100010000000
.GATGACAATTTGTTAG-TTTGCCAAA......................................................................................................................................................................................................................................................................2511.00101000000000
.........................................................................................TTGAAAACGACCCTAACATG....................................................................................................................................................................................2011.00100000000001
................................................................GT----TCTTACCAATTTGCTCACATTGAAAAC................................................................................................................................................................................................2911.00101000000000
........ATTTGTTAG-TTTGCCAAATCAAC------...........................................................................................................................................................................................................................................................2311.00100000010000
.......................................AGATTCGTCTTATCCATGTGGTCATGT----...........................................................................................................................................................................................................................2711.00101000000000
...................TTGCCAAATCAAC------GAGATTCGTCTTA..............................................................................................................................................................................................................................................2611.00100000010000
............................................................................CAATTTGCTCACATTGAAAACGACCC...........................................................................................................................................................................................2611.00100100000000
.......AATTTGTTAG-TTTGCCAAATCAAC------GA.........................................................................................................................................................................................................................................................2611.00100100000000
..ATGACAATTTGTTAG-TTTGCC.........................................................................................................................................................................................................................................................................2111.00100100000000
.........................................ATTCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2011.00101000000000
...............................................................................TTTGCTCACATTGAAAACGACC............................................................................................................................................................................................2211.00100100000000
.....................................................................................CACATTGAAAACGACCCTAACATGA...................................................................................................................................................................................2511.00101000000000
...............................................................................................ACGACCCTAACATGA...................................................................................................................................................................................1511.00100000000001
.......................................AGATTCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2311.00101000000000
..............................................................................ATTTGCTCACATTGAAAACGACCCT..........................................................................................................................................................................................2511.00101000000000
....................TGCCAAATCAAC------GAGATTCGTCTT...............................................................................................................................................................................................................................................2411.00100000010000
...............................................................................................................................................................................................................................................................TGCTTCGACGCCTCAAGAAGGA............2211.00100100000000
......................................................................................ACATTGAAAACGACCCTAAC.......................................................................................................................................................................................2011.00100000100000
.................................................................................................................................................................................................................................................GATTCGTCCGTTCTTGCTTCGACGCCT.....................2711.00101000000000
....................................................................................TCACATTGAAAACGACCCTAAC.......................................................................................................................................................................................2211.00100010000000
................................................................................TTGCTCACATTGAAAACGACCCTAAC.......................................................................................................................................................................................2611.00101000000000
............................................................................................................................................................................................................................................................TCTTGCTTCGACGCCTCAAGAAGGAGGT.........2811.00100100000000
..................................................ATCCATGTGGTCATGT----TCTTACC....................................................................................................................................................................................................................2311.00100100000000
......................................................................................ACATTGAAAACGACCCTAACATGA...................................................................................................................................................................................2411.00100100000000
.GATGACAATTTGTTAG-TTTGC..........................................................................................................................................................................................................................................................................2111.00100100000000
..............................................................ATGT----TCTTACCAATTTGCTCACATTG.....................................................................................................................................................................................................2611.00101000000000
............................................................................................................................................................................................................................................................................CAAGAAGGAGGTGGAAAAACA2111.00100000010000
................................................................................TTGCTCACATTGAAAACGACCC...........................................................................................................................................................................................2211.00100100000000
.............................................................CATGT----TCTTACCAATTTGCTCAC.........................................................................................................................................................................................................2311.00100000010000
...............................C------GAGATTCGTCTTATCCATG........................................................................................................................................................................................................................................2011.00100100000000
......CAATTTGTTAG-TTTGCCAAAT.....................................................................................................................................................................................................................................................................2111.00100100000000
........................................................................................ATTGAAAACGACCCTAACATGAG..................................................................................................................................................................................2311.00100000010000
........ATTTGTTAG-TTTGCCAAAT.....................................................................................................................................................................................................................................................................1911.00101000000000
..................TTTGCCAAATCAAC------GAGATTCGTCTT...............................................................................................................................................................................................................................................2611.00100010000000
...................................................................................................................................................................................................................................................TTCGTCCGTTCTTGCTTCGACGCCT.....................2511.00101000000000
............................CAAC------GAGATTCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2711.00100100000000
..............................................................................................................................................................................................................................................................................AGAAGGAGGTGGAAAAAC.1811.00100100000000
....................TGCCAAATCAAC------GAGATTCGTCTTATC............................................................................................................................................................................................................................................2711.00100100000000
..................TTTGCCAAATCAAC------GAGATTCGTC.................................................................................................................................................................................................................................................2411.00100100000000
...TGACAATTTGTTAG-TTTGCCAAAT.....................................................................................................................................................................................................................................................................2411.00100100000000
..ATGACAATTTGTTAG-TTTGCCAAAT.....................................................................................................................................................................................................................................................................2511.00101000000000
..............................AC------GAGATTCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2511.00100100000000
.........................AATCAAC------GAGATTCGTCTTATCC...........................................................................................................................................................................................................................................2311.00100100000000
..................TTTGCCAAATCAAC------GAGATTCGTCTTAT.............................................................................................................................................................................................................................................2811.00100100000000
..........................................TTCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2011.00100000010000
..................TTTGCCAAATCAAC------GAGATTCGT..................................................................................................................................................................................................................................................2311.00101000000000
.......................................................................................CATTGAAAACGACCCTAACATGA...................................................................................................................................................................................2311.00100000010000
droEre2
TGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCATGT----TCTT-CCAATTTGTTCACATTGAATACGCCCCTAACATGACCCTCCTAT---TTTAA-GT---TA-------------------TCCGTTATTTCAA------ACT-A----TAT-G--CGCAGTAATTAGAAT-----------TTGCGT--TTGTTTCTCCGTACAGGTGATTCGTCCGTTCTTACTTCGACGCCTCAAGAAGGAGGTTGAAAAACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................TTGCCAGATCAAG------GAGATGCGTC.................................................................................................................................................................................................................................................23113.00132108110
...............................................................................................ACGCCCCTAACATGA...................................................................................................................................................................................15111.001100000011
..................TTTGCCAGATCAAG------GAGATG.....................................................................................................................................................................................................................................................2015.0054000100
........................................GATGCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2115.0050004100
...................TTGCCAGATCAAG------GAGATGCGT..................................................................................................................................................................................................................................................2215.0052201000
..................TTTGCCAGATCAAG------GAGATGCGTC.................................................................................................................................................................................................................................................2415.0050104000
........................................GATGCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2214.0040201100
..................TTTGCCAGATCAAG------GAGATGCGTCTTATC............................................................................................................................................................................................................................................2914.0040000004
...................TTGCCAGATCAAG------GAGATGCGTCTT...............................................................................................................................................................................................................................................2513.0030001110
...................TTGCCAGATCAAG------GAGATGC....................................................................................................................................................................................................................................................2013.0030101010
........................................GATGCGTCTTATCCATGTGGTCA..................................................................................................................................................................................................................................2313.0031000200
..................TTTGCCAGATCAAG------GAGATGCGTCTTA..............................................................................................................................................................................................................................................2713.0033000000
........................................................................................ATTGAATACGCCCCTAACATGA...................................................................................................................................................................................2213.0032000010
....................................................................................TCACATTGAATACGCCCCTAACATGA...................................................................................................................................................................................2613.0031010001
...................TTGCCAGATCAAG------GAGAT......................................................................................................................................................................................................................................................1813.0030100020
.............................................................CATGT----TCTT-CCAATTTGTTCAC.........................................................................................................................................................................................................2213.0030200100
........................................................................................ATTGAATACGCCCCTAACATGAC..................................................................................................................................................................................2313.0030300000
.......................................................................................CATTGAATACGCCCCTAACATGAC..................................................................................................................................................................................2412.0020200000
..................TTTGCCAGATCAAG------GAGATGCGT..................................................................................................................................................................................................................................................2312.0021100000
.........................................ATGCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2112.0020001010
...............................................................................TTTGTTCACATTGAATACGCCCCTAAC.......................................................................................................................................................................................2712.0020200000
...................TTGCCAGATCAAG------GAGATGCGTCTTAT.............................................................................................................................................................................................................................................2712.0021100000
.......AATTTGTTAG-TTTGCCAGATCAAG------GAG........................................................................................................................................................................................................................................................2711.0010001000
....................................................................................TCACATTGAATACGCCCCT..........................................................................................................................................................................................1911.0010001000
......................................................................................ACATTGAATACGCCCCTAACATGA...................................................................................................................................................................................2411.0011000000
.....................................................................................CACATTGAATACGCCCCTAACATGA...................................................................................................................................................................................2511.0011000000
..................................................................................................................................................................................................................................................................TTCGACGCCTCAAGAAGGA............1911.0010001000
........ATTTGTTAG-TTTGCCAGATCAAG------GA.........................................................................................................................................................................................................................................................2511.0010001000
..............................AG------GAGATGCGTCTTATCCATGTG......................................................................................................................................................................................................................................2311.0010100000
.................................................................................................................................................................................................................................................................CTTCGACGCCTCAAGAAGGA............2011.0010001000
.............................AAG------GAGATGCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2711.0010100000
.......................CAGATCAAG------GAGATGCGTCTTATCC...........................................................................................................................................................................................................................................2511.0010100000
.............................................................CATGT----TCTT-CCAATTTGTTCACATT......................................................................................................................................................................................................2511.0010100000
..............................................................ATGT----TCTT-CCAATTTGTTCACATT......................................................................................................................................................................................................2411.0010100000
...................................................TCCATGTGGTCATGT----TCTT-CCAATTTGT.............................................................................................................................................................................................................2811.0011000000
..................................................................................GTTCACATTGAATACGCCCCTAACATGA...................................................................................................................................................................................2811.0010100000
..........................ATCAAG------GAGATGCGTCTTAT.............................................................................................................................................................................................................................................2011.0010000100
............GTTAG-TTTGCCAGATCAAG------...........................................................................................................................................................................................................................................................1911.0010001000
..........................ATCAAG------GAGATGCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2911.0010000100
.............................................GTCTTATCCATGTGGTCA..................................................................................................................................................................................................................................1811.0010001000
.........................................ATGCGTCTTATCCATGTGGTCA..................................................................................................................................................................................................................................2211.0010000100
............................................CGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................1811.0010100000
.......AATTTGTTAG-TTTGCCAGATCA...................................................................................................................................................................................................................................................................2211.0010001000
.GATGACAATTTGTTAG-TTTGCC.........................................................................................................................................................................................................................................................................2211.0010100000
...................TTGCCAGATCAAG------GAGATGCGTCT................................................................................................................................................................................................................................................2411.0010001000
....................TGCCAGATCAAG------GAGATGCGT..................................................................................................................................................................................................................................................2111.0010001000
........................AGATCAAG------GAGATGCGTCTTA..............................................................................................................................................................................................................................................2111.0011000000
..................................................ATCCATGTGGTCATGT----TCTT-CC....................................................................................................................................................................................................................2211.0010100000
.....................GCCAGATCAAG------GAGATGC....................................................................................................................................................................................................................................................1811.0010000010
..............................................................ATGT----TCTT-CCAATTTGTTC...........................................................................................................................................................................................................1911.0010001000
.............................AAG------GAGATGCGTCTTATCCATGTGGT....................................................................................................................................................................................................................................2611.0011000000
.............................AAG------GAGATGCGTCTTATCC...........................................................................................................................................................................................................................................1911.0010100000
.......................................AGATGCGTCTTATCCATGTGGTCATGT----...........................................................................................................................................................................................................................2711.0010000100
..........TTGTTAG-TTTGCCAGATCAA..................................................................................................................................................................................................................................................................2011.0010001000
.GATGACAATTTGTTAG-TTTGCCAGAT.....................................................................................................................................................................................................................................................................2611.0011000000
..................TTTGCCAGATCAAG------GAGATGCGTCTT...............................................................................................................................................................................................................................................2611.0011000000
....................................................................................TCACATTGAATACGCCCCTAACATGAC..................................................................................................................................................................................2711.0010100000
......................................GAGATGCGTCTTATCCATGTGGTCA..................................................................................................................................................................................................................................2511.0010100000
....................TGCCAGATCAAG------GAGATGCGTCT................................................................................................................................................................................................................................................2311.0011000000
............................CAAG------GAGATGCGTCTTATCCATGTGGTC...................................................................................................................................................................................................................................2811.0010100000
..................TTTGCCAGATCAAG------GAGATGC....................................................................................................................................................................................................................................................2111.0010001000
.............................AAG------GAGATGCGTCTTATCCATGTG......................................................................................................................................................................................................................................2411.0010001000
..................................................................................GTTCACATTGAATACGCCCCTAACATGAC..................................................................................................................................................................................2911.0010100000
..........TTGTTAG-TTTGCCAGATC....................................................................................................................................................................................................................................................................1811.0010001000
...................................................................................................................................................................................................................................................TTCGTCCGTTCTTACTTCGACG........................2211.0011000000
....................................................................................TCACATTGAATACGCCCCTAACATG....................................................................................................................................................................................2511.0011000000
...........................TCAAG------GAGATGCGTCTTATC............................................................................................................................................................................................................................................2011.0010100000
................G-TTTGCCAGATCAAG------GAGATGCGTC.................................................................................................................................................................................................................................................2511.0010001000
.......................................................................CTT-CCAATTTGTTCACATTGAATACG...............................................................................................................................................................................................2611.0010100000
..ATGACAATTTGTTAG-TTTGC..........................................................................................................................................................................................................................................................................2011.0010001000
..................................................................................GTTCACATTGAATACGCCCCT..........................................................................................................................................................................................2111.0010100000
..........TTGTTAG-TTTGCCAGATCAAG------GAGA.......................................................................................................................................................................................................................................................2511.0010000100
............GTTAG-TTTGCCAGATCAAG------GAGA.......................................................................................................................................................................................................................................................2311.0010000010
............GTTAG-TTTGCCAGATCAAG------GAG........................................................................................................................................................................................................................................................2211.0010000100
..................................................................................GTTCACATTGAATACGCCCCTAACATG....................................................................................................................................................................................2711.0011000000
.................................................TATCCATGTGGTCATGT----TCTT-CC....................................................................................................................................................................................................................2311.0010100000
.............................................................CATGT----TCTT-CCAATTTGTT............................................................................................................................................................................................................1911.0010000100
..................TTTGCCAGATCAAG------GAGAT......................................................................................................................................................................................................................................................1911.0011000000
.........TTTGTTAG-TTTGCCAGATC....................................................................................................................................................................................................................................................................1911.0010100000
......................................................ATGTGGTCATGT----TCTT-CCAATTTGTTC...........................................................................................................................................................................................................2711.0010100000
...................TTGCCAGATCAAG------GAGATGCGTCTTA..............................................................................................................................................................................................................................................2611.0010001000
........................................................................TT-CCAATTTGTTCACATTGAATACGCCC............................................................................................................................................................................................2811.0010100000
................................................TTATCCATGTGGTCATGT----TCTT-CC....................................................................................................................................................................................................................2411.0010001000
...............AG-TTTGCCAGATCAAG------GAGATGCGTC.................................................................................................................................................................................................................................................2611.0010000100
........................................GATGCGTCTTATCCATGT.......................................................................................................................................................................................................................................1820.5010100000

Generated: 05/18/2015 at 12:03 AM