ID:

dps_112

 Coordinate:

Unknown_group_30:64027-64104 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.9 -16.8 -16.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy15-I_Dya-intLTRGypsy+
mature
  1. dps_111  Unknown_group_30:53781-53803 -
  2. dps_112  Unknown_group_30:64028-64050 +
  3. Unknown_group_30:69457-69479 +
star
  1. dps_111  Unknown_group_30:53731-53756 -
  2. dps_112  Unknown_group_30:64075-64100 +
  3. Unknown_group_30:69504-69529 +

Sense Strand Reads

GAAGAAAAATCAGTTCCGTATACATCGTTTGTGACACCGTAAGGACAGTATGAGTACTTGAGAATGCCCTTTGGGTTAAAAAATGGATCCGCTATTTTTCAAAGATTTATTTCGGAGCTCTTGAGAGACTTTATTAAGAACAAAAGCATTGTAGTGTACATGGATGATATATTAGTAG
************************************((....))..((((.((((.(((((((..((((..((((((.((((((((.....))))))))....))))))....)).)))))))))..))))))))....*************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 V112
male body		 M059
embryo
 GSM343916
embryo
 GSM444067
head
 M062
head
 M022
male body
...................................................GAGTACTTGAGAATGCCCTTTGG........................................................................................................ 23 0 3 42.00 126 112 6 6 0 2 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTTTGG........................................................................................................ 24 0 3 33.33 100 74 13 10 1 1 1 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATATTAG... 24 0 6 16.33 98 8 48 42 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATATTAGTAG 27 0 6 13.00 78 0 70 8 0 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTTTGGG....................................................................................................... 25 0 3 12.33 37 23 1 3 10 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCCTTTGGG....................................................................................................... 24 0 3 8.00 24 18 2 1 1 0 2 0 0 0
...................................................GAGTACTTGAGAATGCCCTTTG......................................................................................................... 22 0 3 6.33 19 18 0 1 0 0 0 0 0 0
...........................................................................................................TATTTCGGAGCTCTTGAGAGACTT............................................... 24 0 4 5.75 23 9 11 3 0 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTTTG......................................................................................................... 23 0 3 4.67 14 9 1 4 0 0 0 0 0 0
................................................TATGAGTACTTGAGAATGCCCTT........................................................................................................... 23 0 3 3.67 11 10 0 1 0 0 0 0 0 0
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGA...................................................... 26 0 3 2.67 8 1 7 0 0 0 0 0 0 0
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTG....................................................... 26 0 3 2.33 7 0 7 0 0 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCCTTTGGGT...................................................................................................... 25 0 3 2.33 7 7 0 0 0 0 0 0 0 0
....................................................AGTACTTGAGAATGCCCTTTGG........................................................................................................ 22 0 3 2.33 7 7 0 0 0 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTTTGGGT...................................................................................................... 26 0 3 2.00 6 5 1 0 0 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCCTT........................................................................................................... 20 0 3 2.00 6 6 0 0 0 0 0 0 0 0
.........................................AGGACAGTATGAGTACTTGAGAATGC............................................................................................................... 26 0 3 1.67 5 0 5 0 0 0 0 0 0 0
................................................TATGAGTACTTGAGAATGCCCTTTGG........................................................................................................ 26 0 3 1.67 5 2 3 0 0 0 0 0 0 0
............................................ACAGTATGAGTACTTGAGAATGCCCTT........................................................................................................... 27 0 3 1.67 5 1 3 0 1 0 0 0 0 0
.............TTCCGTATACATCGTTTGTGACACCG........................................................................................................................................... 26 0 8 1.38 11 5 4 1 1 0 0 0 0 0
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTGA...................................................... 27 0 3 1.33 4 1 2 1 0 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCCTTT.......................................................................................................... 21 0 3 1.33 4 4 0 0 0 0 0 0 0 0
...........................................................................................................TATTTCGGAGCTCTTGAGAGACT................................................ 23 0 4 1.25 5 2 1 1 1 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGTGACA.............................................................................................................................................. 27 0 8 1.13 9 0 8 0 1 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGTGA................................................................................................................................................ 25 0 8 1.13 9 2 4 2 0 1 0 0 0 0
.................................................................................................TTCAAAGATTTATTTCGGAGCTCT......................................................... 24 0 3 1.00 3 1 2 0 0 0 0 0 0 0
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGAGA.................................................... 28 0 3 1.00 3 0 3 0 0 0 0 0 0 0
............................TTGTGACACCGTAAGGACAGTATGAG............................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................ATGAGTACTTGAGAATGCCCTTTGG........................................................................................................ 25 0 3 1.00 3 2 0 0 1 0 0 0 0 0
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGC...................................................... 26 1 3 1.00 3 1 2 0 0 0 0 0 0 0
....................................................AGTACTTGAGAATGCCCTTTG......................................................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTG....................................................... 25 0 3 1.00 3 0 3 0 0 0 0 0 0 0
............................TTGTGACACCGTAAGGACAGT................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTTTGGGAT..................................................................................................... 27 1 3 1.00 3 0 0 3 0 0 0 0 0 0
..........................................................................................................TTATTTCGGAGCTCTTGAGAGACT................................................ 24 0 4 1.00 4 2 1 0 1 0 0 0 0 0
..................TATACATCGTTTGTGACACCGTAAGGA..................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................CAAAGATTTATTTCGGAGCTCTT........................................................ 23 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.............TTCCGTATACATCGTTTGTGACACC............................................................................................................................................ 25 0 8 1.00 8 5 3 0 0 0 0 0 0 0
...................................................................................................CAAAGATTTATTTCGGAGCTCTTG....................................................... 24 0 3 1.00 3 1 2 0 0 0 0 0 0 0
..............TCCGTATACATCGTTTGTGACACCGT.......................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGAG..................................................... 27 0 3 1.00 3 1 2 0 0 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGTGAC............................................................................................................................................... 26 0 8 0.75 6 2 1 1 0 1 0 0 0 1
...........................................................................................................TATTTCGGAGCTCTTGAGAG................................................... 20 0 4 0.75 3 0 0 0 3 0 0 0 0 0
..........................................................................................................TTATTTCGGAGCTCTTGAGAGACTT............................................... 25 0 4 0.75 3 0 3 0 0 0 0 0 0 0
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTGT...................................................... 27 1 3 0.67 2 0 2 0 0 0 0 0 0 0
...................................................GATTACTTGAGAATGCCCTTTGG........................................................................................................ 23 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...................................................................................................CAAAGATTTATTTCGGAGCTCT......................................................... 22 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.................................................ATGAGTACTTGAGAATGCCCTT........................................................................................................... 22 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.....................................................GTACTTGAGAATGCCCTTTGG........................................................................................................ 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTT........................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCC............................................................................................................. 18 0 3 0.67 2 0 0 0 0 0 2 0 0 0
.....................................................GTACTTGAGAATGCCCTTTGGG....................................................................................................... 22 0 3 0.67 2 1 0 0 0 0 1 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATATTA.... 23 0 6 0.67 4 0 3 0 1 0 0 0 0 0
................................................................................................TTTCAAAGATTTATTTCGGAGCTCT......................................................... 25 0 3 0.67 2 0 2 0 0 0 0 0 0 0
..........................................GGACAGTATGAGTACTTGAGAATGCCCT............................................................................................................ 28 0 3 0.67 2 1 0 0 1 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGTGACACC............................................................................................................................................ 29 0 8 0.63 5 0 3 0 0 2 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGTGACAC............................................................................................................................................. 28 0 8 0.63 5 2 3 0 0 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGTG................................................................................................................................................. 24 0 8 0.63 5 2 3 0 0 0 0 0 0 0
.............................................................................................................................................................ACATGGATGATATATTAGTAG 21 0 6 0.50 3 0 0 3 0 0 0 0 0 0
...................................................................................TGGATCCGCTATTTTTCAAAGATT....................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................................TTTATTTCGGAGCTCTTGAGAGACTT............................................... 26 0 4 0.50 2 0 1 1 0 0 0 0 0 0
............................................................................................................................................CAAAAGCATTGTAGTGTACATGGATG............ 26 0 4 0.50 2 0 2 0 0 0 0 0 0 0
................................................TATGAGTACTTGAGAATGC............................................................................................................... 19 0 4 0.50 2 0 2 0 0 0 0 0 0 0
......................................................................................................................................................ATAGTGTACATGGATGATATATTAGTAG 28 1 6 0.50 3 0 3 0 0 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGTGAA............................................................................................................................................... 26 1 8 0.50 4 0 0 4 0 0 0 0 0 0
..............................................................................................................TTCGGAGCTCTTGAGAGACTTTAA............................................ 24 1 4 0.50 2 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................TGTAGTGTACATGGATGATATATTAG... 26 0 5 0.40 2 1 1 0 0 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGT.................................................................................................................................................. 23 0 8 0.38 3 2 1 0 0 0 0 0 0 0
...............CCGTATACATCGTTTGTGACACCG........................................................................................................................................... 24 0 8 0.38 3 3 0 0 0 0 0 0 0 0
.............TTCCGTATACATCGTTTGTGAC............................................................................................................................................... 22 0 8 0.38 3 2 1 0 0 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTG................................................................................................................................................... 22 0 8 0.38 3 1 0 2 0 0 0 0 0 0
............................................................................................TATTTTTCAAAGATTTATTTCGGAGC............................................................ 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTTCATGGATGATATATTAGTAG 27 1 6 0.33 2 0 2 0 0 0 0 0 0 0
.................................................ATGAGTACTTGAGAATGCCCTTTG......................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCCTTTGGAA...................................................................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTA....................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0
...................................................GAGTACTTGGGAATGCCCTTTGG........................................................................................................ 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTTT.......................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................CTTGAGAATGCCCTTTGGGTT..................................................................................................... 21 0 3 0.33 1 0 0 0 0 0 0 1 0 0
...................................................GCGTACTTGAGAATGCCCTTTG......................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................ATAGTGTACATGGATGATATATTAG... 25 1 6 0.33 2 0 0 2 0 0 0 0 0 0
................................................TATGAGTACTTGAGAATGCCCTTTAA........................................................................................................ 26 2 3 0.33 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................GAACAAAAGCATTGTAGTGTACATGGA.............. 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCTTTGGGTT..................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTTGAGAATGCCCTTTGG........................................................................................................ 24 1 3 0.33 1 0 0 0 0 1 0 0 0 0
..................................................TGAGTACTTGAGATTGCCCTTTGG........................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................TGAGTACCTGAGAATGCCCTTTGG........................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................TGAGTACTTGAGAATGCCCGTTGG........................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................TTAGTACTTGAGAATGCCCTTTGGGTTT.................................................................................................... 28 2 3 0.33 1 0 0 0 0 1 0 0 0 0
................................................TATGAGTACTTGAGAATGCCCTTTG......................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................................CAAAGATTTATTTCGGAGCTCTTGA...................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................GACTACTTGAGAATGCCCTTTGTA....................................................................................................... 24 3 3 0.33 1 0 0 0 0 1 0 0 0 0
........................................AAGGACAGTATGAGTACTTGAGAATGC............................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0
..................................................................................................TCAAAGATTTATTTCGGAGCTCT......................................................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................AGTGTACATGGATGATATATTAGTAG 26 0 6 0.33 2 0 1 1 0 0 0 0 0 0
....................................................AGTACTTGAGAATGCCCTT........................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................TACTTGAGAATGCCCTTTGGG....................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................TGAGCACTTGAGAATGCCCTTTGG........................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................ACTTGAGAATGCCCTTTGGGTTAAA.................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCCT............................................................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................CTGAGTACTTGAGAATGCCCTTTGG........................................................................................................ 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0
..................................................................................................TCAAAGATTTATTTCGGAGCTTTTG....................................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0
....................................................................................................AAAGATTTATTTCGGAGCTCTT........................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................GAGTACTTGAGAATGCCCTTTGGGTT..................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................................TTTTCAAAGATTTATTTCGGAGCTCT......................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.................................................ATGAGTACTTGAGAATGCCCT............................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................CAGTATGAGTACTTGAGAATGCCCTT........................................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................AAAGCATTGTAGTGTACATGGATGATA......... 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0
..................................................TGCGTACTTGAGAATGCCCTTTGG........................................................................................................ 24 1 3 0.33 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATATT..... 22 0 6 0.33 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATTATATATTAGTAG 27 1 6 0.33 2 0 2 0 0 0 0 0 0 0
.....................................................GTACTTGAGAATGCCCTTTGGGT...................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................ATGAGTACTTGAGAATGCCCTTTGGG....................................................................................................... 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0
....................................................CGTACTTGAGAATGCCCTTTGGG....................................................................................................... 23 1 3 0.33 1 0 0 0 0 0 0 0 1 0
.................................................................................................TTCAAAGATTTATTTCGGAGCTC.......................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................GTACTTGAGAATGCCCTTTGGGTA..................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................CAGGACAGTATGAGTTCTTGA..................................................................................................................... 21 2 3 0.33 1 0 0 0 0 0 0 1 0 0
...................................................GAGTACTTGAGAATGCCCTTTGGTAAA.................................................................................................... 27 3 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................AAAGATTTATTTCGGAGCTCTTGAG..................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0
........................................CAGCACAGTATGAGTTCTTGAG.................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 1 0 0
...................................................GAGTACTTGAGAATGCCCTTTGGA....................................................................................................... 24 1 3 0.33 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATAT...... 21 0 6 0.33 2 0 0 1 1 0 0 0 0 0
..........................................GGACAGTATGAGTACTTGAGAATGCCC............................................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................GGGTACTTGAGAATGCCCTTTGT........................................................................................................ 23 2 3 0.33 1 0 0 0 0 1 0 0 0 0
................................................................................................TTTCAAAGATTTATTTCGGAG............................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.............TTCCGTATACATCGTTTGTGACA.............................................................................................................................................. 23 0 8 0.25 2 0 1 1 0 0 0 0 0 0
..........CAGTTCCGTATACATCGTTTGTGACAC............................................................................................................................................. 27 0 8 0.25 2 1 1 0 0 0 0 0 0 0
..........................................GGACAGTATGAGTACTTGAGAATGC............................................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..........................................................................................................TTATTTCGGAGCTCTTGAGAG................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................................................TATTTCGGAGCTCTTGAGAGAC................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..............TCCGTATACATCGTTTGTGACACC............................................................................................................................................ 24 0 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................GACAGTATGAGTACTTGAG.................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..........CAGTTCCGTATACATCGTTTGTGAC............................................................................................................................................... 25 0 8 0.25 2 1 0 1 0 0 0 0 0 0
..........TAGTTCCGTATACATCGTTTGTGACACC............................................................................................................................................ 28 1 8 0.25 2 2 0 0 0 0 0 0 0 0
..........CAGTTCCGTATACATCGTTTGTGA................................................................................................................................................ 24 0 8 0.25 2 1 1 0 0 0 0 0 0 0
...........................................................................................................TATTTCGGAGCTCTTGAGAGA.................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TTCGGAGCTCTTGAGAGACTTT.............................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TTATTTCGGAGCTCTTGAGAGAC................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AACAAAAGCATTGTATTGTAC................... 21 1 4 0.25 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TTTCGGAGCTCTTGAGAGACTTTAT............................................ 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..........TAGTTCCGTATACATCGTTTGTGACAC............................................................................................................................................. 27 1 8 0.25 2 1 1 0 0 0 0 0 0 0
...........................................................GAGAATGCCCTTTGGGTTAAAA................................................................................................. 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTAGTGTACATGGATGATATAT...... 23 0 5 0.20 1 0 0 0 1 0 0 0 0 0
............................................................................TAAAAAATGGATCCGCTA.................................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................GTAGTGTACATGGATGATATATTAG... 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TGTAGTGTACATGGATGATATA....... 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TTATTTCGGAGCTCTTGAG..................................................... 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................GTGTACATGGATGATATATTAGTA. 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................AGTGTACATGGATGATATATTGGTAG 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0
.........................................................................................................TTTATTTCGGAGCTCTTGAGA.................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGAAATATTAGTAG 27 1 6 0.17 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTTCATGGATGATATATTAGA.. 25 2 6 0.17 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................AGTGTACATGGATGATATATTAGT.. 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATATAAG... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATTAG..... 22 3 6 0.17 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTTCATGGATGATATATTAG... 24 1 6 0.17 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................TAGTGTACATGGATGATATATTAGA.. 25 1 6 0.17 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................TTGTAGTGTACATGGATG............ 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0
............GTTCCGTATACATCGTTTGTGA................................................................................................................................................ 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..........TAGTTCCGTATACATCGTTTGTG................................................................................................................................................. 23 1 8 0.13 1 1 0 0 0 0 0 0 0 0
........ATCAGTTCCGTATACATCGTT..................................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..............TCCGTATACATCGTTTGTGAC............................................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0
............GTTCCGTATACATCGTTTGTGACACC............................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.........TTAGTTCCGTATACATCGTTTGTGA................................................................................................................................................ 25 1 8 0.13 1 0 0 0 1 0 0 0 0 0
............GTTCCGTATACATCGTTTGTGAC............................................................................................................................................... 23 0 8 0.13 1 0 0 0 0 0 0 0 0 1
...............CCGTATACATCGTTTGTGACACC............................................................................................................................................ 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0
................CGTATACATCGTTTGTGACACCG........................................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.........TCAGTTCCGTATACATCGTT..................................................................................................................................................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..............TCCGTATACATCGTTTGTGACACCG........................................................................................................................................... 25 0 8 0.13 1 0 1 0 0 0 0 0 0 0
.........TCAGTTCCGTATACATCGTTTGA.................................................................................................................................................. 23 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.....AAAATCAGTTCCGTATACATCGT...................................................................................................................................................... 23 0 8 0.13 1 0 0 0 1 0 0 0 0 0
..............TCCGTATACATCGTTTGTGACCCC............................................................................................................................................ 24 1 8 0.13 1 0 0 0 0 1 0 0 0 0
.......AATCAGTTCCGTATACATCGTTTG................................................................................................................................................... 24 0 8 0.13 1 0 1 0 0 0 0 0 0 0
.........TCAGCTCCGTATACATCGTTTGTGACAC............................................................................................................................................. 28 1 8 0.13 1 0 1 0 0 0 0 0 0 0
............GTTCCGTATACATCGTTTGTGACA.............................................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.........TTAGTTCCGTATACATCGTTTG................................................................................................................................................... 22 1 8 0.13 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................AAGCATTGTAATGGACATG................ 19 2 8 0.13 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................TTTTTAAGAACAAAAGCTT............................. 19 2 11 0.09 1 1 0 0 0 0 0 0 0 0
.................................................................................AATGGATCGGGTAGTTTTCA............................................................................. 20 3 15 0.07 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................AAGCATTGTTATGTACCTG................ 19 3 18 0.06 1 0 0 0 0 0 1 0 0 0
................................................TATGAGTTCTTTGGAATGCC.............................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................GCATCGTCTGTGAAACCGT.......................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTTCTTTTTAGTCAAGGCATATGTAGCAAACACTGTGGCATTCCTGTCATACTCATGAACTCTTACGGGAAACCCAATTTTTTACCTAGGCGATAAAAAGTTTCTAAATAAAGCCTCGAGAACTCTCTGAAATAATTCTTGTTTTCGTAACATCACATGTACCTACTATATAATCATC
***************************************((....))..((((.((((.(((((((..((((..((((((.((((((((.....))))))))....))))))....)).)))))))))..))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
 V112
male body		 M022
male body		 M062
head
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAAT............................................. 24 0 4 93.00 372 259 70 30 11 0 0 2 0
..............................................................................................................................................TTTCGTAACATCACATGTACCTACTAT......... 27 0 3 14.33 43 43 0 0 0 0 0 0 0
.....................................................CATGAACTCTTACGGGAAACCCAAT.................................................................................................... 25 0 3 13.33 40 29 2 9 0 0 0 0 0
................................................................................................................................................TCGTAACATCACATGTACCTACTAT......... 25 0 3 11.00 33 30 0 2 0 1 0 0 0
..............................................................................................................AAGCCTCGAGAACTCTCTGAAAT............................................. 23 0 4 10.25 41 33 6 0 2 0 0 0 0
..........................................................................................CGATAAAAAGTTTCTAAATAAAGCCTC............................................................. 27 0 3 7.33 22 2 15 0 5 0 0 0 0
..............................................................................TTTTTACCTAGGCGATAAAAAGTTTCT......................................................................... 27 0 2 7.00 14 14 0 0 0 0 0 0 0
...............................................................................................................................................TTCGTAACATCACATGTACCTACTAT......... 26 0 3 6.33 19 17 0 2 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAA.............................................. 23 0 4 5.75 23 23 0 0 0 0 0 0 0
..................................................................................TACCTAGGCGATAAAAAGTTTCTAAAT..................................................................... 27 0 2 5.50 11 8 2 1 0 0 0 0 0
.....................................................................................................TTCTAAATAAAGCCTCGAGAACTCT.................................................... 25 0 3 5.33 16 9 3 3 1 0 0 0 0
...............................................................................................................AGCCTCGAGAACTCTCTGAAAT............................................. 22 0 4 4.50 18 15 0 0 2 0 1 0 0
............................................................................................................AAAAGCCTCGAGAACTCTCTGAAAT............................................. 25 1 4 4.25 17 16 1 0 0 0 0 0 0
.........................................................................................................................................CTTGTTTTCGTAACATCACATGTA................. 24 0 3 4.00 12 11 1 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAATAAT.......................................... 27 0 4 3.75 15 5 7 3 0 0 0 0 0
CTTCTTTTTAGTCAAGGCATATGT.......................................................................................................................................................... 24 0 8 3.50 28 22 1 2 2 1 0 0 0
....................................................................................................................................................AACATCACATGTACCTACTATATAAT.... 26 0 5 3.40 17 13 2 2 0 0 0 0 0
...................................................CTCATGAACTCTTACGGGAAACCCAAT.................................................................................................... 27 0 3 3.33 10 8 0 2 0 0 0 0 0
.................................................................................................................................................CGTAACATCACATGTACCTACTAT......... 24 0 3 3.33 10 8 0 1 0 1 0 0 0
...................................................................................ACCTAGGCGATAAAAAGTTTCTAAAT..................................................................... 26 0 2 3.00 6 5 1 0 0 0 0 0 0
..........................................................................................CGATAAAAAGTTTCTAAATAAAGCCT.............................................................. 26 0 3 3.00 9 3 6 0 0 0 0 0 0
....................................................................................CCTAGGCGATAAAAAGTTTCTAAAT..................................................................... 25 0 2 3.00 6 5 0 1 0 0 0 0 0
..............................................................................TTTTTACCTAGGCGATAAAAAGTTT........................................................................... 25 0 2 2.50 5 3 0 2 0 0 0 0 0
...........................................................................................................ATAAAGCCTCGAGAACTCTCTGAAAT............................................. 26 0 4 2.50 10 2 8 0 0 0 0 0 0
..................................................ACTCATGAACTCTTACGGGAAACCCAAT.................................................................................................... 28 0 3 2.33 7 6 0 1 0 0 0 0 0
.....................................................CATGAACTCTTACGGGAAACCCAATT................................................................................................... 26 0 3 2.33 7 6 1 0 0 0 0 0 0
........................................................GAACTCTTACGGGAAACCCAAT.................................................................................................... 22 0 3 2.33 7 7 0 0 0 0 0 0 0
.......TTAGTCAAGGCATATGTAGCAAACACT................................................................................................................................................ 27 0 8 2.00 16 13 2 0 0 1 0 0 0
........................................................GAACTCTTACGGGAAACCCAATTTTT................................................................................................ 26 0 3 2.00 6 4 0 1 0 1 0 0 0
..................................GTGGCATTCCTGTCATACTCATGAACT..................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................................................AAGCCTCGAGAACTCTCTGAAA.............................................. 22 0 4 2.00 8 8 0 0 0 0 0 0 0
..........................................................................................................................................TTGTTTTCGTAACATCACATGTA................. 23 0 4 2.00 8 7 0 1 0 0 0 0 0
...............................................................................................................................................ATCGTAACATCACATGTACCTACTAT......... 26 1 3 2.00 6 6 0 0 0 0 0 0 0
..............................................................................................................................................TTTCGTAACATCACATGTACCTACTA.......... 26 0 3 1.67 5 5 0 0 0 0 0 0 0
...............................................................................................AAAAGTTTCTAAATAAAGCCTCGAGAAC....................................................... 28 0 3 1.67 5 0 5 0 0 0 0 0 0
................................................................................................................................................TCGTAACATCACATGTACCTACTATAT....... 27 0 3 1.67 5 4 0 0 0 0 1 0 0
.................................................................................TTACCTAGGCGATAAAAAGTTTCTAAAT..................................................................... 28 0 2 1.50 3 2 0 1 0 0 0 0 0
.....................................................CATGAACTCTTACGGGAAACCCAATTT.................................................................................................. 27 0 3 1.33 4 4 0 0 0 0 0 0 0
..................................................................................................AGTTTCTAAATAAAGCCTCGAGAACT...................................................... 26 0 3 1.33 4 3 0 1 0 0 0 0 0
............................................................................................................................................GTTTTCGTAACATCACATGTACCTACTAT......... 29 0 3 1.33 4 4 0 0 0 0 0 0 0
......................................................ATGAACTCTTACGGGAAACCCAAT.................................................................................................... 24 0 3 1.33 4 4 0 0 0 0 0 0 0
..................................................................................................GAGTTCTAAATAAAGCCTCGAGAACTCTCT.................................................. 30 3 3 1.33 4 0 4 0 0 0 0 0 0
.....................................................................................................TTCTAAATAAAGCCTCGAGAACTCTCT.................................................. 27 0 3 1.33 4 4 0 0 0 0 0 0 0
........................................TTCCTGTCATACTCATGAACT..................................................................................................................... 21 0 3 1.33 4 4 0 0 0 0 0 0 0
...............................................................................................................AGCCTCGAGAACTCTCTGAAATAAT.......................................... 25 0 4 1.25 5 3 2 0 0 0 0 0 0
.......................................................................................................CTAAATAAAGCCTCGAGAACTCTCT.................................................. 25 0 4 1.25 5 1 3 0 1 0 0 0 0
..............................................................................TTTTTACCTAGGCGATAAAAAGT............................................................................. 23 0 4 1.25 5 4 0 0 0 0 1 0 0
CTTCTTTTTAGTCAAGGCATATGTA......................................................................................................................................................... 25 0 8 1.25 10 10 0 0 0 0 0 0 0
............CAAGGCATATGTAGCAAACACTGT.............................................................................................................................................. 24 0 8 1.13 9 9 0 0 0 0 0 0 0
....................................GGCATTCCTGTCATACGCATGAACTCT................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................TAAAGCCTCGAGAACTCTCTGAAAT............................................. 25 0 4 1.00 4 4 0 0 0 0 0 0 0
........................................................................................GGCGATAAAAAGTTTCTAAAT..................................................................... 21 0 2 1.00 2 2 0 0 0 0 0 0 0
...............................................................................TTTTACCTAGGCGATAAAAAGTTT........................................................................... 24 0 2 1.00 2 2 0 0 0 0 0 0 0
.................................................................................................................................................CGTAACATCACATGTACCTACTATAT....... 26 0 3 1.00 3 2 0 1 0 0 0 0 0
..................................................................................TACCTAGGCGATAAAAAGTTTCTAAA...................................................................... 26 0 2 1.00 2 2 0 0 0 0 0 0 0
.................................................................................................................................................CGTAACATCACAAGTACCTACTAT......... 24 1 3 1.00 3 3 0 0 0 0 0 0 0
...................................TGGCATTCCTGTCATACTCATGAACT..................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................CATGAACTCTTACGGGAAACCCAA..................................................................................................... 24 0 3 1.00 3 3 0 0 0 0 0 0 0
.........................................................................................................AAATAAAGCCTCGAGAACTCTCTGAAAT............................................. 28 0 4 1.00 4 1 3 0 0 0 0 0 0
...........................................................................................GATAAAAAGTTTCTAAATAAAGCCTC............................................................. 26 0 3 1.00 3 2 0 1 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAATCAGT......................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................TTACCTAGGCGATAAAAAGTTTCT......................................................................... 24 0 2 1.00 2 2 0 0 0 0 0 0 0
....................................GGCATTCCTGTCATACTCATGAACT..................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................GAACTCTTACGGGAAACCCAATTTT................................................................................................. 25 0 3 1.00 3 2 1 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAA............................................... 22 0 4 0.75 3 3 0 0 0 0 0 0 0
................................................................................................................GCCTCGAGAACTCTCTGAAAT............................................. 21 0 4 0.75 3 3 0 0 0 0 0 0 0
....................................................................GAAACCCAATTTTTTACCTAGGCGAT.................................................................................... 26 0 4 0.75 3 1 0 2 0 0 0 0 0
..............................................................................................................................................TTTCGTAACATCACATGTACCTACT........... 25 0 3 0.67 2 2 0 0 0 0 0 0 0
............................................................................................................................................GTTTTCGTAACATCACATGTACCTACTA.......... 28 0 3 0.67 2 2 0 0 0 0 0 0 0
.......................................................................................................CTAAATAAAGCCTCGAGAACTCT.................................................... 23 0 6 0.67 4 3 0 1 0 0 0 0 0
.........................................TCCTGTCATACTCATGAACTCTTACG............................................................................................................... 26 0 3 0.67 2 1 0 1 0 0 0 0 0
........................................................GAACTCTTACGGGAAACCCAATTTTTT............................................................................................... 27 0 3 0.67 2 2 0 0 0 0 0 0 0
......................................................................................................TCTAAATAAAGCCTCGAGAACTCT.................................................... 24 0 6 0.67 4 3 0 1 0 0 0 0 0
......................................................ATGAACTCTTACGGGAAACCCAATT................................................................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0
........................................................GAACTCTTACGGGAAACCCAATTT.................................................................................................. 24 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................................ACATGAACTCTTACGGGAAACCCAAT.................................................................................................... 26 1 3 0.67 2 2 0 0 0 0 0 0 0
.............................................................................................TAAAAAGTTTCTAAATAAAGCCTC............................................................. 24 0 3 0.67 2 0 0 1 1 0 0 0 0
................................................................................................................................................TCGTAACATCACATGTACCTACTA.......... 24 0 3 0.67 2 2 0 0 0 0 0 0 0
............................................................................................ATAAAAAGTTTCTAAATAAAGCCTC............................................................. 25 0 3 0.67 2 0 0 0 2 0 0 0 0
............................................................................................................................................GTTTTCGTAACATCACATGTACCTACT........... 27 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................................TCATGAACTCTTACGGGAAACCCAAT.................................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0
..............................................................................................AAAAAGTTTCTAAATAAAGCCTC............................................................. 23 0 3 0.67 2 0 1 0 1 0 0 0 0
..................................................................................................................................................GTAACATCACATGTACCTACTAT......... 23 0 5 0.60 3 3 0 0 0 0 0 0 0
...............................................................................TTTTACCTAGGCGATAAAAAGT............................................................................. 22 0 5 0.60 3 3 0 0 0 0 0 0 0
.....................................................................................................................................................ACATCACATGTACCTACTATATAAT.... 25 0 5 0.60 3 3 0 0 0 0 0 0 0
...........................................................................................................ATAAAGCCTCGAGAACTCTCTGAAA.............................................. 25 0 4 0.50 2 0 0 0 2 0 0 0 0
..................................................................................TACCTAGGCGATAAAAAGTTTCAAAAT..................................................................... 27 1 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................................GCGATAAAAAGTTTCTAAA...................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................TACCTAGGCGATAAAAAGTTTC.......................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................TAGGCGATAAAAAGTTTCTAAAT..................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................................GCGATAAAAAGTTTCTAAATAAAGCCT.............................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................CCTAGGCGATAAAAAGTTTCTAAATA.................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................TTTTTTACCTAGGCGATAAAAAGTT............................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................TTACCTAGGCGATAAAAAGTTT........................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................AAGCCTCGAGAACTCTCTGAAATAAT.......................................... 26 0 4 0.50 2 1 1 0 0 0 0 0 0
.........AGTCAAGGCATATGTAGCAAACACTGT.............................................................................................................................................. 27 0 8 0.50 4 4 0 0 0 0 0 0 0
................................................................................TTTACCTAGGCGATAAAAAGTTTCT......................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................CCTAGGCGATAAAAAGTTTCT......................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................TTACCAGGCGATAAAAAGTTTCTAAAT..................................................................... 27 3 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................TTTTTACCTAGGCGATAAAAAGTT............................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................TTTTACCTAGGCGATAAAAAGTTTCT......................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................GCGATAAAAAGTTTCTAAAT..................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................TACCTAGGCGATAAAAAGTTTCT......................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................GGAAACCCAATTTTTTACCTAGGCGAT.................................................................................... 27 0 4 0.50 2 0 0 2 0 0 0 0 0
.................................................................................TTACCTAGGCGATAAAAAGTTTCTA........................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................AAAAGCCTCGAGAACTCTCTGAAA.............................................. 24 1 4 0.50 2 2 0 0 0 0 0 0 0
...........................................................................................................................................TGTTTTCGTAACATCACATGTA................. 22 0 4 0.50 2 2 0 0 0 0 0 0 0
................................................................................TTTACCTAGGCGATAAAAAG.............................................................................. 20 0 5 0.40 2 0 0 2 0 0 0 0 0
......................................................................................................................................................CATCACATGTACCTACTATATAAT.... 24 0 5 0.40 2 2 0 0 0 0 0 0 0
.....................................................................AAACCCAATTTTTTACCTAGGCGAT.................................................................................... 25 0 5 0.40 2 2 0 0 0 0 0 0 0
CTTCTTTTTAGTCAAGGCATAT............................................................................................................................................................ 22 0 8 0.38 3 0 3 0 0 0 0 0 0
..........GTCAAGGCATATGTAGCAAACACTGT.............................................................................................................................................. 26 0 8 0.38 3 3 0 0 0 0 0 0 0
.....TTTTAGTCAAGGCATATGTAGCAAA.................................................................................................................................................... 25 0 8 0.38 3 3 0 0 0 0 0 0 0
.......ATAGTCAAGGCATATGTAGCAAACACT................................................................................................................................................ 27 1 8 0.38 3 3 0 0 0 0 0 0 0
.........AGTCAAGGCATATGTAGCAAACACT................................................................................................................................................ 25 0 8 0.38 3 3 0 0 0 0 0 0 0
.......TTAGTCAAGGCATATGTAGCAAA.................................................................................................................................................... 23 0 8 0.38 3 0 3 0 0 0 0 0 0
..........GTCAAGGCATATGTAGCAAACACT................................................................................................................................................ 24 0 8 0.38 3 3 0 0 0 0 0 0 0
CTTCTTTTTAGTCAAGGCATATG........................................................................................................................................................... 23 0 8 0.38 3 2 1 0 0 0 0 0 0
...........TCAAGGCATATGTAGCAAACACT................................................................................................................................................ 23 0 8 0.38 3 2 0 1 0 0 0 0 0
................................................................................................................................................CCGTAACATCACATGTACCTACTAT......... 25 1 3 0.33 1 0 0 0 0 0 0 0 1
...................................................CTCATGAACTCTTACGGGAAACCCAA..................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................CTTGTTTTCGTAACATCACATGTACC............... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................CATGAACTCTTACGGGAAACCCAAGT................................................................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0 0
....................................................TCATGAACTCTTACGGGAAACCCAATT................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................ACTCATGAACTCTTACGGGAAACCCA...................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................................................................................CGTAACATCACATGTACCTACTATA........ 25 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................CATGAACTCTTACGGGAAACCCAATGT.................................................................................................. 27 1 3 0.33 1 0 0 1 0 0 0 0 0
.................................................................................................................................................CGTAACATCACAAGTACCTACT........... 22 1 3 0.33 1 1 0 0 0 0 0 0 0
.........................................TCCTGTCATACTCATGAACTCTTAC................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................TTCTAAATAAAGCCTCGAGAACTCTC................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................TCGTAACATCACATGTGCCTACTAT......... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
.................................................AACTCATGAACTCTTACGGGAAACCCAA..................................................................................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................CCGTAACATCACATGTACCTACTATAT....... 27 1 3 0.33 1 0 0 1 0 0 0 0 0
.....................................................AATGAACTCTTACGGGAAACCCAAT.................................................................................................... 25 1 3 0.33 1 0 0 0 0 1 0 0 0
..............................................................................................................................................TTTCGTAACATCACATGTACCTACTATA........ 28 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................CTTACGGGAAACCCAATTTTTTACC............................................................................................ 25 0 6 0.33 2 0 0 0 2 0 0 0 0
.........................................TCCTGTCATACTCATGAACTCTTA................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................TCGTAACATCACAAGTACCTACTAT......... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
.........................................TCCTGTCATACTCATGAACT..................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TTCGTAACATCACATGTACCTACTATC........ 27 1 3 0.33 1 0 0 1 0 0 0 0 0
.....................................................AAAGAACTCTTACGGGAAACCCAATTTT................................................................................................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................AAAAAAGTTTCTAAATAAAGCCTCGAGAA........................................................ 29 1 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................AAAAGTTTCTAAATAAAGCCTC............................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................TTTCGTAACATCACAAGTACCTACTAT......... 27 1 3 0.33 1 0 0 0 0 0 1 0 0
.................................................AACTCATGAACTCTTACGGGAAACCCAAT.................................................................................................... 29 1 3 0.33 1 1 0 0 0 0 0 0 0
...............................................CATACTCATGAACTCTTACGGGAAACCC....................................................................................................... 28 0 3 0.33 1 0 0 0 0 1 0 0 0
...................................................................................................GTTTCTAAATAAAGCCTCGAGAACTCTC................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................CTCATGAACTCTTACGGGAAACCCAATT................................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................TTCCTGTCATACTCATGAACTCTT.................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................GAACTCTTACGGGAAACCCAATTTA................................................................................................. 25 1 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TTCGTAACATCACATGTACCTACTA.......... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................ACTCATGAACTCTTACGGGAA........................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TTCGTAACATCACATGTACCTACTATA........ 27 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................TGAACTCTTACGGGAAACCCAAT.................................................................................................... 23 0 3 0.33 1 0 0 0 0 1 0 0 0
............................................................TCTTACGGGAAACCCAATTTTTTACCT........................................................................................... 27 0 6 0.33 2 1 0 0 1 0 0 0 0
....................................................TCATGAACTCTTACGGGAAACCCAATTT.................................................................................................. 28 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................ATCGTAACATCACATGTACCTACTATAT....... 28 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................TCGTAACATCACATGTACCTACTATA........ 26 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................................AGTTTCTAAATAAAGCCTCGAGAACTCT.................................................... 28 0 3 0.33 1 0 1 0 0 0 0 0 0
.........................................TCCTGTCATACTCATTAACT..................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................GATAAAAAGTTTCTAAATAAAGCC............................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TTCGTAACATCACAAGTACCTACTA.......... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................GGTTCTAAATAAAGCCCCGAGAACTCT.................................................... 27 2 3 0.33 1 1 0 0 0 0 0 0 0
.................................................TACTCATGAACTCTTACGGGAAACCCAAT.................................................................................................... 29 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................ACGTAACATCACATGTACCTACTAT......... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................AAAAAGTTTCTAAATAAAGCCTCGA........................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................CGGGAAACCCAATTTTTTACCTAGGCGAT.................................................................................... 29 0 4 0.25 1 1 0 0 0 0 0 0 0
...CTTTTTAGTCAAGGCATATGTAGCAAA.................................................................................................................................................... 27 0 8 0.25 2 2 0 0 0 0 0 0 0
..................................................................GGGAAACCCAATTTTTTACCTAGGCGAT.................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGTAAT............................................. 24 1 4 0.25 1 0 0 1 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACCCTCTGAAAT............................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0
.........................................................................................................AAATAAAGCCTCGAGAACTCTCTGAA............................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0
................................................................................................................GCCTCGAGAACTCTCTGAAATAAT.......................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0
..TCTTTTTAGTCAAGGCATATGT.......................................................................................................................................................... 22 0 8 0.25 2 2 0 0 0 0 0 0 0
..TCTTTTTAGTCAAGGCATATGTA......................................................................................................................................................... 23 0 8 0.25 2 2 0 0 0 0 0 0 0
...............................................................................................................TGCCTCGAGAACTCTCTGAAAT............................................. 22 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTG................................................. 20 0 4 0.25 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TTCGTAACATCACATGTA................. 18 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAATG............................................ 25 1 4 0.25 1 1 0 0 0 0 0 0 0
......TTTAGTCAAGGCATATGTAGCAAA.................................................................................................................................................... 24 0 8 0.25 2 0 2 0 0 0 0 0 0
..................................................................GGGAAACCCAATTTTTTACCTAGGCGA..................................................................................... 27 0 4 0.25 1 0 0 0 0 1 0 0 0
................................................................................................................GCCTCGAGAACTCTCTGAAATAA........................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................................TTTTCGTAACATCACATGTACCT.............. 23 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAATT............................................. 24 1 4 0.25 1 0 0 1 0 0 0 0 0
...........................................................................................................................................TGTTTTCGTAACATCACATGTACCTAC............ 27 0 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................TTTTTACCTAGGCGATAAAAAG.............................................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAG.............................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0
...........................................................................................................................................TGTTTTCGTAACATCACATGTACCTA............. 26 0 4 0.25 1 0 0 1 0 0 0 0 0
...........................................................................................................ATAAAGCCTCGAGAACTCTCT.................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAAGTCTCTGAAAT............................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAAC............................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCGGAAAT............................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0
...................................................................GGAAACCCAATTTTTTACCTAGGCGA..................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0
...............................................................................................................AGCCTCGAGAACTCTCTGAAATC............................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0
...........................................................................................................AAAAAGCCTCGAGAACTCTCTGAAAT............................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAATAA........................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................................................................TTTCGTAACATCACATGTACCTA............. 23 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGAACTCTCTGAAATA............................................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................AGAAACCCAATTTTTTACCTAGGCGAT.................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................GAAAGCCTCGAGAACTCTCTGAAA.............................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGGGAACTCTCTGAAAT............................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TTCGTAACATCACATGTACCTAC............ 23 0 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................................................GTTTTCGTAACATCACATGTACCTAC............ 26 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGCGAACTCTCTGAAAT............................................. 24 1 4 0.25 1 0 0 1 0 0 0 0 0
...........................................................................................................AAAAAGCCTCGAGAACTCTCTGA................................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTCGAGCACTCTCTGAAGT............................................. 24 2 4 0.25 1 0 0 1 0 0 0 0 0
...............................................................................................................AGCCTCGAGAACTCTCTGAAAC............................................. 22 1 4 0.25 1 1 0 0 0 0 0 0 0
.........................................ACCTGTCATACTCATGAACT..................................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0 0
...............................................................TACGGGAAACCCAATTTTTTACCTAGGCG...................................................................................... 29 0 4 0.25 1 0 0 1 0 0 0 0 0
...CTTTTTAGTCAAGGCATATGT.......................................................................................................................................................... 21 0 8 0.25 2 2 0 0 0 0 0 0 0
...........................................................................................................AAAAAGCCTCGAGAACTCTCT.................................................. 21 1 4 0.25 1 1 0 0 0 0 0 0 0
..................................................................................................................................................GTAACATCACATGTACCTACTATAT....... 25 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................ACATCACATGTACCTACTAT......... 20 0 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................................................................................TTATCATCACATATACCTACTATAT....... 25 3 5 0.20 1 1 0 0 0 0 0 0 0
...................................................................................................................................................TAACATCACATGTACCTACTATATAAT.... 27 0 5 0.20 1 1 0 0 0 0 0 0 0
....................................................................................................................................................AACATCACATGTACCTACTAT......... 21 0 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................................................................................GTAACATCACAAGTACCTACTATAT....... 25 1 5 0.20 1 1 0 0 0 0 0 0 0
...................................................................................................................................................AAACATCACAAGTACCTACTATATAAT.... 27 2 5 0.20 1 1 0 0 0 0 0 0 0
....................................................................................................................................................AACATCACATGTACCTACTATATAATC... 27 0 5 0.20 1 1 0 0 0 0 0 0 0
.............................................................................................................AAAGCCTAGAGAACTCTCTGAAAT............................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0
.......................................................................ACCCAATTTTTTACCTAGGCGAT.................................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................................CAATTTTTTACCTAGGCGATA................................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0
....................................................................................................................................................AACATCACATGTACCTACTATATAA..... 25 0 5 0.20 1 1 0 0 0 0 0 0 0
......................................................................AACCCAATTTTTTACCTAGGCGAT.................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0
...................................................................................................................TCGAGAAATCTCTGAAAT............................................. 18 1 5 0.20 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................ACATCACATGTACCTACTATATAATCAT. 28 0 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................................................................................GTAACATCACAAGTACCTACTAT......... 23 1 5 0.20 1 1 0 0 0 0 0 0 0
......................................................................................................TCTAAATAAAGCCTCGAGAACTC..................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................................................TCACATGTACCTACTATATAATCAT. 25 0 6 0.17 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................ATCACATGTACCTACTATAT....... 20 0 6 0.17 1 1 0 0 0 0 0 0 0
.................................................................CGGGAAACCCAATTTTTTAC............................................................................................. 20 0 6 0.17 1 0 0 1 0 0 0 0 0
.............................................................CTTACGGGAAACCCAATTTTTTACCT........................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................TAAATAAAGCCTCGAGAACT...................................................... 20 0 7 0.14 1 0 1 0 0 0 0 0 0
.TTCTTTTTAGTCAAGGCATATGT.......................................................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0
........TAGTCAAGGCATATGTAGCAAACAC................................................................................................................................................. 25 0 8 0.13 1 1 0 0 0 0 0 0 0
.TTCTTTTTAGTCAAGGCATAT............................................................................................................................................................ 21 0 8 0.13 1 0 0 1 0 0 0 0 0
............CAAGGCATATGTAGCAAACACTG............................................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0
..TCTTTTTAGTCAAGGCATATGTAG........................................................................................................................................................ 24 0 8 0.13 1 1 0 0 0 0 0 0 0
............TAGGGCAGATGTAGCAAACACT................................................................................................................................................ 22 3 8 0.13 1 0 0 0 0 1 0 0 0
....TTTTTAGTCAAGGCATATGTAGCAA..................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0 0
.......TTAGTCAAGGCATATGTAGCAAACAC................................................................................................................................................. 26 0 8 0.13 1 0 1 0 0 0 0 0 0
.TTCTTTTTAGTCAAGGCATATG........................................................................................................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0
.......TTAATCAAGGCATATGTAGCAAACACT................................................................................................................................................ 27 1 8 0.13 1 0 0 0 0 0 1 0 0
...........TCAAGGCATATGTAGCAAACACTG............................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0
.............AAGGCATATGTAGCAAACAC................................................................................................................................................. 20 0 8 0.13 1 1 0 0 0 0 0 0 0
........AAGTCAAGGCATATGTAGCAAACACTGT.............................................................................................................................................. 28 1 8 0.13 1 1 0 0 0 0 0 0 0
...CTTTTTAGTCAAGGCATATGTAGCA...................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0 0
........TAGTCAAGGCATATGTAGCAAACACT................................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0 0 0
CTTCTTTTTAGTCAAGGAATATGTAG........................................................................................................................................................ 26 1 8 0.13 1 0 0 0 0 1 0 0 0
...........ACAAGGCATATGTAGCAAACAC................................................................................................................................................. 22 1 8 0.13 1 0 0 1 0 0 0 0 0
.TTCTTTTTAATCAAGGCATATGT.......................................................................................................................................................... 23 1 8 0.13 1 1 0 0 0 0 0 0 0
............CAAGGCATATGTAGCAAACAC................................................................................................................................................. 21 0 8 0.13 1 1 0 0 0 0 0 0 0
.........AGTCAAGGCATATGTAGCAAACAC................................................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0
CTTCTTTTTAGTCAAGGCATATGTAG........................................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0 0 0
.TTCTTTTTAGTCAAGGCATATGTA......................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0
...CTTTTTAGTCAAGGCATATGTA......................................................................................................................................................... 22 0 8 0.13 1 0 0 0 0 1 0 0 0
.............AAGGCATATGTAGCAAACACT................................................................................................................................................ 21 0 8 0.13 1 1 0 0 0 0 0 0 0
..TCTTTTTAGTCAAGGCATATGTAGC....................................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0 0
...................................................................................................................TCAATAATTCTCTGAAATAAT.......................................... 21 3 11 0.09 1 0 0 0 0 1 0 0 0
.............................................................................................TCAAAAGTTTCTAGATTAAG................................................................. 20 3 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................GAACATGTACCTACTATAT....... 19 2 13 0.08 1 0 0 0 0 1 0 0 0
.............................................ATCATACCCACGAACTCTT.................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_30:63977-64154 + dps_112 GAAGAAAAATCAGTTCCGTATACATCGTTTGTGACACCGTAAGGACAGTATGAGTACTTGAGAATGCCCTTTGGGTTAAAAAATGGATCCGCTATTTTTCAAAGATTTATTTCGGAGCTCTTGAGAGACTTTATTAAGAACAA--AAGCATTGTAGTGTACATGGATGATATATTAGTAG
droPer2 scaffold_163:48025-48202 + GAAGAAAAATCAGTTCCGTATACATCGTTTGTGACACCGCAAGGACAGTATGAGTACTTGAGAATGCCCTTTGGGTTAAAAAATGGATCCGCTATTTTTCAAAGATTTATTTCGGAGCTCTTGAGAGACTTTATTAGGAACAA--AAGCATTGTAGTGTACATGGATGATATATTAGTAG
droWil2 scf2_1100000000485:2260-2437 + GACGAAGAGTCAGTCAAATACACATCCTTTATTACACCACTTGGACAATATGAGTTTTTAAGAATGCCAATGGGGATAAAAAACGCATCACATGTATTTCAAAGATTTATTAACCGAATTTTTGAAGATATGATTCGAAGAGG--AGAAGTCCTCGTCTACATGGACGACATCATGATAG
droVir3 scaffold_13045:1534096-1534268 - GAGGAAAAATTAATCCCGTACACTGCGTTCGTAACCCCTCATGGACAGTACGAGTATTTAAGAATACCTTTCGGGCTTAAAAATGGATCAGCCATATTTCAGAGATTTATTTCTG-----CTTAGTGACCTTATTAGAAATAA--GAGCATCGTAGTTTATATGGAAGATATAATGGTAG
droMoj3 scaffold_6498:2417762-2417939 - GAGAAAGAGTCCGTAAAATACACATCGTTTGTTACGCCGTTAGGACAGTTTGAGTTCTTGAGAATGCCTATGGGATTAAAAACTGCTCCGCAAATTTTTCAAAGGTTCATTAATGATATATTTGCAGATTTAATAAAGGAAAG--CAAGGTAATCGTATATATGGATGATATAATGATTG
droGri2 scaffold_7624:1273-1447 - GACGAAAAATCAATAGCAAAAACAGCATTCTCAACCAAAGCAGGACATTTCGAATATACGCGAATGCCATTTGGCTTGAAAAATGCACCAGCAACTTTTCAGCGTTGTATGAACAATCTTTTAAGAGACTTAATTTACAAAAA-----TTGTCTAGTTTACATGGATGACATAATAGTGT
droAna3 scaffold_12902:448966-449139 - GATGAAGAATCTATTCGAAAGACAGCTTTTTCTACAAAGCATGGTCATTTTGAGTACACCCGAATGCCATTTGGTTTAAAAAATGCACCCGCTACTTTTCAGCGATGTATGAATAACGTCTTGGGGGAACTTGTGTATAGGAA-----TTGCTTGGTTTATTTGGACGATATAATAG-TG
droBip1 scf7180000396568:787-965 - GAGAACGAATCAATTAAATATACTTCATTTATGACGCCGTTAGGACAGTTCGAATTTATGCGGATGCCAATGGGCCTAAAAAACGCACCGGCGGTGTTTCAAAGATTTATCAATAAGATTTTTGCAGACATGATAAGAGAAGGA-AAAAGTGGTTATATACATGGACGATATTATGATCG
droKik1 scf7180000299729:399-576 - GAAGAAGAGTCTGTAAAATATACCGCCTTTGTGACTCCGGACGGGCAGTTCGAATACTTGAGGATGCCTTTTGGGCTTAAAAATGGTCCCGCTGTTTTCCAAAGATTTATTTCCGACGCCTTGAGAGACTTTGTAAGAAACCG--ACAGATCGTTGTTTATATGGATGATATTATTCTAG
droFic1 scf7180000452434:12925-13102 + GAAGAAAAATCTGTGCCGTATACGGCATTTGTTACTCCTCAAGGACAGTATGAGTATTTAAGGATGCCTTTTGGATTGAAGAATGGTCCTGCAGTGTTTCAACGATTTATTTCGGAAACGTTTTCAGACTTTATAAGAAAGAA--GAGCCTTGTAATTTATATGGATGATATAGTTATAG
droEle1 scf7180000490091:10401-10578 + GAAGAAGAATCCGTGAAATATACTGCCTTTGTGACTCCGGACCGGCAGTTTGAGTATTTAAATATGCCTTTCGGGCTCAATAGTGGACCGGCTATATTCCACAGGTTTATATCTGACGTATTAAGCGATCTTGTTAGAAATCG--ACAAATTGTTGTGTATATGGATGATATAATTCTGG
droRho1 scf7180000770473:1094-1272 - GAAGAGAAATCTGTACCGTATACATCTTTCGTTACCCCTCAAGGACAATATGAGTACCTGAGAATGCCTTTTGAATTAAAGAATGGCCCTGCAGTGTTTCAAAGATTTATCTCAGAAACGTTTTCAGATTTTATAAGAAAAAAG-AGTGGATGATATAGTTATGGATAATATAGTTATTG
droBia1 scf7180000300701:2787-2966 - GAAGAAAAATCTGTGCCCTTTACGGCATTTGTTACCCCTCAAGGACAGTATGAGTATCTGAGGATGCCTTTTGGATCGAATAACGGTCAAGCAGTGTTCCAACGATTTATTTCGGACACGTTTTCAGACTTTATAATAAAGAAAAGAGCGTAGTAATTTATATGGACGAAATAGTTATAG
droTak1 scf7180000414304:40973-41149 + GAAGAAAAATCTGTGCCGTATACGGCGTTTGTTACCCATCAAGGACAGTATGAGTATCTGAGGATGCCTTTTGGATTGAAGAATGGTCCTGCAGTGT-TCAACGATTTATTTCGGAAACGTTTTCAGACTTTATAAGAAAGAA--GAGCCTAGTAATTTATATGGACGATATAGTTATAG
droEug1 scf7180000409171:33876-34053 + GAAGAAGAATCTGTAAAATATACCGCCTTTGTGACTCCGGACGGGCAGTTGGAATACTTGAGGATGCCTTTTGGACTTAAAAATGGACCCGCTGTTTTGCAAAGATTTATTTCCGACGTCTTGAGAGAGTTCGTAAGAAACCG--ACAGATCGTTGTTTATATGGATGATATTATTTTAG
dm3 chr3L:24207584-24207761 - AATAAGGAATCAATGAAATATACATCTTTTATGACGCCTTTAGGACAGTTTGAATTTTTAAGGATGCCAATGGGGCTGAAAAATGCACCGGCGGTCTTTCAGAGATTTATTAATAGAATTTTCGAGGATATGATAAGGCAGGA--TAAAGATATTATATATATGGATGACATTATGATAG
droSim2 3l:23147721-23147887 - G----------TATACTTTTTACCTCTTTCGTAACACCTCAAGAGCAACAAGAATATTTACGAATGCCATTTGGCTTAAA-AATAGATCAGACAATTTTCAACGAATTATTACAGAAGTATTAGTAGACTTTATTAAAAACAA--ACATATAGTAGTATATATCTATGATAAAGTGATAG
droSec2 scaffold_1653:825-1002 - AATAAGGAATCAATGAAATATACATCTTTTATGACGCCTTTAGGACAGTTTGAATTTTTAAGGATGCCAATGGGGTTGAAAAATGCACCGGCGGTCTTCCAGAGATTTATTAATAGAATTTTCGAGGATATGATTAGGCAGGA--TAAAGTTATTGTATATATGGATGACATTATGATAG
droYak3 3L:9934482-9934659 + GATTCACAGAGTGTACCGTTTACCTCATTTGTAACACCCCATGGGCAATATGAATATTTAAGAATGCCATTTGGCTTAAAAAATGGATCAGCTATTTTTCAAAGATTTATTACAGAAGTATTAGTGGACTTTATTCAAAACAA--GCAAATAGTAGTGTATATGGATGATATAGTGATAG
droEre2 scaffold_4760:59420-59596 + GATGAAAAATCCGTGCCGTATACAGCATTTATTACCTCTCAAGGACAATATGAGTATTTGAGGCTGCCTTTTGGATTAAA-AATGGCGCGGCAGTGTTTCAACGATTTATTTCAGAAACGTTTTCAGATTTTATAAGAAAGAA--GAACCTAGTAATTTATATGGACGATATAGTTATTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAAGAAAAATCAGTTCCGTATACATCGTTTGTGACACCGTAAGGACAGTATGAGTACTTGAGAATGCCCTTTGGGTTAAAAAATGGATCCGCTATTTTTCAAAGATTTATTTCGGAGCTCTTGAGAGACTTTATTAAGAACAA--AAGCATTGTAGTGTACATGGATGATATATTAGTAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................GAGTACTTGAGAATGCCCTTTGG..........................................................................................................23342.00126011220000660
..................................................TGAGTACTTGAGAATGCCCTTTGG..........................................................................................................24333.331000741010110130
.........................................................................................................................................................TAGTGTACATGGATGATATATTAG...24616.3398080000042480
.........................................................................................................................................................TAGTGTACATGGATGATATATTAGTAG27613.007800000008700
..................................................TGAGTACTTGAGAATGCCCTTTGGG.........................................................................................................25312.3337023000010310
...................................................GAGTACTTGAGAATGCCCTTTGGG.........................................................................................................2438.002401800201120
...................................................GAGTACTTGAGAATGCCCTTTG...........................................................................................................2236.331901800000100
...........................................................................................................TATTTCGGAGCTCTTGAGAGACTT.................................................2445.752309000003110
..................................................TGAGTACTTGAGAATGCCCTTTG...........................................................................................................2334.67140900000410
................................................TATGAGTACTTGAGAATGCCCTT.............................................................................................................2333.671101000000100
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGA........................................................2632.6780100000070
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTG.........................................................2632.3370000000070
...................................................GAGTACTTGAGAATGCCCTTTGGGT........................................................................................................2532.3370700000000
....................................................AGTACTTGAGAATGCCCTTTGG..........................................................................................................2232.3370700000000
..................................................TGAGTACTTGAGAATGCCCTTTGGGT........................................................................................................2632.0060500000010
...................................................GAGTACTTGAGAATGCCCTT.............................................................................................................2032.0060600000000
.........................................AGGACAGTATGAGTACTTGAGAATGC.................................................................................................................2631.6750000000050
................................................TATGAGTACTTGAGAATGCCCTTTGG..........................................................................................................2631.6750200000030
............................................ACAGTATGAGTACTTGAGAATGCCCTT.............................................................................................................2731.6750100001030
.............TTCCGTATACATCGTTTGTGACACCG.............................................................................................................................................2681.38110500001140
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTGA........................................................2731.3340100000120
...................................................GAGTACTTGAGAATGCCCTTT............................................................................................................2131.3340400000000
...........................................................................................................TATTTCGGAGCTCTTGAGAGACT..................................................2341.2550200001110
.........TCAGTTCCGTATACATCGTTTGTGACA................................................................................................................................................2781.1390000001080
.........TCAGTTCCGTATACATCGTTTGTGA..................................................................................................................................................2581.1390210000240
.................................................................................................TTCAAAGATTTATTTCGGAGCTCT...........................................................2431.0030100000020
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGAGA......................................................2831.0030000000030
............................TTGTGACACCGTAAGGACAGTATGAG..............................................................................................................................2611.0010000000010
.................................................ATGAGTACTTGAGAATGCCCTTTGG..........................................................................................................2531.0030200001000
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGC........................................................2631.0030100000020
....................................................AGTACTTGAGAATGCCCTTTG...........................................................................................................2131.0030300000000
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTG.........................................................2531.0030000000030
............................TTGTGACACCGTAAGGACAGT...................................................................................................................................2111.0010100000000
..........................................................................................................TTATTTCGGAGCTCTTGAGAGACT..................................................2441.0040200001010
..................TATACATCGTTTGTGACACCGTAAGGA.......................................................................................................................................2711.0010100000000
...................................................................................................CAAAGATTTATTTCGGAGCTCTT..........................................................2331.0030300000000
.............TTCCGTATACATCGTTTGTGACACC..............................................................................................................................................2581.0080500000030
...................................................................................................CAAAGATTTATTTCGGAGCTCTTG.........................................................2431.0030100000020
..............TCCGTATACATCGTTTGTGACACCGT............................................................................................................................................2611.0010100000000
..................................................................................................TCAAAGATTTATTTCGGAGCTCTTGAG.......................................................2731.0030100000020
.........TCAGTTCCGTATACATCGTTTGTGAC.................................................................................................................................................2680.7561210000110
...........................................................................................................TATTTCGGAGCTCTTGAGAG.....................................................2040.7530000003000
..........................................................................................................TTATTTCGGAGCTCTTGAGAGACTT.................................................2540.7530000000030
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTGT........................................................2730.6720000000020
...................................................................................................CAAAGATTTATTTCGGAGCTCT...........................................................2230.6720200000000
.................................................ATGAGTACTTGAGAATGCCCTT.............................................................................................................2230.6720200000000
.....................................................GTACTTGAGAATGCCCTTTGG..........................................................................................................2130.6720200000000
..................................................TGAGTACTTGAGAATGCCCTT.............................................................................................................2130.6720200000000
...................................................GAGTACTTGAGAATGCCC...............................................................................................................1830.6720000200000
.....................................................GTACTTGAGAATGCCCTTTGGG.........................................................................................................2230.6720100100000
.........................................................................................................................................................TAGTGTACATGGATGATATATTA....2360.6740000001030
................................................................................................TTTCAAAGATTTATTTCGGAGCTCT...........................................................2530.6720000000020
..........................................GGACAGTATGAGTACTTGAGAATGCCCT..............................................................................................................2830.6720100001000
.........TCAGTTCCGTATACATCGTTTGTGACACC..............................................................................................................................................2980.6350020000030
.........TCAGTTCCGTATACATCGTTTGTGACAC...............................................................................................................................................2880.6350200000030
.........TCAGTTCCGTATACATCGTTTGTG...................................................................................................................................................2480.6350200000030
...............................................................................................................................................................ACATGGATGATATATTAGTAG2160.5030000000300
...................................................................................TGGATCCGCTATTTTTCAAAGATT.........................................................................2420.5010100000000
.........................................................................................................TTTATTTCGGAGCTCTTGAGAGACTT.................................................2640.5020000000110
............................................................................................................................................CAA--AAGCATTGTAGTGTACATGGATG............2640.5020000000020
................................................TATGAGTACTTGAGAATGC.................................................................................................................1940.5020000000020
.........TCAGTTCCGTATACATCGTTTGTGAA.................................................................................................................................................2680.5040000000400
..............................................................................................................TTCGGAGCTCTTGAGAGACTTTAA..............................................2440.5020000000020
.......................................................................................................................................................TGTAGTGTACATGGATGATATATTAG...2650.4020100000010
.........TCAGTTCCGTATACATCGTTTGT....................................................................................................................................................2380.3830200000010
...............CCGTATACATCGTTTGTGACACCG.............................................................................................................................................2480.3830300000000
.............TTCCGTATACATCGTTTGTGAC.................................................................................................................................................2280.3830200000010
.........TCAGTTCCGTATACATCGTTTG.....................................................................................................................................................2280.3830100000200
............................................................................................TATTTTTCAAAGATTTATTTCGGAGC..............................................................2630.3310000000010
.................................................ATGAGTACTTGAGAATGCCCTTTG...........................................................................................................2430.3310100000000
...................................................GAGTACTTGAGAATGCCCTTTGGAA........................................................................................................2530.3310100000000
.................................................................................................TTCAAAGATTTATTTCGGAGCTCTTA.........................................................2630.3310000000010
..................................................TGAGTACTTGAGAATGCCCTTT............................................................................................................2230.3310100000000
........................................................CTTGAGAATGCCCTTTGGGTT.......................................................................................................2130.3310000010000
................................................TATGAGTACTTGAGAATGCCCTTTAA..........................................................................................................2630.3310000000010
.........................................................................................................................................GAACAA--AAGCATTGTAGTGTACATGGA..............2730.3310000001000
..................................................TGAGTACTTGAGAATGCCCTTTGGGTT.......................................................................................................2730.3310100000000
................................................TATGAGTACTTGAGAATGCCCTTTG...........................................................................................................2530.3310100000000
...................................................................................................CAAAGATTTATTTCGGAGCTCTTGA........................................................2530.3310100000000
........................................AAGGACAGTATGAGTACTTGAGAATGC.................................................................................................................2730.3310000000010
..................................................................................................TCAAAGATTTATTTCGGAGCTCT...........................................................2330.3310000000010
..........................................................................................................................................................AGTGTACATGGATGATATATTAGTAG2660.3320000000110
....................................................AGTACTTGAGAATGCCCTT.............................................................................................................1930.3310100000000
......................................................TACTTGAGAATGCCCTTTGGG.........................................................................................................2130.3310100000000
.......................................................ACTTGAGAATGCCCTTTGGGTTAAA....................................................................................................2530.3310100000000
...................................................GAGTACTTGAGAATGCCCT..............................................................................................................1930.3310100000000
....................................................................................................AAAGATTTATTTCGGAGCTCTT..........................................................2230.3310100000000
...................................................GAGTACTTGAGAATGCCCTTTGGGTT.......................................................................................................2630.3310100000000
...............................................................................................TTTTCAAAGATTTATTTCGGAGCTCT...........................................................2630.3310000000010
.................................................ATGAGTACTTGAGAATGCCCT..............................................................................................................2130.3310100000000
.............................................CAGTATGAGTACTTGAGAATGCCCTT.............................................................................................................2630.3310000000010
..............................................................................................................................................A--AAGCATTGTAGTGTACATGGATGATA.........2730.3310010000000
.........................................................................................................................................................TAGTGTACATGGATGATATATT.....2260.3320200000000
.....................................................GTACTTGAGAATGCCCTTTGGGT........................................................................................................2330.3310100000000
.................................................ATGAGTACTTGAGAATGCCCTTTGGG.........................................................................................................2630.3310000000100
.................................................................................................TTCAAAGATTTATTTCGGAGCTC............................................................2330.3310100000000
.....................................................GTACTTGAGAATGCCCTTTGGGTA.......................................................................................................2430.3310100000000
....................................................................................................AAAGATTTATTTCGGAGCTCTTGAG.......................................................2530.3310000000010
...................................................GAGTACTTGAGAATGCCCTTTGGA.........................................................................................................2430.3310010000000
.........................................................................................................................................................TAGTGTACATGGATGATATAT......2160.3320000001100
..........................................GGACAGTATGAGTACTTGAGAATGCCC...............................................................................................................2730.3310100000000
................................................................................................TTTCAAAGATTTATTTCGGAG...............................................................2130.3310100000000
.............TTCCGTATACATCGTTTGTGACA................................................................................................................................................2380.2520000000110
..........CAGTTCCGTATACATCGTTTGTGACAC...............................................................................................................................................2780.2520100000010
..........................................GGACAGTATGAGTACTTGAGAATGC.................................................................................................................2540.2510000000010
..........................................................................................................TTATTTCGGAGCTCTTGAGAG.....................................................2140.2510000000010
...........................................................................................................TATTTCGGAGCTCTTGAGAGAC...................................................2240.2510100000000
..............TCCGTATACATCGTTTGTGACACC..............................................................................................................................................2480.2520200000000
...........................................GACAGTATGAGTACTTGAG......................................................................................................................1940.2510100000000
..........CAGTTCCGTATACATCGTTTGTGAC.................................................................................................................................................2580.2520100000100
..........CAGTTCCGTATACATCGTTTGTGA..................................................................................................................................................2480.2520100000010
...........................................................................................................TATTTCGGAGCTCTTGAGAGA....................................................2140.2510100000000
..............................................................................................................TTCGGAGCTCTTGAGAGACTTT................................................2240.2510100000000
..........................................................................................................TTATTTCGGAGCTCTTGAGAGAC...................................................2340.2510100000000
.............................................................................................................TTTCGGAGCTCTTGAGAGACTTTAT..............................................2540.2510000000010
...........................................................GAGAATGCCCTTTGGGTTAAAA...................................................................................................2250.2010100000000
.......................................................................................................................................................TGTAGTGTACATGGATGATATAT......2350.2010000001000
............................................................................TAAAAAATGGATCCGCTA......................................................................................1850.2010100000000
........................................................................................................................................................GTAGTGTACATGGATGATATATTAG...2550.2010000000010
.......................................................................................................................................................TGTAGTGTACATGGATGATATA.......2250.2010100000000
..........................................................................................................TTATTTCGGAGCTCTTGAG.......................................................1960.1710000000010
...........................................................................................................................................................GTGTACATGGATGATATATTAGTA.2460.1710100000000
.........................................................................................................TTTATTTCGGAGCTCTTGAGA......................................................2160.1710100000000
..........................................................................................................................................................AGTGTACATGGATGATATATTAGT..2460.1710100000000
.........................................................................................................................................................TAGTGTACATGGATGATATTAG.....2260.1710000000100
.........................................................................................................................................................TAGTGTACATGGATGATATATTAGA..2560.1710000000010
......................................................................................................................................................TTGTAGTGTACATGGATG............1860.1710100000000
............GTTCCGTATACATCGTTTGTGA..................................................................................................................................................2280.1310100000000
........ATCAGTTCCGTATACATCGTT.......................................................................................................................................................2180.1310100000000
..............TCCGTATACATCGTTTGTGAC.................................................................................................................................................2180.1310100000000
............GTTCCGTATACATCGTTTGTGACACC..............................................................................................................................................2680.1310100000000
............GTTCCGTATACATCGTTTGTGAC.................................................................................................................................................2380.1311000000000
...............CCGTATACATCGTTTGTGACACC..............................................................................................................................................2380.1310100000000
................CGTATACATCGTTTGTGACACCG.............................................................................................................................................2380.1310100000000
.........TCAGTTCCGTATACATCGTT.......................................................................................................................................................2080.1310100000000
..............TCCGTATACATCGTTTGTGACACCG.............................................................................................................................................2580.1310000000010
.........TCAGTTCCGTATACATCGTTTGA....................................................................................................................................................2380.1310100000000
.....AAAATCAGTTCCGTATACATCGT........................................................................................................................................................2380.1310000001000
.......AATCAGTTCCGTATACATCGTTTG.....................................................................................................................................................2480.1310000000010
............GTTCCGTATACATCGTTTGTGACA................................................................................................................................................2480.1310100000000
droPer2
GAAGAAAAATCAGTTCCGTATACATCGTTTGTGACACCGCAAGGACAGTATGAGTACTTGAGAATGCCCTTTGGGTTAAAAAATGGATCCGCTATTTTTCAAAGATTTATTTCGGAGCTCTTGAGAGACTTTATTAGGAACAA--AAGCATTGTAGTGTACATGGATGATATATTAGTAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................GAGTACTTGAGAATGCCCTTTGG..........................................................................................................23170.478080000
...................................................GAGTACTTGAGAATGCCCTTTG...........................................................................................................22170.244040000
.................GTATACATCGTTTGTGACACC..............................................................................................................................................21200.102200000
...................................................................................................CAAAGATTTATTTCGGAGCTCTTG.........................................................24140.071010000
...................................................GAGTACTTGAGAATGCCCTTTGGGT........................................................................................................25160.061010000
..................................................................................................TCAAAGATTTATTTCGGAG...............................................................19160.061000001
.................................................ATGAGTACTTGAGAATGCCCT..............................................................................................................21160.061010000
....................................................AGTACTTGAGAATGCCCTTTGG..........................................................................................................22170.061010000
.....AAAATCAGTTCCGTATACATCG.........................................................................................................................................................22170.061010000
..................................................TGAGTACTTGAGAATGCCCTTTG...........................................................................................................23170.061010000
......................................................TACTTGAGAATGCCCTTTGG..........................................................................................................20170.061010000
............................................................................TAAAAAATGGATCCGCTATT....................................................................................20170.061010000
...................................................GAGTACTTGAGAATGCCCTTTC...........................................................................................................22170.061010000
...........................................................................................................................................ACAA--AAGCATTGTAGTGTACATGGAT.............26200.051100000
........................................................................................................................................................GTAGTGTACATGGATGATATATTA....24200.051010000
........................................................................................................................................................GTAGTGTACATGGATGATATATTAGT..26200.051010000
..................................................................................................................................................AGCATTGTAGTGTACATGGATGA...........23200.051010000
........................................................................................................................................................GTAGTGTACATGGATGATATATT.....23200.051000001
...................ATACATCGTTTGTGACACC..............................................................................................................................................19200.051100000
droWil2
GACGAAGAGTCAGTCAAATACACATCCTTTATTACACCACTTGGACAATATGAGTTTTTAAGAATGCCAATGGGGATAAAAAACGCATCACATGTATTTCAAAGATTTATTAACCGAATTTTTGAAGATATGATTCGAAGAGG--AGAAGTCCTCGTCTACATGGACGACATCATGATAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................AGATTTATTAACCGAATTTTTGAAGA....................................................26120.42505000
.............................TATTACACCACTTGGACAATATGAGT.............................................................................................................................2690.33301020
........................................TTGGACAATATGAGTTTTTAAGAATGCC................................................................................................................28100.30321000
.......................................................................GGGGATAAAAAACGCATCACATG......................................................................................23100.30301020
..........................CTTTATTACACCACTTGGACAATA..................................................................................................................................2480.25202000
................................................................TGCCAATGGGGATAAAAAACGCATCACA........................................................................................2890.22200020
..................................................TGAGTTTTTAAGAATGCCAATGGGGA........................................................................................................26100.20200020
...........................................GACAATATGAGTTTTTAAGAATGCCAA..............................................................................................................27100.20201010
........................................................................GGGATAAAAAACGCATCACATGTAT...................................................................................25100.20202000
....................................................................................................................................ATTCGAAGAGG--AGAAGTC............................1850.20101000
........................................TTGGACAATATGAGTTTTTAAGAA....................................................................................................................24110.18200020
...........................TTTATTACACCACTTGGACAATATG................................................................................................................................2590.11101000
......................................................................................................................................................TCCTCGTCTACATGGACGACATCATGA...2790.11101000
.............................TATTACACCACTTGGACAATATGAG..............................................................................................................................2590.11100010
................................TACACCACTTGGACAATATGAGTTTT..........................................................................................................................2690.11100010
............................................................AGAATGCCAATGGGGATAAAAAACGC..............................................................................................26100.10101000
.......................................................................................TCACATGTATTTCAAAGATTTAT......................................................................23100.10100010
.....................................................GTTTTTAAGAATGCCAATGGGG.........................................................................................................22100.10101000
......................................................TTTTTAAGAATGCCAATGGGGAT.......................................................................................................23100.10101000
..................................................................CCAATGGGGATAAAAAACGCATCACA........................................................................................26100.10101000
......................................................................TGGGGATAAAAAACGCATCACATG......................................................................................24100.10101000
......................................................................TGGGGATAAAAAACGCATCACATGTATT..................................................................................28100.10101000
.......................................................................GGGGATAAAAAACGCATCACATGTATTT.................................................................................28100.10101000
....................................................................AATGGGGATAAAAAACGCATCACATG......................................................................................26100.10101000
.............................................................GAATGCCAATGGGGATAAAA...................................................................................................20100.10100100
..................................................TGAGTTTTTAAGAATGCCAATGG...........................................................................................................23100.10100010
.............................................................GAATGCCAATGGGGATAAAAAACGCA.............................................................................................26100.10100010
..................................................................CCAATGGGGATAAAAAACGCATCACATG......................................................................................28100.10101000
.......................................................................GGGGATAAAAAACGCATCACATGTA....................................................................................25100.10101000
................................................TATGAGTTTTTAAGAATGCCAATGGG..........................................................................................................26100.10100010
...................................................GAGTTTTTAAGAATGCCAATGGGG.........................................................................................................24100.10100010
.........................................TGGACAATATGAGTTTTTAAGAATGC.................................................................................................................26100.10100010
........................................................................GGGATAAAAAACGCATCACATGT.....................................................................................23100.10101000
..........................................................TAAGAATGCCAATGGGGATAAAAAAC................................................................................................26100.10100010
........................................TTGGACAATATGAGTTTTTAAGAATG..................................................................................................................26100.10100010
......................................ACTTGGACAATATGAGTTTTTAAGA.....................................................................................................................25110.09101000
....................................................................AATGGGGATAAAAAACGCATCA..........................................................................................22110.09101000
.....................................CACTTGGACAATATGAGTTTTTAAGAA....................................................................................................................27110.09101000
.................................................................................................TTCAAAGATTTATTAACCGAATTTT..........................................................25110.09101000
...................................ACCACTTGGACAATATGAGTTTT..........................................................................................................................23110.09101000
...........................................................................................................TATTAACCGAATTTTTGAAGATATGAT..............................................27120.08100010
droVir3
GAGGAAAAATTAATCCCGTACACTGCGTTCGTAACCCCTCATGGACAGTACGAGTATTTAAGAATACCTTTCGGGCTTAAAAATGGATCAGCCATATTTCAGAGATTTATTTCTG-----CTTAGTGACCTTATTAGAAATAA--GAGCATCGTAGTTTATATGGAAGATATAATGGTAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................TTAAAAATGGATCAGCCATATTTCAGA.............................................................................2721.002000000000000000000000000000020000000000000000000000000000000000
...................ACACTGCGTTCGTAACCCCTCATC.........................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
............................................................................TTAAAAATGGATCAGCCATATTTCAG..............................................................................2620.501000000000000000000000000001000000000000000000000000000000000000
.............................................................................TAAAAATGGATCAGCCATATTTCAG..............................................................................2520.501000000000000000000000000000001000000000000000000000000000000000
..............................................AGTACGAGTATTTAAGAAT...................................................................................................................1930.331000000000000000000000000000000100000000000000000000000000000000
droMoj3
GAGAAAGAGTCCGTAAAATACACATCGTTTGTTACGCCGTTAGGACAGTTTGAGTTCTTGAGAATGCCTATGGGATTAAAAACTGCTCCGCAAATTTTTCAAAGGTTCATTAATGATATATTTGCAGATTTAATAAAGGAAAG--CAAGGTAATCGTATATATGGATGATATAATGATTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................GAGTTCTTGAGAATGCCTATGGG..........................................................................................................23201.55313000010
...................................................GAGTTCTTGAGAATGCCTATGGGA.........................................................................................................24200.70141200002
...................................................GAGTTCTTGAGAATGCCTATGGGATT.......................................................................................................26200.153300000
...........................................GACAGTTTGAGTTCTTGAGAATGCCT...............................................................................................................26200.153100020
...........................................GACAGTTTGAGTTCTTGAGAATGCC................................................................................................................25200.102000020
.......AGTCCGTAAAATACACATCGTTTGT....................................................................................................................................................25110.091100000
......................................................TTCTTGAGAATGCCTATGGGATTAAAAAA.................................................................................................29200.051100000
....................................................AGTTCTTGAGAATGCCTATGGGATT.......................................................................................................25200.051100000
..........................GTTTGTTACGCCGTTAGGC.......................................................................................................................................19200.051000001
................................TACGCCGTTAGGACAGTTTGAGTTC...........................................................................................................................25200.051000001
....................................................AGTTCTTGAGAATGCCTATGGG..........................................................................................................22200.051100000
............................TTGTTACGCCGTTAGGACAGTTTGAGC.............................................................................................................................27200.051000001
.................................................TTGAGTTCTTGAGAATGCCTATGGG..........................................................................................................25200.051100000
...................................................GAGTTCTTGAGAATGCCTATGGGAT........................................................................................................25200.051000010
droGri2
GACGAAAAATCAATAGCAAAAACAGCATTCTCAACCAAAGCAGGACATTTCGAATATACGCGAATGCCATTTGGCTTGAAAAATGCACCAGCAACTTTTCAGCGTTGTATGAACAATCTTTTAAGAGACTTAATTTACAAAAA-----TTGTCTAGTTTACATGGATGACATAATAGTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GATGAAGAATCTATTCGAAAGACAGCTTTTTCTACAAAGCATGGTCATTTTGAGTACACCCGAATGCCATTTGGTTTAAAAAATGCACCCGCTACTTTTCAGCGATGTATGAATAACGTCTTGGGGGAACTTGTGTATAGGAA-----TTGCTTGGTTTATTTGGACGATATAATAG-TGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................GTATGAATAACGTCTTGGGGGAAC..................................................2450.402200000
......................................................................................................................TCTTGGGGGAACTTGTGTATAGG.......................................2350.201100000
................................TACAAAGCATGGTCATTTTGAGTACACC........................................................................................................................2850.201010000
.........................................................................................................TGTATGAATAACGTCTTGGGGGAACTTG...............................................2850.201100000
droBip1
GAGAACGAATCAATTAAATATACTTCATTTATGACGCCGTTAGGACAGTTCGAATTTATGCGGATGCCAATGGGCCTAAAAAACGCACCGGCGGTGTTTCAAAGATTTATCAATAAGATTTTTGCAGACATGATAAGAGAAGGA-AAAAGTGGTTATATACATGGACGATATTATGATCGSizeHit CountTotal NormTotal
No Reads
droKik1
GAAGAAGAGTCTGTAAAATATACCGCCTTTGTGACTCCGGACGGGCAGTTCGAATACTTGAGGATGCCTTTTGGGCTTAAAAATGGTCCCGCTGTTTTCCAAAGATTTATTTCCGACGCCTTGAGAGACTTTGTAAGAAACCG--ACAGATCGTTGTTTATATGGATGATATTATTCTAGSizeHit CountTotal NormTotal
No Reads
droFic1
GAAGAAAAATCTGTGCCGTATACGGCATTTGTTACTCCTCAAGGACAGTATGAGTATTTAAGGATGCCTTTTGGATTGAAGAATGGTCCTGCAGTGTTTCAACGATTTATTTCGGAAACGTTTTCAGACTTTATAAGAAAGAA--GAGCCTTGTAATTTATATGGATGATATAGTTATAGSizeHit CountTotal NormTotal
No Reads
droEle1
GAAGAAGAATCCGTGAAATATACTGCCTTTGTGACTCCGGACCGGCAGTTTGAGTATTTAAATATGCCTTTCGGGCTCAATAGTGGACCGGCTATATTCCACAGGTTTATATCTGACGTATTAAGCGATCTTGTTAGAAATCG--ACAAATTGTTGTGTATATGGATGATATAATTCTGGSizeHit CountTotal NormTotal
No Reads
droRho1
GAAGAGAAATCTGTACCGTATACATCTTTCGTTACCCCTCAAGGACAATATGAGTACCTGAGAATGCCTTTTGAATTAAAGAATGGCCCTGCAGTGTTTCAAAGATTTATCTCAGAAACGTTTTCAGATTTTATAAGAAAAAAG-AGTGGATGATATAGTTATGGATAATATAGTTATTGSizeHit CountTotal NormTotal
No Reads
droBia1
GAAGAAAAATCTGTGCCCTTTACGGCATTTGTTACCCCTCAAGGACAGTATGAGTATCTGAGGATGCCTTTTGGATCGAATAACGGTCAAGCAGTGTTCCAACGATTTATTTCGGACACGTTTTCAGACTTTATAATAAAGAAAAGAGCGTAGTAATTTATATGGACGAAATAGTTATAGSizeHit CountTotal NormTotal
No Reads
droTak1
GAAGAAAAATCTGTGCCGTATACGGCGTTTGTTACCCATCAAGGACAGTATGAGTATCTGAGGATGCCTTTTGGATTGAAGAATGGTCCTGCAGTGT-TCAACGATTTATTTCGGAAACGTTTTCAGACTTTATAAGAAAGAA--GAGCCTAGTAATTTATATGGACGATATAGTTATAGSizeHit CountTotal NormTotal
No Reads
droEug1
GAAGAAGAATCTGTAAAATATACCGCCTTTGTGACTCCGGACGGGCAGTTGGAATACTTGAGGATGCCTTTTGGACTTAAAAATGGACCCGCTGTTTTGCAAAGATTTATTTCCGACGTCTTGAGAGAGTTCGTAAGAAACCG--ACAGATCGTTGTTTATATGGATGATATTATTTTAGSizeHit CountTotal NormTotal
No Reads
dm3
AATAAGGAATCAATGAAATATACATCTTTTATGACGCCTTTAGGACAGTTTGAATTTTTAAGGATGCCAATGGGGCTGAAAAATGCACCGGCGGTCTTTCAGAGATTTATTAATAGAATTTTCGAGGATATGATAAGGCAGGA--TAAAGATATTATATATATGGATGACATTATGATAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................TAATAGAATTTTCGAGGATATGAT..............................................242016.5533100000000000000000000000100000100000001000010000020000000010000000000000000000000001000000000000000000000000000000002000000000000000000300000000000320000123000000000000000000001000000000000000120001000000002000000000030001250000111000000000010000000000000000000000000000000000000000000000000010000000000001003700000000000000000000000003
..............................................................................................................TAATAGAATTTTCGAGGATATGA...............................................232014.302860000000000010000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000060000000000000000000000000000000000000000010000000000000160000020000004400000000030002360882303363000000000000000000000000000000000000000000000000000000000000000004010000000000000000000000000600000000
..............................................................................................................TAATAGAATTTTCGAGGATATGATAAG...........................................272011.5523100000000000000000000000000000000000000400000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000003406600700000000000000000000000000000000000200000005000000031000000000100000360000850000000000000000000000000000000000000000000000000000000000000000000021000000070000000000000000910000000
...AAGGAATCAATGAAATATACATCTTT.......................................................................................................................................................262010.6021200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000922100460520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAATAGAATTTTCGAGGATATGATA.............................................252010.1520300000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001003000000000321600000000000000000000010000000000000001000000000003200000000000000005800740000000000000000000000000000000000000000000000000000000000001000000002000000000000000000000000050000000
......................................................TTTTTAAGGATGCCAATGGGG.........................................................................................................21209.451890000000000000000000000000000000000000015000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000001101400430800440000000000000000000000000000000000000000000000000010000000000000500000280350000000000000000000000000000000000000000000000000000000000000000000020000000500000000000100010000000000
..............................................................................................................TAATAGAATTTTCGAGGATATGATAAGG..........................................28208.8517700000000000000000000000000000000000000000000000040002000000000000000000000000000002000000000000000000000000000000000000000000000000000000029000000000000100000000000000000000000000000000000000200000200000000003000000010277360000000000000000000000000000000000000000000000000000000000000000000000020500000001200000000000000000330000000
......................................................TTTTTAAGGATGCCAATGGGGC........................................................................................................22205.451090000000000000000000000000000000000000050300040105000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000110000030000000000000000000000000000000003000000000000000000000000000017004500000000000002000000000000000000000000000000000000000000000000001000000100000000200000000000000000002000000
......................................................TTTTTAAGGATGCCAATGGG..........................................................................................................20205.40108000000000000000000000002100000000000017000000000030000000000000000000000000000000000140001000010000000000000000100000000000000000000000000000050000002000010000000000000000000000000000000000000000000000000300000000000000028000270000000000001000000001000000000000000000000000000010000000000000012003000000030000000000000000530000000
.............................................CAGTTTGAATTTTTAAGGATGCCAA..............................................................................................................25204.85970000000000000000000000020000000000000000041000220013000000000000000000000000000000000000000000010000000000000000000000000000000000000000000002000011000200009000000000000000000000000000000000310000009000000000000000000032011030000000000000000000000000000000000000000000000000000000000000000000002300010000010000000000000000000000000
...AAGGAATCAATGAAATATACATCT.........................................................................................................................................................24202.7555000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000100000000000000000000000028000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TTTTTAAGGATGCCAATGGGGCT.......................................................................................................23202.655300000000000000000000000000000000000011100000020000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000100000000000210000600050000042000000000000000000000000000000000000000000000000000000000000000001007000000000000000000000000600100000
..................TATACATCTTTTATGACGCCTTTAGGA.......................................................................................................................................27202.1543000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000100000000000000000000001505014050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TTTTTAAGGATGCCAATGGGGCTGA.....................................................................................................25202.1042000000000000000000000010000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010010000000000000000000000000100000000000000200000000100000000060012020100110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAATAGAATTTTCGAGGATATGATAA............................................26202.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000014000000007000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000031000000
......................................................TTTTTAAGGATGCCAATGG...........................................................................................................19201.90380000000000000000000000000000000000000000020030100310300000000000000000000000000000000020000000001000000000000000100000000000000000000000000030000000010000000000000000000000000000000000000030000000000000000000000000000000902000000000000000000000000000000000000000000000000000010000000002000000000000000000000000000000000000000000
.......................................................TTTTAAGGATGCCAATGGGGC........................................................................................................21201.85370000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000001000000000000000000000000000000000000050020000000000000000000111443010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000002003000000
........................................TAGGACAGTTTGAATTTTTAAGGAT...................................................................................................................25201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002700000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TGGGGCTGAAAAATGCACCGGCGGTC....................................................................................26201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000400000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000017
.......................................................TTTTAAGGATGCCAATGGG..........................................................................................................19201.20240000000000000000000000000000000000000000001000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000000000000000000000000010000000000020000000000000000000000000000000400900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGGAATCAATGAAATATACATCTTTT......................................................................................................................................................27201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................TAATAGAATTTTCGAGGATATGATATC...........................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TTTTTAAGGATGCCAATGGGGCTGG.....................................................................................................25200.1020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTAGGACAGTTTGAATTTTTAAGGAT...................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TATACATCTTTTATGACGCCTTTAGG........................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ATATGGATGACATTATGATAG21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................CTTTTATGACGCCTTTAGGACAGTTT.................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AATAGAATTTTCGAGGATATGATAAG...........................................26200.1020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AATGCACCGGCGGTCTTTCAGAGATT.........................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................TCTTTTATGACGCCTTTAGGA.......................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TTAATAGAATTTTCGAGGATATGATA.............................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TTTTTAAGGATGCCAATGGGGCTT......................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GACGCCTTTAGGACAGTTTGAATTTTT.........................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TCGAGGATATGATAAGGCAGGA--TAA................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTTAAGGATGCCAATGGGGCTGAA....................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................CGAGGATATGATAAGGCAGGA--TAA................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTAGGACAGTTTGAATTTTTAAGGATG..................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTTATGACGCCTTTAGGACAGA...................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATCTTTTATGACGCCTTTAGGACAGT...................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGAATTTTCGAGGATATGATAAGGG.........................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAAAAATGCACCGGCGGTCTTTCAG..............................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TATTAATAGAATTTTCGAGGATATGAT..............................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTTTCGAGGATATGATAAGGCAGGA--T..................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATGGGGCTGAAAAATT...............................................................................................16200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TGGGGCTGAAAAATGCACCGGCGGTA....................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAAATATACATCTTTTATGACGCC..............................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G----------TATACTTTTTACCTCTTTCGTAACACCTCAAGAGCAACAAGAATATTTACGAATGCCATTTGGCTTAAA-AATAGATCAGACAATTTTCAACGAATTATTACAGAAGTATTAGTAGACTTTATTAAAAACAA--ACATATAGTAGTATATATCTATGATAAAGTGATAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................CATTTGGCTTAAA-AATAGATC...........................................................................................2111.00100000000001000000
...................................................................CATTTGGCTTAAA-AATAGA.............................................................................................1911.00100000010000000000
.....................................................................................................................................................ATAGTAGTATATATCTATGATAAAGTGA...2811.00100000001000000000
........................................................................................................AATTATTACAGAAGTATTAGT.......................................................2111.00100000000001000000
...................................................................CATTTGGCTTAAA-AAT................................................................................................1650.20100000001000000000
...................................................................CATTTGGCTTAAA-AA.................................................................................................15100.10100000010000000000
droSec2
AATAAGGAATCAATGAAATATACATCTTTTATGACGCCTTTAGGACAGTTTGAATTTTTAAGGATGCCAATGGGGTTGAAAAATGCACCGGCGGTCTTCCAGAGATTTATTAATAGAATTTTCGAGGATATGATTAGGCAGGA--TAAAGTTATTGTATATATGGATGACATTATGATAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................TTTAGGACAGTTTGAATTTTTAAGG.....................................................................................................................25203.006000519
.......................................TTAGGACAGTTTGAATTTTTAAGGA....................................................................................................................25200.4597020
.................................................................................................................TAGAATTTTCGAGGATATGATTAGGC.........................................26200.2044000
...........................................GACAGTTTGAATTTTTAAGGATGCCA...............................................................................................................26200.2040040
..............................................................................................................TAATAGAATTTTCGAGGATATGATTAGGC.........................................29200.2041300
...................................................................................TGCACCGGCGGTCTTCCAGAGATTTA.......................................................................26180.1122000
.....................................................................................................................................TTAGGCAGGA--TAAAGTTATTGTATATA..................27190.1122000
......................................................................................................................................TAGGCAGGA--TAAAGTTATTGTATAT...................25190.1121001
......................................................................................................................................TAGGCAGGA--TAAAGTTATTGTATATAT.................27190.1122000
................................................................................................TTCCAGAGATTTATTAATAGAATTTT..........................................................26200.1022000
........................TCTTTTATGACGCCTTTAGGACAGTT..................................................................................................................................26200.1022000
.........TCAATGAAATATACATCTTTTATGACGCC..............................................................................................................................................29200.1022000
................................................................................................................ATAGAATTTTCGAGGATATGATTAGGC.........................................27200.1021010
..............................................................................................................TAATAGAATTTTCGAGGATATGATTAGG..........................................28200.1022000
.....................................................................................................................................TTAGGCAGGA--TAAAGTTATTGTATAT...................26190.0511000
...............................TGACGCCTTTAGGACAGTTTGAATT............................................................................................................................25200.0510010
.................................................................................................................................................TAAAGTTATTGTATATATGGATGACATT.......28200.0511000
..................................................TGAATTTTTAAGGATGCCAATGG...........................................................................................................23200.0510001
................................................................................................................ATAGAATTTTCGAGGATATGATTAGGCA........................................28200.0511000
..............................ATGACGCCTTTAGGACAGTTT.................................................................................................................................21200.0511000
.............................TATGACGCCTTTAGGACAGTTT.................................................................................................................................22200.0511000
................................................................................................................ATAGAATTTTCGAGGATATGATTAGG..........................................26200.0511000
....................TACATCTTTTATGACGCCTTTAGGACAG....................................................................................................................................28200.0511000
.......AATCAATGAAATATACATCTTTTATGAC.................................................................................................................................................28200.0511000
................................................................................................................................TATGATTAGGCAGGA--TAAAGTTATTGTA......................28200.0511000
.................................................................................................................TAGAATTTTCGAGGATATGATTAGGCA........................................27200.0511000
......................................................................................................................TTTTCGAGGATATGATTAGGCAGGA--...................................25200.0511000
................................................................................................................................TATGATTAGGCAGGA--TAAAGTTAT..........................24200.0510001
..................................................................................................................................TGATTAGGCAGGA--TAAAGTTATTGTA......................26200.0511000
.............................................................................................................TTAATAGAATTTTCGAGGATATGATT.............................................26200.0510010
......................................TTTAGGACAGTTTGAATTTTTAAGGAA...................................................................................................................27200.0510010
........................................................................................................................TTCGAGGATATGATTAGGCAGGA--TA.................................25200.0511000
....................................................................................................................AATTTTCGAGGATATGATTAGGCAGGA--T..................................28200.0510100
..................................CGCCTTTAGGACAGTTTGAATTTTTA........................................................................................................................26200.0511000
.......................................................................................................................................AGGCAGGA--TAAAGTTATTGTATATA..................25200.0511000
........................................................................................................................TTCGAGGATATGATTAGGCAGGA--...................................23200.0511000
.................................................................................................TCCAGAGATTTATTAATAGAATTT...........................................................24200.0511000
..........................TTTTATGACGCCTTTAGGACAGTTTGA...............................................................................................................................27200.0511000
...............................................................................................................................ATATGATTAGGCAGGA--TAAAGTTATT.........................26200.0510100
..................................................................................................................AGAATTTTCGAGGATATGATTAGGCA........................................26200.0511000
..........................................................................................................................CGAGGATATGATTAGGCAGGA--TAAAGT.............................27200.0510001
.................................................................................................TCCAGAGATTTATTAATAGAATT............................................................23200.0510100
.......................................TTAGGACAGTTTGAATTTTTAAG......................................................................................................................23200.0511000
.............TGAAATATACATCTTTTATGACT................................................................................................................................................23200.0511000
..................................................TGAATTTTTAAGGATGCCAATGGGG.........................................................................................................25200.0511000
..............................................................................................................................GATATGATTAGGCAGGA--TAAAGTT............................24200.0511000
.......................................................................................................................TTTCGAGGATATGATTAGGCAGGA--TA.................................26200.0511000
.................................................................................................................TAGAATTTTCGAGGATATGATTAGG..........................................25200.0510010
...........................................GACAGTTTGAATTTTTAAGGATG..................................................................................................................23200.0511000
......................................................................................................................TTTTCGAGGATATGATTAGGCAGGA--TA.................................27200.0511000
droYak3
GATTCACAGAGTGTACCGTTTACCTCATTTGTAACACCCCATGGGCAATATGAATATTTAAGAATGCCATTTGGCTTAAAAAATGGATCAGCTATTTTTCAAAGATTTATTACAGAAGTATTAGTGGACTTTATTCAAAACAA--GCAAATAGTAGTGTATATGGATGATATAGTGATAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................ATTTATTACAGAAGTATTAGTGGAC...................................................25118.0018010000000017
.........................................................................................................TTTATTACAGAAGTATTAGT.......................................................20117.0017000000170000
........................................................................................................ATTTATTACAGAAGTATTAGTGGACT..................................................26114.001417200040000
........................................................................................................ATTTATTACAGAAGTATTAGTGGACTT.................................................2719.00906200000001
............................................................................................................ATTACAGAAGTATTAGTGGACT..................................................2217.00700000070000
.......................................................................................................GATTTATTACAGAAGTATTAGT.......................................................2216.00600000060000
...............................................................................................................ACAGAAGTATTAGTGGACT..................................................1916.00600000060000
..........................................................................................................................................................AGTGTATATGGATGATATAGT.....2116.00600000060000
....................................................................................................................................ATTCAAAACAA--GCAAATAGTAGTGT.....................2515.00500000050000
......................................................................................................AGATTTATTACAGAAGTATTAGT.......................................................2315.00502000030000
...................................................................................................CAAAGATTTATTACAGAAGTATTAGT.......................................................2615.00501000040000
.....................................................................................................................................................ATAGTAGTGTATATGGATG............1915.00502000030000
.............................................................................................................................................................GTATATGGATGATATAGTGATA.2215.00500000050000
.............................................................................................................................................AA--GCAAATAGTAGTGTATATGGAT.............2415.00500000050000
.................................................................................AATGGATCAGCTATTTTTCAAAGAT..........................................................................2515.00510000040000
..........................................................................................................................................AACAA--GCAAATAGTAGTGTATATG................2415.00500000050000
.ATTCACAGAGTGTACCGTTT...............................................................................................................................................................2015.00502000120000
................................................................................................TTTCAAAGATTTATTACAGAAGTATTAGT.......................................................2914.00400000040000
...................................................................................................CAAAGATTTATTACAGAAGT.............................................................2014.00400000040000
...........................................................................................................................................................GTGTATATGGATGATATAGT.....2014.00402000020000
.........................................................................................................TTTATTACAGAAGTATTAGTGGAC...................................................2414.00402000020000
...TCACAGAGTGTACCGTTTAC.............................................................................................................................................................2014.00400000040000
........................................................................................................................................AAAACAA--GCAAATAGTAGTGT.....................2114.00400000130000
........................................................................................................ATTTATTACAGAAGTATTAGT.......................................................2114.00400000040000
..............................................................................................................TACAGAAGTATTAGTGGACT..................................................2014.00400000040000
............................................................................................................ATTACAGAAGTATTAGTGGAC...................................................2114.00411000020000
.............................................................................................ATTTTTCAAAGATTTATTACAGAAGT.............................................................2614.00401000030000
............................................................................................................................................CAA--GCAAATAGTAGTGTATATGGATG............2614.00401000030000
............................................................................................................................................CAA--GCAAATAGTAGTGTATATGGAT.............2514.00402000020000
............................................................................................................................................CAA--GCAAATAGTAGTGTATATGGA..............2414.00401100020000
..............................GTAACACCCCATGGGCAATATGA...............................................................................................................................2313.00303000000000
........................TCATTTGTAACACCCCATGGGC......................................................................................................................................2213.00302100000000
.....................................................................................................AAGATTTATTACAGAAGTATTAGT.......................................................2413.00300000030000
.......................................................................................................GATTTATTACAGAAGTATTAGTGGAC...................................................2613.00300000030000
..........................................................................................................TTATTACAGAAGTATTAGT.......................................................1913.00300000030000
............................................................................................................................................CAA--GCAAATAGTAGTGTATATG................2213.00300000030000
........................................................................................................................................................GTAGTGTATATGGATGATATAGTGAT..2613.00301000020000
.......................................................................................................................................................AGTAGTGTATATGGATGATATAGTG....2513.00300000120000
....CACAGAGTGTACCGTTTACCTC..........................................................................................................................................................2213.00300000030000
.................................................................................AATGGATCAGCTATTTTTCAAAGA...........................................................................2413.00301000020000
.......................................................................................................................ATTAGTGGACTTTATTCAAAACAA--...................................2413.00302000010000
..................................................................................................TCAAAGATTTATTACAGAAGT.............................................................2113.00300000030000
....................................................................................................AAAGATTTATTACAGAAGTATTAGT.......................................................2513.00300000030000
GATTCACAGAGTGTACCGTTT...............................................................................................................................................................2113.00300000030000
....................................................................................................................................................AATAGTAGTGTATATGGATG............2013.00300000030000
..................................................................................ATGGATCAGCTATTTTTCAAAGAT..........................................................................2413.00301000020000
........................................................................................................................................................GTAGTGTATATGGATGATATAGT.....2313.00301000020000
.........................................................................................................TTTATTACAGAAGTATTAGTGGA....................................................2313.00300000030000
.............................................................................................................TTACAGAAGTATTAGTGGAC...................................................2013.00312000000000
.......................................................................................................GATTTATTACAGAAGTATTAGTGGA....................................................2513.00302000100000
........................................................................................................ATTTATTACAGAAGTATTAGTGGA....................................................2413.00302000010000
.ATTCACAGAGTGTACCGTTTA..............................................................................................................................................................2113.00301000020000
.ATTCACAGAGTGTACCGTT................................................................................................................................................................1913.00300000030000
.........................................................................................................................................AAACAA--GCAAATAGTAGTGTATATGGATG............2913.00320000010000
GATTCACAGAGTGTACCGTTTACC............................................................................................................................................................2413.00300000030000
............................................................................................................................................CAA--GCAAATAGTAGTGTATATGGATGAT..........2813.00310000020000
..........................................................................................................................................................AGTGTATATGGATGATATAGTGATA.2513.00301001010000
...................................................................................................................................................AAATAGTAGTGTATATGGATGAT..........2313.00300000030000
............GTACCGTTTACCTCATTTGT....................................................................................................................................................2013.00303000000000
....................................................................................GGATCAGCTATTTTTCAAAGA...........................................................................2113.00303000000000
.........................................................................................................TTTATTACAGAAGTATTAGTGGACT..................................................2513.00300000030000
..............................................................................................................................................A--GCAAATAGTAGTGTATATGGAT.............2312.00200000020000
..............................................................................................................................................A--GCAAATAGTAGTGTATATG................2012.00201000010000
.................................................................................AATGGATCAGCTATTTTTCAAAG............................................................................2312.00200000020000
.................................................................................................TTCAAAGATTTATTACAGAAGTATTAGT.......................................................2812.00200000020000
.ATTCACAGAGTGTACCGTTTACCT...........................................................................................................................................................2412.00202000000000
....................................................................................................................................................AATAGTAGTGTATATGGATGAT..........2212.00200000020000
...................................................................................................................................................AAATAGTAGTGTATATGGATGATATAGTG....2912.00200000020000
........................................................................................................................................................GTAGTGTATATGGATGATATA.......2112.00200000020000
.....................................................................................................................................................ATAGTAGTGTATATGGATGATATA.......2412.00200000020000
.......................................................................................................................................................AGTAGTGTATATGGATGATATAGT.....2412.00201000010000
.....ACAGAGTGTACCGTTTACCTC..........................................................................................................................................................2112.00200000110000
.......................................................................................................GATTTATTACAGAAGTATTAGTGGACT..................................................2712.00201000010000
.................................................................................................................................................GCAAATAGTAGTGTATATG................1912.00200000020000
.......................................................................................................................................................AGTAGTGTATATGGATGAT..........1912.00201000010000
..........................................................................................................................................................AGTGTATATGGATGATATAGTG....2212.00200000020000
...........................................................................................................TATTACAGAAGTATTAGTGGACT..................................................2312.00200000020000
..........................................................................................................................................AACAA--GCAAATAGTAGTGT.....................1912.00200000020000
....................................................................................................................................ATTCAAAACAA--GCAAATAGTAGT.......................2312.00200000020000
....CACAGAGTGTACCGTTTACC............................................................................................................................................................2012.00201000010000
..............................GTAACACCCCATGGGCAAT...................................................................................................................................1912.00202000000000
........................TCATTTGTAACACCCCATGGGCAA....................................................................................................................................2412.00202000000000
.............TACCGTTTACCTCATTTGTAACACC..............................................................................................................................................2512.00201100000000
.............................................................................................................TTACAGAAGTATTAGTGGACT..................................................2112.00200000020000
......CAGAGTGTACCGTTTACCTC..........................................................................................................................................................2012.00211000000000
......................................................................................................................................TCAAAACAA--GCAAATAGTAGTGT.....................2312.00200000020000
..TTCACAGAGTGTACCGTTTAC.............................................................................................................................................................2112.00200000110000
...........................................................................................................TATTACAGAAGTATTAGTGGACTT.................................................2412.00202000000000
.................................................................................................................................................GCAAATAGTAGTGTATATGGATGA...........2412.00201000100000
...............................................................................................................................................................ATATGGATGATATAGTGATAG2112.00201000010000
....................................................................................................AAAGATTTATTACAGAAGT.............................................................1912.00200000020000
GATTCACAGAGTGTACCGTT................................................................................................................................................................2012.00200000020000
.................................................................................AATGGATCAGCTATTTTTCAAA.............................................................................2212.00200000020000
........................TCATTTGTAACACCCCATGGGCA.....................................................................................................................................2312.00202000000000
.........................................................................................................................................AAACAA--GCAAATAGTAGTGTATATGGAT.............2812.00201000010000
.................................................................................................TTCAAAGATTTATTACAGAAGT.............................................................2212.00201000010000
...................................................................CATTTGGCTTAAAAAATGGATCAGCT.......................................................................................2612.00220000000000
.....................................................................................................................................................ATAGTAGTGTATATGGATGA...........2012.00200000020000
........................................................................................................ATTTATTACAGAAGTATTAGTGGACTTT................................................2812.00211000000000
..............................................................................................TTTTTCAAAGATTTATTACAGAAGTATT..........................................................2812.00201000010000
..................................................................................................................................................CAAATAGTAGTGTATATGGA..............2012.00200000020000
....................................................................................................................AGTATTAGTGGACTTTATTCA...........................................2112.00211000000000
........................................................................................................................................................GTAGTGTATATGGATGATATAGTG....2412.00200000020000
...................................................................................................................................................AAATAGTAGTGTATATGGATGATATA.......2612.00201000010000
..........................................................................................................................................AACAA--GCAAATAGTAGTGTATATGGAT.............2712.00201000010000
............................................................................................................ATTACAGAAGTATTAGTGGA....................................................2012.00200000020000
..................................................................................................................................................CAAATAGTAGTGTATATGGAT.............2112.00210000010000
.................................................................................................................................................GCAAATAGTAGTGTATATGGA..............2112.00200000020000
.....................................................................................GATCAGCTATTTTTCAAAGATT.........................................................................2212.00202000000000
.............................................................................................................................................AA--GCAAATAGTAGTGTATATGGATG............2512.00201000010000
....CACAGAGTGTACCGTTTAC.............................................................................................................................................................1912.00201000010000
...........................................................................................................TATTACAGAAGTATTAGTGGA....................................................2112.00201000010000
GATTCACAGAGTGTACCGT.................................................................................................................................................................1912.00200000020000
..................................................................................ATGGATCAGCTATTTTTCAAAG............................................................................2212.00202000000000
...................................................................................................................................................AAATAGTAGTGTATATGGATG............2112.00200000020000
......................................................................................................AGATTTATTACAGAAGTATTAGTGGACT..................................................2812.00201100000000
......................................................................................................................................................TAGTAGTGTATATGGATGATATAGT.....2512.00200000020000
GATTCACAGAGTGTACCGTTTAC.............................................................................................................................................................2312.00201000010000
..................................................................................................................................TTATTCAAAACAA--GCAAATAGTAGT.......................2512.00201000010000
......................................................................................................AGATTTATTACAGAAGTATTAGTG......................................................2411.00101000000000
..............................................................................AAAAATGGATCAGCTATT....................................................................................1811.00100000100000
......................................................................TTGGCTTAAAAAATGGATCAGCT.......................................................................................2311.00100000010000
...........................................................................................................................................ACAA--GCAAATAGTAGTGTATATG................2311.00100000010000
.................................................................................................................................TTTATTCAAAACAA--GCAAATAGTAGT.......................2611.00100000010000
........................................................................................................................TTAGTGGACTTTATTCAAAACAA--GC.................................2511.00110000000000
..........................ATTTGTAACACCCCATGGGCA.....................................................................................................................................2111.00101000000000
.............................................CAATATGAATATTTAAGAATGCCA...............................................................................................................2411.00101000000000
....................................................................................................................................ATTCAAAACAA--GCAAATAGTAGTGTA....................2611.00100000010000
..............................................................................................................................................A--GCAAATAGTAGTGTATATGGATGAT..........2611.00100000010000
.............................................................................................ATTTTTCAAAGATTTATTACAGAAGTA............................................................2711.00101000000000
.........................................................................................................TTTATTACAGAAGTATTAGTG......................................................2111.00100000010000
....................................................................................................................................................AATAGTAGTGTATATGGATGATA.........2311.00100000010000
..................................................................................ATGGATCAGCTATTTTTCAAA.............................................................................2111.00101000000000
...............................................................................................TTTTCAAAGATTTATTACAGAAGT.............................................................2411.00101000000000
.............................................................................................................................................AA--GCAAATAGTAGTGTATATGG...............2211.00100000010000
..........................................................................CTTAAAAAATGGATCAGC........................................................................................1811.00110000000000
...TCACAGAGTGTACCGTTTACCC...........................................................................................................................................................2211.00100100000000
.....................................................................TTTGGCTTAAAAAATGGAT............................................................................................1911.00100000010000
........................................ATGGGCAATATGAATATTTAAGAATGC.................................................................................................................2711.00110000000000
...................................................................................................................................TATTCAAAACAA--GCAAATAGTAGTG......................2511.00101000000000
..................................................................................................................................TTATTCAAAACAA--GCAAATAGTAGTGT.....................2711.00100000010000
..........................................................................................................................................................AGTGTATATGGATGATATAGTGAT..2411.00100000010000
......................................................................................ATCAGCTATTTTTCAAAGA...........................................................................1911.00101000000000
..............................................................................................................TACAGAAGTATTAGTGGACTTT................................................2211.00100000010000
..........................ATTTGTAACACCCCATGGGC......................................................................................................................................2011.00101000000000
.......................................................................................................................................................AGTAGTGTATATGGATGATATAGTGA...2611.00100000100000
................................................TATGAATATTTAAGAATGCCATT.............................................................................................................2311.00110000000000
.......................................................................................................GATTTATTACAGAAGTATTAGTG......................................................2311.00100000010000
..........................................................................................................................................AACAA--GCAAATAGTAGTGTATATGG...............2511.00100000010000
.............................................................................................ATTTTTCAAAGATTTATTACAGAAGTAT...........................................................2811.00100000010000
..........................................................................................................................................AACAA--GCAAATAGTAGTGTAT...................2111.00100000010000
..............................................................................................................TACAGAAGTATTAGTGGACTTTATTC............................................2611.00110000000000
.......................................................................................................................................CAAAACAA--GCAAATAGTAGTGT.....................2211.00100000010000
...........................TTTGTAACACCCCATGGG.......................................................................................................................................1811.00110000000000
................................AACACCCCATGGGCAATATG................................................................................................................................2011.00101000000000
.........................CATTTGTAACACCCCATGGG.......................................................................................................................................2011.00101000000000
................................................................................AAATGGATCAGCTATTTTTCAAAGA...........................................................................2511.00100000010000
.................................................................................AATGGATCAGCTATTTTTCAA..............................................................................2111.00100000010000
...........................................................................................................................................................GTGTATATGGATGATATAGTGAT..2311.00100000010000
................................................................................................................CAGAAGTATTAGTGGACT..................................................1811.00110000000000
....CACAGAGTGTACCGTTTACCTCATTTG.....................................................................................................................................................2711.00101000000000
...TCACAGAGTGTACCGTTTACCTCATTTG.....................................................................................................................................................2811.00101000000000
........................TCATTTGTAACACCCCATGGGCAATA..................................................................................................................................2611.00101000000000
..........................................................................CTTAAAAAATGGATCAGCTA......................................................................................2011.00100000010000
..........................................................................................................................................AACAA--GCAAATAGTAGTGTATATGGATG............2811.00100000010000
.......................CTCATTTGTAACACCCCATGGGCAAT...................................................................................................................................2611.00101000000000
.......................................................................................................................ATTAGTGGACTTTATTCAA..........................................1911.00101000000000
............................................................................................................................................CAA--GCAAATAGTAGTGTATAT.................2111.00101000000000
.....ACAGAGTGTACCGTTTACCTCATTT......................................................................................................................................................2511.00100000010000
.....................................................................................................................................................ATAGTAGTGTATATGGAT.............1811.00100000010000
..........................................................................................................TTATTACAGAAGTATTAGTGGA....................................................2211.00101000000000
..........................................................................................................................AGTGGACTTTATTCAAAACAA--GCAA...............................2511.00100000010000
............................................................................................................................................................TGTATATGGATGATATAGTGATAG2411.00100000100000
...................................................................................................................................TATTCAAAACAA--GCAAATAGTAGTGTA....................2711.00100000010000
.................................................................................................................................................GCAAATAGTAGTGTATATGGAT.............2211.00100000010000
......................................................................TTGGCTTAAAAAATGGATC...........................................................................................1911.00101000000000
....................................................................................................................................................AATAGTAGTGTATATGGATGATATAGTGA...2911.00100000010000
......................................................................................................AGATTTATTACAGAAGTATTAG........................................................2211.00101000000000
........................................................................GGCTTAAAAAATGGATCAG.........................................................................................1911.00110000000000
.......................................CATGGGCAATATGAATATTTAAGAAT...................................................................................................................2611.00100000010000
..........................................................................................................................................AACAA--GCAAATAGTAGTGTATATGGATGA...........2911.00100000010000
..................................................TGAATATTTAAGAATGCCATTTGGC.........................................................................................................2511.00101000000000
...............................................................................AAAATGGATCAGCTATTTT..................................................................................1911.00100000100000
.................................................................................................TTCAAAGATTTATTACAGAAGTATT..........................................................2511.00101000000000
...........................................................................TTAAAAAATGGATCAGCTATTT...................................................................................2211.00100000010000
...........................TTTGTAACACCCCATGGGCA.....................................................................................................................................2011.00100000100000
......................CCTCATTTGTAACACCCCATGG........................................................................................................................................2211.00101000000000
............................................................................................................ATTACAGAAGTATTAGTGGACTTTATTCAA..........................................3011.00100000010000
.............................TGTAACACCCCATGGGCAATATGA...............................................................................................................................2411.00101000000000
..............................................................................................................................................A--GCAAATAGTAGTGTATATGGATGATA.........2711.00101000000000
......................................................................................................AGATTTATTACAGAAGTATTAGTGGAC...................................................2711.00100100000000
................................................................................................................CAGAAGTATTAGTGGACTTTA...............................................2111.00110000000000
..............................................AATATGAATATTTAAGAATGC.................................................................................................................2111.00100000010000
.............................................................................................................................................AA--GCAAATAGTAGTGTATATG................2111.00100000010000
..............................GTAACACCCCATGGGCAATA..................................................................................................................................2011.00101000000000
...............................................................ATGCCATTTGGCTTAAAAAATGGATCA..........................................................................................2711.00101000000000
.............................................................................................................................................AA--GCAAATAGTAGTGTATATGGA..............2311.00100000010000
....CACAGAGTGTACCGTTTACCT...........................................................................................................................................................2111.00101000000000
.............................................................................................................................................AA--GCAAATAGTAGTGTATATGGATGAT..........2711.00101000000000
........................................................................................................................................................GTAGTGTATATGGATGATATAGTT....2411.00100000010000
.........................CATTTGTAACACCCCATGGGC......................................................................................................................................2111.00101000000000
..............................................................................................................TACAGAAGTATTAGTGGAC...................................................1911.00101000000000
..............................................AATATGAATATTTAAGAATGCC................................................................................................................2211.00100000010000
..................................................................................ATGGATCAGCTATTTTTCAAAGA...........................................................................2311.00100000010000
..................................................................................................................................................CAAATAGTAGTGTATATGGATGAT..........2411.00101000000000
........................................................................................................ATTTATTACAGAAGTATTA.........................................................1911.00101000000000
...................................................................................................................................TATTCAAAACAA--GCAAATAGTAGTGT.....................2611.00100000010000
......................................................................TTGGCTTAAAAAATGGATCAGCTAT.....................................................................................2511.00100000010000
.......................................................................................................................................................AGTAGTGTATATGGATGATAT........2111.00101000000000
.....................................................................................................................................................ATAGTAGTGTATATGGATGATAT........2311.00101000000000
......................................................................................................................................................TAGTAGTGTATATGGATGATATAGTGA...2711.00101000000000
...TCACAGAGTGTACCGTTTACCTCATTTGT....................................................................................................................................................2911.00100000010000
........................................................................................................................................AAAACAA--GCAAATAGTAGTGTAT...................2311.00100000010000
GATTCACAGAGTGTACCGTTTACCTCAT........................................................................................................................................................2811.00100000010000
...........................TTTGTAACACCCCATGGGC......................................................................................................................................1911.00101000000000
...................................................................CATTTGGCTTAAAAAATGGATCA..........................................................................................2311.00101000000000
..................................................................................................................................................CAAATAGTAGTGTATATGGATGATAT........2611.00100000010000
.........................................................................................................................................AAACAA--GCAAATAGTAGTGTAT...................2211.00100000010000
......................................................................TTGGCTTAAAAAATGGATCAGC........................................................................................2211.00100000010000
.....................................................ATATTTAAGAATGCCATTTGG..........................................................................................................2111.00101000000000
.....ACAGAGTGTACCGTTTACCTCATTTG.....................................................................................................................................................2611.00101000000000
.............................................................................................................TTACAGAAGTATTAGTGGA....................................................1911.00100000010000
............................................................................................................ATTACAGAAGTATTAGTGGACTT.................................................2311.00101000000000
.......AGAGTGTACCGTTTACCTCA.........................................................................................................................................................2011.00101000000000
......................................................................................................................................................TAGTAGTGTATATGGATGATATAG......2411.00100001000000
...................................................GAATATTTAAGAATGCCATTTGGC.........................................................................................................2411.00101000000000
........................................................................................................ATTTATTACAGAAGTATTAGTG......................................................2211.00101000000000
........................TCATTTGTAACACCCCATGGGCAATATG................................................................................................................................2811.00101000000000
..........................................................................................................TTATTACAGAAGTATTAGTGG.....................................................2111.00101000000000
....................................................................................................................................................AATAGTAGTGTATATGGAT.............1911.00100000010000
...........................................GGCAATATGAATATTTAAGAATG..................................................................................................................2311.00100100000000
.............................................................................................ATTTTTCAAAGATTTATTACAGA................................................................2311.00101000000000
...................................ACCCCATGGGCAATATGAAT.............................................................................................................................2011.00101000000000
.......................................................................................................................................................AGTAGTGTATATGGATGATATAGTGATAG2911.00100000010000
...TCACAGAGTGTACCGTTTACCTC..........................................................................................................................................................2311.00100000010000
.......................................................................................................................................................AGTAGTGTATATGGATGA...........1811.00100000010000
.......................................................................TGGCTTAAAAAATGGATCAGC........................................................................................2111.00110000000000
..............................................................AATGCCATTTGGCTTAAAAAATG...............................................................................................2311.00101000000000
................................AACACCCCATGGGCAATATGA...............................................................................................................................2111.00101000000000
.............................................................................................................................GGACTTTATTCAAAACAA--GC.................................2011.00101000000000
.....................................................................................................................................TTCAAAACAA--GCAAATAGTAGT.......................2211.00100000010000
.......................................................................................TCAGCTATTTTTCAAAGAT..........................................................................1911.00101000000000
.................................................................................................................................................GCAAATAGTAGTGTATATGGATG............2311.00100000010000
..........................................................................................................................................................AGTGTATATGGATGATATAGTGATAG2611.00101000000000
....................................................................................................................AGTATTAGTGGACTTTATTCAA..........................................2211.00100000010000
...................................................................................................................................................AAATAGTAGTGTATATGGATGA...........2211.00100000010000
.............................................................GAATGCCATTTGGCTTAAAAAAT................................................................................................2311.00101000000000
.....................................................................................................................................................ATAGTAGTGTATATGGATGATATAGTGAT..2911.00100000010000
.......................................................................................................................................................AGTAGTGTATATGGATGATATA.......2211.00100000100000
.....ACAGAGTGTACCGTTTACCT...........................................................................................................................................................2011.00101000000000
.........................................................................................................................................................TAGTGTATATGGATGATATAGTGA...2411.00100000010000
..............ACCGTTTACCTCATTTGTA...................................................................................................................................................1911.00101000000000
............................................................................................TATTTTTCAAAGATTTATTACAGAAG..............................................................2611.00101000000000
..............................GTAACACCCCATGGGCAATATGAAT.............................................................................................................................2511.00101000000000
..................................................................................................................................................CAAATAGTAGTGTATATGGATGATATAGT.....2911.00100000010000
........................................................................................................................................................GTAGTGTATATGGATGATATAGTGATA.2711.00100000010000
.......................................................................................................GATTTATTACAGAAGTATT..........................................................1911.00101000000000
................CGTTTACCTCATTTGTAAC.................................................................................................................................................1911.00101000000000
...........................TTTGTAACACCCCATGGGCAATATGA...............................................................................................................................2611.00101000000000
...........................................................................................................................GTGGACTTTATTCAAAACAA--GCA................................2311.00101000000000
..........................................................................................................TTATTACAGAAGTATTAGTGGACT..................................................2411.00100000010000
....................................................................................................................................................AATAGTAGTGTATATGGATGATATAGT.....2711.00100000010000
....................................................................................................................................ATTCAAAACAA--GCAAATAGT..........................2011.00101000000000
................................................................................AAATGGATCAGCTATTTTTCAAAGATT.........................................................................2711.00100000010000
......................................................................................................................................TCAAAACAA--GCAAATAGTAGT.......................2111.00100000010000
..................................................................................ATGGATCAGCTATTTTTCAAAGATT.........................................................................2511.00100000010000
........................................................................................................................TTAGTGGACTTTATTCAAAACAA--GCA................................2611.00110000000000
............GTACCGTTTACCTCATTTGTAACACCC.............................................................................................................................................2711.00100100000000
.....................................................................................................................................................ATAGTAGTGTATATGGATGATATAGTG....2711.00100000010000
...........................................................................................................................................ACAA--GCAAATAGTAGTGTATATGGAT.............2611.00100000010000
....................................................................................................................................................AATAGTAGTGTATATGGATGATATA.......2511.00100000010000
............................TTGTAACACCCCATGGGCA.....................................................................................................................................1911.00101000000000
...............................TAACACCCCATGGGCAATATGA...............................................................................................................................2211.00101000000000
....................................................................................................................AGTATTAGTGGACTTTATTCAAAACAA--G..................................2811.00101000000000
droEre2
GATGAAAAATCCGTGCCGTATACAGCATTTATTACCTCTCAAGGACAATATGAGTATTTGAGGCTGCCTTTTGGATTAAA-AATGGCGCGGCAGTGTTTCAACGATTTATTTCAGAAACGTTTTCAGATTTTATAAGAAAGAA--GAACCTAGTAATTTATATGGACGATATAGTTATTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 02:38 PM