ID:

dps_1063

 Coordinate:

3:6949325-6949475 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.2 -38.0 -38.0

Flybase annnotation

exon [dpse_GLEANR_14478:2]; CDS [Dpse\GA24385-cds]; intron [Dpse\GA24385-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
Gypsy8-I_Dpse-intLTRGypsy-

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCCATGTGTCGTGTCGTCGGGTATAAGTGTGCCACCCCAGACTGCCGCCCAACAGCTAGAAGCGGAAAACAGCCTAAGCAGATCTGGGGTGGAGACGGGAGGGGGAGGCGGCGGGAGCAGCGGAGCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGGCAACAGCAGCAGCAGCAGCAGCAGAAGTAGAATCAACAGCAACAGCAACAGCAACAGCGACAGCGACGCCGACT
**************************************************.....(((....((((((((..(((......((((((((((..........(((....((.((....)).))....))))))).))))))...))).))))))))..(((....))).((((....((....))....)))).))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM444067
head
 M059
embryo
 SRR902011
testis
....................................CTCAGACTGCCGCGCAACAGC.................................................................................................................................................................................................. 21 2 1 2.00 2 2 0 0 0
....................................CTCAGACTGCCGCGCAACA.................................................................................................................................................................................................... 19 2 1 2.00 2 2 0 0 0
...............................................................................................ACGGGAGGGGGAGGCGGCGGG....................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
................................................................................................CGGGAGGGGGAGGCGGCGGG....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
...................................ACTCAGACTGCCGCGCAACAGC.................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................................ACAGCGACAGCGACGCCGACT 21 0 1 1.00 1 0 0 1 0
...............................................................................................ACGGGAGGGGGCGGCGGCGGG....................................................................................................................................... 21 1 1 1.00 1 0 1 0 0
...................................ACTCAGACTGCCGCGCAACA.................................................................................................................................................................................................... 20 3 3 0.33 1 1 0 0 0
........................................GACTGCCGCGCAACAGCACGA.............................................................................................................................................................................................. 21 3 4 0.25 1 1 0 0 0
...................................................................................................GAGGGGGAGGCGGGGGGA...................................................................................................................................... 18 1 15 0.20 3 0 0 0 3
...............................................................................................ACCGGCGGGGGAGGAGGCGGGAG..................................................................................................................................... 23 3 7 0.14 1 0 1 0 0
.........................................................................................................................................................................................................................AACAGCAACAGCAACAGCGACA............ 22 0 10 0.10 1 1 0 0 0
.......................................................................................................................................................................................................................GCAACAGCAACAGCAACAGCGAC............. 23 0 13 0.08 1 0 0 1 0
................................................GTCAACAGCTATAAGCGGAA....................................................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0
................................................GTCAACAGCTATAAGCGGA........................................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0
...................................ACTCAGACTGCCGCGCAAC..................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................GCAACAGCAACAGCAACAGC................ 20 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GAGGTACACAGCACAGCAGCCCATATTCACACGGTGGGGTCTGACGGCGGGTTGTCGATCTTCGCCTTTTGTCGGATTCGTCTAGACCCCACCTCTGCCCTCCCCCTCCGCCGCCCTCGTCGCCTCGGGTGGGTATCCAGTAACCAGAAAAAGCAGCCGCAGTTGCATGACGCTGCCGTTGTCGTCGTCGTCGTCGTCGTCTTCATCTTAGTTGTCGTTGTCGTTGTCGTTGTCGCTGTCGCTGCGGCTGA
**************************************************.....(((....((((((((..(((......((((((((((..........(((....((.((....)).))....))))))).))))))...))).))))))))..(((....))).((((....((....))....)))).))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M022
male body
............................................................................................CTCTGCTCTCCCCATCCGCTGCC........................................................................................................................................ 23 3 1 1.00 1 0 1 0
.............................CACGGCGGGGTCTGAGGGCG.......................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0
..............AGCAGCCCAAATTCATACA.......................................................................................................................................................................................................................... 19 3 16 0.06 1 1 0 0
.............................................................................................................................................................................................................................CGTTGTCGTTGTCGCTGTCG.......... 20 0 18 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:6949275-6949525 - dps_1063 CTCCATGTGTCGTGTCGTCGGGTATAAGTGTGCCACCCCAGACTGCC-------------------GCCCAACAGCTA----------GA--------------------------AGCGGAAAACAGCCTAAGCAGA--TCTGG---G---GTGGAGACGGGAG---GGG-----------------------------------------GAGGCGGCGGGAGCAGCGGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------C--------------------------------------------------------------AGCAGCAG---CA---GC---AG---CAGAAGTAG--------------AAT------------CAACA---------GCAACAGCAACAGCA--ACAGCGACAGCGACGCCGACT
droPer2 scaffold_78:11803-12019 + AA-------------------------TTGTGGCAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACGAAGAGGGCCCCGAGAGGCGGCCACC---GCAAATCGA-------G---GAGGAGCAGCAG------------------------------------CAGCAGCACCAGCAGCAGCCGCAGCAGCAGCAGCC--------------------------------GCAGCAGCA-------GCAG---------------CAGCACCAGCATCAGC-----------------------------------------------------------AG---CACCAGCAGCAGCAGCAG---CAGCCGCAG--------------CAG------------CAGCA---------GCAGCACCAGCATCA--GCAGCGCCAGCAGCAGCAGCA
droWil2 scf2_1100000008330:366-588 - GA-------------------------TCG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------ATGGAATAGTGGTCGGAGCAGATGAGGCA---G---CAGGA-------AGAGGCGGAGCGAGAGCTGCTGAGGTGGGAAAGGGCCCA---------ACAGGAGGAGGAGCGGCTGA-------------------AACGGGCAAGAG-------------------------AACGGCTGGCGATGG-C------A------ATGCTG------CA--------------------------------------------------ACAACAACAGCAG------------------CAA---CAA---TT-----------G---------C------AGCATCA---------GCAACAGCAACAGCA--GCAACGAATGCAACAGCAACA
droVir3 scaffold_12963:19877202-19877403 - GA-------------------------CTGCA-------------------------------GCG-----ACAGCGAAACGCCAACGGC------------------------------------AGCAGCAGCA---G---CT---G---CTGCA-------------------------------------------------------GCAGCGGCGGCG-----------------------------------------------------------GCGGCGACGG----CAGCGG---------------CGACAG---CAGCAGCAGCAGCAGCCGCTCAGCAGCATGCGCGTCATGCATTGCGTGTTGCACAA---------------CAA---CA---GCAGCAGCAACAA------CAAC------A-----------------ACAACA---------GCAGCAGCAGCAGCA--GCAGCAGCAGCGACAGCAGC-
droMoj3 scaffold_6540:7503241-7503460 + GT---------------------ATAAATGCGCCACCT-AATCAAAC-------------------TGTCAACTCGCT----------GC------------------------------------AGCAGCAGCA---G------------CTGCA-ACAGCAACAACA------------------------------------------GCAGCAGCAACAACAGCGAT-------------------TGCAAATGATAAACCATCAGCAA-TTTAATCAGCTGCAGCAG-------CAACTGGCGCAGCAACAACAACAG------C--------------------------------------------------------------------AG---CA---GCAGCAGCAACAACAGCAG--------------CAG------------CAGCA---------GCAGCAACAACAACA--ACAGCAGCAGCAACAGCATCC
droGri2 scaffold_3013:4254-4482 - CCTCATCTG--GGAGCGGCGGGCGCAGTGGCGCTAACACA------CGCTCTGGTCAGCAGCAGCA----------------------GC--------------------------AGCGGC-AGCAGCAGCAGCAGCAGCGGCA----------------GCAG---CAGCAGCAGCAG---------------------CA---------GCAGCAGCGGCAGCAGCA--------------------------------------------------GCAGCGGCAGCAG-------CAGCAGCAGCAGCAGCAGCAGCAG------CA--------------------------------------------------G---------------------CGGCAGCAGCAG---CAGCGGCAG--------------CGG------------CAGCG---------GCAGCAGCAGCAGCA--GCAGCGGCAGCAGCAGCAGCA
droAna3 scaffold_13340:9862195-9862433 + CTCGATGTG-----------------TCC--------ATA------CTGTCCGGCCACCTACAGCA----------------------GG--ATCGATACGCTGCGTTCGCACCTGCGCGTAAAGCATCCTGACCGCCT-------------GCTGA------------------------------AGCTGAACTCGTC-CATTTAAGGGCGTGGTAGGGGCCAGAGTACA-------------------GCCCACC-ATCG-----------------------CTA-----TTACTA--TCA------G------CAACAT------C--------------------------------------------------------------AACATCAA---CA---GCAACAGCAGCAG------CAACACCGGCA-----------------GCAACA---------GCAACACCAGCAGCA--GCAGCAACAGTCACACCAGC-
droBip1 scf7180000395751:384937-385128 - A-------------------------------------------------------------------------------------------------------------------GGCGGAAAACAGCCTAAGCACAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCCGTAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGACGGCGTCAACGTACGACGACGG---------------CAACAG------C--------------------------------------------------------------AACAGCAA---CA---GCAGCGGCAGCGG------CAGC------G---------C--------CAGCAG-TACAACAGTAACATC---AGCTGCGCAGCAACAGCGACGCTGACA
droKik1 scf7180000302510:455616-455832 - AA-------------------------GTGCGCAACTCTAGTCGCAT-------------------TCGCAACCTTGT----------GG--------------------------AGCTGAAGGCACGCCAGGAGGAAGAGC-----G---CCAGCGAAGGGAG---CGCGAGAATCTG------------------------------------TATCAGGAGCGGCAGAACGCACACTGGCTGGCACCGCCCACGCA---------------------------------------ACAG---------------CAGCAATATCAGCAGC-----------------------------------------------------------AG---CAGCAAC---------AG---CAG------CAGC------A--GCAG------------CAACA---------ACAGCAGCAACAGCA--ACAACAACAGCAGCGCACACG
droFic1 scf7180000454066:1608624-1608813 + TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCAGAAG---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------CA--------------------------------------------------GCGGCAGCAGCAA------------------------CAA------CAAC------A--G------C------AGCAACA---------GCAACAGCCAGAGCAGTGCTGCTACTGCGACGCCGGCA
droEle1 scf7180000491102:21462-21653 + TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCTGCGGCAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------C--------------------------------------------------------------AACAGCAA---CA---GCAGCAGCAACAA------CAAC------A---------G------CACAGCA---------GCAACAGCCCAAGCAGCGCTGCAACTGCGTCGCCGGCA
droRho1 scf7180000769355:142556-142761 + TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGCCAGCGGCAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------C--------------------------------------------------------------AACAACA----CA---GCAGCAGCAACAA------CAAA------ACAGCAGCAGCAGCAGCAGCAACA---------GCAACAGCCCGAGCAGCGCTGCAACTGCGACGCCGGCA
droBia1 scf7180000301754:217124-217315 + TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGATGG-A------G------CAGCAG------A--------------------------------------------------------------GGCAGCAG---CA---GCAGCAGCAACAA------CAAC------A---------C--------CGGCA---------GCAACAGCCCCAGCAGCGCTGCCACAGCGACGCCGGCT
droTak1 scf7180000415363:112435-112623 + TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGCCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AACAGCAA---CA---GCAACAGCAACAA------CAAC------A------------------CAACA---------GCAACAGCCCGAGCAGCGCTGCAGCTGCGACGTCGGCA
droEug1 scf7180000409209:66955-67140 + TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------CA--------------------------------------------------GCAGCAACAGCAA------------------------TAA------CAAC------C---------C------AGCAACA---------GCAACAGTAAAAGCTGCGCTGCAACTGCGAAGCCAGCA
dm3 chr2R:6112971-6113144 - TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------C------AGCAACA---------GCAACAGTACAAGCAGTGCTGCTGCTGCGACGCCAGCA
droSim2 2r:6880425-6880598 - TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------C------AGCAACA---------GCAACAGTACAAGCAGTGCTGCGACTGCGACGCCGGCA
droSec2 scaffold_1:3719451-3719624 - TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------C------AGCAACA---------GCAACAGTACAAGCAGTGCTGCGACTGCGACGCCGGCA
droYak3 3L:12376288-12376515 + TCTGGT-----------------CCAGTCGTGCCACTC--------------------------------------AAAGCCCCAACAGC--------------------------AGCAG-CAACAACTCAAGGAAATTGTC-----G---CCG--------------T------CGAGCGGCAAACACGCCAAAGT----T---------GCCGCGAGTGCAAGTGCAAG----------------------------TATGTCTTTGTGCCCCATCAGCAGCAGCAACA-ACAGCAGCAG---------------CAGCAACAACAGCAGC-----------------------------------------------------------AG---------------CAACAA---CAG------CAAC-----------------------AACAACAGCT------ACAACAGCAACAGCA--GCAGCAACAGCAGTAGCAACA
droEre2 scaffold_4929:8265172-8265351 + TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------CAGCAACAGCAACA---------GCAACAGTACAAGCAGTGCTGCAACTGCGACGCCGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTCCATGTGTCGTGTCGTCGGGTATAAGTGTGCCACCCCAGACTGCC-------------------GCCCAACAGCTA----------GA--------------------------AGCGGAAAACAGCCTAAGCAGA--TCTGG---G---GTGGAGACGGGAG---GGG-----------------------------------------GAGGCGGCGGGAGCAGCGGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------C--------------------------------------------------------------AGCAGCAG---CA---GC---AG---CAGAAGTAG--------------AAT------------CAACA---------GCAACAGCAACAGCA--ACAGCGACAGCGACGCCGACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................ACGGGAG---GGG-----------------------------------------GAGGCGGCGGG..............................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................CGGGAG---GGG-----------------------------------------GAGGCGGCGGG..............................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGACAGCGACGCCGACT2111.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCA--ACAGCGACA............22100.1010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAGCA--ACAGCGAC.............23130.0810010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAGCA--ACAGC................20200.0510100000000
droPer2
AA-------------------------TTGTGGCAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACGAAGAGGGCCCCGAGAGGCGGCCACC---GCAAATCGA-------G---GAGGAGCAGCAG------------------------------------CAGCAGCACCAGCAGCAGCCGCAGCAGCAGCAGCC--------------------------------GCAGCAGCA-------GCAG---------------CAGCACCAGCATCAGC-----------------------------------------------------------AG---CACCAGCAGCAGCAGCAG---CAGCCGCAG--------------CAG------------CAGCA---------GCAGCACCAGCATCA--GCAGCGCCAGCAGCAGCAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------G........................................................................................................................................................................................................................................................................................................................................................................................................22314.00420420000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GA.......................................................................................................................................................................................................................................................................................................................................................................................................23312.33370370000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GAC......................................................................................................................................................................................................................................................................................................................................................................................................2439.67293260000
................................................................................................................................................C---GCAAATCGA-------G---GAGGAGCAGC...........................................................................................................................................................................................................................................................................................................................................2114.004040000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACGA....................................................................................................................................................................................................................................................................................................................................................................................................2633.009090000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................2132.337070000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACG.....................................................................................................................................................................................................................................................................................................................................................................................................2532.337070000
................................................................................................................................................C---GCAAATCGA-------G---GAGGAGCAGCAG------------------------------------.....................................................................................................................................................................................................................................................................................................2312.002020000
.................................CAGCCTACGCCACC-------------------AGCC------------------GA...................................................................................................................................................................................................................................................................................................................................................................................................................................2041.506060000
..................................AGCCTACGCCACC-------------------AGCC------------------GAG-------------------------G........................................................................................................................................................................................................................................................................................................................................................................................................2131.334040000
.................................CAGCCTACGCCACC-------------------AGCC------------------G....................................................................................................................................................................................................................................................................................................................................................................................................................................1941.255050000
............................................................................................................................................CCACC---GCAAATCGA-------G---GAGGAG...............................................................................................................................................................................................................................................................................................................................................2111.001010000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACGAA...................................................................................................................................................................................................................................................................................................................................................................................................2721.002020000
..................................................................................................................................CGAGAGGCGGCCACC---GCAAATCGA-------G---G....................................................................................................................................................................................................................................................................................................................................................2611.001010000
................................................................................................................................................C---GCAAATCGA-------G---GAGGAGCAGCAG------------------------------------C....................................................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................GAGGCGGCCACC---GCAAATCGA-------G---GAGGA................................................................................................................................................................................................................................................................................................................................................2711.001010000
..........................................................................................................................................GGCCACC---GCAAATCGA-------G---GAGGA................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................AGAGGCGGCCACC---GCAAATCGA-------G---GAGG.................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................................................................AGCC------------------GAG-------------------------GACGAAGAGGGCC............................................................................................................................................................................................................................................................................................................................................................................................2030.672200000
..................................AGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GAC......................................................................................................................................................................................................................................................................................................................................................................................................2330.672020000
..................................AGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GA.......................................................................................................................................................................................................................................................................................................................................................................................................2230.672020000
......................................TACGCCACC-------------------AGCC------------------GAG-------------------------GACGAAGAGG...............................................................................................................................................................................................................................................................................................................................................................................................2620.501010000
.........................................................................................................................................................TCGA-------G---GAGGAGCAGCAG------------------------------------CAG..................................................................................................................................................................................................................................................................................................2020.501010000
............................TGTGGCAGCCTACGCCACC-------------------AGCC------------------G....................................................................................................................................................................................................................................................................................................................................................................................................................................2440.502020000
................................................................................................................................................C---GCAAATCGA-------G---GAGGAGC..............................................................................................................................................................................................................................................................................................................................................1820.501010000
.....................................................................C------------------GAG-------------------------GACGAAGAGGGCCC...........................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
..............................................................................................................................................ACC---GCAAATCGA-------G---GAGGAGC..............................................................................................................................................................................................................................................................................................................................................2020.501010000
.........................................................................................................................................................TCGA-------G---GAGGAGCAGCAG------------------------------------CAGCAG...............................................................................................................................................................................................................................................................................................2320.501010000
........................................................................................GAG-------------------------GACGAAGAGGGCCCCGAGG......................................................................................................................................................................................................................................................................................................................................................................................2220.501100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCA--GCAGCGCCAGCAGC.......2130.331010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCATCA--GCAGCGCCAGCAGC.......2330.331001000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GT.......................................................................................................................................................................................................................................................................................................................................................................................................2330.331010000
....................................CCTACGCCACC-------------------AGCC------------------GAG-------------------------GA.......................................................................................................................................................................................................................................................................................................................................................................................................2030.331010000
....................................CCTACGCCACC-------------------AGCC------------------GAG-------------------------GACGA....................................................................................................................................................................................................................................................................................................................................................................................................2330.331010000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GAA......................................................................................................................................................................................................................................................................................................................................................................................................2430.331010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCATCA--GCAGCGCCAGCAG........2230.331010000
.....................................CTACGCCACC-------------------AGCC------------------GAG-------------------------G........................................................................................................................................................................................................................................................................................................................................................................................................1830.331010000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACGATT..................................................................................................................................................................................................................................................................................................................................................................................................2830.331010000
..................................AGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACG.....................................................................................................................................................................................................................................................................................................................................................................................................2430.331010000
.................................CAGCCTACGCCACC-------------------AGCC------------------GAG-------------------------GACA.....................................................................................................................................................................................................................................................................................................................................................................................................2530.331010000
.................................CAGCCTACGCCACC-------------------AGCC------------------GT...................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251010000
...................................GCCTACGCCACC-------------------AGCC------------------GA...................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251010000
...........................TTGTGGCAGCCTACGCCACC-------------------AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--GCAGCGCCAGCAGCAGCA...2150.201010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--GCAGCGCCAGCAGCAGCAG..2250.201010000
.............................................................................................................................................................................................................................................................................................AGCAGCA-------GCAG---------------CAGCACCAGCAT...................................................................................................................................................................................2350.201010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------CAG------------CAGCA---------GCAGCACCAGCAT.........................2350.201010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------CAGCA---------GCAGCACCAGCATCA--GCA..................2550.201010000
................................................................................................................................................................................................................................................................................................AGCA-------GCAG---------------CAGCACCAGCATCAGC-----------------------------------------------------------A...................................................................................................................2550.201010000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCAGCAGCAG---CAGCCG....................................................................................2350.201010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCA--GCAGCGCCAGCAG........1860.171010000
.........................................................................................................................................................................................................................................................CC--------------------------------GCAGCAGCA-------GCAG---------------CAGCACCAGC.....................................................................................................................................................................................2560.171010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAG--------------CAG------------CAGCA---------GCAGCACCAGC...........................2560.171010000
....................................................................................................................................................................................................................................................................................................................................CAGCATCAGC-----------------------------------------------------------AG---CACCAGCAGC.....................................................................................................2280.131001000
..........................................................................................................................................................CGA-------G---GAGGAGCAGCAG------------------------------------CAG..................................................................................................................................................................................................................................................................................................19110.091010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCAG--------------CAG------------CAGCA---------GC....................................19200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCAGCAGCAG---C.........................................................................................18200.051010000
......................................................................................................................................................................................................................................................CAGCC--------------------------------GCAGCAGCA-------GCAG---------------C..............................................................................................................................................................................................19200.051010000
................................................................................................................................................................................................................................................CAGCAGCAGCC--------------------------------GCAGCAGCA-------GCA...............................................................................................................................................................................................................23200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG---CAGCCGCAG--------------CAG------------CA..................................................23200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAG---CAGCCG....................................................................................18200.051010000
.......................................................................................................................................................................................................................................CAGCCGCAGCAGCAGCAGC...................................................................................................................................................................................................................................................................19200.051010000
droWil2
GA-------------------------TCG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------ATGGAATAGTGGTCGGAGCAGATGAGGCA---G---CAGGA-------AGAGGCGGAGCGAGAGCTGCTGAGGTGGGAAAGGGCCCA---------ACAGGAGGAGGAGCGGCTGA-------------------AACGGGCAAGAG-------------------------AACGGCTGGCGATGG-C------A------ATGCTG------CA--------------------------------------------------ACAACAACAGCAG------------------CAA---CAA---TT-----------G---------C------AGCATCA---------GCAACAGCAACAGCA--GCAACGAATGCAACAGCAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................2388.5068264020
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGA.................................................................................................................................................................................................................23158.331250125000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCG..................................................................................................................................................................................................................22155.2779075220
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGG....................................................................................................................................................................................................................20154.9374068240
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................2482.7522319000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGC...................................................................................................................................................................................................................21152.6039036210
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2281.6313111010
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTG.....................................................................................................................................................................................................................19151.6024020040
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGATG...............................................................................................................................................................................................................25151.3320117020
.........................................................................................................................................................................CGGAGCGAGAGCTGCTGAGGTGG.............................................................................................................................................................................................................................................................................................................................2391.3312011100
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGAT................................................................................................................................................................................................................24151.1317015020
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGATGG-.............................................................................................................................................................................................................26151.0716016000
.............................G---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................2280.88707000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGGCGA.................................................................................................................................................................................................................22150.8713013000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGGCG..................................................................................................................................................................................................................21150.8012012000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGT.................................................................................................................................................................................................................23150.731108030
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCT......................................................................................................................................................................................................................18150.671007030
.........................................................................................................................................................................CGGAGCGAGAGCTGCTGAGGTG..............................................................................................................................................................................................................................................................................................................................2290.56504010
.......................................................................................................................................................................................................CCCA---------ACAGGAGGAGGAGCGGC........................................................................................................................................................................................................................................................................................2120.50101000
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------AT.......................................................................................................................................................................................................................................................................................................................................................................................................2580.50404000
........................................................................................................................................................................................................CCA---------ACAGGAGGAGGAGCGGCTG......................................................................................................................................................................................................................................................................................2220.50101000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGG....................................................................................................................................................................................................................19150.47707000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGCGAGAGC........................................................................................................................................................................................................................................................................................................................................24130.46606000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGCGAGAG.........................................................................................................................................................................................................................................................................................................................................23130.46605100
............................................................................................................................................................A-------AGAGGCGGAGCGAGAGCTGCTG...................................................................................................................................................................................................................................................................................................................................23110.45505000
................................................................................................................................TCGGAGCAGATGAGGCA---G---CAGGA-------AG.......................................................................................................................................................................................................................................................................................................................................................25120.42500050
.......................................................................................................................................................................GGCGGAGCGAGAGCTGCTGAGG................................................................................................................................................................................................................................................................................................................................22100.40413000
...............................................................................................................................................................................................................................................................GGCAAGAG-------------------------AACGGCTGGCGATGG-.............................................................................................................................................................................................................23150.40606000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGCGAG...........................................................................................................................................................................................................................................................................................................................................21130.38505000
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2180.38312000
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGGAGCGA............................................................................................................................................................................................................................................................................................................................................23120.33404000
.................................................................................................................................................................................................AAAGGGCCCA---------ACAGGAGGAGGA.............................................................................................................................................................................................................................................................................................22130.31404000
.........................................................................................................................................................................CGGAGCGAGAGCTGCTGAG.................................................................................................................................................................................................................................................................................................................................19110.27303000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGGC...................................................................................................................................................................................................................20150.27404000
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2080.25211000
......................................................................................................................................CAGATGAGGCA---G---CAGGA-------AGAGG....................................................................................................................................................................................................................................................................................................................................................22120.25300030
..........................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------G---------C------AGCATCA---------GCAACAGCAACAGCA--G....................2640.25100010
..........................................................................................................................................TGAGGCA---G---CAGGA-------AGAGG....................................................................................................................................................................................................................................................................................................................................................18120.25303000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------G---------C------AGCATCA---------GCAACAGCAACAG.........................2340.25101000
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGGAGC..............................................................................................................................................................................................................................................................................................................................................21120.25303000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGCGAGA..........................................................................................................................................................................................................................................................................................................................................22130.23302100
............................................................................................................................................................A-------AGAGGCGGAGCGAGAGCTG......................................................................................................................................................................................................................................................................................................................................20140.21303000
.................................................................................................................................................................................................................................................................CAAGAG-------------------------AACGGCTGGCGATGG-C------......................................................................................................................................................................................................22150.20303000
.........................................................................................................................................................................CGGAGCGAGAGCTGCTGAGG................................................................................................................................................................................................................................................................................................................................20100.20202000
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------ATG......................................................................................................................................................................................................................................................................................................................................................................................................2650.20101000
.............................................AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------ATGGAA...................................................................................................................................................................................................................................................................................................................................................................................................2750.20101000
............................................................................................................................................................A-------AGAGGCGGAGCGAGAGCTGCTGAGG................................................................................................................................................................................................................................................................................................................................26100.20200101
..............................................................................................................................................................................................................................................................GGGCAAGAG-------------------------AACGGCTGGCGATG...............................................................................................................................................................................................................23150.20303000
.............................................................................................................................TGGTCGGAGCAGATGAGGCA---G---CAGG.................................................................................................................................................................................................................................................................................................................................................................25110.18202000
.........................................................................................................................................................................................GAGGTGGGAAAGGGCCCA---------ACAGG....................................................................................................................................................................................................................................................................................................23110.18202000
....................................................................................................................................................................AGAGGCGGAGCGAGAGCTGCTG...................................................................................................................................................................................................................................................................................................................................22110.18202000
........................................................................................................................................................................................TGAGGTGGGAAAGGGCCCA---------ACAGG....................................................................................................................................................................................................................................................................................................24110.18200020
.......................................................................................................................................AGATGAGGCA---G---CAGGA-------AGAGG....................................................................................................................................................................................................................................................................................................................................................21120.17202000
.................................................................................................................................................................................................AAAGGGCCCA---------ACAGGAGGAGGAG............................................................................................................................................................................................................................................................................................23120.17202000
..........................................................................................................................................TGAGGCA---G---CAGGA-------AGAGGCGGA................................................................................................................................................................................................................................................................................................................................................22120.17201010
................................................................................................................................TCGGAGCAGATGAGGCA---G---CAGG.................................................................................................................................................................................................................................................................................................................................................................22120.17201010
.............................................................................................................................................................................................TGGGAAAGGGCCCA---------ACAGGAGGAGG..............................................................................................................................................................................................................................................................................................25120.17202000
................................................................................................................................TCGGAGCAGATGAGGCA---G---CAGGA-------A........................................................................................................................................................................................................................................................................................................................................................24120.17202000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGCGAGAGCTG......................................................................................................................................................................................................................................................................................................................................26130.15202000
.................................................................................................................................................................................................AAAGGGCCCA---------ACAGGAGGA................................................................................................................................................................................................................................................................................................19130.15200020
............................................................................................................................................................A-------AGAGGCGGAGCGAGAGC........................................................................................................................................................................................................................................................................................................................................18140.14202000
...................................................................T-------CGGAGAACCAGCAGTGG------------------------ATGGAA...................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
..............................................C-------------------GT-------CGGAGAACCAGCAGTGG------------------------ATG......................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
..................................................................GT-------CGGAGAACCAGCAGTGG------------------------ATGG.....................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
......................................................................................................................................................................................................................................GA-------------------AACGGGCAAGAG-------------------------AACGGCTG.....................................................................................................................................................................................................................22150.13202000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTG.....................................................................................................................................................................................................................18150.13202000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGATA...............................................................................................................................................................................................................25150.13202000
...............................................................................................................................................................................................................................................................GGCAAGAG-------------------------AACGGCTGGCG..................................................................................................................................................................................................................19150.13202000
.................................................................................................................................................................................................................................................................CAAGAG-------------------------AACGGCTGGCGATGG-C------A------...............................................................................................................................................................................................23150.13202000
...............................................................................................................................................................................................................................................................GGCAAGAG-------------------------AACGGCTGGCGATG...............................................................................................................................................................................................................22150.13202000
.............................G---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------AT.......................................................................................................................................................................................................................................................................................................................................................................................................2480.13101000
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------G........................................................................................................................................................................................................................................................................................................................................................................................................2480.13110000
.............................................AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................2180.13110000
.A-------------------------TCG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................2580.13101000
.................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAG------------------CAA---CAA---TT-----------G---------C------AG....................................................2280.13101000
............................CG---------------AC-------------------GT-------CGGAGAACCAGCAGTGG------------------------ATT......................................................................................................................................................................................................................................................................................................................................................................................................2680.13100010
GA-------------------------TCG---------------AC-------------------GT-------CGGAGAACCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2280.13101000
.......................................................................................................................................................................GGCGGAGCGAGAGCTGCTGAGGTGG.............................................................................................................................................................................................................................................................................................................................2590.11101000
............................................................................................................................................................................AGCGAGAGCTGCTGAGGTGGGAAAA........................................................................................................................................................................................................................................................................................................................2590.11101000
............................................................................................................................................................................AGCGAGAGCTGCTGAGGTGGGAAAG........................................................................................................................................................................................................................................................................................................................2590.11101000
.........................................................................................................................................................................CGGAGCGAGAGCTGCTGAGGTGGG............................................................................................................................................................................................................................................................................................................................2490.11101000
..................................................................................................................................................................................................................................................................................................................................TG------CA--------------------------------------------------ACAACAACAGCAG------------------CAA---CAA---TT-----------G---------C------A.....................................................2890.11100010
...........................................................................................................................................................................GAGCGAGAGCTGCTGAGGTGG.............................................................................................................................................................................................................................................................................................................................2190.11101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---------GCAACAGCAACAGCA--GCAACGAA.............2690.11100010
........................................................................................................................................................................GCGGAGCGAGAGCTGCTGAGGTG..............................................................................................................................................................................................................................................................................................................................2390.11101000
....................................................................................................................................................................AGAGGCGGAGCGAGAGCTGCTGAGG................................................................................................................................................................................................................................................................................................................................25100.10101000
...........................................................................................................................................................................GAGCGAGAGCTGCTGAGG................................................................................................................................................................................................................................................................................................................................18100.10101000
......................................................................................................................................................................AGGCGGAGCGAGAGCTGCTGAGG................................................................................................................................................................................................................................................................................................................................23100.10101000
.......................................................................................................................................................................GGCGGAGCGAGAGCTGCTGAGGT...............................................................................................................................................................................................................................................................................................................................23100.10101000
.........................................................................................................................................................................CGGAGCGAGAGCTGCTGAGGT...............................................................................................................................................................................................................................................................................................................................21100.10100010
..............................................C-------------------GT-------CGGAGAACCAGCAGTGG------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................21100.10101000
.........................................................................................................................................................................CGGAGCGAGAGCTGCTGAGGTGA.............................................................................................................................................................................................................................................................................................................................23100.10101000
..............................................................................................................................GGTCGGAGCAGATGAGGCA---G---CAGG.................................................................................................................................................................................................................................................................................................................................................................24110.09101000
.........................................................................................................................................................................................GAGGTGGGAAAGGGCCCA---------ACAGC....................................................................................................................................................................................................................................................................................................23110.09100010
..........................................................................................................................................................................................AGGTGGGAAAGGGCCCA---------ACAGG....................................................................................................................................................................................................................................................................................................22110.09101000
.............................................................................................................................TGGTCGGAGCAGATGAGGCA---G---CAGGT-------.........................................................................................................................................................................................................................................................................................................................................................26110.09100010
..............................................................................................................................GGTCGGAGCAGATGAGGCA---G---CAGGA-------.........................................................................................................................................................................................................................................................................................................................................................25110.09101000
..........................................................................................................................................................................................AGGTGGGAAAGGGCCCA---------ACAGGAGGA................................................................................................................................................................................................................................................................................................26110.09100100
........................................................................................................................................................................................TGAGGTGGGAAAGGGCCCA---------ACAGGAGT.................................................................................................................................................................................................................................................................................................27110.09100010
............................................................................................................................................................A-------AGAGGCGGAGCGAGAGCTGCTGA..................................................................................................................................................................................................................................................................................................................................24110.09101000
........................................................................................................................................................................................TGAGGTGGGAAAGGGCCCA---------ACAG.....................................................................................................................................................................................................................................................................................................23110.09101000
........................................................................................................................................................................................TGAGGTGGGAAAGGGCCCA---------ACA......................................................................................................................................................................................................................................................................................................22110.09101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------GCAACAGCAACAGCA--GCAACG...............22110.09100010
.................................................................................................................................................................................................AAAGGGCCCA---------ACAGGAGGAGGAGC...........................................................................................................................................................................................................................................................................................24120.08101000
......................................................................................................................................CAGATGAGGCA---G---CAGGA-------AGAG.....................................................................................................................................................................................................................................................................................................................................................21120.08100010
............................................................................................................................GTGGTCGGAGCAGATGAGGCA---G---CA...................................................................................................................................................................................................................................................................................................................................................................24120.08101000
.......................................................................................................................................AGATGAGGCA---G---CAGGA-------AGAGGC...................................................................................................................................................................................................................................................................................................................................................22120.08100100
.......................................................................................................................................AGATGAGGCA---G---CAGGA-------AGAGGA...................................................................................................................................................................................................................................................................................................................................................22120.08101000
......................................................................................................................................CAGATGAGGCA---G---CAGGA-------AGAGC....................................................................................................................................................................................................................................................................................................................................................22120.08101000
.................................................................................................................................CGGAGCAGATGAGGCA---G---CAGG.................................................................................................................................................................................................................................................................................................................................................................21120.08101000
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGGAGCGAGAGC........................................................................................................................................................................................................................................................................................................................................27120.08100100
................................................................................................................................TCGGAGCAGATGAGGCA---G---CAGGA-------.........................................................................................................................................................................................................................................................................................................................................................23120.08100010
................................................................................................................................TCGGAGCAGATGAGGCA---G---CAGGA-------AGA......................................................................................................................................................................................................................................................................................................................................................26120.08100010
..............................................................................................................................................GCA---G---CAGGA-------AGAGGCGGAGCGA............................................................................................................................................................................................................................................................................................................................................22120.08101000
.............................................................................................................................TGGTCGGAGCAGATGAGGCA---G---CAG..................................................................................................................................................................................................................................................................................................................................................................24120.08100010
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGGAGCGAGAG.........................................................................................................................................................................................................................................................................................................................................26120.08101000
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGG.................................................................................................................................................................................................................................................................................................................................................18120.08100010
.............................G---------------AC-------------------GT-------CGGAGAACCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................18120.08101000
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGGAGCG.............................................................................................................................................................................................................................................................................................................................................22120.08100100
................................................................................................................................TCGGAGCAGATGAGGCA---G---CAGGA-------ATTT.....................................................................................................................................................................................................................................................................................................................................................27120.08100010
......................................................................................................................................CAGATGAGGCA---G---CAGGA-------AGAGGCGGA................................................................................................................................................................................................................................................................................................................................................26120.08100010
...................................................................................................................................GAGCAGATGAGGCA---G---CAGGA-------A........................................................................................................................................................................................................................................................................................................................................................21120.08101000
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGGAGCGAG...........................................................................................................................................................................................................................................................................................................................................24120.08101000
....................................................................................................................................................................................................GGGCCCA---------ACAGGAGGAGGAG............................................................................................................................................................................................................................................................................................20120.08101000
....................................................................................................................................AGCAGATGAGGCA---G---CAGGA-------AG.......................................................................................................................................................................................................................................................................................................................................................21120.08100010
...........................................................................................................................................GAGGCA---G---CAGGA-------AGAGGCGG.................................................................................................................................................................................................................................................................................................................................................20120.08101000
.............................................................................................................................................GGCA---G---CAGGA-------AGAGGCGGAG...............................................................................................................................................................................................................................................................................................................................................20120.08101000
..........................................................................................................................................TGAGGCA---G---CAGGA-------AGAGGCGG.................................................................................................................................................................................................................................................................................................................................................21120.08101000
..........................................................................................................................................TGAGGCA---G---CAGGA-------AGAGGCGGAGC..............................................................................................................................................................................................................................................................................................................................................24120.08101000
.......................................................................................................................................AGATGAGGCA---G---CAGGA-------AGAGGCGG.................................................................................................................................................................................................................................................................................................................................................24120.08101000
.......................................................................................................................................AGATGAGGCA---G---CAGGA-------AGAGGCGGAG...............................................................................................................................................................................................................................................................................................................................................26120.08101000
...............................................................................................................................GTCGGAGCAGATGAGGCA---G---CA...................................................................................................................................................................................................................................................................................................................................................................21130.08101000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGC..............................................................................................................................................................................................................................................................................................................................................18130.08101000
.................................................................................................................................................................................................AAAGGGCCCA---------ACAGGAGGAG...............................................................................................................................................................................................................................................................................................20130.08101000
...................................................................................................................................................................................................AGGGCCCA---------ACAGGAGGAGG..............................................................................................................................................................................................................................................................................................19130.08101000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGCGA............................................................................................................................................................................................................................................................................................................................................20130.08101000
................................................................................................................................................A---G---CAGGA-------AGAGGCGGAGCGAGAGCT.......................................................................................................................................................................................................................................................................................................................................25130.08101000
.............................................................................................................................TGGTCGGAGCAGATGAGGTC---T---.....................................................................................................................................................................................................................................................................................................................................................................21140.07101000
............................................................................................................................................................A-------AGAGGCGGAGCGAGAGCT.......................................................................................................................................................................................................................................................................................................................................19140.07101000
................................................................................................................................................................................................................................................................GCAAGAG-------------------------AACGGCTGGCGATGG-C------A------...............................................................................................................................................................................................24150.07101000
......................................................................................................................................................................................................................................GA-------------------AACGGGCAAGAG-------------------------AACGGCTGGCGA.................................................................................................................................................................................................................26150.07101000
................................................................................................................................................................................................................................................................GCAAGAG-------------------------AACGGCTGGCG..................................................................................................................................................................................................................18150.07101000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGGCGAT................................................................................................................................................................................................................23150.07101000
.................................................................................................................................................................................................................................................................CAAGAG-------------------------AACGGCTGGCGATGG-.............................................................................................................................................................................................................21150.07101000
..............................................................................................................................................................................................................................................................GGGCAAGAG-------------------------AACGGCTGGCG..................................................................................................................................................................................................................20150.07101000
.......................................................................................................................................................................................................................................A-------------------AACGGGCAAGAG-------------------------AACGGCTGG....................................................................................................................................................................................................................22150.07101000
.......................................................................................................................................................................................................................................A-------------------AACGGGCAAGAG-------------------------AACGGCTG.....................................................................................................................................................................................................................21150.07101000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGGCC..................................................................................................................................................................................................................21150.07101000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGGCGATG...............................................................................................................................................................................................................24150.07101000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGATGG-A------......................................................................................................................................................................................................27150.07101000
.................................................................................................................................................................................................................................................................CAAGAG-------------------------AACGGCTGGCGATGG-C------A------A..............................................................................................................................................................................................24150.07100100
.......................................................................................................................................................................................................................................A-------------------AACGGGCAAGAG-------------------------AACGGCTGGC...................................................................................................................................................................................................................23150.07101000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGATT...............................................................................................................................................................................................................25150.07101000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGTA...................................................................................................................................................................................................................21150.07100010
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGC.................................................................................................................................................................................................................23150.07101000
................................................................................................................................................................................................................................................................GCAAGAG-------------------------AACGGCTGGCGATGG-C------......................................................................................................................................................................................................23150.07101000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTT.....................................................................................................................................................................................................................19150.07101000
.......................................................................................................................................................................................................................................A-------------------AACGGGCAAGAG-------------------------AACGGCTGGCGA.................................................................................................................................................................................................................25150.07101000
......................................................................................................................................................................................................................................GA-------------------AACGGGCAAGAG-------------------------AACGGCTGG....................................................................................................................................................................................................................23150.07101000
...............................................................................................................................................................................................................................................................GGCAAGAG-------------------------AACGGCTGGCGAT................................................................................................................................................................................................................21150.07101000
............................................................................................................................................................................................................................................................ACGGGCAAGAG-------------------------AACGGCTGGCGAC................................................................................................................................................................................................................24150.07101000
................................................................................................................................................................................................................................................................GCAAGAG-------------------------AACGGCTGGCGATGG-.............................................................................................................................................................................................................22150.07101000
..............................................................................................................................................................................................................................................................GGGCAAGAG-------------------------AACGGCTGGCGA.................................................................................................................................................................................................................21150.07101000
...............................................................................................................................................................................................................................................................GGCAAGAG-------------------------AACGGCTGGC...................................................................................................................................................................................................................18150.07101000
................................................................................................................................................................................................................................................................GCAAGAG-------------------------AACGGCTGGCGATG...............................................................................................................................................................................................................21150.07101000
...................................................................................................................................................................................................................................................................AGAG-------------------------AACGGCTGGCGATGG-.............................................................................................................................................................................................................19150.07100010
..................................................................................................................................................................................................................................................................AAGAG-------------------------AACGGCTGGCGATGG-C------A------...............................................................................................................................................................................................22150.07100100
...................................................................................................................................................................................................................................................................AGAG-------------------------AACGGCTGGCGATGG-C------A------A..............................................................................................................................................................................................22150.07101000
.............................................................................................................................................................................................................................................................CGGGCAAGAG-------------------------AACGGCTGGCGATGG-.............................................................................................................................................................................................................25150.07101000
................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAG------------------CAA---CAA---TT-----------.......................................................................19160.06101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCA---------GCAACAGCAACAGCA--G....................23170.06101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA---------GCAACAGCAACAGCA--GCAAC................24190.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------GCAACAGCAACAGCA--GCA..................19200.05101000
droVir3
GA-------------------------CTGCA-------------------------------GCG-----ACAGCGAAACGCCAACGGC------------------------------------AGCAGCAGCA---G---CT---G---CTGCA-------------------------------------------------------GCAGCGGCGGCG-----------------------------------------------------------GCGGCGACGG----CAGCGG---------------CGACAG---CAGCAGCAGCAGCAGCCGCTCAGCAGCATGCGCGTCATGCATTGCGTGTTGCACAA---------------CAA---CA---GCAGCAGCAACAA------CAAC------A-----------------ACAACA---------GCAGCAGCAGCAGCA--GCAGCAGCAGCGACAGCAGC-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................CA---G---CT---G---CTGCA-------------------------------------------------------GCAGCG...................................................................................................................................................................................................................................................................................................1770.141000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................CGGCG-----------------------------------------------------------GCGGCGACGG----CAG.................................................................................................................................................................................................................1890.111001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CACAA---------------CAA---CA---GCAGCAGCAACA........................................................................................22120.081001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGCAACAA------CAAC------A-----------------A....................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA--GCAGCAGCAGCGA........22200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------ACAACA---------GCAGCAGCAGCAGCA--.....................22200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAA------CAAC------A-----------------ACAACA---------GCAG..................................25200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA------CAAC------A-----------------ACAACA---------GCAGCAGC..............................25200.051000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA---------GCAGCAGCAGCAGCA--GCAGCA...............27200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CAA---------------CAA---CA---GCAGCAGCAACAA------CAAC------A-----------------.....................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AA---------------CAA---CA---GCAGCAGCAACAA------CA...............................................................................22200.051000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CAA---CA---GCAGCAGCAACAA------C................................................................................19200.051000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCAGCAGCAACAA------CAAC------A-----------------ACAAC................................................25200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AG---CAGCAGCAGCAGCAGCCGCT..................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAA------CAAC------A-----------------ACAACA---------GCAGC.................................23200.051000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------A-----------------ACAACA---------GCAGCAGCAGCAGC........................25200.051000000000000000000000000000000000000000000000000000000000001000
droMoj3
GT---------------------ATAAATGCGCCACCT-AATCAAAC-------------------TGTCAACTCGCT----------GC------------------------------------AGCAGCAGCA---G------------CTGCA-ACAGCAACAACA------------------------------------------GCAGCAGCAACAACAGCGAT-------------------TGCAAATGATAAACCATCAGCAA-TTTAATCAGCTGCAGCAG-------CAACTGGCGCAGCAACAACAACAG------C--------------------------------------------------------------------AG---CA---GCAGCAGCAACAACAGCAG--------------CAG------------CAGCA---------GCAGCAACAACAACA--ACAGCAGCAGCAACAGCATCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................CAAATGATAAACCATCAGCA............................................................................................................................................................................................................................................2011.001100000
.................................CACCT-AATCAAAC-------------------TGTCAACTCGCC----------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAG--------------CAG------------CAGC................................................21200.204300010
.................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAG--------------CAG------------CAGCA---------......................................19200.153300000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAGCAACAACAGCAG--------------CA.................................................................22200.153300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA--ACAGCAGCAGCAACA......20200.153300000
.......................................................................................................................................................................................................................................................................................................................GCAACAACAACAG------C--------------------------------------------------------------------AG---CA---GCA.................................................................................................21200.153300000
.........................................................................................................................................................TGCA-ACAGCAACAACA------------------------------------------GCAGCAGCA................................................................................................................................................................................................................................................................................................2570.141010000
...........................................................................................................................................................................................................................................................................................................................CAACAACAG------C--------------------------------------------------------------------AG---CA---GCAGC...............................................................................................19200.102000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACA--ACAGCAGCA............24200.102000002
...........................................................................................................................................................CA-ACAGCAACAACA------------------------------------------GCAGCAGC.................................................................................................................................................................................................................................................................................................22200.102000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACA--ACAGCAG..............22200.102100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------CAG------------CAGCA---------GCAGCAAC..............................20200.102000020
..........................................................................................................................................................GCA-ACAGCAACAACA------------------------------------------GCAGCAGCA................................................................................................................................................................................................................................................................................................24200.102200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACA--ACAGCAGCAGCAACAGC....29120.081000010
.........................................................................................................................................................TGCA-ACAGCAACAACA------------------------------------------GCAGC....................................................................................................................................................................................................................................................................................................21130.081000010
...........................................................................................................................................G------------CTGCA-ACAGCAACAACA------------------------------------------GC.......................................................................................................................................................................................................................................................................................................20150.071000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAG--------------CAG------------CAGCA---------GCAGCAA...............................22200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAG--------------CAG------------CAGCA---------GCAGCA................................28200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................AG---CA---GCAGCAGCAACAACA.....................................................................................19200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAG--------------CAG------------CAGCA---------......................................22200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA--ACAGCAGCAGCAACAGC....23200.051100000
.............................................................................................................................................................................................................................................................................................................................ACAACAG------C--------------------------------------------------------------------AG---CA---GCAGCAGCAACAACA.....................................................................................27200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------GCAGCAACAACAACA--ACAGCAGCAG...........27200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAACA--ACAGCAGCAGC..........25200.051000010
.......................................................................................................................................................................................................................................................................................................................GCAACAACAACAG------C--------------------------------------------------------------------AG---CA---GC..................................................................................................20200.051100000
....................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACAG------C--------------------------------------------------------------------AG---CA---....................................................................................................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA--ACAGCAGCAGCAAC.......20200.051000010
............................................................................................................................................................A-ACAGCAACAACA------------------------------------------GCAGCAGCA................................................................................................................................................................................................................................................................................................22200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------GCAGCAACAACAACA--ACAGCA...............22200.051000010
..........................................................................................................................................................................................................................................................................................................................ACAACAACAG------C--------------------------------------------------------------------AG---CA---GCA.................................................................................................18200.051000100
............................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAG--------------CAG------------CAGCA---------......................................24200.051100000
.........................................................................................................................................................................................................................................................................................................................AACAACAACAG------C--------------------------------------------------------------------AG---CA---GCAGCAGCA...........................................................................................25200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------GCAGCAACAACAACA--ACAGC................23200.051000010
...............................................................................................................................................................................................................................................................................................................................AACAG------C--------------------------------------------------------------------AG---CA---GCAGCAGCAACAACAGC...................................................................................27200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAACA--ACAGCAGCAGCAAC.......28200.051100000
.............................................................................................................................................................................................................................................................................................................................ACAACAG------C--------------------------------------------------------------------AG---CA---GCAGCAGCAACA........................................................................................24200.051000001
..........................................................................................................................................................GCA-ACAGCAACAACA------------------------------------------GCAGCAGC.................................................................................................................................................................................................................................................................................................23200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--ACAGCAGCAGCAACAGC....20200.051000010
droGri2
CCTCATCTG--GGAGCGGCGGGCGCAGTGGCGCTAACACA------CGCTCTGGTCAGCAGCAGCA----------------------GC--------------------------AGCGGC-AGCAGCAGCAGCAGCAGCGGCA----------------GCAG---CAGCAGCAGCAG---------------------CA---------GCAGCAGCGGCAGCAGCA--------------------------------------------------GCAGCGGCAGCAG-------CAGCAGCAGCAGCAGCAGCAGCAG------CA--------------------------------------------------G---------------------CGGCAGCAGCAG---CAGCGGCAG--------------CGG------------CAGCG---------GCAGCAGCAGCAGCA--GCAGCGGCAGCAGCAGCAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................TCAGCAGCAGCA----------------------GC--------------------------AGCG.....................................................................................................................................................................................................................................................................................................................................................................................................18200.10220
......................................................TCAGCAGCAGCA----------------------GC--------------------------AGCGGC-AGC...............................................................................................................................................................................................................................................................................................................................................................................................23160.06110
..........................................................................................................................................................................................................................................................................................................................................CA--------------------------------------------------G---------------------CGGCAGCAGCAG---CAGCGGC...................................................................................22200.05101
droAna3
CTCGATGTG-----------------TCC--------ATA------CTGTCCGGCCACCTACAGCA----------------------GG--ATCGATACGCTGCGTTCGCACCTGCGCGTAAAGCATCCTGACCGCCT-------------GCTGA------------------------------AGCTGAACTCGTC-CATTTAAGGGCGTGGTAGGGGCCAGAGTACA-------------------GCCCACC-ATCG-----------------------CTA-----TTACTA--TCA------G------CAACAT------C--------------------------------------------------------------AACATCAA---CA---GCAACAGCAGCAG------CAACACCGGCA-----------------GCAACA---------GCAACACCAGCAGCA--GCAGCAACAGTCACACCAGC-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................AA---CA---GCAACAGCAGCAG------CAACACCGGC.......................................................................2711.001010000
..............................................................................................................................ATCCTGACCGCCT-------------GCTGA------------------------------AGC...............................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................G--ATCGATACGCTGCGTTCGCAC............................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................CGCGTAAAGCATCCTGACCGCCT-------------GCT..................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..............................................................AGCA----------------------GG--ATCGATACGCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................................ACCTGCGCGTAAAGCATCCC..........................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................................................................................................................GCGCGTAAAGCATCCTGACCGCCT-------------GC...................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................................................................................................................................................AT------C--------------------------------------------------------------AACATCAA---CA---GCAACAGC............................................................................................2120.501010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------GCAACA---------GCAACACCAGCAGC........................21120.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAG------CAACAC...........................................................................19140.071010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACACCAGCAGCA--GCAGCA...............20200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................AA---CA---GCAACAGCAGCAG------CAACA............................................................................22200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACACCAGCAGCA--GCAGC................20200.051001000
................................................................................................................................................................................................................................................................................................................................................................................................................A---CA---GCAACAGCAGCAG------CAAC.............................................................................20200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................AA---CA---GCAACAGCAGCAG------CAAC.............................................................................21200.051100000
droBip1
A-------------------------------------------------------------------------------------------------------------------GGCGGAAAACAGCCTAAGCACAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCCGTAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGACGGCGTCAACGTACGACGACGG---------------CAACAG------C--------------------------------------------------------------AACAGCAA---CA---GCAGCGGCAGCGG------CAGC------G---------C--------CAGCAG-TACAACAGTAACATC---AGCTGCGCAGCAACAGCGACGCTGACASizeHit CountTotal NormTotal
No Reads
droKik1
AA-------------------------GTGCGCAACTCTAGTCGCAT-------------------TCGCAACCTTGT----------GG--------------------------AGCTGAAGGCACGCCAGGAGGAAGAGC-----G---CCAGCGAAGGGAG---CGCGAGAATCTG------------------------------------TATCAGGAGCGGCAGAACGCACACTGGCTGGCACCGCCCACGCA---------------------------------------ACAG---------------CAGCAATATCAGCAGC-----------------------------------------------------------AG---CAGCAAC---------AG---CAG------CAGC------A--GCAG------------CAACA---------ACAGCAGCAACAGCA--ACAACAACAGCAGCGCACACGSizeHit CountTotal NormTotal
No Reads
droFic1
TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCAGAAG---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------CA--------------------------------------------------GCGGCAGCAGCAA------------------------CAA------CAAC------A--G------C------AGCAACA---------GCAACAGCCAGAGCAGTGCTGCTACTGCGACGCCGGCASizeHit CountTotal NormTotal
No Reads
droEle1
TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCTGCGGCAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------C--------------------------------------------------------------AACAGCAA---CA---GCAGCAGCAACAA------CAAC------A---------G------CACAGCA---------GCAACAGCCCAAGCAGCGCTGCAACTGCGTCGCCGGCASizeHit CountTotal NormTotal
No Reads
droRho1
TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGCCAGCGGCAGA-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAACAG------C--------------------------------------------------------------AACAACA----CA---GCAGCAGCAACAA------CAAA------ACAGCAGCAGCAGCAGCAGCAACA---------GCAACAGCCCGAGCAGCGCTGCAACTGCGACGCCGGCASizeHit CountTotal NormTotal
No Reads
droBia1
TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGATGG-A------G------CAGCAG------A--------------------------------------------------------------GGCAGCAG---CA---GCAGCAGCAACAA------CAAC------A---------C--------CGGCA---------GCAACAGCCCCAGCAGCGCTGCCACAGCGACGCCGGCTSizeHit CountTotal NormTotal
No Reads
droTak1
TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGCCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AACAGCAA---CA---GCAACAGCAACAA------CAAC------A------------------CAACA---------GCAACAGCCCGAGCAGCGCTGCAGCTGCGACGTCGGCASizeHit CountTotal NormTotal
No Reads
droEug1
TA--------------------------------------------------------------------------------------GA--------------------------AGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------CA--------------------------------------------------GCAGCAACAGCAA------------------------TAA------CAAC------C---------C------AGCAACA---------GCAACAGTAAAAGCTGCGCTGCAACTGCGAAGCCAGCASizeHit CountTotal NormTotal
No Reads
dm3
TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------C------AGCAACA---------GCAACAGTACAAGCAGTGCTGCTGCTGCGACGCCAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAAC------A---------C------AGCAACA---------GCAACA................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGAAGTCCCA---G---GCGGA-------------------------------------------------------AAA......................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................GCGGCATG-------------------GCCCACCCATAGGTC...................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------C------AGCAACA---------GCAACAGTACAAGCAGTGCTGCGACTGCGACGCCGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................ACGTACTGCGACGG---------------CA.............................................................................................................................................................................................1611.00100000010000000000
droSec2
TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------C------AGCAACA---------GCAACAGTACAAGCAGTGCTGCGACTGCGACGCCGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TCTGGT-----------------CCAGTCGTGCCACTC--------------------------------------AAAGCCCCAACAGC--------------------------AGCAG-CAACAACTCAAGGAAATTGTC-----G---CCG--------------T------CGAGCGGCAAACACGCCAAAGT----T---------GCCGCGAGTGCAAGTGCAAG----------------------------TATGTCTTTGTGCCCCATCAGCAGCAGCAACA-ACAGCAGCAG---------------CAGCAACAACAGCAGC-----------------------------------------------------------AG---------------CAACAA---CAG------CAAC-----------------------AACAACAGCT------ACAACAGCAACAGCA--GCAGCAACAGCAGTAGCAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................G---------------CAGCAACAACAGCAGC-----------------------------------------------------------AG---------------C..................................................................................................20200.15303000000000
...........................................................................................................................................................................................................................................................................................GCAGCAACA-ACAGCAGCAG---------------CA.............................................................................................................................................................................................21200.10202000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCA--GCAGCAACAGCA.........25190.05101000000000
.................................................................................................................................................................................................................................................................................................ACA-ACAGCAGCAG---------------CAGCAACAAC.....................................................................................................................................................................................23200.05100100000000
.............................................................................................................................................................................................................................................................................................AGCAACA-ACAGCAGCAG---------------CAGC...........................................................................................................................................................................................21200.05100100000000
..............................................................................................................................................................................................................................................................................................................G---------------CAGCAACAACAGCAGC-----------------------------------------------------------AG---------------CAACA..............................................................................................24200.05101000000000
..........................................................................................................................................................................................................................................................................................AGCAGCAACA-ACAGCAGCAG---------------C..............................................................................................................................................................................................21200.05101000000000
........................................................................................................................................................................................................................................................................................................GCAGCAG---------------CAGCAACAACAGCAGC-----------------------------------------------------------....................................................................................................................23200.05100100000000
................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGC-----------------------------------------------------------AG---------------CAA................................................................................................19200.05101000000000
..............................................................................................................................................................................................................................................................................................................G---------------CAGCAACAACAGCAGC-----------------------------------------------------------AG---------------CAAC...............................................................................................23200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCA--GCAGCAACAGCA.........20200.05101000000000
droEre2
TA--------------------------------------------------------------------------------------GA--------------------------GGCGGAAAACAGCCTAAGCAGAAGTCCCA---G---GCGGA-------------------------------------------------------AAAGTGGGGGCAGCGGCATG-------------------GCCCACCCATAGGTCATTGGTCTTTTTCGTCGGCGTCAACGTACTGCGACGG---------------CAGCAG------C--------------------------------------------------------------AA------------------------CAA------CAAC------A---------CAGCAACAGCAACA---------GCAACAGTACAAGCAGTGCTGCAACTGCGACGCCGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACA---------GCAACAGT..............................21120.0810001000

Generated: 05/17/2015 at 11:54 PM