ID:

dps_1038

 Coordinate:

3:5695095-5695116 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intron [Dpse\tRNA:GA29563-in]; exon [Dpse\tRNA:GA29563:2]; exon [Dpse\tRNA:GA29563:1]; tRNA [Dpse\tRNA:GA29563-RA]

No Repeatable elements found

Sense Strand Reads

-------------#####################################----------------------####################################--------------
CTCCCGCTCGTAGCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGCGATTGACAGAAAAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCATAATTTTTTCT
**************************************************......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 SRR902012
CNS imaginal disc
 M062
head
 GSM343916
embryo
 SRR902011
testis
 SRR902010
ovaries
 GSM444067
head
 M022
male body
.........................................................................................TCAAATCCGGCTCGAAGGACCA........... 22 1 1 1191.00 1191 930 206 13 0 23 4 0 1 13 1
.......................................................................................GTTCAAATCCGGCTCGAAGGACCA........... 24 1 1 1184.00 1184 640 474 42 0 12 3 0 0 13 0
....................................................................................CTGGTTCAAATCCGGCTCGAAGGACCA........... 27 1 1 879.00 879 684 33 111 0 32 6 1 1 7 4
..................................................................................CGCTGGTTCAAATCCGGCTCGAAGGACCA........... 29 1 1 655.00 655 27 331 214 0 55 1 2 3 8 14
........................................................................................TTCAAATCCGGCTCGAAGGACCA........... 23 1 1 603.00 603 420 115 47 0 10 3 0 0 6 2
..................................................AGCGATTGACAGAAAAGTAGAC.................................................. 22 0 1 598.00 598 216 7 60 3 1 12 177 118 0 4
.....................................................................................TGGTTCAAATCCGGCTCGAAGGACCA........... 26 1 1 560.00 560 461 36 36 0 13 7 1 1 5 0
......................................................................................GGTTCAAATCCGGCTCGAAGGACCA........... 25 1 1 311.00 311 257 8 26 0 17 0 0 0 0 3
....................................................................................CTGGTTCATATCCGGCTCGAAGGACCA........... 27 2 1 221.00 221 145 5 51 0 9 0 2 1 4 4
.......................................................................................GTTCATATCCGGCTCGAAGGACCA........... 24 2 1 199.00 199 132 49 12 0 1 0 0 0 5 0
....................................GCGGTGGACTGTAGATC..................................................................... 17 1 4 193.50 774 0 0 0 771 0 0 3 0 0 0
.................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGACCA........... 30 1 1 189.00 189 0 189 0 0 0 0 0 0 0 0
.......................................................................................GTTCAAATCCGGCTCGAAG................ 19 0 9 152.33 1371 1096 167 39 2 4 61 0 0 2 0
.....................................................................................TGGTTCATATCCGGCTCGAAGGACCA........... 26 2 1 142.00 142 116 4 15 0 3 1 1 1 1 0
....................................................................................CTGGTTCAGATCCGGCTCGAAGGACCA........... 27 2 1 137.00 137 73 6 36 0 11 0 2 0 1 8
.............CCTTCGATAGCTCAGTTGGTAGAGC.................................................................................... 25 0 9 136.78 1231 393 65 470 4 27 240 1 10 21 0
..................................................................................CGCTGGTTCATATCCGGCTCGAAGGACCA........... 29 2 1 134.00 134 3 40 71 0 12 0 0 0 1 7
...................................................................................GCTGGTTCAAATCCGGCTCGAAGGACCA........... 28 1 1 117.00 117 93 2 11 0 10 0 0 0 1 0
..................................................................................CGCTGGTTCAGATCCGGCTCGAAGGACCA........... 29 2 1 116.00 116 0 45 57 0 9 0 3 0 0 2
..........................................................................................CAAATCCGGCTCGAAGGACCA........... 21 1 4 111.50 446 278 121 9 0 17 1 2 0 18 0
.........................................................................................TCATATCCGGCTCGAAGGACCA........... 22 2 2 110.00 220 171 29 3 1 2 0 3 6 4 1
.......................................................................................GTTCAGATCCGGCTCGAAGGACCA........... 24 2 1 105.00 105 56 32 8 0 5 0 0 0 2 2
........................................................................................TTCATATCCGGCTCGAAGGACCA........... 23 2 1 98.00 98 60 11 13 1 3 2 0 3 4 1
......................................................................................GGTTCATATCCGGCTCGAAGGACCA........... 25 2 1 87.00 87 57 0 13 0 12 0 2 0 1 2
.....................................................................................TGGTTCAGATCCGGCTCGAAGGACCA........... 26 2 1 65.00 65 45 6 8 0 4 0 0 0 1 1
............................................................................ATAGGTCGCTGGTTCAAATCCGG....................... 23 0 9 59.67 537 275 2 140 0 5 115 0 0 0 0
........................................................................................TTCAGATCCGGCTCGAAGGACCA........... 23 2 1 59.00 59 25 17 9 0 2 0 0 4 1 1
.............CCTTCGATAGCTCAGTTGGTAGA...................................................................................... 23 0 9 57.22 515 154 27 135 32 0 152 7 0 8 0
...........................................................................CATAGGTCGCTGGTTCAAATCCGG....................... 24 0 9 54.56 491 371 0 91 0 15 14 0 0 0 0
....................................GCGGTGGACTGTAGATCC.................................................................... 18 2 8 47.50 380 6 1 1 366 0 0 6 0 0 0
..................................................................................CTCTGGTTCAAATCCGGCTCGAAGGACCA........... 29 2 1 47.00 47 0 0 38 0 9 0 0 0 0 0
...................................AGCTGTGGACTGTAGATC..................................................................... 18 2 10 43.20 432 1 3 0 370 0 0 31 27 0 0
...................................................................................GCTGGTTCATATCCGGCTCGAAGGACCA........... 28 2 1 43.00 43 30 1 6 0 6 0 0 0 0 0
..............................................................................AGGTCGCTGGTTCAAATCCGG....................... 21 0 9 42.00 378 181 2 90 0 2 103 0 0 0 0
..................................................AGCGATTGACAGAAAAGTAGACCTCT.............................................. 26 2 1 41.00 41 0 0 0 0 0 0 0 41 0 0
....................................................................................CTGGTTCAAATCCGGCTCGAAGGACC............ 26 1 1 41.00 41 10 1 22 0 8 0 0 0 0 0
.......................................................................................GTTCAAATCCGGCTCGAA................. 18 0 9 39.22 353 288 18 14 0 0 30 0 0 3 0
......................................................................................GGTTCAGATCCGGCTCGAAGGACCA........... 25 2 1 39.00 39 23 4 6 0 3 0 0 0 0 3
............................................................................ATAGGTCGCTGGTTCAAATCC......................... 21 0 9 33.89 305 142 2 108 0 13 37 1 0 2 0
.............CCTTCGATAGCTCAGTTGG.......................................................................................... 19 0 9 33.89 305 227 14 5 1 0 46 4 2 6 0
.......................................................................................GTTCATATCCGGCTCGAAG................ 19 1 10 32.60 326 245 28 26 15 1 8 0 0 3 0
............................................................................ATAGGTCGCTGGTTCATATCCGG....................... 23 1 9 27.44 247 69 0 154 0 9 15 0 0 0 0
...................................AGCGGTGGACTGTAGATC..................................................................... 18 1 4 25.75 103 0 1 0 92 0 0 7 3 0 0
...........................................................................CATAGGTCGCTGGTTCAAATCC......................... 22 0 9 24.78 223 106 9 80 0 7 19 0 0 2 0
...................ATAGCTCAGTTGGTAGAGCGGTGGA.............................................................................. 25 0 9 23.00 207 85 64 4 1 1 31 7 5 9 0
.................................................................................TCGCTGGTTCAGATCCGGCTCGAAGGACCA........... 30 2 1 23.00 23 0 22 0 0 0 0 1 0 0 0
.........................................................................................TCAAATCCGGCTCGAAGGACC............ 21 1 1 22.00 22 17 2 2 0 1 0 0 0 0 0
...................................................GCGATTGACAGAAAAGTAGAC.................................................. 21 0 1 22.00 22 21 0 1 0 0 0 0 0 0 0
..............................................................................GGGTCGCTGGTTCGACTCCGG....................... 21 3 14 20.86 292 292 0 0 0 0 0 0 0 0 0
.......................................................................................GTTCAGATCCGGCTCGAAG................ 19 1 9 20.67 186 118 34 26 4 1 2 0 0 0 1
...........................................................................CATAGGTCGCTGGTTCATATCCGG....................... 24 1 9 20.11 181 87 0 80 0 11 3 0 0 0 0
.......................................................................................GTTCAAATCCGGCTCGAAGGACC............ 23 1 1 20.00 20 14 2 2 0 2 0 0 0 0 0
..................................................................................CTCTGGTTCATATCCGGCTCGAAGGACCA........... 29 3 1 20.00 20 0 0 17 0 3 0 0 0 0 0
........................................................................ATCCATAGGTCGCTGGTTCAAATCCGG....................... 27 0 9 19.44 175 92 2 68 0 3 10 0 0 0 0
.................................................................................TCGCTGGTTCATATCCGGCTCGAAGGACCA........... 30 2 1 19.00 19 0 18 0 0 0 0 1 0 0 0
....................................................................................CGGGTTCAAATCCGGCTCGAAGGACCA........... 27 2 1 19.00 19 0 0 16 0 3 0 0 0 0 0
...................................................................................GCTGGTTCAGATCCGGCTCGAAGGACCA........... 28 2 1 19.00 19 13 0 3 0 3 0 0 0 0 0
..................................................AGCGATTGACAGAAAAGTAGA................................................... 21 0 1 19.00 19 6 1 1 2 0 1 3 5 0 0
..............................................................................AGGTCGCTGGTTCAAATCC......................... 19 0 9 18.89 170 119 0 38 0 2 11 0 0 0 0
.............CCTTCGATAGCTCAGTTGGTAG....................................................................................... 22 0 9 18.56 167 35 3 12 2 0 111 2 0 2 0
............................................................................ATAGGTCGCTGGTTCAGATCCGG....................... 23 1 9 17.11 154 26 0 111 0 5 11 0 0 1 0
...............................................................................GGTCGCTGGTTCAAATCC......................... 18 0 9 16.89 152 119 0 19 0 2 12 0 0 0 0
.....................................CGGTGGACTGTAGATC..................................................................... 16 1 4 16.75 67 0 0 0 63 0 0 1 3 0 0
.............CCTTCGATAGCTCAGTTGGTAGAG..................................................................................... 24 0 9 16.67 150 82 2 33 0 2 28 2 0 1 0
........................................................................................TTCAAATCCGGCTCGAAGGACC............ 22 1 1 16.00 16 13 0 0 0 3 0 0 0 0 0
..................................................................................CGCTGGTTCAAATCCGGCTCGAAGGACC............ 28 1 1 16.00 16 3 0 7 0 5 0 0 0 0 1
...............................................................................GGTCGCTGGTTCAAATCCGG....................... 20 0 9 15.67 141 77 0 13 0 0 51 0 0 0 0
..............................................................................AGGTCGCTGGTTCATATCCGG....................... 21 1 9 15.00 135 41 1 68 0 2 22 0 0 1 0
..........................AGTTGGTAGAGCGCTTGACT............................................................................ 20 2 9 14.78 133 72 53 0 0 0 0 0 0 2 6
...................................AGCGGTGGACTGTAGATCC.................................................................... 19 2 4 14.50 58 2 2 1 46 0 0 4 3 0 0
...................................................................................GCTGGTTCAAATCCGGCTCGAAGGACC............ 27 1 1 14.00 14 13 0 1 0 0 0 0 0 0 0
.....................................................................................TTGTTCAAATCCGGCTCGAAGGACCA........... 26 2 1 14.00 14 0 0 11 0 3 0 0 0 0 0
.............CCTTCGATAGCTCAGTTG........................................................................................... 18 0 9 13.56 122 80 2 0 0 0 31 2 0 7 0
...............................................................................GGTCGCTGGTTCGACTCCGGCTTG................... 24 3 9 13.44 121 121 0 0 0 0 0 0 0 0 0
..................................................AGCGATTGACAGAAAAGTAGACA................................................. 23 0 1 13.00 13 11 0 0 0 0 0 1 1 0 0
......................................................................................GTTTCAAATCCGGCTCGAAGGACCA........... 25 2 1 13.00 13 0 0 9 0 4 0 0 0 0 0
..................................................ATCGATTGACAGAAAAGTAGAC.................................................. 22 1 1 13.00 13 0 0 13 0 0 0 0 0 0 0
.............................................................................TAGGTCGCTGGTTCAAATCCGG....................... 22 0 9 12.67 114 49 1 31 0 0 33 0 0 0 0
...............................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG................ 27 0 9 12.67 114 106 0 7 0 1 0 0 0 0 0
.............CCTTCGATAGCTCAGTTGGTAGAGCGGTG................................................................................ 29 0 9 12.33 111 0 22 39 0 4 46 0 0 0 0
.......................................................................................GGTCAAATCCGGCTCGAAGGACCA........... 24 2 1 12.00 12 0 0 5 0 7 0 0 0 0 0
........................................................................ATCCATAGGTCGCTGGTTCATATCCGG....................... 27 1 9 11.67 105 26 0 74 0 3 2 0 0 0 0
........................................................................................TTCAAATCCGGCTCGAAG................ 18 0 9 11.56 104 94 1 0 0 0 9 0 0 0 0
.................CGATAGCTCAGTTGGTAGA...................................................................................... 19 0 9 11.44 103 20 6 3 3 0 69 0 0 2 0
..............................................................................GGGTCGCTGGTTCGACTCCGGC...................... 22 3 10 11.40 114 113 0 0 0 1 0 0 0 0 0
.................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGACC............ 29 1 1 11.00 11 0 0 5 0 5 0 0 0 0 1
..................................................................................CTCTGGTTCAGATCCGGCTCGAAGGACCA........... 29 3 1 10.00 10 0 0 6 0 4 0 0 0 0 0
..................GATAGCTCAGTTGGTAGA...................................................................................... 18 0 9 9.89 89 16 0 0 4 0 69 0 0 0 0
...........................................................................CATAGGTCGCTGGTTCAGATCCGG....................... 24 1 9 9.67 87 36 0 47 0 3 1 0 0 0 0
........................................................................ATCCATAGGTCGCTGGTTC............................... 19 0 9 9.56 86 62 0 13 0 1 8 0 0 2 0
............................................................................ATAGGTCGCTGGTTCATATCC......................... 21 1 9 9.22 83 22 0 55 0 3 3 0 0 0 0
...............................................................................GGTCGCTGGTTCGACTCCGG....................... 20 2 10 9.20 92 92 0 0 0 0 0 0 0 0 0
........................................................................ATCCATAGGTCGCTGGTTCA.............................. 20 0 9 9.11 82 75 0 1 0 0 3 0 0 3 0
....................................................................................CTGGTTCATATCCGGCTCGAAGGACC............ 26 2 1 9.00 9 2 0 5 0 2 0 0 0 0 0
...............TTCGATAGCTCAGTTGGTAGA...................................................................................... 21 0 9 9.00 81 16 6 12 6 0 39 0 0 1 1
..................................................................................CGATGGTTCAAATCCGGCTCGAAGGACCA........... 29 2 1 9.00 9 0 0 8 0 1 0 0 0 0 0
.............GCTCCGATAGCTCATTTGGTAGA...................................................................................... 23 3 9 8.89 80 80 0 0 0 0 0 0 0 0 0
..............................................................................AGGTCGATGGTTCAAGTC.......................... 18 2 11 8.82 97 94 2 0 0 0 0 0 0 1 0
...............................................................................GGTCGCTGGTTCAAATCCGGCTCG................... 24 0 9 8.44 76 75 0 1 0 0 0 0 0 0 0
............................................................................ATAGGTCGCTGGTTCAGATCC......................... 21 1 9 8.44 76 8 1 64 0 3 0 0 0 0 0
..................................GAGCTGTGGACTGTAGATC..................................................................... 19 2 6 8.00 48 1 4 0 21 0 0 12 10 0 0
.....................................................................................TGGTTCAAATCCGGCTCGAAGGACC............ 25 1 1 8.00 8 5 0 1 0 2 0 0 0 0 0
..................................................AGAGATTGACAGAAAAGTAGAC.................................................. 22 1 1 8.00 8 0 0 8 0 0 0 0 0 0 0
.................GCATAGCTCAGTTGGTAGA...................................................................................... 19 2 10 8.00 80 76 1 0 0 0 2 0 0 1 0
.............CCTTCGATAGCTCAGTTGGT......................................................................................... 20 0 9 7.89 71 21 4 7 0 0 36 2 0 1 0
........................................................................ATCCATAGGTCGCTGGTTCAGATCCGG....................... 27 1 9 7.56 68 11 1 51 0 2 3 0 0 0 0
.............CCTTCGATAGCTCAGTTGGCAGAGC.................................................................................... 25 1 9 7.44 67 12 10 36 1 5 1 2 0 0 0
..............CTTCGATAGCTCAGTTGGTAGAGC.................................................................................... 24 0 9 7.44 67 53 0 10 0 1 3 0 0 0 0
..............................................................................AGGTCGCTGGTTCAGATCCGG....................... 21 1 9 7.22 65 20 1 34 0 3 7 0 0 0 0
...........................................................................CATAGGTCGCTGGTTCATATCC......................... 22 1 9 7.11 64 10 0 48 2 1 3 0 0 0 0
.............................................................................TGGGTCGCTGGTTCGACTCCGG....................... 22 3 10 7.10 71 71 0 0 0 0 0 0 0 0 0
...............................GTAGAGCGGTGGACTGTAGAGC..................................................................... 22 0 1 7.00 7 0 0 0 7 0 0 0 0 0 0
......................................................................................GGTTCAAATCCGGCTCGAAGGACC............ 24 1 1 7.00 7 4 0 2 0 1 0 0 0 0 0
..............................................................................AGGTCGATGGTTCAAGTCC......................... 19 2 9 7.00 63 56 4 0 0 1 1 0 0 0 1
...............GCCGGTAGCTCAGTTGGTAGA...................................................................................... 21 3 14 7.00 98 97 1 0 0 0 0 0 0 0 0
....................................................................................CTGGTTCGACTCCGGCTCGAAGGACCA........... 27 3 1 7.00 7 6 0 0 0 0 1 0 0 0 0
...................................................................TGTAGATCCATAGGTCGCTGGT................................. 22 3 5 7.00 35 27 4 2 0 0 0 0 0 2 0
.........................CAGTTGGTAGAGCGCTTGACT............................................................................ 21 2 9 6.89 62 49 6 1 0 1 0 0 0 4 1
.......................................................................................GTTCAAATCCGGCTCGAAGG............... 20 0 9 6.89 62 57 2 3 0 0 0 0 0 0 0
...................ATAGCTCAGTTGGTAGAG..................................................................................... 18 0 9 6.67 60 56 1 0 0 0 0 0 0 0 3
.................CGTTAGCTCAGTTGGTAGA...................................................................................... 19 1 9 6.67 60 54 6 0 0 0 0 0 0 0 0
...............................................................................GGTCGCTGGTTCAAATCCGGCT..................... 22 0 9 6.56 59 55 0 1 0 2 1 0 0 0 0
............................TTGGTAGAGCTGTGGACTGTAGATC..................................................................... 25 2 4 6.50 26 0 0 0 11 0 0 15 0 0 0
...................ATAGCTCAGTTGGTAGAGC.................................................................................... 19 0 9 6.44 58 44 3 0 0 0 3 0 0 8 0
.............................................................................TAGGTCGCTGGTTCAAATCC......................... 20 0 9 6.44 58 22 3 27 0 2 4 0 0 0 0
.............CCTTCGATAGCTCAGTTGGTA........................................................................................ 21 0 9 6.33 57 31 2 9 0 0 13 0 0 2 0
...............................................................................GGTCGCTGGTTCAAATCCGGCTC.................... 23 0 9 6.22 56 46 0 6 0 4 0 0 0 0 0
.......................................................................................GTTCATATCCGGCTCGAA................. 18 1 10 6.10 61 51 2 6 0 0 2 0 0 0 0
......................................................................................GTTTCATATCCGGCTCGAAGGACCA........... 25 3 1 6.00 6 0 0 3 0 3 0 0 0 0 0
...............TTCGATAGCTCAGTTGGTAG....................................................................................... 20 0 9 5.89 53 2 0 2 0 0 47 0 0 2 0
...............GCCGGTAGCTCAGTTGGTAGAGC.................................................................................... 23 3 14 5.50 77 69 3 0 0 3 0 0 0 2 0
...............TTCGATAGCTCAGTTGGTAGAG..................................................................................... 22 0 9 5.33 48 6 0 7 0 0 35 0 0 0 0
...........................GTTGGTAGAGCGCTTGACT............................................................................ 19 2 9 5.33 48 28 15 0 1 0 0 0 0 1 3
..........................AGTTGGTAGAGCGCTTGAC............................................................................. 19 2 11 5.27 58 48 7 0 0 0 0 0 0 1 2
...................................AGCAGTGGACTGTAGATC..................................................................... 18 2 12 5.25 63 0 0 0 51 0 0 7 5 0 0
..............................................................................AGGTCGCTGGTTCAAATCCGGCT..................... 23 0 9 5.22 47 40 0 4 0 3 0 0 0 0 0
.........................................................................TCCATAGGTCGCTGGTTCAAATCCGG....................... 26 0 9 5.00 45 24 0 18 0 0 3 0 0 0 0
....................................................................................CTGGTTCAGATCCGGCTCGAAGGACC............ 26 2 1 5.00 5 0 0 4 0 1 0 0 0 0 0
.....................................................................................TTGTTCATATCCGGCTCGAAGGACCA........... 26 3 1 5.00 5 0 0 4 0 1 0 0 0 0 0
........................................................................ATCCATAGGTCGCTGGTTCAAATCC......................... 25 0 9 5.00 45 19 0 25 0 1 0 0 0 0 0
......................................................................................GGTTCAAATCCGGCTCGAAGGACCG........... 25 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
..................................................AGCGATTGACAGAAAAGTAG.................................................... 20 0 1 5.00 5 2 0 0 0 0 1 2 0 0 0
.............CCTTCGATAGCTCAGTTGGTAGAGCGGT................................................................................. 28 0 9 5.00 45 11 12 15 0 0 7 0 0 0 0
......................................................................................TGTTCAAATCCGGCTCGAAGGACCA........... 25 2 1 5.00 5 2 1 0 0 1 0 0 0 1 0
....................................................CGATTGACAGAAAAGTAGACAG................................................ 22 1 1 5.00 5 1 0 0 0 0 0 1 2 1 0
.....................................................GATTGACAGAAAAGTAGACAGC............................................... 22 1 1 5.00 5 4 0 1 0 0 0 0 0 0 0
.....................................................................................TGGTTCATATCCGGCTCGAAGGACC............ 25 2 1 5.00 5 3 0 1 0 1 0 0 0 0 0
..................................................................................CGCTGGTTCGACTCCGGCTTG................... 21 3 13 4.92 64 64 0 0 0 0 0 0 0 0 0
...............................................................................GGTCGCTGGTTCATATCCGG....................... 20 1 9 4.78 43 22 0 12 0 1 7 0 0 1 0
...........................................................................CATAGGTCGCTGGTTCAGATCC......................... 22 1 9 4.78 43 8 1 34 0 0 0 0 0 0 0
.............................................................................TAGGTCGCTGGTTCATATCCGG....................... 22 1 9 4.78 43 12 1 26 0 0 3 1 0 0 0
.......................................................................................GTTCAGATCCGGCTCGAA................. 18 1 9 4.67 42 30 0 8 2 1 1 0 0 0 0
.............................................................................GAGGTCGATGGTTCAAGTCC......................... 20 3 15 4.67 70 64 2 0 0 3 1 0 0 0 0
.........................................................................................TCAGATCCGGCTCGAAGGACCA........... 22 2 20 4.60 92 61 24 4 0 2 0 1 0 0 0
..........................................................................................CAAATCCGGCTCGAAGGACC............ 20 1 4 4.50 18 10 1 2 0 2 1 0 0 0 2
.............................................................................GAGGTCGATGGTTCAAGTC.......................... 19 3 20 4.35 87 78 6 0 0 0 0 0 0 0 3
.....................................................................................TGGTTCAAATCCGGCTCGAAG................ 21 0 9 4.22 38 21 10 3 0 0 4 0 0 0 0
.........................CAGTTGGTAGAGCGCCGG............................................................................... 18 2 13 4.15 54 54 0 0 0 0 0 0 0 0 0
..........................AGTTGGTAGAGCGCTTGACTGTT......................................................................... 23 3 9 4.11 37 20 15 0 1 0 0 0 0 0 1
..............................................................................AGGTCGCTGGTTCAAATCCGGCTC.................... 24 0 9 4.00 36 22 0 6 0 7 1 0 0 0 0
........................................................................................TTCATATCCGGCTCGAAGGACC............ 22 2 1 4.00 4 1 1 2 0 0 0 0 0 0 0
....................................................................................CTGGTTCAAATCCGGCTCGAAGGACCG........... 27 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.................GAATAGCTCAGTTGGTAGA...................................................................................... 19 2 18 4.00 72 69 3 0 0 0 0 0 0 0 0
....................................................................................CGGGTTCAGATCCGGCTCGAAGGACCA........... 27 3 1 4.00 4 0 0 4 0 0 0 0 0 0 0
........................................................................................TTCACATCCGGCTCGAAGGACCA........... 23 2 1 4.00 4 1 2 1 0 0 0 0 0 0 0
...................................................................TGTAGATCCATAGGTCGCTGGTTC............................... 24 3 5 4.00 20 15 0 2 0 0 0 0 3 0 0
..................................................................................CTATGGTTCAAATCCGGCTCGAAGGACCA........... 29 3 1 4.00 4 0 0 3 0 1 0 0 0 0 0
...................ATAGCTCAGTTGGTAGAGCAGC................................................................................. 22 2 9 4.00 36 17 17 0 0 0 0 0 0 2 0
.................................................................................CCGCTGGTTCAAATCCGGCTCGAAGGACCA........... 30 2 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.......................................................................................GTTCATATCCGGCTCGAAGGACC............ 23 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TTGTTCAGATCCGGCTCGAAGGACCA........... 26 3 1 4.00 4 0 0 3 0 1 0 0 0 0 0
....................................................................................CGGGTTCATATCCGGCTCGAAGGACCA........... 27 3 1 4.00 4 0 0 3 0 1 0 0 0 0 0
..................................................................................CGCTGGTTCATATCCGGCTCGAAGGACC............ 28 2 1 4.00 4 0 0 3 0 1 0 0 0 0 0
..................GTTAGCTCAGTTGGTAGAG..................................................................................... 19 1 9 3.89 35 26 8 0 0 0 0 0 0 1 0
............................................................................ATAGGTCGCTGGTTCAAATCCGGC...................... 24 0 9 3.89 35 13 0 14 2 1 3 1 0 0 1
...............................................................................GGTCGCTGGTTCATATCCGGCTCGAAG................ 27 1 9 3.89 35 29 0 3 0 3 0 0 0 0 0
.........................CAGTTGGTAGAGCGCTTGA.............................................................................. 19 2 10 3.80 38 29 6 0 1 0 0 0 0 2 0
.............CCTTCGATAGCTCAGTTGGTAGAGCTGT................................................................................. 28 1 9 3.78 34 23 11 0 0 0 0 0 0 0 0
...........................................................................CATAGGTCGCTGGTTCAAATCCGGC...................... 25 0 9 3.78 34 21 0 10 0 3 0 0 0 0 0
..................GTTAGCTCAGTTGGTAGA...................................................................................... 18 1 9 3.78 34 32 0 0 0 0 1 0 0 1 0
......................................GGTGGACTGTAGATC..................................................................... 15 1 8 3.75 30 0 0 0 25 0 0 4 1 0 0
.............................................................................TTGGTCGGCGGTTCAAATCC......................... 20 3 13 3.69 48 31 12 0 0 0 0 0 0 0 5
..................CATAGCTCAGTTGGTAGA...................................................................................... 18 1 9 3.67 33 23 0 0 3 0 1 0 0 4 2
...............................................................................GGTCGCTGGTTCGACTCCGGC...................... 21 2 9 3.56 32 32 0 0 0 0 0 0 0 0 0
..........................AGTTGGTAGAGCTGTGGACTGTA......................................................................... 23 1 9 3.56 32 0 0 1 15 0 0 15 1 0 0
...............TTCGATAGCTCAGTTGGTAGAGC.................................................................................... 23 0 9 3.56 32 11 0 17 0 1 2 0 0 1 0
..............................................................................AGGTCGCTGGTTCATATCC......................... 19 1 9 3.56 32 11 0 18 0 2 1 0 0 0 0
............................................................................ATGGGTCGCTGGTTCGACTCCGG....................... 23 3 9 3.44 31 31 0 0 0 0 0 0 0 0 0
...................................................................TGTAGATCCATAGGTCGCTG................................... 20 3 13 3.38 44 33 1 3 0 0 1 0 0 0 6
.........................CAGTTGGTAGAGCGCCGGT.............................................................................. 19 3 19 3.37 64 56 8 0 0 0 0 0 0 0 0
............................................................................ATAGGTCGCTGGTTCAAATC.......................... 20 0 9 3.33 30 9 2 8 0 5 5 0 0 1 0
..................CATAGCTCAGTTGGTAGAGC.................................................................................... 20 1 9 3.33 30 12 13 0 0 0 0 0 0 5 0
..................................GAGCGGTGGACTGTAGATC..................................................................... 19 1 4 3.25 13 0 2 0 7 0 0 2 2 0 0
.......................................................................................GTTCAAATCCGGCTCGAAGGA.............. 21 0 9 3.11 28 24 3 1 0 0 0 0 0 0 0
.........................CAGTTGGTAGAGCTGTGGACTGTA......................................................................... 24 1 9 3.11 28 0 0 0 22 0 0 5 1 0 0
..............................................................................AGGTCGCTGGTTCAAATCCG........................ 20 0 9 3.11 28 16 0 5 0 0 7 0 0 0 0
................CGCATAGCTCAGTTGGTAGA...................................................................................... 20 3 20 3.10 62 40 20 0 0 0 0 0 0 2 0
................CGAATAGCTCAGTTGGTAGA...................................................................................... 20 3 20 3.05 61 24 33 0 0 1 0 0 0 2 1
...........................................................................CATAGGTCGCTGGTTCAAATCCGGCTC.................... 27 0 9 3.00 27 11 0 11 0 4 1 0 0 0 0
....................................................................................CTGTTTCAAATCCGGCTCGAAGGACCA........... 27 2 1 3.00 3 0 0 2 0 1 0 0 0 0 0
..................................................AGCGATTGACAGAAAAGTAGACT................................................. 23 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.............................................................................TAGGTCGCTGGTTCATATCC......................... 20 1 9 3.00 27 3 2 19 0 3 0 0 0 0 0
..................................................................................TGCTGGTTCAAATCCGGCTCGAAGGACCA........... 29 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.................................................................................TCGCTGGTTCATATCCGGCTCGAAGGACC............ 29 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.....................................................................................TGCTTCAAATCCGGCTCGAAGGACCA........... 26 2 1 3.00 3 0 0 2 0 1 0 0 0 0 0
.................................................CAGCGATTGACAGAAAAGTAGA................................................... 22 1 1 3.00 3 0 0 0 1 0 1 0 0 1 0
....................................................................................CTGGTTCATATCCGGCTCGAAGGGCCA........... 27 3 1 3.00 3 1 0 0 0 1 0 0 0 1 0
........................................................................................TTAAAATCCGGCTCGAAGGACCA........... 23 2 2 3.00 6 0 0 6 0 0 0 0 0 0 0
.....................................................GATTGACAGAAAAGTAGA................................................... 18 0 1 3.00 3 0 0 0 0 0 3 0 0 0 0
............................TTGGTAGAGCTGTGGACTGTAGATCC.................................................................... 26 3 4 3.00 12 0 0 0 3 0 0 7 2 0 0
.........................................................................................TCAAATCCGGCTCGCAGGACCA........... 22 2 1 3.00 3 0 2 0 0 0 0 0 0 1 0
.........................................................................................TCACATCCGGCTCGAAGGACCA........... 22 2 1 3.00 3 1 1 0 0 1 0 0 0 0 0
....................................................................................CTCGTTCATATCCGGCTCGAAGGACCA........... 27 3 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.......................................................................................GTTCACATCCGGCTCGAAGGACCA........... 24 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0
...............GCCGTTAGCTCAGTTGGTAGA...................................................................................... 21 3 9 3.00 27 26 0 0 0 0 1 0 0 0 0
........................................................................................TTCAAATCCGGCTCGAAGGACCAA.......... 24 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................GTTTAAATCCGGCTCGAAGGACCA........... 24 2 1 3.00 3 0 0 2 0 1 0 0 0 0 0
.......................................................................................GGTCATATCCGGCTCGAAGGACCA........... 24 3 2 3.00 6 0 0 4 0 2 0 0 0 0 0
.................CGGTAGCTCAGTTGGTAGA...................................................................................... 19 1 9 3.00 27 26 1 0 0 0 0 0 0 0 0
.......................................................................................TTTCAAATCCGGCTCGAAGGACCA........... 24 2 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.......................................................................................GTTCGACTCCGGCTCGAAGGACCA........... 24 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...................................................GCGATTGACAGAAAAGTAGACA................................................. 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................CGATGGTTCATATCCGGCTCGAAGGACCA........... 29 3 1 3.00 3 0 0 1 0 2 0 0 0 0 0
...................................................................................TCTGGTTCAAATCCGGCTCGAAGGACCA........... 28 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................GTTCAAATCCGGCTCGAAGGACCG........... 24 2 1 3.00 3 2 1 0 0 0 0 0 0 0 0
................................................ACAGCGATTGACAGAAAAGTAG.................................................... 22 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.....................................................................................TGGCTCAAATCCGGCTCGAAGGACCA........... 26 2 1 3.00 3 2 0 0 0 1 0 0 0 0 0
...................................................................................GCTGGTTCATATCCGGCTCGAAGGACC............ 27 2 1 3.00 3 1 0 2 0 0 0 0 0 0 0
.................................................................................TCGCTGGTTCAGATCCGGCTCGAAGGACC............ 29 2 1 3.00 3 0 0 2 0 0 0 0 0 0 1
...............................................................................GGTCGGCGGTTCAAATCC......................... 18 2 15 2.93 44 44 0 0 0 0 0 0 0 0 0
..............................................................................AGGTCGCTGGTTCAAATC.......................... 18 0 9 2.89 26 12 0 7 0 3 4 0 0 0 0
..............................................................................AGGTCGCTGGTTCAGATCC......................... 19 1 9 2.89 26 8 0 16 0 2 0 0 0 0 0
..........................AGTTGGTAGAGCAGCTGACT............................................................................ 20 3 16 2.88 46 39 5 0 0 0 0 0 0 0 2
...................................................................TGTAGATCCATAGGTCGCTGGTTCA.............................. 25 3 5 2.80 14 12 0 0 0 0 0 2 0 0 0
.............................................................................TGGGTCGCTGGTTCGACTCCGGC...................... 23 3 10 2.80 28 27 0 0 0 1 0 0 0 0 0
.................CGTCAGCTCAGTTGGTAGA...................................................................................... 19 2 9 2.78 25 14 10 0 0 0 0 0 0 1 0
...............................................................................GGTCGCTGGTTCAGATCCGG....................... 20 1 9 2.78 25 9 0 11 0 1 4 0 0 0 0
................................................................................GTCGCTGGTTCAAATCCGG....................... 19 0 9 2.78 25 16 0 7 0 0 2 0 0 0 0
.........................................................................TCCATAGGTCGCTGGTTCATATCCGG....................... 26 1 9 2.78 25 5 0 18 0 1 1 0 0 0 0
..............................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG................ 28 0 9 2.78 25 15 0 7 0 3 0 0 0 0 0
.................CGATAGCTCAGTTGGTAGAG..................................................................................... 20 0 9 2.67 24 0 0 0 0 0 22 0 0 2 0
..................CATAGCTCAGTTGGTAGAG..................................................................................... 19 1 9 2.67 24 16 8 0 0 0 0 0 0 0 0
......................................................................................GGTTCAAATCCGGCTCGAAG................ 20 0 9 2.67 24 14 4 4 0 0 2 0 0 0 0
.............CGTTCGATAGCTCAGTTGGTAGAGC.................................................................................... 25 1 9 2.67 24 0 0 21 0 3 0 0 0 0 0
...............................................................................GGTCGCTGGTTCAAATCCGGC...................... 21 0 9 2.56 23 19 0 4 0 0 0 0 0 0 0
.................CGTTAGCTCAGTTGGTAGAG..................................................................................... 20 1 9 2.56 23 18 5 0 0 0 0 0 0 0 0
...............................................................................GGTCGCTGGTTCGACTCCGGCTT.................... 23 3 9 2.56 23 23 0 0 0 0 0 0 0 0 0
.................CGTTAGCTCAGTTGGTAGAGC.................................................................................... 21 1 9 2.56 23 12 8 0 0 1 0 0 0 2 0
...............................................................................GGTCGCTGGTTCAAATCCG........................ 19 0 9 2.56 23 20 0 0 0 1 2 0 0 0 0
.............CCTTCGATAGCTCAGTTGGAGA....................................................................................... 22 3 9 2.56 23 0 12 0 11 0 0 0 0 0 0
......................................................................................GGCTCAAATCCGGCTCGAAGGACCA........... 25 2 2 2.50 5 0 0 4 0 1 0 0 0 0 0
.....................................CGGTGGACTGTAGATCC.................................................................... 17 2 12 2.50 30 0 0 0 29 0 0 1 0 0 0
................................................................................GTCGCTGGTTCGACTCCGG....................... 19 2 10 2.50 25 25 0 0 0 0 0 0 0 0 0
.............CCTTCGATAGCTCAGTTGGTAGAGCTGTG................................................................................ 29 1 9 2.44 22 0 17 5 0 0 0 0 0 0 0
...........................................................................CATAGGTCGCTGGTTCAAATCCGGCT..................... 26 0 9 2.44 22 16 0 5 0 0 1 0 0 0 0
..............................................................................ATGTCGCTGGTTCAAATCCGG....................... 21 1 9 2.44 22 0 0 20 0 2 0 0 0 0 0
....................................................................................CTGGTTCAAATCCGGCTCGAAG................ 22 0 9 2.44 22 16 0 5 0 0 1 0 0 0 0
...............................................................................GGTCGCTGGTTCAAATCCGGCTCGAA................. 26 0 9 2.44 22 20 0 1 0 1 0 0 0 0 0
............................................................................ATAGGTCGCTGGTTCAAATCCGGCTC.................... 26 0 9 2.44 22 9 0 5 0 8 0 0 0 0 0
.............................................................................TAGGTCGCTGGTTCAAATC.......................... 19 0 9 2.44 22 12 4 3 0 2 1 0 0 0 0
.................CCATAGCTCAGTTGGGAGA...................................................................................... 19 2 16 2.38 38 31 5 0 0 0 0 0 0 2 0
..............................................................................AGGTCGCAGGTTCAAACCCT........................ 20 3 14 2.36 33 31 2 0 0 0 0 0 0 0 0
..............CTTCGATAGCTCAGTTGGTAGA...................................................................................... 22 0 9 2.33 21 15 0 3 0 0 3 0 0 0 0
............................................................................ATAGGTCGCTGGTTCAAATCCG........................ 22 0 9 2.33 21 15 0 4 0 0 2 0 0 0 0
...............................................................................GGTCGCTGGTTCAGATCC......................... 18 1 9 2.33 21 10 0 10 0 0 1 0 0 0 0
................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG................ 26 0 9 2.33 21 18 0 2 0 0 0 0 0 1 0
............................................................................AGAGGTCGCTGGTTCATATCCGG....................... 23 2 13 2.31 30 0 0 28 0 2 0 0 0 0 0
................................................................................GTCGCTGGTTCGACTCCGGCTTG................... 23 3 10 2.30 23 23 0 0 0 0 0 0 0 0 0
...............GCCGGTAGCTCAGTTGGTAGAG..................................................................................... 22 3 14 2.29 32 32 0 0 0 0 0 0 0 0 0
.................................AGAGCTGTGGACTGTAGATC..................................................................... 20 2 4 2.25 9 0 0 0 4 0 0 4 1 0 0
...................ATAGCTCAGTTGGTAGAGCAGCTGA.............................................................................. 25 3 9 2.22 20 18 1 0 0 0 0 0 0 0 1
.............CCTTCGATAGCTCAGTTGGTAGAGCAGT................................................................................. 28 1 9 2.22 20 11 5 4 0 0 0 0 0 0 0
............................................................................ATGGGTCGCTGGTTCGACTCCGGC...................... 24 3 9 2.22 20 19 0 0 0 0 0 0 0 1 0
.............................................................................TAGGTCGCTGGTTCAAATCCGGCT..................... 24 0 9 2.22 20 20 0 0 0 0 0 0 0 0 0
................................................................................GTCGCTGGTTCAAATCCGGCTCG................... 23 0 9 2.22 20 20 0 0 0 0 0 0 0 0 0
...............................................................................GGTCGATGGTTCAAGTCC......................... 18 2 17 2.18 37 37 0 0 0 0 0 0 0 0 0
..............CTTCGATAGCTCAGTTGG.......................................................................................... 18 0 9 2.11 19 18 0 0 0 0 1 0 0 0 0
.........................................................................TCCATAGGTCGCTGGTTCA.............................. 19 0 9 2.11 19 16 0 1 0 0 1 0 0 1 0
.............................................................................TAGGTCGCTGGTTCAGATCCGG....................... 22 1 9 2.11 19 0 0 17 0 1 1 0 0 0 0
........................................................................................TTCAAATCCGGCTCGAAGG............... 19 0 9 2.11 19 17 1 0 0 0 1 0 0 0 0
..............................................................................AGGTCGCTGGTTCAAATCCGGC...................... 22 0 9 2.11 19 8 0 7 0 2 1 1 0 0 0
.................GCATAGCTCAGTTGGTAGAG..................................................................................... 20 2 10 2.10 21 15 6 0 0 0 0 0 0 0 0
.......................................................................................GTTCAAATCCGGCTCGAACGACCA........... 24 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.....................................................................................CGGTTCAAATCCGGCTCGAAGGACCA........... 26 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.....................................................GATTGACAGAAAAGTAGAC.................................................. 19 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0
....................................................................................CTGGTTCAAATCCGGTTCGAAGGACCA........... 27 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................CTGTTTCATATCCGGCTCGAAGGACCA........... 27 3 1 2.00 2 0 0 1 0 1 0 0 0 0 0
..................................................................................CGATGGTTCAGATCCGGCTCGAAGGACCA........... 29 3 1 2.00 2 0 0 2 0 0 0 0 0 0 0
................................TAGAGCGGTGGACTGTAGAGC..................................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
..................................................................................CGCTGGTTCAAATCCGGCTCGAAGGACCG........... 29 2 1 2.00 2 0 1 0 0 0 0 0 0 0 1
.............................................................................................ATCCGGCTCGAAGGATCA........... 18 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0
..................................................................................CGCTGGGTCAAATCCGGCTCGAAGGACCA........... 29 2 1 2.00 2 0 0 1 0 0 0 0 0 1 0
.....................................................GATTGACAGAAAAGTAGACATCC.............................................. 23 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0
.................................................................ACTGTACATCCATAGGTCGCTG................................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................GTTCAAATCCGGCCCGAAGGACCA........... 24 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0
................TCGATAGCTCAGTTGGTAGA...................................................................................... 20 0 9 2.00 18 7 1 0 0 0 9 0 0 1 0
..............................................................................AGGTCGCTGGTTCAAATCCGGCTCG................... 25 0 9 2.00 18 17 0 1 0 0 0 0 0 0 0
........................................................................................TGCAAATCCGGCTCGAAGGACCA........... 23 2 5 2.00 10 0 0 8 0 2 0 0 0 0 0
.......................................................................................GTTCAAATCCGGCTCGAAAGACCA........... 24 2 1 2.00 2 0 1 0 0 0 1 0 0 0 0
....................................................................................CTGGTTCAAATCCGGCTCGAAGGGCCA........... 27 2 1 2.00 2 0 1 0 0 0 1 0 0 0 0
........................................................TGACAGAAAAGTAGACATCCATAGG......................................... 25 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

GAGGGCGAGCATCGGAAGCTATCGAGTCAACCATCTCGCCACCTGACATCTCGCTAACTGTCTTTTCATCTGTAGGTATCCAGCGACCAAGTTTAGGCCGAGCTTCCTAGTATTAAAAAAGA
**************************************************......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 M062
head
 SRR902012
CNS imaginal disc
 V112
male body		 M059
embryo
 GSM444067
head
..............................CCATCTAGCAGCCTGACATC........................................................................ 20 3 9 4.56 41 41 0 0 0 0 0 0 0
..............................CCATCTAGCAGCCTGACATCT....................................................................... 21 3 9 4.44 40 40 0 0 0 0 0 0 0
..................................CTAGCAACCTGACATCTTG..................................................................... 19 3 20 2.50 50 0 47 0 0 3 0 0 0
..............................CCATCTAGCAGCCTGACAT......................................................................... 19 3 14 2.43 34 34 0 0 0 0 0 0 0
..................................CTAGCAACCTGACATCT....................................................................... 17 2 20 2.35 47 0 16 29 0 2 0 0 0
...............................CATCTAGCAGCCTGACATC........................................................................ 19 3 17 1.47 25 21 0 0 4 0 0 0 0
...............................CATCTAGCAGCCTGACATCT....................................................................... 20 3 12 1.33 16 15 0 0 1 0 0 0 0
.........................................CCTGACATCTTGCTAGCAG.............................................................. 19 3 6 0.50 3 0 3 0 0 0 0 0 0
......................................................................TGTAGGTATCCAGCGACCAAGT.............................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.............GGAAGCTATCGAGTCAACCATCT...................................................................................... 23 0 9 0.33 3 1 0 0 0 2 0 0 0
.............................ACCATCTAGCAGCCTGACAT......................................................................... 20 3 11 0.27 3 2 0 0 1 0 0 0 0
............CGGAAGCTATCGAGTCAAC........................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
..................................CTAGCAACCTGACATCTCGT.................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0
..............................CGATCTAGCAACCTGACATCT....................................................................... 21 3 9 0.22 2 2 0 0 0 0 0 0 0
...........................................................................GTAGCCAGCGACCAAGTCTAGGCCGAA.................... 27 3 9 0.22 2 0 2 0 0 0 0 0 0
....................................................................................GACCAAGTTTAGGCCGAGCTT................. 21 0 9 0.22 2 0 0 2 0 0 0 0 0
...................................................................................CGACCAAGTTTAGGCCGAGCT.................. 21 0 9 0.22 2 2 0 0 0 0 0 0 0
..................................CTAGCAACCTGACATCTC...................................................................... 18 2 5 0.20 1 0 0 1 0 0 0 0 0
..................................CTAGCAGCCTGACATCTCGC.................................................................... 20 3 6 0.17 1 0 0 0 1 0 0 0 0
.............................ACCATCTAGCAGCCTGACATCT....................................................................... 22 3 9 0.11 1 1 0 0 0 0 0 0 0
.............GGAAGCTATCGAGTCAACCATC....................................................................................... 22 0 9 0.11 1 0 0 0 0 0 0 0 1
...............CCACTATCGAGTCAACCATCT...................................................................................... 21 3 9 0.11 1 0 0 0 0 0 1 0 0
...............AAGCTATCGAGTCAACCATCT...................................................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0 0
.....................................................................................ACCAAGTTTAGGCCGAGCTTC................ 21 0 9 0.11 1 1 0 0 0 0 0 0 0
..............................CCATCTAGCGGCCTGACATCT....................................................................... 21 3 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................ATCCAGCGACCAAGTTTAGGC........................ 21 0 9 0.11 1 1 0 0 0 0 0 0 0
.........................................................................AGGTATCCAGCGACCAAGTTT............................ 21 0 9 0.11 1 0 0 0 0 0 1 0 0
.............................ACCATCTAGCAGCCTGACATC........................................................................ 21 3 9 0.11 1 1 0 0 0 0 0 0 0
.................................................................................AGCGACCAAGCTGAGGCCG...................... 19 2 10 0.10 1 1 0 0 0 0 0 0 0
..................................CTAGCCGCCTGACATCT....................................................................... 17 2 17 0.06 1 0 1 0 0 0 0 0 0
.................................TCTAGCAACCTGACATC........................................................................ 17 2 18 0.06 1 0 0 1 0 0 0 0 0
..............GAGGTTATCGAGTCAACTA......................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0
...................................................................................................GAACTTCCTAGTACTGAAA.... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
..................................CTCGCAGCCTGACATCT....................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:5695045-5695166 + dps_1038 CTCCCG--CTCGTAGCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGC-G--ATTGA----------CAG------AA----AAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCATA---ATTT---------TT---TCT
droPer2 scaffold_2:5887722-5887843 + dpe_1084 CTCCCG--CTCGTAGCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGC-G--ATTGA----------CAG------AA----AAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCATA---ATTT---------TT---TCT
droWil2 scf2_1100000004516:2990688-2990794 + C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGCGGTAAAT---------TT--------AC---ATTAAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TT---TGT
droVir3 scaffold_12963:9819157-9819281 + dvi_11160 CCCTCG--TCATATACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGCGG-T-----------------GCAAAGTGTAA----AAGTAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATTT-AATATTTT---------TT---GCT
droMoj3 scaffold_6540:23387977-23388099 - dmo_2036 CTGCCGTCCATG-TGCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAACGGCAATT-------------------GC---AAGAAATAGACATCCATAGGTCGCTGGTTCGACTCCGGCTCGAAGGATTC-G---ATTT---------TT---TAT
droGri2 scaffold_15033:5145-5254 + C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGT-G--ATTT------------------ACTA-AAGATATAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATTGTA---ATCA---------TT---TTT
droAna3 scaffold_13334:1046320-1046441 + dan_2180 CTTCCG--T---GGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGACG-GTGGTTGA----------GAA------AACA-G-CGCGGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAAT-TA---CTTT---------TT---TTT
droBip1 scf7180000396800:31048-31180 - TCGACG--CTCGTCACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTGA-GAGATTCGGGTGCAATA--------GC---ACAGAGCAGGCATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATTAAA---CTTT---------TT---TAT
droKik1 scf7180000302473:360367-360469 - C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGCTG-GATATT----------------------T----AAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCA-----TTTT---------TT---TCA
droFic1 scf7180000453924:381444-381552 + C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATC-GGAATT-------------------GC---AATAAGTAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCAGG---TTTT---------TT---TAT
droEle1 scf7180000491212:1317449-1317566 + CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAAA-------CATGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TTTTG------TT---TTT
droRho1 scf7180000778821:1063-1177 + CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AA-A-------CATGCAAAAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TTT--------TG---TTT
droBia1 scf7180000302402:7170282-7170396 - CCCGGG--TTTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAGA-------CAAGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TT---TGT
droTak1 scf7180000415417:557208-557320 - CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAGA-------CATGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT--------------TTG
droEug1 scf7180000408193:306645-306766 + AGCCCT-CAACGACCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATG-GCAAAT---------CGACGC------AA----CAGCAGTGATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAA-------GTTT---------TT---TTT
dm3 chr3R:4468043-4468157 - CCCCCA--C---CAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------CAAA-------CAAGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TTTTTCAG
droSim2 2l:2355782-2355889 + C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATT-GGGATT-------------------ACGA----ATGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCGGA---AAAT---------TT---TTT
droSec2 scaffold_5:636086-636193 + C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATT-GGGATT-------------------ACGA----ATGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCGGA---ATAT---------TT---TTT
droYak3 3R:8531006-8531120 - dya_975 CCCGAG--TTCCCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAAA-------CGAGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TT---GCT
droEre2 scaffold_4770:17092347-17092471 + CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAA------AACATGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TTTTGTCGAATTT---TTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTCCCG--CTCGTAGCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGC-G--ATTGA----------CAG------AA----AAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCATA---ATTT---------TT---TCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGAC.................................................................221598.00598421660112071181773
................................................................................................................GTTCAAATCCGGCTCGAAG...............................199152.33137101096394612167002
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................259136.78123103934702724021651014
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................23959.675370275140511502000
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................23957.22515015413501528270732
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24954.56491037191151400000
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................21942.00378018190210302000
................................................................................................................GTTCAAATCCGGCTCGAA................................18939.22353028814030318000
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................21933.893050142108133722010
...............CCTTCGATAGCTCAGTTGG................................................................................................................................19933.8930502275046614241
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22924.7822301068071929000
.....................ATAGCTCAGTTGGTAGAGCGGTGGA....................................................................................................................25923.002070854131964571
.....................................................GC-G--ATTGA----------CAG------AA----AAGTAGAC.................................................................21122.002202110000000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27919.441750926831002000
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGA..................................................................21119.00190610101532
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................19918.8917001193821100000
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................22918.5616703512011123022
........................................................................................................GGTCGCTGGTTCAAATCC........................................18916.8915201191921200000
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................24916.671500823322812020
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................20915.671410771305100000
...............CCTTCGATAGCTCAGTTG.................................................................................................................................18913.56122080003172020
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGACA................................................................23113.001301100000110
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................22912.671140493103301000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................27912.67114010671000000
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................29912.331110039446022000
.................................................................................................................TTCAAATCCGGCTCGAAG...............................18911.5610409400901000
...................CGATAGCTCAGTTGGTAGA............................................................................................................................19911.44103020306926003
....................GATAGCTCAGTTGGTAGA............................................................................................................................1899.8989016006900004
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................1999.5686062131820000
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................2099.118207510330000
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................2199.00811161203916006
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCG..................................2498.447607510000000
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................2097.8971021703614020
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2497.4467053101300000
.................................GTAGAGCGGTGGACTGTAGAGC-..........................................................................................................2217.0070000000007
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................2096.896205730002000
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................1896.676035600001000
........................................................................................................GGTCGCTGGTTCAAATCCGGCT....................................2296.565905512100000
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................1996.445804400383000
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................2096.4458022272403000
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................2196.3357031901322000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTC...................................2396.225604664000000
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................2095.895302204720000
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................2295.334806703500000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2395.224704043000000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................2695.0045024180300000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................2595.0045019251000000
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAG...................................................................2015.0050200100020
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................2895.00450111507012000
......................................................C-G--ATTGA----------CAG------AA----AAGTAGACAG...............................................................2215.0050100010210
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................2194.2238021304010000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTC...................................2494.003602267100000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................2493.8935113141300012
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGC.....................................2593.7834021103000000
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2393.5632011171210000
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................2093.33300985512000
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................2193.112802410003000
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................2093.112801650700000
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC...................................2793.0027011114100000
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGACT................................................................2313.0030200001000
........................................................G--ATTGA----------CAG------AA----AAGTAGA..................................................................1813.0030000300000
.....................................................GC-G--ATTGA----------CAG------AA----AAGTAGACA................................................................2213.0030300000000
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................1892.892601273400000
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................1992.782501670200000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG...............................2892.782501573000000
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................2092.672400002220000
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................2092.672401440204000
........................................................................................................GGTCGCTGGTTCAAATCCGGC.....................................2192.562301940000000
........................................................................................................GGTCGCTGGTTCAAATCCG.......................................1992.562302001200000
...............CCTTCGATAGCTCAGTTGGAGA.............................................................................................................................2292.5623000000120011
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCT....................................2692.442201650100000
.............................................................................................................CTGGTTCAAATCCGGCTCGAAG...............................2292.442201650100000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA................................2692.442202011000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC...................................2692.44220958000000
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................1992.442201232104000
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2292.332101530300000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................2292.332101540200000
.........................................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG...............................2692.332101820010000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCT....................................2492.222002000000000
.........................................................................................................GTCGCTGGTTCAAATCCGGCTCG..................................2392.222002000000000
................CTTCGATAGCTCAGTTGG................................................................................................................................1892.111901800100000
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................1992.111901610110000
.................................................................................................................TTCAAATCCGGCTCGAAGG..............................1992.111901700101000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................2292.11190872100010
........................................................G--ATTGA----------CAG------AA----AAGTAGAC.................................................................1912.0020000200000
..................................TAGAGCGGTGGACTGTAGAGC-..........................................................................................................2112.0020000000002
......................................................................................................................ATCCGGCTCGAAGGATCA..........................1812.0020001001000
........................................................G--ATTGA----------CAG------AA----AAGTAGACATCC.............................................................2312.0020010100000
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................2092.00180700911000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCG..................................2592.001801710000000
.............................................................TGA----------CAG------AA----AAGTAGACATCCATAGG........................................................2512.0020100000100
droPer2
CTCCCG--CTCGTAGCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGC-G--ATTGA----------CAG------AA----AAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCATA---ATTT---------TT---TCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................GTTCAAATCCGGCTCGAAG...............................199117.89106114129510108516
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGAC.................................................................22198.009831592015
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................25957.115142524219621930
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................23946.44418111662260015
................................................................................................................GTTCAAATCCGGCTCGAA................................18944.00396101074616226
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................23943.2238950452220270
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................21937.113342197132003
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................19919.7817803211720
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24918.78169015514000
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................22918.33165322131009
...................CGATAGCTCAGTTGGTAGA............................................................................................................................19915.78142812660056
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................20915.6714107267002
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................29914.78133320850016
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................19913.5612241135000
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................21912.89116188480240
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................22912.4411214462014
...............CCTTCGATAGCTCAGTTGG................................................................................................................................19912.3311132940101415
....................GATAGCTCAGTTGGTAGA............................................................................................................................18912.2211058860110
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................24911.8910715449003
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................21911.78106236613004
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22911.3310246429005
...............CCTTCGATAGCTCAGTTG.................................................................................................................................18910.89982252921192
.....................ATAGCTCAGTTGGTAGAGCGGTGGA....................................................................................................................2597.787002050738
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................2797.56684565003
........................................................G--ATTGA----------CAG------AA----AAGTAGACATC..............................................................2217.007700000
.....................................................GC-G--ATTGA----------CAG------AA----AAGTAGAC.................................................................2117.007070000
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................2095.78521741003
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................2095.565021136010
........................................................................................................GGTCGCTGGTTCAAATCC........................................1895.44492407000
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................1895.224792100710
..........................................................................................AGTAGACATCCATAGGTCGCTG..................................................2215.005500000
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................2894.444051415006
.................................................................................................................TTCAAATCCGGCTCGAAG...............................1894.33393262008
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................2194.113741317111
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................2093.78341971007
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................2093.78342256010
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................2793.67330330000
...........................................................................................GTAGACATCCATAGGTCGCTG..................................................2123.507700000
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................2193.443101470010
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................2093.44312231005
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................2093.443150100016
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................2093.222912143000
........................................................G--ATTGA----------CAG------AA----AAGTAGAC.................................................................1913.003300000
........................................................G--ATTGA----------CAG------AA----AAGTAGACATCC.............................................................2313.003300000
......................................................C-G--ATTGA----------CAG------AA----AAGTAGACATCC.............................................................2413.003300000
.............................................................TGA----------CAG------AA----AAGTAGACATCC.............................................................2013.003300000
...............................................................A----------CAG------AA----AAGTAGACATCC.............................................................1813.003300000
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGA..................................................................2113.003021000
...........................CAGTTGGTAGAGCGGTGGACTGTAGAGC-..........................................................................................................2813.003300000
................................................................................................................GTTCAAATCCGGCTCGAAGGAC............................2292.78258600011
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCG..................................2492.33210210000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2392.33210191100
...............CCTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................2792.33212190000
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................1892.22200134030
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................1992.11191116010
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2492.11190190000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................2692.11193132001
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................2292.11190117001
.............................................................TGA----------CAG------AA----AAGTAGACATC..............................................................1912.002200000
......................................................C-G--ATTGA----------CAG------AA----AAGTAGACAG...............................................................2212.002200000
..............................................................GA----------CAG------AA----AAGTAGACATCCATAGGT.......................................................2512.002200000
.....................................................................................................................AATCCGGCTCGAAGGATCA..........................1912.002000200
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGACA................................................................2312.002020000
...........GTAGCCTTCGATAGCTCAGTTGGTAG.............................................................................................................................2612.002020000
...............CCTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................2792.00180170001
...................................................................................................................CAAATCCGGCTCGAAGGATCAT.........................2212.002200000
.......................................CGGTGGACTGTAGAGC-G--ATTGA----------C.......................................................................................2312.002200000
............................................GACTGTAGAGC-G--ATTGA----------CA......................................................................................1912.002002000
..................................................................................................................TCAAATCCGGCTCGAAGGATCA..........................2212.002010001
...............CCTTCGATAGCTCAGTTGGAGA.............................................................................................................................2291.8917090008
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................2191.89172112002
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................2291.7816482002
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................2091.7816853000
........................................................................................................GGTCGCTGGTTCAAATCCGGCT....................................2291.67150131010
.................................................................................................................TTCAAATCCGGCTCGAAGGAC............................2191.67151110003
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................2091.67150114000
.....................ATAGCTCAGTTGGTAGAGCA.........................................................................................................................2091.56140200120
........................................................................................................GGTCGCTGGTTCAAATCCGGCTC...................................2391.56140120020
.............................................................................................AGACATCCATAGGTCGCTG..................................................1921.503300000
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................1991.4413412141
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................2191.44130101002
.............................GTTGGTAGAGCGGTGGAC...................................................................................................................1891.3312421005
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2391.3312444000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................2491.22110110000
.................TTCGATAGCTCAGTTGGT...............................................................................................................................1891.1110109000
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................1991.1110521020
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA................................2691.11100100000
..................................................................................................................TCAAATCCGGCTCGAAGGAC............................2091.1110510004
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................2191.1110610003
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2291.1110414001
....................................................AGC-G--ATTGA----------CAG------AA----AAGTAGACT................................................................2311.001100000
........................................GGTGGACTGTAGAGC-G--ATTGA----------........................................................................................2111.001100000
....................GATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................2791.009510003
droWil2
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGCGGTAAAT---------TT--------AC---ATTAAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TT---TGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
C---------------CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................259812.7873152063318664605191
................................................................................................................GTTCAAATCCGGCTCGAAG...............................198789.636317839674163106539
................................................................................................................GTTCAAATCCGGCTCGAA................................189375.2233777444186198382
C---------------CTTCGATAGCTCAGTTGGTAGA............................................................................................................................239273.89246562409511167101
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................219247.2222251043652143585
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................299168.8915205013002141
...................CGATAGCTCAGTTGGTAGA............................................................................................................................199150.441354217201107163
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................289128.56115721616263599
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................219108.7897956220121418164
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................209101.449131434674083
....................GATAGCTCAGTTGGTAGA............................................................................................................................189100.789070131379883
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22991.56824871775841389
C---------------CTTCGATAGCTCAGTTGGTAG.............................................................................................................................22984.89764111569414165
C---------------CTTCGATAGCTCAGTTGG................................................................................................................................19969.56626211812393101
C---------------CTTCGATAGCTCAGTTG.................................................................................................................................18965.22587159148442
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................19958.895301501344917
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................21957.11514312734206
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................22956.67510055044510
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................23951.224611481382659
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................23951.0045901262926044
C---------------CTTCGATAGCTCAGTTGGAGA.............................................................................................................................221044.3044303923113538
...................CGATAGCTCAGTTGGTAG.............................................................................................................................18942.003780503667
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................18939.113522096420626
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................19935.7832226651024197
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20933.5630207532375
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20932.7829537621935142
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................20832.752621341387910
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................21831.632530421089310
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................20928.222541126813241
C---------------CTTCGATAGCTCAGTTGGTAGAGCGTG.......................................................................................................................28926.2223600711623
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................20925.562307563110828
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................21925.33228063151446
C---------------CTTCGATAGCTCAGTTGGTA..............................................................................................................................21924.44220192199711
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................19922.4420202917714
C---------------CTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................24921.56194026441213
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................20919.5617601121603
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................20819.1315306473133
C---------------CTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................27918.0016208240400
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................24917.5615808213585
........................................................................................................GGTCGCTGGTTCAAATCC........................................18916.331473653715
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................20915.8914303181013
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27915.671410525804
C---------------CTTCGATAGCTCAGTTGGT...............................................................................................................................20915.4413909151141
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24914.4413001001263
.................................................................................................................TTCAAATCCGGCTCGAAG...............................181013.7013718320303
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................22913.2211902413802
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................21813.131050574224
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................20912.78115027651310
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................19912.2211015081140
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................22911.009911395323
...............................................................................................................GGTTCAAATCCGGCTCGAA................................19910.339302735292
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................1999.898901814327
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................1999.44852598160
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................2198.447672281623
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................20118.27911711153
.................TTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................2797.78700434293
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................2597.3366058170
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................1897.006322401522
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................19116.55728311311
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................1996.44580155344
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCT....................................2696.3357063453
C---------------CTTCGATAGCTCAGTTGGAG..............................................................................................................................2196.3357053031
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2296.005412411144
C---------------CTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................2795.56500271661
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2295.00450314271
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................2694.67420202200
.................TTCGATAGCTCAGTTGGT...............................................................................................................................1894.4440000400
.................................................................................................ATCCATAGGTCGCTGGTT...............................................18114.27470160292
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................2784.1333029040
....................................................................................................CATAGGTCGCTGGTTCAAAT..........................................2094.11372171512
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................1994.1137370261
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................2094.1137172234
.................................................................................................ATCCATAGGTCGCTGGTTCAAATC.........................................2494.1137231013
C---------------CTTCGATAGCTCAGTTGGTAGG............................................................................................................................2394.1137362224
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................2493.89350192122
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2393.89351110194
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCT....................................2593.7834041254
....................................................................................................CATAGGTCGCTGGTTCAAATCCG.......................................2393.7834064240
................CTTCGATAGCTCAGTTGGTAG.............................................................................................................................2193.6733021192
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................2193.2229214166
...................................................................................................................CAAATCCGGCTCGAAGGATT--------...................2063.1719105130
................CTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................2793.1128020521
......................................................................................................TAGGTCGCTGGTTCAAAT..........................................1893.1128280414
...................CGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................2593.1128008200
..............................................................................................................TGGTTCAAATCCGGCTCGA.................................1993.1128072100
....................GATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................2493.0027009180
......................................................................................................TAGGTCGCTGGTTCAAATCCG.......................................2193.0027171108
..............................................................................................................TGGTTCAAATCCGGCTCGAAGGA.............................2383.0024010446
C---------------CTTCGATAGCTCAGTTGT................................................................................................................................1992.78250150100
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC...................................2792.6724172140
.............................................................................................................CTGGTTCAAATCCGGCTCGAA................................2192.6724081420
..........................TCAGTTGGTAGAGCGGTG......................................................................................................................1892.5623042170
.............................GTTGGTAGAGCGGTGGAC...................................................................................................................1892.442250377
........................................................................................................GGTCGCTGGTTCAAATCCG.......................................1992.2220232121
C---------------CTTCGATAGCTCAGTTGGA...............................................................................................................................2092.222006905
..............................................................................................................TGGTTCAAATCCGGCTCG..................................1892.1119015130
droVir3
CCCTCG--TCATATACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGCGG-T-----------------GCAAAGTGTAA----AAGTAGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATTT-AATATTTT---------TT---GCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............CCTTCGATAGCTCAGTTG.................................................................................................................................18103456.00345600180334520543994844810172181612471313812020735706323526003205208460017904658301758276661489234121215150000000000000002200121320
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2510810.4081046208201194386854328533843615120494577981334226318927547551481072380227730711232453198173198790020144113101913242744163676014978710
....................................................CGG-T-----------------GCAAAGTGTAA----AAGTAGAT.................................................................231512.0051200519461017951264302301125031912652418233281015101974000000000000000000050160
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................2310328.5032851619718776110886532169219397149309312928126451107942143149138271222681271145000000000001000692431313933
................................................................................................................GTTCAAATCCGGCTCGAAG...............................197205.43143808482431371772230103110101001103002103341049236810525193097000000000000000010027142970
................................................................................................................GTTCAAATCCGGCTCGAA................................187176.4312352020327062385169321611256373011201133010238113831117122322742157000000000000000000026101220
...............CCTTCGATAGCTCAGTTGG................................................................................................................................1910145.2014521091239939516117617646434941310554397079809054107302449984884283500000000000000020001124918
...................CGATAGCTCAGTTGGTAGA............................................................................................................................191070.70707002361370372430158592252013000001001583122351233416701100000000000000000001160420
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................211066.60666015285717932046810641011512491031482722732453049629373422000000000000000000082070
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................201060.8060800181342781170616677104115367781519719103094425121011518000000000000001000036310151
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................221055.405540039645623332132545431040140331417810104121073435102511400000000000000001001251271
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................21852.884237151592400114230359604000411321411724256192832713200000000000000000003950
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................211047.30473212636054131408532351011140143133092610121110676900000000000000010011708280
................................................................................................TATCCATAGGTCGCTGGT................................................18142.0042002002000100000112530130000147220300000200000000000000000000000
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................201032.10321002420812332011834213001170330100362517823321812600000000000000000002415120
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................241030.803080045183418411282536614300300022540315957196543000000000000000000030160
.................................................................................................ATCCATAGGTCGCTG..................................................15829.0023200000000000000000000000000000000000000001112010000001000352387710000
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22828.632296656270101050122424232421012001713217234662400000000000000000000190
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................221026.70267103311000601010161710011017011102011011531342095200000000000000000101260
............................AGTTGGTAGAGCGGTGGAC...................................................................................................................19726.431857382101012351825000101200100004171712010001005100000000000000000000181
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................23723.8616700673100011000002110000001020110002427130102000000000000000100010070
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................19823.131850129004112100221000121210140110235515371601312100000000000000000000927
....................GATAGCTCAGTTGGTAGA............................................................................................................................181022.502250017204051703513008301400100101614111439154411000000000000000000048100
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................231021.502150035921001421122511010030001000000020460421000000000000000001029040
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................201019.80198006800010300209212000400110113003218511100000000000000000000116150
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................21719.57137001883000000100013100001100010000000100002000000000000000000024000
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................181017.1017101725301082416102000110001000000201120693340700000000000000000308220
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24716.7111700822300000000000000000100000000012012200000000000000000000003000
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................29716.57116000260000001002000100000000310202003312000000000000000000000280410
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................19816.00128123540100000000063342010000111518821373501000000000000000000001000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG..............................26715.711100010569113100000000012005330263221112020151200000000000000000000002
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................221014.9014910570121764230810000000000003010031122123000000000000000000064180
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................20814.25114412640100000000651103001112025116221121151300000000000000000001130
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................241013.7013700862301000000110200000000000100001023002100000000000000000004162
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................191013.601360040001533000482010001000010021202805100130000000000000000000010500
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................211012.601260014170405350101011200421100100104161392211000000000000000000019130
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27712.438700333200000000000120000000000100031053110000000000000000000002020
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................28712.2986002420103101020100000000010000000001120600000000000000000000110290
...............................................................................................ATATCCATAGGTCGCTGGT................................................19112.0012001000000000000010000000202012030000000000000000000000000000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCT....................................25711.868300452000100000000010101010001000060612130100000000000000000001000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................22711.578103181000134200100010001110100000003358063100000000000000000000320
....................................................CGG-T-----------------GCAAAGTGTAA----AAGTAGA..................................................................22111.0011000100000000200001001001011000001000200000000000000000000000000
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................191010.901090121160005242000001100301000000001112000220000000000000000000017710
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20810.758641094000100101100110003110100022028122246000000000000000000000610
................................................................................................TATCCATAGGTCGCTGGTT...............................................19110.0010000000000000002002000000000000150000000000000000000000000000000
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................2079.5767002620010001000000000000100000000110000001000000000000000000015000
........................GCTCAGTTGGTAGAGCGGTGG.....................................................................................................................2179.576700300013413130001000002020000403240300010200000000000000000000150
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................2079.576700303030301003100000000000000000102220000000000000000000000003130
.............................GTTGGTAGAGCGGTGGAC...................................................................................................................1879.43664020245112290000011007004011200100111003000000000000000000000001
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC............................2878.86622002020000100000010000010116111110023221000000000000000000000327
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................1988.38670090000110000010010010021072453390310010300000000000000000000000
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................2278.145700202700001000000000100000000000010000000000000000000000000006100
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................2178.14571124202010000100000100000101003022311010100000000000000000001160
................................................................................................................GTTCAAATCCGGCTCGAAGGAC............................2287.75625364400010000000000000000101000002032002000000000000000000000100
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................21107.70770030010251230481000103001000002002203040000000000000000000004610
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................2177.57530010301020400010000002000000011032564010200000000000000000000050
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCT....................................2677.43520027302000000000011220210000002003113000000000000000000000001000
.....................ATAGCTCAGTTGGTAGAGCGGTGGA....................................................................................................................2577.295100006511022000000000040020000110000100010100000000000000100003010
....................................................CGG-T-----------------GCAAAGTGTAA----AAGTAGATC................................................................2417.007000000000100000000000001000000020100000000000000000000000000110
................................................................................................TATCCATAGGTCGCTGGTC...............................................1917.007000000100000000000002010000001010000000100000000000000000000000
...................CGATAGCTCAGTTGGTAG.............................................................................................................................18106.70670021000812010420000000001000100213730210000000000000000000024100
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................2076.5746008403021300000001121000101021002422120000000000000000000000011
..................................................................................................TCCATAGGTCGCTGGTTC..............................................1886.5052007310000000010100000002441415141310300100000000000110000001001
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20106.5065008600093310020122001101000001002342001300000000000000000006120
.................................................................................................................TTCAAATCCGGCTCGAAG...............................1876.43450035100101000000000000000000001020201000000000000000000000000100
............................AGTTGGTAGAGCGGTGGA....................................................................................................................1876.14430000001110450000001000000212611001000100000000000000000000000150
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................20106.006000220205000111000000000010000000110610100000000000000000000026000
..........ATATACCTTCGATAGCTCAGT...................................................................................................................................2116.006001000300000000000000000000000000000001100000000000000000000000
....................................GAGCGGTGGACTGTAGCGG-T-----------------GCAAAG..................................................................................2616.006000000000000000000000000000000000000000000000000000000000000006
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................2085.504432131000000100000001001000000001021010020000000000000000000004020
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................2585.504400251300000000000001000000000000002000010000000000000000000001010
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................19105.30530013302000000004101002000000024011044032200000000000000000003100
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACT..................................................................................................................3375.29370000000000000000000000000000000000000000000100200111045442120000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTC...................................2375.003500136000000000000100001000000000000000000000000000000000000000014
........................................................T-----------------GCAAAGTGTAA----AAGTAGAT.................................................................2015.005000000000030200000000000000000000000000000000000000000000000000
....................................................CGG-T-----------------GCAAAGTGTAA----AAGTAGATA................................................................2415.005000000000020010000000000000000020000000000000000000000000000000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................2774.86340029200000000001100000010000000000000000000000000000000000000000
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................1974.71330091001001010000100010020100200000000010000000000000000000001110
..................TCGATAGCTCAGTTGGTA..............................................................................................................................18104.704700210002000000000000600001002301100410012000000000000000000000200
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................3274.4331000000000000000000000000000000000000000000000110200311366070000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCG..................................2474.29301012001000000000110020140002140000000000000000000000000000000000
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................22104.10410020200000100220100000000000001101212010000000000000000000003100
....................................................CGG-T-----------------GCAAAGTGTAA----AAGT.....................................................................1914.004000000200000000000001000000000000000000000000000000000000001000
...............................TGGTAGAGCGGTGGACTGTAGCGG-T-----------------GCA.....................................................................................2814.004000000000000000000000000000000000000000000000000000000000000004
..........ATATACCTTCGATAGCTCAGTTG.................................................................................................................................2314.004000000000000000000002100000100000000000000000000000000000000000
................................................................................................TATCCATAGGTCGCTGGTTA..............................................2014.004001000000000000000000010000010100000000000000000000000000000000
.................................GTAGAGCGGTGGACTGTAGCGG-T-----------------GCAAAG..................................................................................2914.004000000000000000000000000000000000000000000000000000000000000004
....................................................CGG-T-----------------GCAAAGTGTAA----AAGTA....................................................................2014.004000010000000000000000000001000000000000000000000000000000002000
.................................GTAGAGCGGTGGACTGTAGCGG-T-----------------GCAAAGA.................................................................................3014.004000000000000000000000000000000000000000000000000000000000000004
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTC...................................2473.86270071700000000000100000010000000000000000000000000000000000001000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAG...............................2573.8627000004000000000000000020001017140101200000000000000000000000003
...............................................................................................................GGTTCAAATCCGGCTCGAAGGA.............................2273.7126310103010100000000000000000011200500000000000000000000000000070
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................19103.6036000001181200270000000000000000020061000000000000000000000003020
.................................................................................................ATCCATAGGTCGCTGGTT...............................................1883.5028003100010200001142230010100001010001110100000000000000000000000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2373.4324007800000000000300110020000000000001000000000000000000000001000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................2673.43240261300000000000000000000001000000000010000000000000000000000001
...............CCTTCGATAGCTCAGTTGT................................................................................................................................19103.4034000010100000000002000004503192210000002100000000000000000000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................2473.29230017300000000000000000000000000000001011000000000000000000000000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................2273.14220061500000000001000000000000000000000000000000000000000000000000
............................................................................................................................CTCGAAGGATTT-AATATTT..................1913.003000010000000000000000000010100000000000000000000000000000000000
..........ATATACCTTCGATAGCTCAG....................................................................................................................................2013.003000000000000000000000001002000000000000000000000000000000000000
..............................TTGGTAGAGCGGTGGACTGTAGCGG-T-----------------........................................................................................2613.003000000000000000000000000000000000000000000000000000000000000003
....................................................................................................CATAGGTCGCTGGTTCAAAT..........................................2083.0024001002100000000010006010000004101001001000000000000000000001102
..................................TAGAGCGGTGGACTGTAGCGG-T-----------------GC......................................................................................2413.003000000000000000000000000000000000000000000000000000000000000003
.................................GTAGAGCGGTGGACTGTAGCGG-T-----------------G.......................................................................................2413.003000000000000000000000000000000000000000000000000000000000000003
....................................................CGG-T-----------------GCAAAGTGTAA----AAGTAGATT................................................................2413.003000000000000000000002000000000000001000000000000000000000000000
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................2183.0024110200020000010000001000000101011130010000000000000000000000034
....................................................CGG-T-----------------GCAAAGTGTAA----AAGTAG...................................................................2113.003000000000000010000000000001000010000000000000000000000000000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCGAA................................2973.0021000900000000000000000000021010001020030000000000000000000001010
..........................................................................GCAAAGTGTAA----AAGTAGAT.................................................................1913.003000000000020000000000000000000000000000100000000000000000000000
..........ATATACCTTCGATAGCTCA.....................................................................................................................................1913.003000001100000000000000000000100000000000000000000000000000000000
...............................TGGTAGAGCGGTGGACTGTAGCGG-T-----------------G.......................................................................................2613.003000000000000000000000000000000000000000000000000000000000000003
..................................TAGAGCGGTGGACTGTAGCGG-T-----------------GCAAAGT.................................................................................2913.003000000000000000000000000000000000000000000000000000000000000003
.......................AGCTCAGTTGGTAGAGCGGTGGACTG.................................................................................................................2672.8620100000033070000000000000013110000000000000000000000000000000000
.....................ATAGCTCAGTTGGTAGAGCGGTGG.....................................................................................................................2472.8620000022421230001000000001000001000000000100000000000000000000000
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................19192.845410202700000000000201000000000001001010000000000000000000000000000
........................................................................................................GGTCGCTGGTTCAAATCC........................................18202.755500251500010000001000200200000000200220010000000000000000000001100
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGA.............................2772.7119002001210000000000000000002010000100002000000000000000000001006
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................1982.6321038000000000000001000000000060100001000000000000000000000001000
..............................TTGGTAGAGCGGTGGACTGTAGC.............................................................................................................2322.505000000000100000000000000000000000000000000000000000000000000004
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGC.....................................2572.4317009700000000000000000000000000001000000000000000000000000000000
........................................................................................................GGTCGCTGGTTCAAATCCGGCT....................................2272.4317006100000000001101110210000001000000100000000000000000000000000
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................2072.4317001500000100000000000000000001001010020000000000000000001000130
...................................................................................................................CAAATCCGGCTCGAAGGATT...........................2032.337000000000000000000000010000100020010100000000000000000000000100
...............CCTTCGATAGCTCAGTTGGAGA.............................................................................................................................22102.30230000000000000000000000000000000010000000000000000000000201000190
...............CCTTCGATAGCTCAGTTT.................................................................................................................................18102.30230000001000000000000011013000002110100001100000000000000000000000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCT....................................2472.2916008100000000000011000010000002110000000000000000000000000000000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG...............................2872.2916002800000000001201000000000001000010000000000000000000000000000
.............................................................................................................CTGGTTCAAATCCGGCTCGAAGGAC............................2572.1415020400000100000000000000000000000000000000000000000000000000107
.......................AGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................2472.1415010000000020000000000001001100000000000000000000000000000000009
............................AGTTGGTAGAGCGGTGGACT..................................................................................................................2072.1415101000202120000000000000002101000000000000000000000000010000010
...............................TGGTAGAGCGGTGGACTGTAG..............................................................................................................2172.1415003000000000000000000020000002020000100000000000000000000000005
.....................ATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................2672.1415210002210200000000000000000000000000000000000000000000000001004
droMoj3
CTGCCGTCCATG-TGCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAACGGCAATT-------------------GC---AAGAAATAGACATCCATAGGTCGCTGGTTCGACTCCGGCTCGAAGGATTC-G---ATTT---------TT---TATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................257563.713946491215689015501532
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................286236.00141610200031311
.......................................................................................................AGGTCGCTGGTTCGACTCCGG......................................211219.0021921101151
.....................................................................................................ATAGGTCGCTGGTTCGACT..........................................191208.0020881001198
.....................................................................................................ATAGGTCGCTGGTTCGACTCCGG......................................231207.00207176113224
....................................................AACGGCAATT-------------------GC---AAGAAATAGAC.................................................................232201.5040311610002761
.....................................................................................................ATAGGTCGCTGGTTCGACTCC........................................211172.0017271021395
....................................................................................................CATAGGTCGCTGGTTCGACTCCGG......................................241166.0016616200103
................................................................................................................GTTCGACTCCGGCTCGAAG...............................191146.00146117030026
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................237109.437663288213110368
....................................................................................................CATAGGTCGCTGGTTCGACTCC........................................221108.0010858002048
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................20785.14596130451573
.....................................................................................................ATAGGTCGCTGGTTCGACTCCG.......................................22172.007213110057
.......................................................................................................AGGTCGCTGGTTCGACTCCGGCTCGAAG...............................28163.00636100020
................................................................................................................GTTCGACTCCGGCTCGAA................................18163.00635400018
.................................................................................................ATCCATAGGTCGCTGGTTCGACTCCGG......................................27160.00605701002
........................................................................................................GGTCGCTGGTTCGACTCCGG......................................20153.00534901012
.......................................................................................................AGGTCGCTGGTTCGACTCCGGCTCGAA................................27146.00464600000
......................................................................................................TAGGTCGCTGGTTCGACTCCGG......................................22144.00444020101
...............CCTTCGATAGCTCAGTTGG................................................................................................................................19739.71278159202532636
........................................................................................................GGTCGCTGGTTCGACTCCGGCTCGAAG...............................27135.00353400010
....................................................................................................CATAGGTCGCTGGTTCGACT..........................................20135.00352001032
.......................................................................................................AGGTCGCTGGTTCGACTCC........................................19234.50696200034
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................21734.0023851116290141
........................................................................................................GGTCGCTGGTTCGACTCC........................................18231.00625101019
...................CGATAGCTCAGTTGGTAGA............................................................................................................................19730.29212491491148
...............................................................................................................GGTTCGACTCCGGCTCGAA................................19126.00262600000
.................................................................................................ATCCATAGGTCGCTGGTTCGACTCC........................................25126.00262200013
......................................................................................................TAGGTCGCTGGTTCGACTCC........................................20126.00261901114
.......................................................................................................AGGTCGCTGGTTCGACTCCGGCT....................................23125.00252102020
.....................................................................................................ATAGGTCGCTGGTTCGACTC.........................................20125.002510000015
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................29623.1713950001133
...............CCTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................27721.4315071000178
..................................................................................................TCCATAGGTCGCTGGTTCGACTCCGG......................................26121.00211900011
...............CCTTCGATAGCTCAGTTG.................................................................................................................................18720.861462440363097
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................22720.14141878157123
...............................................................................................................GGTTCGACTCCGGCTCGAAG...............................20119.00191601101
.......................................................................................................AGGTCGCTGGTTCGACTCCGGC.....................................22119.00191600030
.......................................................................................................AGGTCGCTGGTTCGACTCCGGCTC...................................24118.00181500030
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................18717.4312290000131
......................................................................................................TAGGTCGCTGGTTCGACT..........................................18116.0016501109
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................24715.8611144100588
.....................................................................................................ATAGGTCGCTGGTTCGACTCCGGCT....................................25115.00151300002
.......................................................................................................AGGTCGCTGGTTCGACTCCG.......................................20115.00154010010
........................................................................................................GGTCGCTGGTTCGACTCCGGCTCGAA................................26114.00141400000
.....................................................................................................ATAGGTCGCTGGTTCGACTCCGGC.....................................24114.00141200011
........................................................................................................GGTCGCTGGTTCGACTCCG.......................................19114.0014501008
................................................................................................................GTTCGACTCCGGCTCGAAGG..............................20114.0014700115
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................19713.0091480814318
........................................................................................................GGTCGCTGGTTCGACTCCGGCTC...................................23113.00131100020
.....................................................................................................ATAGGTCGCTGGTTCGAC...........................................18113.00132000011
..............................................................................................................TGGTTCGACTCCGGCTCGAAG...............................21112.00121100001
........................................................................................................GGTCGCTGGTTCGACTCCGGC.....................................21112.0012800040
.........................................................................................................GTCGCTGGTTCGACTCCGG......................................19112.0012810021
........................................................................................................GGTCGCTGGTTCGACTCCGGCT....................................22112.00121000110
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................20711.868343054328
..............................................................................................................TGGTTCGACTCCGGCTCG..................................18111.0011900002
.................................................................................................................TTCGACTCCGGCTCGAAG...............................18111.00111000100
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................24711.007754202910
.....................................................................................................ATAGGTCGCTGGTTCGACTCCGGCTC...................................26111.0011800030
....................................................................................................CATAGGTCGCTGGTTCGACTC.........................................21111.0011600005
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................22710.867681431743
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................21710.717547236116
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................23710.5774261112421
....................GATAGCTCAGTTGGTAGA............................................................................................................................18710.147121325139
....................................................................................................CATAGGTCGCTGGTTCGA............................................18110.0010400006
....................................................................................................CATAGGTCGCTGGTTCGACTCCGGCT....................................26110.0010900100
....................................................................................................CATAGGTCGCTGGTTCGACTCCG.......................................23110.0010200008
..................................................................................................TCCATAGGTCGCTGGTTCGACTCC........................................24110.0010700012
....................................................................................................CATAGGTCGCTGGTTCGACTCCGGC.....................................2519.009800010
.........................................................................................................GTCGCTGGTTCGACTCCGGC.....................................2019.009310050
...............CCTTCGATAGCTCAGTTGGAGA.............................................................................................................................2278.71610000061
..................................................................................................TCCATAGGTCGCTGGTTCGACT..........................................2218.008300005
...............CCTTCGATAGCTCAGTTGGTAGAGCGTG.......................................................................................................................2877.57531000052
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................2077.004923336014
.........................................................................................................GTCGCTGGTTCGACTCCGGCTCGA.................................2417.007700000
......................................................................................................TAGGTCGCTGGTTCGACTCCGGCTCGAA................................2817.007700000
.....................ATAGCTCAGTTGGTAGAGCGGTGGA....................................................................................................................2567.004211700177
.................................................................................................ATCCATAGGTCGCTGGTTCGACT..........................................2317.007200005
.................................................................................................ATCCATAGGTCGCTGGTTCG.............................................2017.007400021
.....................................................ACGGCAATT-------------------GC---AAGAAATAGAC.................................................................2226.50131000030
...............CCTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................2766.50392910018
.......................................................................................................AGGTCGCTGGTTCGACTC.........................................1826.0012900003
......................................................................................................TAGGTCGCTGGTTCGACTC.........................................1916.006200004
...................................................................................................................CGACTCCGGCTCGAAGGA.............................1816.006300201
..................................................................................................TCCATAGGTCGCTGGTTCG.............................................1916.006410001
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................1975.43385040029
.........................................................................................................GTCGCTGGTTCGACTCCG.......................................1815.005300110
.........................................................................................................GTCGCTGGTTCGACTCCGGCT....................................2115.005310010
.................................................................................................................TTCGACTCCGGCTCGAAGGA.............................2015.005400100
..........................................................................................................TCGCTGGTTCGACTCCGG......................................1815.005500000
..............................................................................................................TGGTTCGACTCCGGCTCGA.................................1915.005300101
......................................................................................................TAGGTCGCTGGTTCGACTCCG.......................................2115.005200003
.................................................................................................ATCCATAGGTCGCTGGTTCGACTCCGGC.....................................2815.005500000
...............CCTTCGATAGCTCAGTTGT................................................................................................................................1974.71333000012
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2274.57323000002
.............................GTTGGTAGAGCGGTGGAC...................................................................................................................1864.50274000167
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................1964.00242001021
......................................................................................................TAGGTCGCTGGTTCGACTCCGGCTC...................................2514.004200020
..................................................................................................TCCATAGGTCGCTGGTTCGACTCCG.......................................2514.004200002
.................................................................................................ATCCATAGGTCGCTGGTTCGAC...........................................2214.004300001
..................................................................................................................TCGACTCCGGCTCGAAGGAC............................2024.008402101
..............................................................................................................TGGTTCGACTCCGGCTCGAAGG..............................2214.004200002
..................................................................................................................TCGACTCCGGCTCGAAGGA.............................1914.004200002
......................................................................................................TAGGTCGCTGGTTCGACTCCGGCT....................................2414.004400000
....................................................................................................CATAGGTCGCTGGTTCGAC...........................................1914.004100003
.........................................................................................................GTCGCTGGTTCGACTCCGGCTCG..................................2314.004400000
.........................................................................................................GTCGCTGGTTCGACTCCGGCTCGAAG...............................2614.004400000
....................................................AACGGCAATT-------------------GC---AAGAAATAGA..................................................................2224.008400031
..............................................................................................................TGGTTCGACTCCGGCTCGAA................................2014.004400000
.............................................................................................................CTGGTTCGACTCCGGCTCGAAG...............................2214.004200002
.........................................................................................................GTCGCTGGTTCGACTCCGGCTC...................................2214.004400000
............................AGTTGGTAGAGCGGTGGA....................................................................................................................1863.832310110011
.................................................................................................ATCCATAGGTCGCTGGTT...............................................1873.43241800051
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................2173.1422621364
........................................................................................................GGTCGCTGGTTCGACTCCGGCTCG..................................2413.003300000
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................2173.00210101118
................CTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................2763.00181200006
............................AGTTGGTAGAGCGGTGGAC...................................................................................................................1963.0018801063
.................................................................................................ATCCATAGGTCGCTGGTTCGA............................................2113.003201000
.......................................................................................................AGGTCGCTGGTTCGACTCCGGCTCG..................................2513.003300000
..................................................................................................................TCGACTCCGGCTCGAAGG..............................1813.003100002
..........................................................................................................TCGCTGGTTCGACTCCGGCTC...................................2113.003000030
..................................................................................................TCCATAGGTCGCTGGTTCGACTC.........................................2313.003010011
...................................................................................................CCATAGGTCGCTGGTTCGACTCCGG......................................2513.003300000
.................................................................................................ATCCATAGGTCGCTGGTTCGACTCCG.......................................2613.003300000
..............................................................................................................TGGTTCGACTCCGGCTCGAAGGA.............................2313.003200001
......................................................................................................TAGGTCGCTGGTTCGACTCCGGCTCG..................................2613.003300000
......................................................................................................TAGGTCGCTGGTTCGACTCCGGC.....................................2313.003200010
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................2072.86201011710
...........................CAGTTGGTAGAGCGGTGGA....................................................................................................................1962.3314500108
.................TTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................2762.17131200001
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................1972.14151100103
droGri2
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGAGT-G--ATTT------------------ACTA-AAGATATAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATTGTA---ATCA---------TT---TTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
C---------------CTTCGATAGCTCAGTTG.................................................................................................................................1812152.33182818199
C---------------CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2311139.911539631908
................................................................................................................GTTCAAATCCGGCTCGAAG...............................198102.38819331488
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................21899.38795658137
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................19866.135295227
...................CGATAGCTCAGTTGGTAGA............................................................................................................................191156.73624167457
C---------------CTTCGATAGCTCAGTTGG................................................................................................................................191253.3364056872
................................................................................................................GTTCAAATCCGGCTCGAA................................18847.75382209173
C---------------CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................251045.00450222228
.................................................................................................ATCCATAGGTCGCTGGTT...............................................18844.883593581
........................................................................................................GGTCGCTGGTTCAAATCC........................................18835.252822802
C---------------CTTCGATAGCTCAGTTGGTA..............................................................................................................................211133.9137328093
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................211131.73349114235
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................20825.3820319013
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................201124.3626851217
..................................................................................................TCCATAGGTCGCTGGTTC..............................................18823.001841840
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................23822.5018014634
....................GATAGCTCAGTTGGTAGA............................................................................................................................181122.2724518560
.............................................................................................................CTGGTTCAAATCCGGCTC...................................18822.251781780
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20821.3817112744
C---------------CTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................241120.4522517451
C---------------CTTCGATAGCTCAGTTGGTAG.............................................................................................................................221117.2719014743
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................20814.8811910811
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................19814.631171170
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................22814.381158332
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................19813.751106545
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................221113.091449351
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................20812.751025349
.............................................................................................................CTGGTTCAAATCCGGCTCGAAG...............................22812.63101974
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22811.63937419
.............................................................................................................CTGGTTCAAATCCGGCTCGAA................................21810.75866620
.............................................................................................................CTGGTTCAAATCCGGCTCG..................................19810.38836815
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................191110.361144767
....................................................................................................................AAATCCGGCTCGAAGGAC............................18910.3393876
..............................................................................................................TGGTTCAAATCCGGCTCGA.................................1989.25741955
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................1988.2566633
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................2087.5060573
........................................................................................................GGTCGCTGGTTCAAATCCG.......................................1987.5060564
.............................................................................................................CTGGTTCAAATCCGGCTCGAAGG..............................2386.8855469
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................18116.55726111
.............................................................................................................CTGGTTCAAATCCGGCTCGAAGGA.............................2486.38513318
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................22115.82643727
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................2485.6345432
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20105.40541539
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................20115.3659509
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................20115.18573225
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................2185.13412417
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................2184.8839372
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................2584.6337361
...................CGATAGCTCAGTTGGTAG.............................................................................................................................18114.5550491
.................................................................................................................TTCAAATCCGGCTCGAAG...............................1884.5036351
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................2784.5036360
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC...................................2684.2534331
................CTTCGATAGCTCAGTTGG................................................................................................................................18124.1750491
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................2084.13331815
............................................................................................................GCTGGTTCAAATCCGGCTCGAAG...............................2384.1333330
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................2284.1333321
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................2084.00321913
................CTTCGATAGCTCAGTTGGTA..............................................................................................................................20113.5539354
.....................................................................................................ATAGGTCGCTGGTTCAAA...........................................1883.50281810
C---------------CTTCGATAGCTCAGTTGGT...............................................................................................................................20123.4241338
.............................................................................................................CTGGTTCAAATCCGGCTCGA.................................2083.3827198
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................1983.3827252
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................24103.3033312
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................19113.2736315
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................2183.25261412
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................1883.2526251
...............................................................................................................GGTTCAAATCCGGCTCGAA................................1983.0024204
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................23103.0030282
..............................................................................................................TGGTTCAAATCCGGCTCG..................................1883.0024204
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................21102.90291118
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................21112.82311813
............................................................................................................GCTGGTTCAAATCCGGCTCG..................................2082.6321210
..................................................................................................................TCAAATCCGGCTCGAAGG..............................1882.6321147
.................................GTAGAGCGGTGGACTGTA...............................................................................................................1872.5718117
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................19102.30231310
............................................................................................................GCTGGTTCAAATCCGGCTCGAAGGAC............................2682.2518180
................CTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................23112.1824222
..................................................................................................TCCATAGGTCGCTGGTTCAAATCC........................................2482.1317161
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................2182.1317116
................................................................................................................GTTCAAATCCGGCTCGAAGGAC............................2282.1317107
........................................................................................................GGTCGCTGGTTCAAATCCGGCTC...................................2382.1317170
.............................................................................................................CTGGTTCAAATCCGGCTCGAAGGAC............................2582.0016124
............................................................................................................GCTGGTTCAAATCCGGCTCGAAGG..............................2482.0016160
......................................................................................................TAGGTCGCTGGTTCAAATCCG.......................................2182.0016133
...............................................................................................................GGTTCAAATCCGGCTCGAAGG..............................2181.8815105
...................................................................................................................CAAATCCGGCTCGAAGGA.............................1881.881578
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................19111.8220128
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCG..................................2481.6313130
...........................CAGTTGGTAGAGCGGTGGA....................................................................................................................1971.571138
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................2081.5012111
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................2781.5012120
..................TCGATAGCTCAGTTGGTA..............................................................................................................................18111.4516160
......................................................................................................TAGGTCGCTGGTTCAAAT..........................................1881.3811110
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................2681.3811110
.................TTCGATAGCTCAGTTGGT...............................................................................................................................18121.2515150
...............................................................................................................GGTTCAAATCCGGCTCGAAGGA.............................2281.251082
..........................................................................................................TCGCTGGTTCAAATCCGG......................................1881.2510100
...................................................................................................CCATAGGTCGCTGGTTCA.............................................1881.2510100
..............................................................................................................TGGTTCAAATCCGGCTCGAAGGA.............................2381.251028
..................................................................................................................TCAAATCCGGCTCGAAGGA.............................1981.251055
.........................................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG...............................2681.2510100
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................22101.201284
C---------------CTTCGATAGCTCAGTTGGTAGC............................................................................................................................23111.1813013
C---------------CTTCGATAGCTCAGTTGGTAGG............................................................................................................................23111.1813112
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................1981.13990
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCT....................................2581.13981
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA................................2681.13990
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................2481.13981
...............................................................................................................GGTTCAAATCCGGCTCGA.................................1881.13981
.................................................................................................................TTCAAATCCGGCTCGAAGG..............................1981.13954
....................................................................................................CATAGGTCGCTGGTTCAAATCCG.......................................2381.13954
................CTTCGATAGCTCAGTTGGTAG.............................................................................................................................21111.0912111
....................................GAGCGGTGGACTGTAGAGT-G--ATTT------------------.................................................................................2411.00110
.................................................................................................ATCCATAGGTCGCTGGTTCAAATC.........................................2481.00880
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC...................................2781.00880
..............................................................................................................TGGTTCAAATCCGGCTCGAAGG..............................2281.00853
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCG..................................2780.88770
................................................................................................................GTTCAAATCCGGCTCGAG................................1880.88734
...........................CAGTTGGTAGAGCGGTGGACT..................................................................................................................2170.86624
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2380.75660
............................................................................................................GCTGGTTCAAATCCGGCTCGAA................................2280.75651
..................................................................................................TCCATAGGTCGCTGGTTCAAAT..........................................2280.75660
............................................................................................................GCTGGTTCAAATCCGGCTC...................................1980.75660
........................................................................................................GGTCGCTGGTTCAAATCCGGCT....................................2280.75660
............................................................................................................GCTGGTTCAAATCCGGCTCGAAGGA.............................2580.75660
C---------------CTTCGATAGCTCAGTTGGTAGT............................................................................................................................23110.73808
............................AGTTGGTAGAGCGGTGGA....................................................................................................................1870.71523
............................AGTTGGTAGAGCGGTGGAC...................................................................................................................1970.71523
................................................................................................CATCCATAGGTCGCTGGTTC..............................................2070.71550
C---------------CTTCGATAGCTCAGTTGT................................................................................................................................19120.67853
C---------------CTTCGATAGCTCAGTTGGG...............................................................................................................................20120.67880
C---------------CTTCGATAGCTCAGTTGGA...............................................................................................................................20120.67826
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................2280.63550
..............................................................................................................TGGTTCAAATCCGGCTCGAAGGAC............................2480.63523
.........................................................................................................GTCGCTGGTTCAAATCCG.......................................1880.63550
...................................................................................................................CAAATCCGGCTCGAAGGAC............................1980.63532
........................................................................................................GGTCGCTGGTTCAAATCCGGC.....................................2180.63550
.........................................................................................................GTCGCTGGTTCAAATCCGGCTC...................................2280.63550
.............................GTTGGTAGAGCGGTGGACT..................................................................................................................1970.57431
...........................CAGTTGGTAGAGCGGTGGACTGTA...............................................................................................................2470.57422
droAna3
CTTCCG--T---GGACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGACG-GTGGTTGA----------GAA------AACA-G-CGCGGATATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAAT-TA---CTTT---------TT---TTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................GTTCAAATCCGGCTCGAA................................188567.50454044252352183583435
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................258434.883479153183217383739499
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................238414.38331568194491562262622
................................................................................................................GTTCAAATCCGGCTCGAAG...............................198269.7521584401543790595842
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................218257.8820638142787971830
...............CCTTCGATAGCTCAGTTGGAGA.............................................................................................................................22994.568511700083751
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................22891.637333924545810548
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................21888.0070412530922136229
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................28885.636851670047615
...................CGATAGCTCAGTTGGTAGA............................................................................................................................19861.63493214192429405
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................20858.5046810657205370
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................20850.254024031223360
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................19849.6339714224110004
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22845.0036076112111014137
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................21843.633497520659036
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................20842.3833984176122659
....................GATAGCTCAGTTGGTAGA............................................................................................................................18838.25306593495244
........................................................................................................GGTCGCTGGTTCAAATCC........................................18837.6330191143210145
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................23832.7526269149220418
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................20832.0025658202811157
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................29831.5025201817174142
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20831.2525070111310155
...............CCTTCGATAGCTCAGTTGG................................................................................................................................19831.1324957526503081
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................18827.502201111415386
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................23826.382115143933120
................................................................................................................GTTCAAATCCGGCTCGAG................................18824.001921070013666
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................22823.6318911932412121
...............................................................................................................GGTTCAAATCCGGCTCGAA................................19823.381879119213953
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................21823.1318511361519995
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................21823.13185441201013106
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................21822.75182256042145
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................19821.6317371371154
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................24820.2516214681571741
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................19819.75158581132579
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................20819.251546710144329
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27818.5014860816001
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................18818.38147431011128
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................25817.8814346960001
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................20817.751423577190011
...............................................................................................................GGTTCAAATCCGGCTCGAAGGA.............................22816.3813171031119
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................20816.251303643051018
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................22816.2513033828025
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................22816.1312981191001
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................20815.251226015261029
...............CCTTCGATAGCTCAGTTG.................................................................................................................................18815.25122223976012
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................20813.3810790102500
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24813.1310539602013
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................21812.751022928841221
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................19811.008827528001
...............CCTTCGATAGCTCAGTTGGTAGG............................................................................................................................23810.758620033645
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG...............................28810.008019600001
................................................................................................................GTTCAAATCCGGCTCGAAGGACC-..........................231110.00110492400730
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20810.0080144681110
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................2189.8879144130147
.............................................................................................................CTGGTTCAAATCCGGCTCGAAGGACC-..........................2689.75782730102
.........................................................................................................GTCGCTGGTTCAAATCCGGC.....................................2089.25742711000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................2789.257421530000
...................CGATAGCTCAGTTGGTAG.............................................................................................................................1889.13730223066
.................................................................................................................TTCAAATCCGGCTCGAAG...............................1889.00725125167
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................1988.7570321228214
......................................................................................................TAGGTCGCTGGTTCAAATCCGGC.....................................2388.63697610001
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................2488.50683641000
................................................................................................................GTTCAAATCCGGCTCGAAGGAC............................2288.386729502526
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2488.136513471040
...........................................................................................................CGCTGGTTCAAATCCGGCTCGAAGGACC-..........................2887.50601540005
........................................................................................................GGTCGCTGGTTCAAATCCGGC.....................................2187.38594513001
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTC...................................2487.38595531000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................2286.885517132329
.................................................................................................ATCCATAGGTCGCTGGTTCATCC..........................................2386.635311420000
...............................................................................................................GGTTCAAATCCGGCTCGA.................................1886.635340100300
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGC.....................................2886.63532510000
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................1986.38513665310
.................TTCGATAGCTCAGTTGGTAGG............................................................................................................................2186.25501003838
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCTC...................................2586.255010382000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................2686.134920281000
.....................................................................................................ATAGGTCGCTGGTTCATC...........................................18105.90598000249
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................1985.88471226333
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................2185.75460121141
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC...................................2685.25424370001
........................................................................................................GGTCGCTGGTTCAAATCCGGCTC...................................2385.00403322003
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................1985.004001622317
....................................................ACG-GTGGTTGA----------GAA------AACA-G-CGCGGAT.................................................................2615.005220001
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................1985.004018181003
..................................................................................................TCCATAGGTCGCTGGTTCAAATCC........................................2484.88399290001
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2384.883912233001
..............................................................................................................TGGTTCAAATCCGGCTCGAAGGA.............................2384.75384112228
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCTC...................................2784.50364320000
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGC.....................................2584.50363320010
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................2084.383518101015
.........................................................................................................GTCGCTGGTTCAAATCCGGCT....................................2184.25349241000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGACC-..........................2984.25340330010
........................................................................................................GGTCGCTGGTTCAAATCCG.......................................1984.253411450014
...............CCTTCGATAGCTCAGTTGGTAGAGCGTG.......................................................................................................................2884.13331200228
...............CCTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................2784.133313000614
...............................................................................................................GGTTCAAATCCGGCTCGAAGG..............................2184.13336001323
.............................................................................................................CTGGTTCAAATCCGGCTCGAA................................2184.003215110141
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2284.00323181064
...............................................................................................................GGTTCAAATCCGGCTCGG.................................1883.88312900200
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................2083.88311473007
.................TTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................2783.88311100128
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAAG...............................2983.75300290001
..............................................................................................................TGGTTCAAATCCGGCTCGA.................................1983.75301270191
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCT....................................2483.753011140032
........................................................................................................GGTCGCTGGTTCAAATCCGGCT....................................2283.632910181000
.............................GTTGGTAGAGCGGTGGAC...................................................................................................................1883.50282400319
...............................................................................................................GGTTCAAATCCGGCTCGAG................................1983.50282400130
.........................CTCAGTTGGTAGAGCGGT.......................................................................................................................1883.50280000028
...............................................................................................................GGTTCAAATCCGGCTCGAAGGAC............................2383.50286910012
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................1983.25261150217
...............CCTTCGATAGCTCAGTTGGAG..............................................................................................................................2183.13252110003
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2283.1325751138
......................................................................................................TAGGTCGCTGGTTCAAATCCG.......................................2183.00241410027
.............................................................................................................CTGGTTCAAATCCGGCTC...................................1883.00241230000
...............CCTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................2783.00248400111
.............................................................................................................CTGGTTCAAATCCGGCTCGAAG...............................2283.002411120001
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGGCTC...................................2983.00240230001
....................................................................................................CATAGGTCGCTGGTTCATC...........................................1992.89262000024
.................TTCGATAGCTCAGTTGGT...............................................................................................................................1882.8823053708
...............CCTTCGATAGCTCAGTTGT................................................................................................................................1982.88231200641
............................AGTTGGTAGAGCGGTGGA....................................................................................................................1882.88230010022
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGCT....................................2982.75221210000
..............................................................................................................TGGTTCAAATCCGGCTCGAG................................2082.75221700140
droBip1
TCGACG--CTCGTCACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTGA-GAGATTCGGGTGCAATA--------GC---ACAGAGCAGGCATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATTAAA---CTTT---------TT---TATSizeHit CountTotal NormTotal
No Reads
droKik1
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGCTG-GATATT----------------------T----AAGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCA-----TTTT---------TT---TCASizeHit CountTotal NormTotal
No Reads
droFic1
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATC-GGAATT-------------------GC---AATAAGTAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCAGG---TTTT---------TT---TATSizeHit CountTotal NormTotal
No Reads
droEle1
CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAAA-------CATGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TTTTG------TT---TTTSizeHit CountTotal NormTotal
No Reads
droRho1
CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AA-A-------CATGCAAAAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TTT--------TG---TTTSizeHit CountTotal NormTotal
No Reads
droBia1
CCCGGG--TTTTCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAGA-------CAAGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TT---TGTSizeHit CountTotal NormTotal
No Reads
droTak1
CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAGA-------CATGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT--------------TTGSizeHit CountTotal NormTotal
No Reads
droEug1
AGCCCT-CAACGACCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATG-GCAAAT---------CGACGC------AA----CAGCAGTGATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGAA-------GTTT---------TT---TTTSizeHit CountTotal NormTotal
No Reads
dm3
CCCCCA--C---CAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------CAAA-------CAAGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TTTTTCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................25101362.40136240000000000100000000008634000000000000601537273412251961115334443041130100032200000000000000000000001035321022311083768291711178410240425121208031600021151000119396578032892414013145634979285321012381802015219671325420200000120010283002000084317313091801000041151974250197323611952268268000000031441971361431309113387191942276318332860000507548111201515341171430012359020013000211118347010000003103325271118681215578137514416986211181114517500274768376611157204180681421414420210148790220214
...............CCTTCGATAGCTCAGTTG.................................................................................................................................18101298.80129880000000000000000000102026727501000000000163026921831161029184113411738000000000000000000000001023000221247171612462510121044303031133425001001672400014402453921925600133000000017757788030273132167522011000000112810730103761115074100683564871990802016620301578955716170021211372100000241000000002830104210675228201113410102500100007320413728021010500118877223249105549912836250393454000000031311340235345100245881105214237267104125201120110832000001100400431913312733000
....................................................TTG-G-----------------CAAA-------CAAGCAATAGAA.................................................................2011272.0012720000000000000000000001400010010000023700105121210271115020004390000000000000000044282329013211911120000020300000001040400050020000000000001000000032004613010316692222770000040000031020001001000500700005050000000000000020300002011032611985131213534217152416120000010000000000220011031100101100300002000000002111000420200721631020010241990000000000000002002400010
...............CCTTCGATAGCTCAGTTGG................................................................................................................................19101131.30113130000000000000000000002525517030000000008120983611253059778192844292161421864333032000000000000000000000000101000250623462307615421044357131930321032016901027340211212127243313000001015215716291854138238192321140000010045512141501230081910432333822010461015215400028042351000013331905000510513817990276843673697269269326661021100001631663111428551212121216154218159154661223177103712412414200020102196105221511111229607194427255603173113110452144111107161512151316321663121131183883245027181727811
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................219640.2257620000001011301000000002251600000000000116411320271037042641361172812000001000000000000000000000000020001251213130263518146324610013035350012030000000000000010178139280239925417047188740673813334161300000000000670300050003010000000252242600051470110382000000000010993113732076765856208194640200100007206000001011015000002000000010000011000000000000013226467627012221046519620670022382118000000000002391921401119007110
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................199483.56435200000000000000000000056517000000000008038751324310603313352101000011000000000000000000000010000001831121136204614312003001000000700000000010000110001003819252825538391928223365330173022000000000002101000103010100000001030423300702600000450000000001776725112664121204626119610010000100000000211500000000000000000002300000000000002122084336012966842371013003028414500010000000145111934315004000
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................2010411.404114000011500014200150000000000410000000000000000001020000000000000100000000000000000110031410808720494853406172821620013897280349853179937122063614231860110000010000000000000000000300000100000000000000098080008010106000000295010006050000000000000005048562321121003411212200300006102001100101030112000000100011131000001001100010000962102000000020200100000000000100001003010010
....................................................TTG-G-----------------CAAA-------CAAGCAATAGA..................................................................191323.00323000000000000000000000100000003000000121000440010010311000010000000000000000001841001010000000000100000000000000000020100000000000000000000012250120211000000000000000000021000204000600000004030000000001000000100000020106612455131647258000001100000000001200214000000010140210004000100000110021000011446000000675000000000000100000300010
................................................................................................................GTTCAAATCCGGCTCGAA................................1810242.20242200000000000000000000003300000000000061965090009221010510000000000000000000000001000000000009103011240158000001000001000130101010110000220000002980643318846134321272500000040013035010018211030150030001015161126100901626000002200050010023110411612241616317100100001922161000021040100010100100001000130000000010000330117841797558632762691812962101691131220000000001021112314459311032110
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................2310228.6022860000000000000000000001270000000000003274311210946411200002310000000000000000010000001012211560660747134819000010014307020500002010001023323830291012447193612527231772625200000000001204020003100100101300085312020231231012116160018002017151579530232415246451000000000039160710000104002003173110312000001020000000000011714155557968494761110191313300165410363675171132181281491219124213310
................................................................................................................GTTCAAATCCGGCTCGAAG...............................1910192.80192800000000000000000000000100000000000020301032201005001000000000000000000000000000001002000396082028181152390400400250510140280100110200000000000002169211356915352004000000000009100900190101020000300847216000001000000010004001002172594611221400000000141703000000106001001000010100001014000000000000001338956142130311314301381349317510353671051002130005811181136231133051300
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................229186.0016740000000000000000000002398000000000006128861141119026013198441000000000000000000000000000000000000410400110080000000000000000000001010000010101710710018791972618294932492559121511000000000003202000300020400000003133900010040000031900000000072309251694742615797006000000010000074170000000000000000000300100000000000201032012901826268110010013221560000000000066569261015000
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................1910174.60174600000000000000000000000230000000000002010002000001010100000000000000000000000000001102427515882521031376065679184105271281223270358926810292267000000000000010023000000101000010100000000000000000102000100000000000003203000400000000000000000002013341110180816000010005101000110100026000021000061202100000000000020100100568001300000000100000000000000000201000010
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................1910160.9016090000000000000000000000041900000000000001211000100020100000000000000000000000004022180000332510152174167837813618181952292471131131641106802100000001000001727000003041060000100000000000000001214010002610100500000025402000610000000000000000006113998123111701820010000790300012110201100000000010100212001000001000000101491712001011001221201000000000000000014110010
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................2810156.701567000000000000000000000002000000000000010100013001110030000221028000000000000000000000000000000000000000000000000000000000000000000000000001002003410034430000320000000000000000003000000000000000020000100000001000000300010171329531612477120120111000091001000000101000101001000000000001000000000000000002582300014000100300002001011206511121103500000
...................................................................................................................CAAATCCGGCTCGAAGGATT--------...................205130.40652000000000000000000000101000000000000310001651212423411000000000000000000000007101090100411500010000000020090257950020400000000000000000030000001310522443202020000016004100130200020101030043000813110003014000000100000001071097791263917719500300000050025320024143230515414132516113215117000000006020926222110302101110000311513102130010010300231840
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................2010125.20125200000000000000000000042200000000000044632071408057125100091100000000000000000000000100010010030021002200010000100000002000000010000024002000227129125932318236274611000000000110010001000004000000021021400000213000000700220002013371718687419463100210003601100112172800100300000100000000002000000000013053931090313619341121008130252130021112012591942110101013000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................239120.001080000000000200000001000114000000000000101054037130714421620001100000000000000000000000200000010100023652100100000030001000500010110000000100960026203493522151912271460000000000023040001010301500000001124000000000000320000000002230595571413745182051200150000110000000400800000102000000000003000000000100000000483102350140001202579000000000003731765018000
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................1910112.1011210000000000000000000001000000000000001211040022131031300000110000000000000000000000000000000000000001100000000100100000020000000000100490012520855516815211311340542000000000001752050003001202000000011301000513000000000001003101611670021000030001000713420200034421130010100002000000010020100010002001031327631232815001114037222473001100000001514821112700000
....................................................TTG-G-----------------CAAA-------CAAGCAATAGAAA................................................................211109.0010900000000000000000000000000000000000000000011001100101000001000000000000000000110100002200000000000000000000100001000000000000000000000613000023640120100032000000000000000000000000000000000200000000000000010000000001000511065314000300001000000000010000000000000000000000000000000000000002000000115000000411000000000000000000000000
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20996.338670000000000001000000001010000000000004280003001802302110000000000000000000000000000000000101701132786011115220010003000000010000000000000110313001719572919812620415064000001000000204000101000100000002203000010500001010020000003651916152652191652100001000002000000002010000000000000000000000000000000113011337300039734002210205210001000000013429070117420
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................241095.209520000000000000000000003130000000000008020333105456030230000140000000000000000000000060000000400210318626000001010103030020200000001001493018621812691399872193280000007000011000005021100000000011241401412000002700020000062415632852192858291093201000007151000010030100111000000310000008200001100020210010411500102380015002021320162212010009322242615120
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................221091.1091100000000000000000000000010200000000012831117233011100000000000000000000000000000001001010191050023313519110000000022130601000000000000014930144019205144410653421000000000000021020003002001000000153370103026000006300000012058910151579631501700000000191303001103210900026003131460220240100010000000133240230171510112591003101230125204113092239133551332310
...................................................................................................................CAAATCCGGCTCGAAGGATT--------T..................21587.0043500000010000001000000030000000000000000210010410011216020000000000000000000000015460701113430140003000206202019313331004031600000000000000000010000031100122030002000000000090020000000000010000000511000010020000014000000100980273784427000100000131002010010143320112811055427601000000001131301001100003101000010110400100000000001100012220
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................201082.5082500000000000000000000002200100000000204114141300111271021000000000000000000000000120010041000000000211621763035800000232170300000000001032254200002119400310659133010000000001020010001000000205000021130102021200000210000063024122461011131650289134000020621016110403033440030131310125641030000000041111301103141112516131706133116397626651383412610324412149
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................291082.4082400000000000000000000000000000000000000000000000000010100022112100000000000000000012000000000000000000000000000000000000001000000000000000002000000000000001001000000000000002000150000100000000000600100200000000121000000002511473455140000000001210000000110300000000000000000000000000000000100000017201000142001300000110000010201865066050000100
.............AACCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................26576.00380000000000000000000000010000000000000400030103041311020000100000000000000000000000000002000000010000000000000000000000000000000000000000000018161387312117605770000000000000010000000100000000001007010120500000513002000000234210225714600010000000200000000000010020020200100101100000000000010000140000171861600000041411012002020100102211320100
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................211074.107410000000001000000000001110000000000002130010121610010100001080000000000000000000000000000002000000112832000000000002000010000001000000100050009251339129520208200000000000001020010001000000001005330003020000001540010000043241916517431921220000301001600200262300401000030210100101000000001001020222272151424621394176211164614121243801125149392304110
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG..............................261073.0073000000000000000000800001000000000000001044013001000020000000000000000000000000000000000000000000000000000000000000000000000000000007748120119491577151801002910200000000000000000000000020300001000000400200010000000021200000000110512841724016111100000000000000000000000000000000001000000000000000000000000000100000100001010000000000000001000000
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22972.446520000020003110000000001031000000000001040001200300320000000100000000000000000000000000000051981137135183318412604000051117280370010000020000000002110000540301000030020000000000032060000000402000000003100000011000001000000000005011141656261272800000000100200000210100000000000000000000000000000000000010041514023734108100401000000010009034763000000
....................................................................................................CATAGGTCGCTGGTTCATCC..........................................201167.367410000030002311000000000000000000000000000000000000000000000000000000000000000000000401201024766304424011554533293220900220350184402100000000000000000000000000000000000000000000000000010100001000000000000010000000000000000000000000040000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................TCCATAGGTCGCTGGTTC..............................................181061.406140000000000000001000000101100000000000020100010201010100000000000000000000000001001120030021821200161242413481062033731474781475220850000000000100000151200000000000200000000000000000000010000031001000000000025200030000010300000000000345500120100000000004601000000000010000000000000001100000000000000100100212001000000000100000000000000000000000004
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................191061.306130000000000000000000003220000000000004052001150502511200003000000000000000000000000000000002001001100020100010000000000000000000000000000000047571611537251082021140000000000001001000000020000000001200000000000000000001000001734223032701600000000010000010210170000010000001100001000000000000020102106210081862210000023893020000000001013141203110
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................181060.006000000000000000000000000000000000000000015201100000000010000202000000000000000000000000000000010000200010000000001000000060000010100000000000130171020013010700000000000000082201000010004000000000150110012130000010100000000032940001000300000000171501000002002000000000000000000001010000000000046270226020000005980000500000000000182016916126221100000
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................19958.11523000000000000000000000000000000000000000000110000000000000100000000000000000000000000040137152315817757403711140300135282223114240000000010010000000000000110000000000000000000000040060001212000300000000100000000000000000000000001611492285113000000003100000000003020000000000000000000000000000000000000311000000000000000000000000000000100000000
.....................................................................................................ATAGGTCGCTGGTTCATCC..........................................191855.4499800000000000000000000000000000000000001010000101022100000000000000000000000000000001002105201233909397100953921125410700080123610050170000000000000000000010000521820023002030000000000000000000101010000000001102000000000000470000000001160011924336320000000000000000001000000000000000000000000000000000000000100000000002000100000000000000000111012001000
.....................ATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................261054.105410000000000000000000000000000000000002130021120123000110000000000000000000000000000000000000000000000000000000000000000000000000000000000100001020131111528400000000000010000000000020000000000000000000000032000100100156154134323700000000000001001000051210000000100000000000000000021003010231322501592501110128324296103314261400522116810792240
..................TCGATAGCTCAGTTGGTAGAGCGGTGG.....................................................................................................................271053.6053600000000000000000000000000000000000021301010100120003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101004036305210300000000000000000000000000000000001000000000000001000000000744571335277100200000200000000011001100101001100000000000000001210100104030010320261170002003613971410142360431221036410000
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................211052.1052100000000000000000000031110000000000010010012105000330000000000000000000000000000000000010030141122181744000010000001000010000000010001101400200041020416340636400000000000002000000011002100000014130001010100015430000005047906202340340200000015700201100601110101001120000100111000000000003400105202833203505003000260528011110102610111350140
...................CGATAGCTCAGTTGGTAGA............................................................................................................................191048.70487000000000000000000000101000000000000100000000001100000000220000000000000000000000000000000000010101722420001000020110501000000000000000000000049519402210010030000000000000020001000000000000010140001006000000000000000011614142020041000000023814000000205400010100100000000000000000000000020222679301902161410220031112200202000109353211004010
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................20948.44436000002000000000000000010100000000000000100100110211010000001000000000000000000000200000012104050623814111214700000003012020020010000010000000000100051142550300110000000000000100200000100021000000130100000100100001000000000142131342711773000000000420100001200900000000000000000000000000000000010000051110001306300101637000000000000003611013000
........................................................................................................GGTCGCTGGTTCAAATCC........................................18946.00414000000000000000000000000000000000000000010000000000000000000000000000000000000000030021015101101311452433937219150021793930602200000000001000000000000000201100000000000000000000000500060000010000000001200000000000000000000000020123243214000000001202000001002000000000000000000000000000000000000000541000000000100010000000000000000102025000
.............AACCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................27546.00230000000000000000000000000000000000000200020012001200010000000000000000000000001110000000000000000000000000000000000000000000000000012130061003120024410006110000000000000000000000000200000000000000000301030200000000021301262518561712000000100000010000101000000001101010000100000000100000000930000314590100001713001000001101000200500000
............................AGTTGGTAGAGCGGTGGAC...................................................................................................................191045.70457000000000000000000000110000000000000100052200002001021000000000000000000000000000000040000010000100000201030110000100100000000000100000000000000012323015020000000000010000000000100000001000010000000000000100000030026155841125617310030000400100010000111100000000020000000000000000110010001173443031054102400261717032401325514129200827422003
...............CCTTCGATAGCTCAGTTGT................................................................................................................................191043.90439000000000000000000000131002000000000172120214025909101722000000000000000000000000000000000003040000100015400000000000000000000000000010010000000011002030220380000000000000100000000000000000003215000002300000020000000015176211545501403000000000110000000000000000110010000010010000000000000020000193228014800010000211100000000100000100000000
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................221043.5043500002000000000000000021200000000000030420011203003000000000000000000000000000000001000001001000010002200001000000000010000000000000041202621112276360491261002010000000000510010000100000000000020130000005000001300000000063205053201311001000061111000002304001001000300000000020000000001000200001493002113180004003975301000000004431321500010
.................................................................................................ATCCATAGGTCGCTGGTTCATCC..........................................231043.00430000004000202300000000000000000000000000000000000000000000000000000000000000000000040082206603504317274223514222210000012277070300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................201041.704170000000000000000000001100000000000001002001100500000000000050000000000000000000000000001022202106210104000000000300002000000000000000000000000139343023520116000000000000001000001000000000001012010000012000000100000000024552502321081001000037190400020210500020100010110000001000000000000000011126340076200131101332401010010000700100604000
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.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGG..............................3599.7888000000000000000000000000000000000000000000000000000000000766150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TCCGGCTCGAAGGATT--------TT---------TT......2059.60480000000000000000000000000000000000010000000000000110000000000000000000000000000000200011000000000000000000000000000000000000000000000000000000000010000000300000000100000000000000000010000010000000000000000000000100500002332131000000000000000000000000000100000000000000000000000000000000000000111000000121001000000000000000210010
...................................................................................................................CAAATCCGGCTCGAAGGA.............................18109.3093000000000000000000000000000000000000000001000001000000000000000000000000000000100000000000000000000000000200000000000000000000000000151400001002000200000000000000000000000000000200000000000000000020000000000000000100014004050103200100001110010000000010001001000000000000000000002100000000002200000000100101000001010101211001200000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGC.....................................2399.22830000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000001825002100010000000000000000000000000002000101000000000000000000000000101000000000000100022321012000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000200
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................2299.11820000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000010000000000000000200010100000101316000100000000000000000000000000000100000100000100000000000000001000000000000000000000211410026000000000001000000000011000000000000000000000000000000000000110000000000000000000000000000000000000000
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................2199.008100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000012103000000001000100000000001000000002000000010430010010000000000000000100000010000200000000100000000000000000000000000100230022201000000001000100000000000000000000000000000000100000000000100213000000000010100601000000101100100000430
............................................GACTGTAGTTG-G-----------------CAAA-------CAAGCAATA....................................................................2519.0090000000000000000000001000000000000001000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000030000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACCTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................2959.004500000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010030110000000000000000000000000000000000000000000000000000000100000003000020000000000000221602001000201300000
.................................................................................................ATCCATAGGTCGCTGGTTCATC...........................................22109.0090000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000322013006810450000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000100000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGCT....................................2999.00810000000000000000000000010000000000000001000000000000000001750000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000231201400011001060000000000000000000000000000000000000011020010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCT....................................2598.898000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000002077001101312000201000000000000000002102000010000100000000000000000000000000000000000000213620016000000001010000000000000000010000000000000000000000000000000411001100000000100100000000000000000000000
.........................CTCAGTTGGTAGAGCGGTGG.....................................................................................................................20108.708700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000000000100000000010000000000000000000000000000010000000001000000000000000000000000002105400312122000000010000010010000202000100100000000000000000000000000040000010011000000111304000142001010201610210
...............................................................................................................GGTTCAAATCCGGCTCGAAGG..............................21108.70870000000000000000000000010000000000080000000001000010000000000000000000000000000000000000001100000000010001000000000000000000100000000100000000100210010000000000000000000000000000000000000000000000000000001000000000021011012210130000000041000000000000000000000000000000000000000000000001002100000020010002030000000000012000010001000
droSim2
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATT-GGGATT-------------------ACGA----ATGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCGGA---AAAT---------TT---TTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................ATT-GGGATT-------------------ACGA----ATGTAGAC.................................................................211306.0030642800082201224100000
C---------------CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2510226.8022681865512376217206342231620820112000
C---------------CTTCGATAGCTCAGTTG.................................................................................................................................1810114.7011474424111714321211469800001
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG...............................281099.00990000970101000000000000
C---------------CTTCGATAGCTCAGTTGGTAGA............................................................................................................................231055.6055618513921171893239147161400000
................................................................................................................GTTCAAATCCGGCTCGAAG...............................191050.90509662362967010000022700000
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................211046.3046300140700310005100000
C---------------CTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................241042.104210102690243703140811000
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................291035.703570171830100020001900000
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................201033.603364219962104012003202000
C---------------CTTCGATAGCTCAGTTGG................................................................................................................................191025.602562201227457141045682310000
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................211025.60256462924844000300131700000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................271024.202420002420000000000000
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................281024.1024124419118901003801000
..................................................................................................................TCAAATCCGGCTCGAAGGA.............................191023.2023220009014000000000000
................................................................................................................GTTCAAATCCGGCTCGAA................................181022.002201828950201142092000004
........................................GGTGGACTGTAGATC-..........................................................................................................15920.2218200000057125000000000
....................................................ATT-GGGATT-------------------ACGA----ATGTAGA..................................................................20119.0019000000613000000000
C---------------CTTCGATAGCTCAGTTGGTAG.............................................................................................................................221018.20182506493654101061904001
...................................................................................................................CAAATCCGGCTCGAAGGA.............................181017.4017430001304000001000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................221015.6015628152114030150017601000
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................191015.1015100213901000000000000
....................................................................................................CATAGGTCGCTGGTTCAA............................................181015.1015100011302000000000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................231014.6014611090100310033700000
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................191013.901390215279000094100000
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................201013.8013800011600000002200000
......................TAGCTCAGTTGGTAGA............................................................................................................................161013.3013300000035421487000000
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................221013.1013116302539010000001001000
C---------------CTTCGATAGCTCAGTTGGTA..............................................................................................................................211012.9012930395418163122504000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAAG...............................291012.801280101260000000100000
C---------------CTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................271011.701170001150010001000000
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................201011.7011750213390000004900000
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................201211.6714053734662202000100000
C---------------CTTCGATAGCTCAGTTGGT...............................................................................................................................201011.50115001845361000121100001
........................GCTCAGTTGGTAGAGC..........................................................................................................................161011.401140000000000114000000
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................211011.401140003902001000000000
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................181010.7010717661250000006100000
C---------------CTTCGATAGCTCAGTTGGTAGAGCG.........................................................................................................................261010.301030003365454001000000
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................191210.251231211298332210002500000
........................GCTCAGTTGGTAGAGCA.........................................................................................................................172010.202040000000002202000000
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................221010.0010020063645000011000000
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................231010.0010000354189000021400000
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................21109.909953222899243121100000
.......................AGCTCAGTTGGTAGA............................................................................................................................15109.409400000091729363000000
.................................................................................................................TTCAAATCCGGCTCGAAG...............................18109.009032105410000007400000
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................20108.708722360273140030000000
.....................ATAGCTCAGTTGGTAGA............................................................................................................................17108.408400000073511922000000
C---------------CTTCGATAGCTCAGTTGGTAGAGCGTG.......................................................................................................................28108.2082002800000000000000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA................................27108.10810007101000000000000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCGAA................................29108.1081000780021000000000
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................19128.08973024444400000000000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27107.8078020710020000300000
...............................................................................................................GGTTCAAATCCGGCTCGAA................................19107.707700013303000004000000
.......................AGCTCAGTTGGTAGAGCA.........................................................................................................................18207.551510000000001150000000
..............................................................................................................TGGTTCAAATCCGGCTCGAAGGA.............................23107.30730000004722220000000
.....................................................................................................ATAGGTCGCTGGTTCAAA...........................................18107.0070000460004002000000
................................................................................................................GTTCAAATCCGGCTCGAAGGAC............................22126.928346152000000001000100
............................AGTTGGTAGAGCGGTGGAC...................................................................................................................19106.90692739000000024123000
.................................................................................................................TTCAAATCCGGCTCGAAGGA.............................20106.9069100360010003100000
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................22106.6066306899000022900000
...............................................................................................................GGTTCAAATCCGGCTCGAAGGA.............................22106.40642201200318000000000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAA................................26106.20620005201000000000000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................26106.1061000510003050200000
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................18106.00602211630001000800000
....................................GAGCGGTGGACTGTAGATC-C.........................................................................................................2046.0024133000031001012000
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................19105.9059100560000000200000
........................................................................................................GGTCGCTGGTTCAAATCC........................................18105.9059014510000000300000
...................CGATAGCTCAGTTGGTAGA............................................................................................................................19105.80582057918020011400000
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................22105.70570004700000001000000
.......................AGCTCAGTTGGTAGAGC..........................................................................................................................17105.7057000000000057000000
.......................AGCTCAGTTGGTAGAGCG.........................................................................................................................18105.5055000050000005000000
......................TAGCTCAGTTGGTAGAGC..........................................................................................................................18105.20521104100002033100000
..............................TTGGTAGAGCGGTGGACTGTAGATC-C.........................................................................................................2635.0015000000121100001000
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................19105.0050420300260030003000
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................20105.00502202910011001400000
.....................................................TT-GGGATT-------------------ACGA----ATGTAGAC.................................................................2015.00500000032000000000
....................GATAGCTCAGTTGGTAGA............................................................................................................................18104.9049009900590131300000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAGG..............................29104.9049000490000000000000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................25104.9049001460000000200000
..................................................................................................TCCATAGGTCGCTGGTTC..............................................18124.75573223222200102000000
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................21104.6046023718900004300000
C---------------CTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................27104.60460012700410012010000
.................................................................................................ATCCATAGGTCGCTGG.................................................16124.42530000002311649000000
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................20104.40446611180000000300000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCG..................................25104.30430002320000000000000
...................................................................................................................CAAATCCGGCTCGAAGGAT............................1994.1137321100000003000000
....................................................ATT-GGGATT-------------------ACGA----ATGTAGACATCC.............................................................2514.00400400000000000000
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................19104.00401205120000001100000
...........................................................................................................CGCTGGTTCAAATCCGGCTCGAAGGA.............................26104.00400000202000000000000
C---------------CTTCGATAGCTCAG....................................................................................................................................15113.8242000000020832000000
.........................................................................................................GTCGCTGGTTCAAATCCGGCTCGAAG...............................26103.8038000380000000000000
............................AGTTGGTAGAGCGGTGGACTG.................................................................................................................21103.7037000000020010034000
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20103.6036000318000009600000
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................21103.60360001710000301500000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATC.........................................24103.40341002102000010000000
.....................ATAGCTCAGTTGGTAGAGCA.........................................................................................................................20153.2749000000000049000000
.............................GTTGGTAGAGCGGTGGAC...................................................................................................................18103.2032808000000013111000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAG...............................25103.10310008101000002100000
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................20103.0030000320000004300000
...................................................................................................................CAAATCCGGCTCGAAGGATC...........................2013.00310001100000000000
.....................................AGCGGTGGACTGTAGATC-..........................................................................................................1853.001561010025000000000
.............................................................................................................CTGGTTCAAATCCGGCTCGAAGGA.............................24103.00300001001811000000000
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24102.9029000280000000100000
.................................................................................................................TTCAAATCCGGCTCGAAGGAC............................21122.8334191700001023001000
...............................................................................................................GGTTCAAATCCGGCTCGAAGGAC............................23122.7533138400070000010000
.........................CTCAGTTGGTAGAGCA.........................................................................................................................16202.70540000000251334000000
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................20102.7027000230000002101000
..............................TTGGTAGAGCGGTGGACTGTAGATC-..........................................................................................................2532.67800000022000013000
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................20102.6026025610000000300000
.....................ATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................26102.5025121000000015600000
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................19102.502500119900001400000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCC........................................24102.5025000220011100000000
................CTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................28102.4024000230000000100000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAA................................28102.4024000240000000000000
...............................TGGTAGAGCGGTGGACTGTAGATC-C.........................................................................................................2532.33700000022200001000
..................................................................................................................TCAAATCCGGCTCGAAGG..............................18102.30230000101000002100000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................22102.2022000190012000000000
......................TAGCTCAGTTGGTAGAGCA.........................................................................................................................19202.1543000000000142000000
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................24102.1021001140020004000000
.............................GTTGGTAGAGCGGTGGA....................................................................................................................17102.1021000000110019000000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGA.............................27102.1021000102000000000000
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................21102.102100019000009200000
.....................ATAGCTCAGTTGGTAGAGCG.........................................................................................................................20102.002000009900002000000
......................................................T-GGGATT-------------------ACGA----ATGTAGAC.................................................................1912.00200000002000000000
.....................................................TT-GGGATT-------------------ACGA----ATGTAGACATCC.............................................................2412.00200200000000000000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG..............................26102.0020000201001007000000
.....................................................................................................................AATCCGGCTCGAAGGA.............................16202.0040000000002038000000
..............................TTGGTAGAGCGGTGGAC...................................................................................................................17102.0020000000010019000000
.....................ATAGCTCAGTTGGTA..............................................................................................................................15102.002000000018290000000
...................................AGAGCGGTGGACTGTAGATC-C.........................................................................................................2132.00600100003000002000
...............................................TGTAGATT-GGGATT-------------------ACGA----ATGTAGAC.................................................................2612.00200000000000011000
...................................................GATT-GGGATT-------------------ACGA----ATGTAGACAT...............................................................2412.00200200000000000000
....................................................ATT-GGGATT-------------------ACGA----ATGTAGACA................................................................2212.00200000002000000000
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................19101.9019101400000004000000
........................GCTCAGTTGGTAGAGCG.........................................................................................................................17101.9019000000000019000000
..................TCGATAGCTCAGTTGGTA..............................................................................................................................18101.901960210004005100000
.....................................................................................................ATAGGTCGCTGGTTCA.............................................16121.8322000000411205000000
.........................................................................................................GTCGCTGGTTCAAATCCGGCT....................................21101.8018000200000016000000
..............................................................................................................TGGTTCAAATCCGGCTCGAAGG..............................22101.8018000100310101110000
....................GATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................27101.8018001200000002400000
........................GCTCAGTTGGTAGAGCC.........................................................................................................................17101.8018000000000018000000
............................AGTTGGTAGAGCGGTGGA....................................................................................................................18101.8018100100000012004000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................23101.7017000160000000100000
..............................TTGGTAGAGCGGTGGA....................................................................................................................16101.7017000000000017000000
...................................................................................................................CAAATCCGGCTCGAAGGAC............................19201.7034271400000000200000
.................................................................................................ATCCATAGGTCGCTGGT................................................17121.6720000000230015000000
.............................GTTGGTAGAGCGGTGGACTG.................................................................................................................20101.6016000000100000015000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCG..................................24101.6016000130000003000000
.........................CTCAGTTGGTAGAGC..........................................................................................................................15101.6016000000100015000000
.......................AGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................24101.601621500000005300000
...................CGATAGCTCAGTTGG................................................................................................................................15101.6016000000014101000000
..................................................................................................TCCATAGGTCGCTGGT................................................16121.5819000000000118000000
C---------------CTTCGATAGCTCAGTTGGAGA.............................................................................................................................22111.5517000100014002000000
C---------------CTTCGATAGCTCAGG...................................................................................................................................16111.4516000000020014000000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTC...................................24101.4014000140000000000000
........................GCTCAGTTGGTAGAG...........................................................................................................................15101.4014000000000014000000
..................................................................................................................TCAAATCCGGCTCGAAGGAC............................20151.4021154200000000000000
........................GCTCAGTTGGTAGAGCGGT.......................................................................................................................19101.4014000001000004000000
droSec2
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGATT-GGGATT-------------------ACGA----ATGTAGACATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATCGGA---ATAT---------TT---TTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
C---------------CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2510863.408634606392029041204
................................................................................................................GTTCAAATCCGGCTCGAAG...............................199192.331731400923248160
C---------------CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2310111.40111435162256661
C---------------CTTCGATAGCTCAGTTGGTAGG............................................................................................................................2310106.2010620631053
C---------------CTTCGATAGCTCAGTTG.................................................................................................................................181083.1083161691133
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................201077.3077386424677
................................................................................................................GTTCAAATCCGGCTCGAA................................18968.3361511637286176
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................21965.225874004311628
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................21951.334621078076199
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................211048.80488663256163
C---------------CTTCGATAGCTCAGTTGGTAG.............................................................................................................................221047.904794956173201
C---------------CTTCGATAGCTCAGTTGG................................................................................................................................191043.90439361031281
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................201041.70417114530655
..................TCGATAGCTCAGTTGGTAGG............................................................................................................................201041.60416110414
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................23937.89341168458444
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................22934.11307432616222
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................231033.603364710516816
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................181028.00280261141112
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................281025.20252281719710
...................CGATAGCTCAGTTGGTAGA............................................................................................................................191024.6024653811786
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................221023.2023231317046
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................19922.782051902130
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................191022.302239517534
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................191021.702177213195
C---------------CTTCGATAGCTCAGTTGGAGA.............................................................................................................................221121.18233102853142
C---------------CTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................241020.40204133112436
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................20918.7816935414548
....................GATAGCTCAGTTGGTAGA............................................................................................................................181018.60186319389
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................20918.0016249453236
C---------------CTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................291016.901690102661
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................19916.331472130690
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................20916.1114546582021
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20915.6714111171796
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................211015.201522281184
C---------------CTTCGATAGCTCAGTTGGTA..............................................................................................................................211014.901499123593
.................................................................................................................TTCAAATCCGGCTCGAAG...............................18914.891343737321
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................241014.601466432455
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................20914.111276410458
.................TTCGATAGCTCAGTTGGTAGG............................................................................................................................211013.50135010134
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................191013.101310810914
...................CGATAGCTCAGTTGGTAG.............................................................................................................................181013.00130009832
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................22912.8911669102710
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22911.3310217192442
C---------------CTTCGATAGCTCAGTTGGTAGAGCGTG.......................................................................................................................281010.70107039662
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27910.6796707145
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................221010.501053212160
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................20109.8098434492
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................21109.7097051379
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAG...............................2599.448540810
...................CGATAGCTCAGTTGGTAGG............................................................................................................................19109.309300192
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20109.00901215315
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................1999.0081916947
...............................................................................................................GGTTCAAATCCGGCTCGAA................................1998.33751521939
C---------------CTTCGATAGCTCAGTTGGT...............................................................................................................................20108.3083435422
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................20108.108107668
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG..............................2697.446701651
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................19107.4074200477
....................GATAGCTCAGTTGGTAGG............................................................................................................................18107.107100071
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................1996.8962255257
...............................................................................................................GGTTCAAATCCGGCTCGAAGGA.............................2296.4458109534
........................................................................................................GGTCGCTGGTTCAAATCC........................................1896.4458390154
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................2096.22561561223
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................2196.2256714278
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC............................28106.206201610
C---------------CTTCGATAGCTCAGTTGGTG..............................................................................................................................21105.305300053
...............................................................................................................GGTTCAAATCCGGCTCGAAGG..............................2195.224732537
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................2695.224739251
....................................................ATT-GGGATT-------------------ACGA----ATGTAGAC.................................................................2115.0052030
C---------------CTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................27104.8048194232
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................2794.674238130
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG...............................2894.333929721
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................1894.2238121178
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................2494.003627441
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................2193.7834117511
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA................................2793.673332010
C---------------CTTCGATAGCTCAGTTGGG...............................................................................................................................20103.6036100260
C---------------CTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................27103.6036202140
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................2093.5632921110
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................19102.9029110180
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTC...................................2492.672421201
..................TCGATAGCTCAGTTGGTA..............................................................................................................................18102.602620123
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................2592.562317132
.....................................................................................................ATAGGTCGCTGGTTCAAA...........................................1892.562334511
..........................TCAGTTGGTAGAGCGGTGGA....................................................................................................................20102.502561351
...........................CAGTTGGTAGAGCGGTGGA....................................................................................................................19102.502549102
...............................................................................................................GGTTCAAATCCGGCTCGAAGGG.............................2292.442200022
C---------------CTTCGATAGCTCAGTTGGAG..............................................................................................................................21102.402422101
...............................................................................................................GGTTCAAATCCGGCTCGAAGGAC............................23102.402431119
................................................................................................................GTTCAAATCCGGCTCGAG................................1892.332111118
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCG..................................2592.332120010
.....................................AGCGGTGGACTGTAGATC-..........................................................................................................1832.3370106
......................................................................................................TAGGTCGCTGGTTCAAATCCG.......................................2192.22203539
........................................................................................................GGTCGCTGGTTCAAATCCG.......................................1992.22206158
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................22102.20229067
.................................................................................................................TTCAAATCCGGCTCGAAGGA.............................2092.111941311
C---------------CTTCGATAGCTCAGTTGGC...............................................................................................................................20102.102110191
.....................................................TT-GGGATT-------------------ACGA----ATGTAGACATCC.............................................................2412.0020020
.................................................................................................................TTCAAATCCGGCTCGAAGG..............................1992.00185364
....................................GAGCGGTGGACTGTAGATC-C.........................................................................................................2032.0060123
............................AGTTGGTAGAGCGGTGGA....................................................................................................................18102.00203494
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2392.001813104
......................................................................................................TAGGTCGCTGGTTCAAAT..........................................1892.001831410
C---------------CTTCGATAGCTCAGTTGGCC..............................................................................................................................21101.901900190
....................GATAGCTCAGTTGGTAGAGCGGTGG.....................................................................................................................25101.901912133
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................2491.891710331
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCT....................................2491.891711105
....................................................................................................CATAGGTCGCTGGTTCAAAT..........................................2091.891704112
....................................................................................................CATAGGTCGCTGGTTCAAATCCG.......................................2391.891712311
C---------------CTTCGATAGCTCAGTTGGTC..............................................................................................................................21101.701720150
..........................TCAGTTGGTAGAGCGGTG......................................................................................................................18101.70178045
................................................................................................................GTTCAAATCCGGCTCGAAGGG.............................2191.671500015
...........................................................................................................CGCTGGTTCAAATCCGGCTCGAAG...............................2491.671500132
.................TTCGATAGCTCAGTTGGT...............................................................................................................................18101.601600124
droYak3
CCCGAG--TTCCCAACCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAAA-------CGAGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TT---------TT---GCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2591101.1199101349754527624698297800064
................................................................................................................GTTCAAATCCGGCTCGAAG...............................1910422.3042232117153893339270010
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................239168.5615172847330153912740000
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................219103.449312624247138550000
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................23994.1184702437022424250000
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................29978.56707303029006450000
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................211045.3045301691604626700000
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................211041.30413137013215541740000
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................201040.90409115256093530000
................................................................................................................GTTCAAATCCGGCTCGAA................................181040.3040326013512322790000
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................22937.0033303483511242210000
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................20933.783041117769151850000
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................191028.90289010317620260000
...............CCTTCGATAGCTCAGTTGGAGA.............................................................................................................................221028.802880000002880000
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................221028.302833247413661480000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................231028.10281166872931940000
...................CGATAGCTCAGTTGGTAGA............................................................................................................................191028.002801113173112340000
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................24925.56230056138600300000
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................21925.3322817559581430000
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................28924.56221071060016700031
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................201024.5024518431011005680000
........................................................................................................GGTCGCTGGTTCAAATCC........................................181018.70187164107150000000
...............CCTTCGATAGCTCAGTTGG................................................................................................................................19918.561670945181313240000
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................201018.501850110331211280000
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20918.0016206374271060000
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................191017.30173035112164420000
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................20916.56149025113620840000
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................24916.00144040272203520000
...............CCTTCGATAGCTCAGTTGGTAGAGCGTG.......................................................................................................................28915.441390030001360000
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................221014.80148050341704430000
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................19914.6713207125532170000
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................21914.11127152113513420000
....................................................TTG-G-----------------AAAA-------CGAGCAATAGAA.................................................................20114.001403710210000
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................22914.0012602153502720000
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................211013.1013109120071030000
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................181012.901297105604610000
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2299.56860742111340000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27109.409404827200170000
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24108.708706115010100000
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................20107.8078156814440000
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................20107.7077022532630000
...............................................................................................................GGTTCAAATCCGGCTCGAA................................19107.40740157122470000
............................................GACTGTAGTTG-G-----------------AAAA-------CGAGC........................................................................2117.00700600010000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................22106.90690155400000000
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20106.40649326001160000
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................27106.20620481310000000
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................19106.20620381330170000
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................20106.10610412001440000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................26105.805812218120140000
....................GATAGCTCAGTTGGTAGA............................................................................................................................18105.50550901717210000
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTGGA....................................................................................................................3195.2247000000000047
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG...............................28105.1051005000010000
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................20105.00500192003260000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................25104.80480172700130000
...................................................................................................................CAAATCCGGCTCGAAGGATT--------T..................2144.2517210021200000
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................19104.2042137002110000
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................18104.20421171810050000
.................................................................................................................TTCAAATCCGGCTCGAAG...............................18104.00400164314120000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTC...................................24103.90390102900000000
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................19103.70371210000150000
...........................CAGTTGGTAGAGCGGTGGA....................................................................................................................19103.6036013000320000
..........................TCAGTTGGTAGAGCGGTGGA....................................................................................................................20103.6036002000340000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................22103.5035191112170003
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................24103.40340101920020001
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................19103.4034216311290000
.....................................................................................................ATAGGTCGCTGGTTCATCC..........................................19163.31535227200170000
...............CCTTCGATAGCTCAGTTG.................................................................................................................................1893.2229031810610000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGC.....................................23103.2032282100010000
....................................................TTG-G-----------------AAAA-------CGAGCAATAGA..................................................................1913.00301001010000
................................................................................................................GTTCAAATCCGGCTCGAAGGA.............................21103.0030012002250000
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................1992.672407513350000
............................AGTTGGTAGAGCGGTGGAC...................................................................................................................19102.6026121700060000
............................AGTTGGTAGAGCGGTGGA....................................................................................................................18102.5025101002210000
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................21102.4024081101130000
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................19102.4024037000140000
....................................................................................................CATAGGTCGCTGGTTC..............................................16102.3023000000000023
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................20102.2022012710110000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGCTCGAAG...............................29102.2022001700050000
.................................................................................................................TTCAAATCCGGCTCGAAGGA.............................20102.202208500090000
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................23102.2022016400020000
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................19102.1021120512100000
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGC.....................................28102.1021001810020000
..................................................................................................TCCATAGGTCGCTGGTTCAAATCC........................................24102.1021061220010000
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................20102.102117530050000
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2292.0018070000110000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC...................................26102.0020051220010000
...........................................GGACTGTAGTTG-G-----------------AAAA-------CGAGC........................................................................2212.00201010000000
.....................ATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................2692.0018501120000000
...............CCTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................2792.0018012000150000
....................................................................................................CATAGGTCGCTGGTTCATCC..........................................20141.93271210000140000
........................................................................................................GGTCGCTGGTTCAAATCCGGC.....................................21101.9019011800000000
...............CCTTCGATAGCTCAGTTGGTAGAGG..........................................................................................................................2591.8917001520000000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGG..............................26101.8018010000000017
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA................................27101.8018015200010000
...............................................................................................................GGTTCAAATCCGGCTCGAAGG..............................21101.8018033001110000
.................TTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................2791.7816000100150000
..................................TAGAGCGGTGGACTGTAGTTG-G-----------------AAA.....................................................................................2541.75700000000007
........................................................................................................GGTCGCTGGTTCAAATCCGGCTC...................................23101.7017015100100000
................................GGTAGAGCGGTGGACTGTAGTTG-G-----------------A.......................................................................................2551.60800000000008
.................................................................................................ATCCATAGGTCGCTGGTTCATCC..........................................23101.6016011500000000
...................................................................................................................CAAATCCGGCTCGAAGGATT--------...................2051.60862000000000
..............................................................................................................TGGTTCAAATCCGGCTCGA.................................19101.6016012000040000
..................................................................................................TCCATAGGTCGCTGGTTC..............................................18101.501502921100000
..........................................................................................................TCGCTGGTTCAAATCCGGCTCGAAGGAC............................28101.5015003000000012
...................CGATAGCTCAGTTGGTAG.............................................................................................................................18101.501517002410000
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTGG.....................................................................................................................3091.4413000000130000
...............CCTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................2791.441304510030000
.................................................................................................................TTCAAATCCGGCTCGAAGG..............................19101.401407011050000
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................21101.401400250070000
....................GATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................2791.331201800030000
....................................................................................................CATAGGTCGCTGGTT...............................................15101.3013000000000013
droEre2
CCCCAG--CACGCCCCCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGTTG-G-----------------AAA------AACATGCAATAGAAATCCATAGGTCGCTGGTTCAAATCCGGCTCGAAGGATT--------TTTTGTCGAATTT---TTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............CCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................259831.2274811198120921477512642711110
................................................................................................................GTTCAAATCCGGCTCGAAG...............................198206.7516544743610567942840
.................TTCGATAGCTCAGTTGGTAG.............................................................................................................................209201.561814312181496961620
.....................................................................................................ATAGGTCGCTGGTTCAAATCC........................................218187.381499500268161021344790
...............CCTTCGATAGCTCAGTTGGTAGA............................................................................................................................239186.331677247182534251676030
.......................................................................................................AGGTCGCTGGTTCAAATCCGG......................................218151.631213228455144618650
................................................................................................................GTTCAAATCCGGCTCGAA................................188134.131073171132255882740
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGG......................................238121.009683691643183462030
...............CCTTCGATAGCTCAGTTGGTAG.............................................................................................................................229119.6710771013127641552220
.......................................................................................................AGGTCGCTGGTTCAAATCC........................................198118.139455333392469160
.................TTCGATAGCTCAGTTGGTAGA............................................................................................................................219102.33921324273662122620
....................................................................................................CATAGGTCGCTGGTTCAAATCC........................................22898.507882821011231423200
........................................................................................................GGTCGCTGGTTCAAATCC........................................18877.506203141971743310
.................TTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................23964.33579522704107108380
...............CCTTCGATAGCTCAGTTGG................................................................................................................................19962.11559185848612412923
.................TTCGATAGCTCAGTTGGTAGAG...........................................................................................................................22962.11559524238974650
....................................................................................................CATAGGTCGCTGGTTCAAATCCGG......................................24857.38459381451113180
...................CGATAGCTCAGTTGGTAGA............................................................................................................................19952.0046822108158332370
......................................................................................................TAGGTCGCTGGTTCAAATCC........................................20851.5041215610523542720
........................................................................................................GGTCGCTGGTTCAAATCCGG......................................20848.38387869501739240
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTG......................................................................................................................29942.223807562144117540
....................GATAGCTCAGTTGGTAGA............................................................................................................................18939.563561764133221740
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGG......................................27839.0031210614502818150
.....................................................................................................ATAGGTCGCTGGTTCAAAT..........................................19933.7830471060122150
......................................................................................................TAGGTCGCTGGTTCAAATCCGG......................................22833.63269877106712320
.....................ATAGCTCAGTTGGTAGAG...........................................................................................................................18931.6728517600831790
...............CCTTCGATAGCTCAGTTGGTAGAG...........................................................................................................................24929.56266503669330510
...............CCTTCGATAGCTCAGTTGGTAGAGCGGT.......................................................................................................................28929.0026197711345899
..................TCGATAGCTCAGTTGGTAGA............................................................................................................................20928.00252181410201990
...............CCTTCGATAGCTCAGTTGGTA..............................................................................................................................21927.672495015225320890
...............CCTTCGATAGCTCAGTTGGAGA.............................................................................................................................221026.8026834000401940
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAAG...............................28826.632131872000330
.....................................................................................................ATAGGTCGCTGGTTCAAATC.........................................20926.0023451824231460
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCC........................................25825.132016613300110
.....................ATAGCTCAGTTGGTAGAGCGGTGGA....................................................................................................................25925.00225146421826533
.....................................................................................................ATAGGTCGCTGGTTCATCC..........................................191124.91274517710131320
................CTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................24923.1120813933046260
.....................ATAGCTCAGTTGGTAGAGC..........................................................................................................................19922.8920683231980640
.....................................................................................................ATAGGTCGCTGGTTCAAATCCG.......................................22822.881838541326640
..................................................................................................TCCATAGGTCGCTGGTTCAAATCCGG......................................26821.881755596018150
.........................................................................................................GTCGCTGGTTCAAATCCGG......................................19821.751742311301711100
...............CCTTCGATAGCTCAGTTGGT...............................................................................................................................20921.56194282166614590
..............................................................................................................TGGTTCAAATCCGGCTCGAAG...............................21820.88167372832444310
...............................................................................................................GGTTCAAATCCGGCTCGAAG...............................20820.50164472722329360
.................................................................................................ATCCATAGGTCGCTGGTTCA.............................................20820.3816394152301390
........................................................................................................GGTCGCTGGTTCAAATCCGGCTCGAAG...............................27819.751581451200010
............................................GACTGTAGTTG-G-----------------AAA------AACATGC........................................................................22116.00161602520
....................GATAGCTCAGTTGGTAGAGC..........................................................................................................................20915.6714122333232490
...................CGATAGCTCAGTTGGTAGAGC..........................................................................................................................21915.3313853273617410
...............CCTTCGATAGCTCAGTTGGTAGAGCGTG.......................................................................................................................28913.33120070070430
............................................GACTGTAGTTG-G-----------------AAA------AACATGCA.......................................................................23113.00131000840
.......................................................................................................AGGTCGCTGGTTCAAATCCGGC.....................................22812.63101296503220
................................................................................................................GTTCAAATCCGGCTCGAAGG..............................20811.8895458023820
...............CCTTCGATAGCTCAGTTG.................................................................................................................................18911.671052702310630
.................................................................................................................TTCAAATCCGGCTCGAAG...............................18811.13894730614190
...............................................................................................................GGTTCAAATCCGGCTCGAA................................19811.138935121522140
.................................................................................................ATCCATAGGTCGCTGGTTC..............................................19810.758628272143120
....................................................................................................CATAGGTCGCTGGTTCATCC..........................................201010.501053314014530
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGC.....................................24810.1381333305550
..................TCGATAGCTCAGTTGGTAG.............................................................................................................................1999.8989903163580
...............CCTTCGATAGCTCAGTTGGTAGG............................................................................................................................2399.788820218750
..............................................................................................................TGGTTCAAATCCGGCTCGAA................................2089.13732890217170
..................................................................................................TCCATAGGTCGCTGGTTCAAATCC........................................2489.1373116001100
.......................................................................................................AGGTCGCTGGTTCAAATCCG.......................................2088.757026801310130
......................................................................................................TAGGTCGCTGGTTCAAATC.........................................1998.56772120315360
...................CGATAGCTCAGTTGGTAGAG...........................................................................................................................2098.007204158270
.................................................................................................................TTCAAATCCGGCTCGAAGG..............................1987.756251203510
.......................................................................................................AGGTCGCTGGTTCAAATC.........................................1897.44671323022360
...................CGATAGCTCAGTTGGTAG.............................................................................................................................1897.3366620110470
...............CCTTCGATAGCTCAGTTGGTAGAGCGT........................................................................................................................2797.2265521001110
.................................................................................................ATCCATAGGTCGCTGGTTCATCC..........................................2387.005684601010
.....................................................................................................ATAGGTCGCTGGTTCATC...........................................1896.786160006490
...................................................................................................................CAAATCCGGCTCGAAGGATT--------...................2046.752717030340
.................TTCGATAGCTCAGTTGGTA..............................................................................................................................1996.56595602311140
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTC...................................2486.1349182802010
...........................................GGACTGTAGTTG-G-----------------AAA------AACATGC........................................................................2316.0060202020
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCT....................................2385.634530603060
........................................................................................................GGTCGCTGGTTCAAATCCG.......................................1985.6345282012210
...................CGATAGCTCAGTTGGTAGG............................................................................................................................1995.444901100470
...............CCTTCGATAGCTCAGTTGGTAGAGCGG........................................................................................................................2795.444941101510
........................................................................................................GGTCGCTGGTTCAAATCCGGC.....................................2185.3843112903000
.................TTCGATAGCTCAGTTGGT...............................................................................................................................1895.0045350230140
.....................................................................................................ATAGGTCGCTGGTTCAAA...........................................1894.8944900210230
......................................................................................................TAGGTCGCTGGTTCAAATCCG.......................................2184.8839221006100
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCT....................................2584.633727511030
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGC.....................................2584.633727900100
...................................................................................................................CAAATCCGGCTCGAAGGATT--------T..................2144.501815000012
.......................................................................................................AGGTCGCTGGTTCAAATCCGGCTCGAA................................2784.503634100010
..................................................................................................TCCATAGGTCGCTGGTTCA.............................................1984.503622314420
....................GATAGCTCAGTTGGTAGAG...........................................................................................................................1994.4440141812140
................CTTCGATAGCTCAGTTGGTAGA............................................................................................................................2294.4440201053110
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCG.......................................2684.383520202560
.........................................................................................................GTCGCTGGTTCAAATCCGGC.....................................2084.383572701000
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTC...................................2684.2534112101010
....................................................................................................CATAGGTCGCTGGTTCAAATC.........................................2194.223852013270
...............................................TGTAGTTG-G-----------------AAA------AACATGCA.......................................................................2014.0041101100
........................................................................................................GGTCGCTGGTTCAAATCCGGCT....................................2284.003225103030
...................................AGAGCGGTGGACTGTAGTTG-G-----------------A.......................................................................................2234.001200000012
..............CCCTTCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2624.0083400010
..................TCGATAGCTCAGTTGGTAGAGC..........................................................................................................................2293.89358912780
...............CCTTCGATAGCTCAGTTGGAG..............................................................................................................................2193.893533000020
...............CCTTCGATAGCTCAGTTGGTAGAGCGGTGG.....................................................................................................................3093.783400000034
.....................................................................................................ATAGGTCGCTGGTTCAAATCCGGCTCGAA................................2983.632951700520
....................................................................................................CATAGGTCGCTGGTTCAAATCCG.......................................2383.6329140001140
.................................................................................................ATCCATAGGTCGCTGGTTCAAATCCGGC.....................................2883.632932600000
......................................................................................................TAGGTCGCTGGTTCAAATCCGGC.....................................2383.6329121203020
...............................TGGTAGAGCGGTGGACTGTAGTTG-G-----------------........................................................................................2543.501400000014
........................................................................................................GGTCGCTGGTTCAAATCCGGCTC...................................2383.382714502006
....................................................................................................CATAGGTCGCTGGTTCAAAT..........................................2093.333080201190
.................TTCGATAGCTCAGTTGGTAT.............................................................................................................................2093.002700027000
..............................TTGGTAGAGCGGTGGACTGTAGTTG-G-----------------A.......................................................................................2733.0090000009
.......................AGCTCAGTTGGTAGAGCGGTGGACTGTAG..............................................................................................................2993.002700000027
..................TCGATAGCTCAGTTGGTAGG............................................................................................................................2093.002700200250
...........................................GGACTGTAGTTG-G-----------------AAA------AACATGCA.......................................................................2413.0030002010
..................................................................................................TCCATAGGTCGCTGGTTCATCC..........................................2282.882332000000
............................AGTTGGTAGAGCGGTGGA....................................................................................................................1892.78252302990
.................TTCGATAGCTCAGTTGGTAGG............................................................................................................................2192.782510011220
.....................ATAGCTCAGTTGGTAGAGCGGTGGAC...................................................................................................................2692.782501000420
..................TCGATAGCTCAGTTGGTAGAG...........................................................................................................................2192.782510114540
....................................................................................................CATAGGTCGCTGGTTCAAATCCGGCT....................................2682.63218400090
.........................................................................................................GTCGCTGGTTCAAATCCG.......................................1882.63217402260

Generated: 05/17/2015 at 11:51 PM