ID:

dps-mir-317

 Coordinate:

2:5030001-5030090 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.2 -35.2 -35.2

Flybase annnotation

utr5 [utr5_plus_10125]; pre_miRNA [Dpse\mir-317-RM]; miRNA [Dpse\miR-317-RA]

No Repeatable elements found

Sense Strand Reads

TGTCCGCGCTGAGCTTTCAGCTGAAAGCTCTTCCGTGTCTCGTGTCTCTGTGCAACTGCCGTTGGGATACACCCTGTGCTCGCTTTGAATATGGTGCAAGCAAGTGAACACAGCTGGTGGTATCCAATGGCCGTTCTGCAACAATGCAACATCAGCAACAACAACAGCAACAGCAACGAGAACAACAACA

***********************************************...((((((.(((((((((...(((((((((.((((((................)))))).)))))..))))...))))))))).))..))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 M062

head

 GSM444067

head

 M022

male body		 V112

male body		 SRR902011

testis

 SRR902012

CNS imaginal disc

 M059

embryo

 GSM343916

embryo

 SRR902010

ovaries
........................................................................................................TGAACACAGCTGGTGGTATCC................................................................. 21 0 1 292046.00 292046 211372 65905 7071 5639 1562 146 179 101 32 39
........................................................................................................TGAACACAGCTGGTGGTATC.................................................................. 20 0 1 193070.00 193070 142733 39499 5566 2957 1906 133 128 46 27 75
........................................................................................................TGAACACAGCTGGTGGTATCCAAT.............................................................. 24 0 1 108124.00 108124 89388 7272 3906 4387 2653 134 55 93 187 49
........................................................................................................TGAACACAGCTGGTGGTATCCA................................................................ 22 0 1 62345.00 62345 50186 9086 1536 712 638 53 45 27 34 28
........................................................................................................TGAACACAGCTGGTGGTAT................................................................... 19 0 1 59669.00 59669 53877 1060 3231 224 1146 41 32 3 9 46
........................................................................................................TGAACACAGCTGGTGGTATCCAA............................................................... 23 0 1 19459.00 19459 18321 709 160 106 86 37 13 4 4 19
........................................................................................................TTAACACAGCTGGTGGTATCC................................................................. 21 1 1 17014.00 17014 100 16889 0 1 0 0 0 24 0 0
.........................................................................................................GAACACAGCTGGTGGTATCC................................................................. 20 0 1 10413.00 10413 10287 117 6 0 1 2 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATC.................................................................. 20 1 1 10362.00 10362 73 10271 2 0 0 0 0 16 0 0
..............................................................TGGGATACACCCTGTGCTCGCT.......................................................................................................... 22 0 1 9983.00 9983 8545 727 552 0 97 6 3 23 22 8
........................................................................................................TGAACACAGCTGGTGGTATCT................................................................. 21 1 1 8410.00 8410 7509 434 254 87 112 9 2 0 0 3
........................................................................................................TGAACACAGCTGGTGGTATT.................................................................. 20 1 1 7149.00 7149 6449 322 193 23 159 2 1 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATC.................................................................. 19 0 1 5967.00 5967 5900 65 1 0 1 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCCAAT.............................................................. 23 0 1 4029.00 4029 4011 13 2 0 3 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAATT............................................................. 25 1 1 3834.00 3834 3463 181 76 27 67 7 3 3 3 4
........................................................................................................TGAACACAGCTGGTGGTATCA................................................................. 21 1 1 3547.00 3547 3131 66 235 21 85 3 0 0 4 2
........................................................................................................TGAACACAGCTGGTGGTA.................................................................... 18 0 1 3218.00 3218 3030 61 73 47 3 0 2 0 0 2
.........................................................................................................GAACACAGCTGGTGGTATCCA................................................................ 21 0 1 3111.00 3111 3095 13 2 0 0 1 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATCCA................................................................ 22 1 1 2527.00 2527 19 2504 1 0 1 0 0 2 0 0
.........................................................................................................GAACACAGCTGGTGGTAT................................................................... 18 0 1 2242.00 2242 2241 0 1 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCT................................................................ 22 1 1 2235.00 2235 1905 199 31 66 32 1 0 1 0 0
........................................................................................................TGATCACAGCTGGTGGTATCC................................................................. 21 1 1 2189.00 2189 5 2182 0 0 0 0 0 2 0 0
........................................................................................................TTAACACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 1927.00 1927 49 1858 0 1 1 0 0 18 0 0
........................................................................................................TGAACACAGCTGGTGGTATTT................................................................. 21 2 1 1363.00 1363 1293 25 12 3 30 0 0 0 0 0
........................................................................................................TGATCACAGCTGGTGGTATC.................................................................. 20 1 1 1290.00 1290 3 1284 0 0 1 0 0 2 0 0
..............................................................TGGGATACACCCTGTGCTCGC........................................................................................................... 21 0 1 1280.00 1280 1159 56 28 0 34 1 0 2 0 0
...............................................................GGGATACACCCTGTGCTCGCT.......................................................................................................... 21 0 1 1210.00 1210 1173 34 1 0 0 0 0 2 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAAA.............................................................. 24 1 1 1195.00 1195 975 78 57 23 48 2 0 1 6 5
........................................................................................................TGAACACAGCTGGTGGTATCCAGT.............................................................. 24 1 1 1123.00 1123 1045 6 7 53 2 0 0 9 1 0
........................................................................................................TGAACACAGCTGGTGGGATCC................................................................. 21 1 1 1096.00 1096 66 926 21 79 1 0 1 2 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAAC.............................................................. 24 1 1 933.00 933 119 732 8 53 6 0 0 13 2 0
..............................................................TGGGATACACCCTGTGCTCG............................................................................................................ 20 0 1 890.00 890 820 8 31 0 31 0 0 0 0 0
.......................................................................................................CTGAACACAGCTGGTGGTATCC................................................................. 22 1 1 877.00 877 385 473 11 1 6 0 0 1 0 0
.........................................................................................................GAACACAGCTGGTGGTATCCAA............................................................... 22 0 1 815.00 815 814 1 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAG............................................................... 23 1 1 597.00 597 587 0 1 7 1 0 0 1 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAATA............................................................. 25 1 1 522.00 522 452 30 24 5 10 1 0 0 0 0
....................................................................................TTGAATATGGTGCAAGCAAG...................................................................................... 20 0 1 479.00 479 388 19 21 1 7 10 24 0 3 6
........................................................................................................TGAACACAGCTGGTGGTATA.................................................................. 20 1 1 478.00 478 407 22 32 1 14 1 0 0 0 1
.......................................................................................................CTGAACACAGCTGGTGGTATC.................................................................. 21 1 1 448.00 448 215 225 8 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCC................................................................ 22 1 1 439.00 439 258 137 24 8 11 1 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTTT................................................................... 19 1 1 415.00 415 389 7 9 6 4 0 0 0 0 0
........................................................................................................TAAACACAGCTGGTGGTATCC................................................................. 21 1 1 398.00 398 43 346 6 0 1 1 0 1 0 0
..........................................................................................................AACACAGCTGGTGGTATCC................................................................. 19 0 1 397.00 397 369 26 1 0 1 0 0 0 0 0
........................................................................................................TTATCACAGCTGGTGGTATCC................................................................. 21 2 1 387.00 387 0 387 0 0 0 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCT................................................................. 20 1 1 369.00 369 367 2 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGGGGTATCC................................................................. 21 1 1 366.00 366 142 161 25 34 1 1 0 0 0 2
........................................................................................................TGAACACAGCTGGCGGTATCC................................................................. 21 1 1 357.00 357 168 114 67 4 3 0 0 0 1 0
........................................................................................................TCAACACAGCTGGTGGTATCC................................................................. 21 1 1 352.00 352 61 288 1 0 2 0 0 0 0 0
........................................................................................................TGATCACAGCTGGTGGTATCCA................................................................ 22 1 1 337.00 337 2 335 0 0 0 0 0 0 0 0
........................................................................................................TGAACGCAGCTGGTGGTATCC................................................................. 21 1 1 328.00 328 103 206 13 5 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGCATCC................................................................. 21 1 1 324.00 324 113 154 45 8 4 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTAT................................................................... 19 1 1 298.00 298 28 270 0 0 0 0 0 0 0 0
.......................................................................................................GTGAACACAGCTGGTGGTATC.................................................................. 21 0 1 297.00 297 262 28 5 0 1 0 0 0 1 0
.........................................................................................................GAACACAGCTGGTGGTATT.................................................................. 19 1 1 295.00 295 293 2 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGAATCC................................................................. 21 1 1 294.00 294 56 208 14 10 1 2 1 1 0 1
.......................................................................................................TTGAACACAGCTGGTGGTATCC................................................................. 22 1 1 291.00 291 288 2 1 0 0 0 0 0 0 0
..............................................................TGGGATACACCCTGTGCTCGCC.......................................................................................................... 22 1 1 290.00 290 7 273 0 0 0 0 0 10 0 0
..............................................................TGGGATACACCCTGTGCTCGCTT......................................................................................................... 23 0 1 289.00 289 264 21 2 0 1 0 0 1 0 0
.......................................................................................................GTGAACACAGCTGGTGGTATCC................................................................. 22 0 1 286.00 286 281 5 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGGATC.................................................................. 20 1 1 281.00 281 31 215 20 15 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGCGGTATC.................................................................. 20 1 1 262.00 262 136 72 49 3 2 0 0 0 0 0
........................................................................................................TGAACACCGCTGGTGGTATCC................................................................. 21 1 1 261.00 261 6 250 3 0 1 0 0 1 0 0
........................................................................................................TGAACACAGCTGGTGGTATCTT................................................................ 22 2 1 260.00 260 236 7 11 0 6 0 0 0 0 0
........................................................................................................TGATCACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 257.00 257 1 254 1 0 0 0 0 1 0 0
........................................................................................................TAAACACAGCTGGTGGTATC.................................................................. 20 1 1 255.00 255 19 229 3 2 0 0 0 1 0 1
.......................................................................................................CTGAACACAGCTGGTGGTATCCAAT.............................................................. 25 1 1 255.00 255 187 56 3 1 7 0 0 0 1 0
........................................................................................................TGAACACAGCTGGTGGTAC................................................................... 19 1 1 246.00 246 91 145 3 6 1 0 0 0 0 0
........................................................................................................CGAACACAGCTGGTGGTATCC................................................................. 21 1 1 244.00 244 117 105 13 7 1 0 0 0 0 1
........................................................................................................TGAGCACAGCTGGTGGTATCC................................................................. 21 1 1 235.00 235 166 51 12 4 2 0 0 0 0 0
........................................................................................................TTATCACAGCTGGTGGTATC.................................................................. 20 2 1 228.00 228 0 228 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCACT.............................................................. 24 1 1 228.00 228 29 4 37 154 4 0 0 0 0 0
........................................................................................................TCAACACAGCTGGTGGTATC.................................................................. 20 1 1 227.00 227 31 192 2 1 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGTTATCC................................................................. 21 1 1 218.00 218 88 110 8 10 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTT.................................................................... 18 1 1 215.00 215 203 6 1 4 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAT............................................................... 23 1 1 215.00 215 201 9 4 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAATTT............................................................ 26 2 1 207.00 207 196 3 1 1 5 0 0 0 1 0
........................................................................................................TGAACACAGCTGGTGGTAA................................................................... 19 1 1 201.00 201 183 3 12 1 2 0 0 0 0 0
........................................................................................................TGAGCACAGCTGGTGGTATC.................................................................. 20 1 1 200.00 200 146 39 10 0 5 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATCCAAC.............................................................. 24 2 1 199.00 199 0 194 0 0 0 0 0 5 0 0
........................................................................................................TGAACGCAGCTGGTGGTATC.................................................................. 20 1 1 198.00 198 85 102 7 3 1 0 0 0 0 0
.......................................................................................................CTGAACACAGCTGGTGGTATCCA................................................................ 23 1 1 198.00 198 145 48 2 0 2 0 0 0 1 0
..............................................................TTGGATACACCCTGTGCTCGCT.......................................................................................................... 22 1 1 197.00 197 5 181 1 0 1 0 0 9 0 0
.......................................................................................................ATGAACACAGCTGGTGGTATCC................................................................. 22 1 1 195.00 195 188 7 0 0 0 0 0 0 0 0
........................................................................................................TGAACACGGCTGGTGGTATCC................................................................. 21 1 1 195.00 195 150 40 3 1 0 0 0 1 0 0
........................................................................................................TGAACACAGCTGGTGGTATTC................................................................. 21 1 1 194.00 194 29 159 2 2 1 0 0 1 0 0
........................................................................................................TTAACACAGCTGGTGGTATCCAA............................................................... 23 1 1 188.00 188 7 179 0 0 0 0 0 2 0 0
..........................................................................................................AACACAGCTGGTGGTATC.................................................................. 18 0 1 186.00 186 171 14 1 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGAGGTATCC................................................................. 21 1 1 183.00 183 62 60 52 9 0 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCCAATT............................................................. 24 1 1 182.00 182 182 0 0 0 0 0 0 0 0 0
........................................................................................................TGAACACCGCTGGTGGTATC.................................................................. 20 1 1 181.00 181 4 175 1 0 1 0 0 0 0 0
........................................................................................................TGAATACAGCTGGTGGTATCC................................................................. 21 1 1 178.00 178 24 147 5 1 1 0 0 0 0 0
........................................................................................................TGGACACAGCTGGTGGTATCC................................................................. 21 1 1 164.00 164 99 48 15 2 0 0 0 0 0 0
.......................................................................................................GTGAACACAGCTGGTGGTAT................................................................... 20 0 1 163.00 163 153 1 5 0 4 0 0 0 0 0
..........................................................................................................AACACAGCTGGTGGTATCCAAT.............................................................. 22 0 1 162.00 162 158 1 1 0 1 0 0 1 0 0
........................................................................................................TGCACACAGCTGGTGGTATCC................................................................. 21 1 1 160.00 160 3 139 17 0 1 0 0 0 0 0
...............................................................GGGATACACCCTGTGCTCGC........................................................................................................... 20 0 1 157.00 157 154 3 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGTTATC.................................................................. 20 1 1 156.00 156 61 81 4 8 2 0 0 0 0 0
.......................................................................................................TTGAACACAGCTGGTGGTATC.................................................................. 21 1 1 154.00 154 153 1 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAGA.............................................................. 24 2 1 151.00 151 144 0 0 0 0 0 0 6 1 0
.......................................................................................................GTGAACACAGCTGGTGGTATCCAAT.............................................................. 25 0 1 150.00 150 149 1 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGCATC.................................................................. 20 1 1 149.00 149 53 48 44 2 2 0 0 0 0 0
................................................................GGATACACCCTGTGCTCGCT.......................................................................................................... 20 0 1 149.00 149 148 1 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTTGTGGTATCC................................................................. 21 1 1 148.00 148 103 28 3 11 3 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTACCC................................................................. 21 1 1 146.00 146 90 41 9 1 4 0 1 0 0 0
........................................................................................................TGAACACAGCTGGGGGTATCCAAT.............................................................. 24 1 1 146.00 146 58 31 11 37 7 2 0 0 0 0
........................................................................................................TGAACACAGCCGGTGGTATCC................................................................. 21 1 1 146.00 146 107 29 6 3 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGGGGTATC.................................................................. 20 1 2 141.50 283 104 130 12 37 0 0 0 0 0 0
........................................................................................................CGAACACAGCTGGTGGTATC.................................................................. 20 1 1 140.00 140 59 70 8 2 1 0 0 0 0 0
........................................................................................................TGAATACAGCTGGTGGTATC.................................................................. 20 1 1 140.00 140 16 117 3 2 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGGATCCAAT.............................................................. 24 1 1 139.00 139 33 54 8 43 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTTTT.................................................................. 20 2 1 139.00 139 131 4 2 2 0 0 0 0 0 0
........................................................................................................TGAACACACCTGGTGGTATCC................................................................. 21 1 1 136.00 136 38 92 3 3 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGAGGTATC.................................................................. 20 1 1 134.00 134 38 54 34 8 0 0 0 0 0 0
........................................................................................................TGAACACATCTGGTGGTATCC................................................................. 21 1 1 134.00 134 82 44 2 4 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTGTCC................................................................. 21 1 1 133.00 133 83 27 21 1 1 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCA................................................................. 20 1 1 133.00 133 132 1 0 0 0 0 0 0 0 0
........................................................................................................TGAACACCGCTGGTGGGATCC................................................................. 21 2 1 131.00 131 0 130 0 0 0 0 0 1 0 0
........................................................................................................TGAACACAGCTGGTGGTATCG................................................................. 21 1 1 130.00 130 70 42 14 1 3 0 0 0 0 0
.......................................................................................................TTGAACACAGCTGGTGGTATCCAAT.............................................................. 25 1 1 130.00 130 129 1 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGCGGTATCCAAT.............................................................. 24 1 1 129.00 129 74 18 22 5 7 1 0 0 2 0
........................................................................................................GGAACACAGCTGGTGGTATCC................................................................. 21 1 1 128.00 128 35 84 8 0 0 0 0 1 0 0
........................................................................................................TGAACACAGCTGCTGGTATCC................................................................. 21 1 1 125.00 125 36 65 5 18 0 0 0 1 0 0
.......................................................................................................ATGAACACAGCTGGTGGTATC.................................................................. 21 1 1 124.00 124 120 3 0 0 0 0 0 0 0 1
........................................................................................................TTAACACCGCTGGTGGTATCC................................................................. 21 2 1 123.00 123 0 123 0 0 0 0 0 0 0 0
........................................................................................................TGCACACAGCTGGTGGTATC.................................................................. 20 1 1 119.00 119 2 102 15 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGGATCCA................................................................ 22 1 1 119.00 119 12 96 3 7 0 0 0 1 0 0
..........................................................................................................AACACAGCTGGTGGTATCCA................................................................ 20 0 1 117.00 117 112 3 2 0 0 0 0 0 0 0
........................................................................................................TGAACACGGCTGGTGGTATC.................................................................. 20 1 1 114.00 114 78 26 6 2 2 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGGATCC................................................................. 21 2 2 113.50 227 0 227 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGTTGGTATCC................................................................. 21 1 1 113.00 113 58 15 4 33 3 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATT.................................................................. 20 2 1 112.00 112 6 106 0 0 0 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCCAGT.............................................................. 23 1 1 111.00 111 111 0 0 0 0 0 0 0 0 0
........................................................................................................TGAGCACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 109.00 109 91 10 3 2 3 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCTT............................................................... 23 2 1 109.00 109 108 0 0 1 0 0 0 0 0 0
........................................................................................................TGAACACAGCTAGTGGTATCC................................................................. 21 1 1 109.00 109 36 56 9 3 4 0 0 0 0 1
........................................................................................................TGAACACAGCTGCTGGTATC.................................................................. 20 1 1 107.00 107 13 65 5 22 2 0 0 0 0 0
........................................................................................................TGAACACAGCTCGTGGTATCC................................................................. 21 1 1 105.00 105 37 56 6 5 1 0 0 0 0 0
.......................................................................................................CTGAACACAGCTGGTGGTAT................................................................... 20 1 1 105.00 105 86 16 2 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCCGGTGGTATC.................................................................. 20 1 1 102.00 102 74 20 5 2 1 0 0 0 0 0
........................................................................................................AGAACACAGCTGGTGGTATCC................................................................. 21 1 1 101.00 101 33 60 6 0 1 0 0 0 0 1
........................................................................................................TGAACACAGCTGGTGGTATCCG................................................................ 22 1 1 100.00 100 92 1 3 3 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGTTATCCAAT.............................................................. 24 1 1 99.00 99 50 7 2 37 3 0 0 0 0 0
........................................................................................................TGGACACAGCTGGTGGTATC.................................................................. 20 1 1 96.00 96 59 27 9 0 1 0 0 0 0 0
........................................................................................................TGAACACATCTGGTGGTATC.................................................................. 20 1 1 94.00 94 62 20 6 5 1 0 0 0 0 0
.......................................................................................................ATGAACACAGCTGGTGGTATCCAAT.............................................................. 25 1 1 92.00 92 92 0 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGAATC.................................................................. 20 1 1 92.00 92 33 36 22 1 0 0 0 0 0 0
........................................................................................................TGAACACACCTGGTGGTATC.................................................................. 20 1 1 89.00 89 23 64 1 1 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGCTATCC................................................................. 21 1 1 89.00 89 48 29 8 3 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTGTC.................................................................. 20 1 1 87.00 87 53 16 16 1 1 0 0 0 0 0
........................................................................................................TGAACGCAGCTGGTGGTATCCAAT.............................................................. 24 1 1 86.00 86 58 20 4 1 2 0 0 0 1 0
........................................................................................................TGAACACAGCTGGTGGCATCCAAT.............................................................. 24 1 1 84.00 84 45 11 16 6 6 0 0 0 0 0
.......................................................................................................GTGAACACAGCTGGTGGTATCCA................................................................ 23 0 1 83.00 83 83 0 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGCGGTAT................................................................... 19 1 1 83.00 83 43 5 31 0 4 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGATATCC................................................................. 21 1 1 82.00 82 35 36 9 1 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTACC.................................................................. 20 1 1 82.00 82 47 27 5 1 2 0 0 0 0 0
........................................................................................................GGAACACAGCTGGTGGTATC.................................................................. 20 1 1 81.00 81 24 52 4 1 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAGTT............................................................. 25 2 1 81.00 81 80 0 0 1 0 0 0 0 0 0
........................................................................................................AGAACACAGCTGGTGGTATC.................................................................. 20 1 1 81.00 81 25 49 6 1 0 0 0 0 0 0
........................................................................................................TGAACACAGCTCGTGGTATC.................................................................. 20 1 1 80.00 80 36 33 7 2 1 0 1 0 0 0
.............................................................................................................ACAGCTGGTGGTATCCAAT.............................................................. 19 0 1 80.00 80 71 8 0 0 1 0 0 0 0 0
........................................................................................................TTAACACCGCTGGTGGTATC.................................................................. 20 2 1 79.00 79 0 78 1 0 0 0 0 0 0 0
........................................................................................................TGAACTCAGCTGGTGGTATCC................................................................. 21 1 1 79.00 79 9 68 1 1 0 0 0 0 0 0
...............................................................GGGATACACCCTGTGCTCG............................................................................................................ 19 0 1 78.00 78 78 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGAACACAGCTGGTGGTATCCA................................................................ 23 1 1 77.00 77 77 0 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGTTGGTATC.................................................................. 20 1 1 75.00 75 32 16 8 18 1 0 0 0 0 0
.......................................................................................................CGGAACACAGCTGGTGGTATCC................................................................. 22 2 1 72.00 72 0 72 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTTGTATC.................................................................. 20 1 1 72.00 72 50 9 3 8 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAC............................................................... 23 1 1 71.00 71 45 12 3 9 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATAC................................................................. 21 1 1 71.00 71 20 42 9 0 0 0 0 0 0 0
..............................................................TTGGATACACCCTGTGCTCGCC.......................................................................................................... 22 2 1 71.00 71 0 68 0 0 0 0 0 3 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAAAA............................................................. 25 2 1 70.00 70 54 2 6 0 7 1 0 0 0 0
........................................................................................................TAAACACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 70.00 70 19 44 4 2 0 0 0 0 1 0
........................................................................................................TGAACACAGCTGGGGGTATCCA................................................................ 22 1 1 69.00 69 33 24 5 5 1 1 0 0 0 0
........................................................................................................TGAACACAGCTGGCGGTATCCA................................................................ 22 1 1 69.00 69 48 12 9 0 0 0 0 0 0 0
........................................................................................................TGAGCACAGCTGGTGGTATCCA................................................................ 22 1 1 68.00 68 59 6 1 1 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTTGTATCC................................................................. 21 1 1 67.00 67 37 16 3 9 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTAGTATCC................................................................. 21 1 1 67.00 67 22 38 4 3 0 0 0 0 0 0
........................................................................................................TGAACACAGCTTGTGGTATC.................................................................. 20 1 1 67.00 67 39 18 2 7 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGCTATC.................................................................. 20 1 1 67.00 67 30 23 10 3 1 0 0 0 0 0
.......................................................................................................TTGAACACAGCTGGTGGTAT................................................................... 20 1 1 66.00 66 66 0 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATTTT................................................................ 22 3 2 65.50 131 122 0 6 0 3 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCCT................................................................ 21 1 1 65.00 65 65 0 0 0 0 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATCCT................................................................ 22 2 1 64.00 64 0 64 0 0 0 0 0 0 0 0
.......................................................................................................ATGAACACAGCTGGTGGTATCCA................................................................ 23 1 1 64.00 64 64 0 0 0 0 0 0 0 0 0
........................................................................................................TTATCACAGCTGGTGGTATCCA................................................................ 22 2 1 63.00 63 0 63 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATTA................................................................. 21 2 1 62.00 62 56 1 3 0 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTAGTATC.................................................................. 20 1 1 62.00 62 18 38 3 1 1 0 1 0 0 0
........................................................................................................TGAACACAGCTAGTGGTATC.................................................................. 20 1 1 62.00 62 31 26 4 0 1 0 0 0 0 0
........................................................................................................TGAACACAGTTGGTGGTATCC................................................................. 21 1 1 61.00 61 23 34 3 1 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGCATCCA................................................................ 22 1 1 61.00 61 39 11 8 0 3 0 0 0 0 0
........................................................................................................TTATCACAGCTGGTGGTATCCAAT.............................................................. 24 2 1 60.00 60 0 59 0 0 0 0 0 1 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCATT.............................................................. 24 1 1 59.00 59 41 3 13 0 0 0 1 0 1 0
........................................................................................................TGAACACAGCTGGAGGTATCCAAT.............................................................. 24 1 1 59.00 59 21 14 14 7 0 0 0 0 3 0
........................................................................................................TGAACATAGCTGGTGGTATCC................................................................. 21 1 1 59.00 59 30 25 4 0 0 0 0 0 0 0
........................................................................................................TGAACACAACTGGTGGTATCC................................................................. 21 1 1 58.00 58 26 25 6 0 0 0 1 0 0 0
........................................................................................................TGAACACAGCTGGTGGAATCCAAT.............................................................. 24 1 1 58.00 58 31 16 4 4 2 1 0 0 0 0
........................................................................................................TGAACACAGCTGATGGTATCC................................................................. 21 1 1 58.00 58 21 20 2 15 0 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATCT................................................................. 21 2 2 57.50 115 4 111 0 0 0 0 0 0 0 0
....................................................................................................GATCTGAACACAGCTGGTGGTATCC................................................................. 25 3 1 57.00 57 0 57 0 0 0 0 0 0 0 0
........................................................................................................TGAACACGGCTGGTGGTATCCAAT.............................................................. 24 1 1 56.00 56 45 4 5 0 2 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATCCAATT............................................................. 25 2 1 55.00 55 4 50 1 0 0 0 0 0 0 0
........................................................................................................TAAACACAGCTGGTGGTATCCA................................................................ 22 1 1 54.00 54 13 41 0 0 0 0 0 0 0 0
........................................................................................................TGGACACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 54.00 54 39 6 7 2 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATAA................................................................. 21 2 1 53.00 53 39 0 6 0 8 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGAATCC................................................................. 21 2 1 53.00 53 0 53 0 0 0 0 0 0 0 0
........................................................................................................GTAACACAGCTGGTGGTATCC................................................................. 21 2 1 52.00 52 0 52 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAATC............................................................. 25 1 1 52.00 52 25 22 3 0 2 0 0 0 0 0
........................................................................................................CGAACACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 52.00 52 40 7 3 1 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTGTCCAAT.............................................................. 24 1 1 52.00 52 38 4 7 1 1 0 0 0 1 0
........................................................................................................TTAACACAGCTGGTGGTATCCC................................................................ 22 2 1 52.00 52 0 51 0 0 0 0 0 1 0 0
........................................................................................................TGAACACAGCTGGTGGTACCCAAT.............................................................. 24 1 1 51.00 51 46 0 3 2 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGCAT................................................................... 19 1 1 51.00 51 26 1 23 0 1 0 0 0 0 0
........................................................................................................TGAACACATCTGGTGGTATCCAAT.............................................................. 24 1 1 51.00 51 40 7 1 1 2 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCGAT.............................................................. 24 1 1 50.00 50 34 3 13 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCCGGTGGTATCCAAT.............................................................. 24 1 1 50.00 50 36 5 6 2 1 0 0 0 0 0
........................................................................................................TGAACGCAGCTGGTGGTATCCA................................................................ 22 1 1 50.00 50 24 25 1 0 0 0 0 0 0 0
........................................................................................................CTAACACAGCTGGTGGTATCC................................................................. 21 2 1 50.00 50 0 50 0 0 0 0 0 0 0 0
........................................................................................................TGAACACCGCTGGTGGGATC.................................................................. 20 2 1 49.00 49 0 49 0 0 0 0 0 0 0 0
........................................................................................................TGAACTCAGCTGGTGGTATC.................................................................. 20 1 1 49.00 49 8 40 0 0 0 0 0 1 0 0
.........................................................................................................GAACACAGCTGGTGGTATTT................................................................. 20 2 1 49.00 49 49 0 0 0 0 0 0 0 0 0
........................................................................................................TGAGCACAGCTGGTGGTAT................................................................... 19 1 1 49.00 49 40 2 6 0 1 0 0 0 0 0
........................................................................................................TCAACACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 48.00 48 20 26 1 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGAATCCA................................................................ 22 1 1 48.00 48 24 19 2 0 0 1 1 0 0 1
........................................................................................................TGAACACAGCTGGTGGTATCCAATG............................................................. 25 0 1 47.00 47 36 8 1 2 0 0 0 0 0 0
...........................................................................................................ACACAGCTGGTGGTATCC................................................................. 18 0 1 47.00 47 44 3 0 0 0 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCCAAA.............................................................. 23 1 1 47.00 47 47 0 0 0 0 0 0 0 0 0
.......................................................................................................CTGAACACAGCTGGTGGTATCCAA............................................................... 24 1 1 47.00 47 43 4 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTCGTATC.................................................................. 20 1 1 47.00 47 17 16 7 7 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGATGGTATC.................................................................. 20 1 1 46.00 46 22 9 5 10 0 0 0 0 0 0
........................................................................................................CGAACACAGCTGGTGGTAT................................................................... 19 1 1 45.00 45 36 0 9 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGTTATCCA................................................................ 22 1 1 45.00 45 25 16 1 3 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGCTATCCAAT.............................................................. 24 1 1 45.00 45 25 1 1 16 2 0 0 0 0 0
........................................................................................................TGAACATAGCTGGTGGTATC.................................................................. 20 1 1 45.00 45 22 16 4 0 3 0 0 0 0 0
........................................................................................................CGAACACAGCTGGTGGTATCCA................................................................ 22 1 1 45.00 45 29 12 2 0 2 0 0 0 0 0
..............................................................TGGGATACACCCTGTGCTCGT........................................................................................................... 21 1 1 44.00 44 40 0 0 0 4 0 0 0 0 0
..............................................................TGCGATACACCCTGTGCTCGCT.......................................................................................................... 22 1 1 44.00 44 0 40 2 0 0 0 0 2 0 0
..............................................................................................................CAGCTGGTGGTATCCAAT.............................................................. 18 0 1 44.00 44 39 3 1 0 1 0 0 0 0 0
...............................................................GGGATACACCCTGTGCTCGCTT......................................................................................................... 22 0 1 44.00 44 43 1 0 0 0 0 0 0 0 0
........................................................................................................TTAACACAGCTGGTGGTATTC................................................................. 21 2 1 43.00 43 0 43 0 0 0 0 0 0 0 0
........................................................................................................TGAACACCGCTGGTGGTATCCA................................................................ 22 1 1 43.00 43 1 39 1 1 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATG.................................................................. 20 1 1 43.00 43 37 3 2 1 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCCAT.............................................................. 24 1 1 42.00 42 2 12 17 0 1 0 0 1 9 0
........................................................................................................TGAACACAGCTGGTGATATC.................................................................. 20 1 1 42.00 42 19 17 5 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCTTT............................................................... 23 3 1 42.00 42 39 2 0 0 1 0 0 0 0 0
.......................................................................................................CGGAACACAGCTGGTGGTATC.................................................................. 21 2 1 42.00 42 0 42 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTTTC.................................................................. 20 1 1 41.00 41 12 22 7 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTCGTATCC................................................................. 21 1 1 40.00 40 15 16 6 3 0 0 0 0 0 0
........................................................................................................TGAACACGGCTGGTGGTATCCA................................................................ 22 1 1 40.00 40 32 6 2 0 0 0 0 0 0 0
........................................................................................................TCAACACAGCTGGTGGTATCCA................................................................ 22 1 1 39.00 39 8 31 0 0 0 0 0 0 0 0
........................................................................................................TGAACAGAGCTGGTGGTATCC................................................................. 21 1 1 39.00 39 5 33 1 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTTGTATCCAAT.............................................................. 24 1 1 39.00 39 14 4 0 20 0 0 0 0 1 0
........................................................................................................TGAACACAGCTGGTGGTATCCAAG.............................................................. 24 1 1 39.00 39 22 12 2 3 0 0 0 0 0 0
....................................................................................................GATCTGAACACAGCTGGTGGTATC.................................................................. 24 3 1 39.00 39 0 39 0 0 0 0 0 0 0 0
........................................................................................................TGAACACGGCTGGTGGTAT................................................................... 19 1 1 39.00 39 32 0 6 0 1 0 0 0 0 0
........................................................................................................TGCACACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 37.00 37 3 26 7 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGGAT................................................................... 19 1 1 37.00 37 13 4 19 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAATAA............................................................ 26 2 1 37.00 37 33 0 1 0 3 0 0 0 0 0
........................................................................................................TTAACACAGCTGGGGGTATCC................................................................. 21 2 1 37.00 37 0 37 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAACTGGTGGTATC.................................................................. 20 1 1 36.00 36 20 11 3 1 1 0 0 0 0 0
........................................................................................................TGGACACAGCTGGTGGTAT................................................................... 19 1 1 36.00 36 27 1 7 0 1 0 0 0 0 0
.......................................................................................................ATGAACACAGCTGGTGGTAT................................................................... 20 1 1 35.00 35 35 0 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTGTCCA................................................................ 22 1 1 35.00 35 22 6 4 1 2 0 0 0 0 0
........................................................................................................TGAATACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 35.00 35 14 14 2 1 4 0 0 0 0 0
........................................................................................................GGAACACAGCTGGTGGTATCCAAT.............................................................. 24 1 1 35.00 35 21 12 2 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTAACC................................................................. 21 1 1 34.00 34 14 17 3 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTTTCC................................................................. 21 1 1 34.00 34 10 22 2 0 0 0 0 0 0 0
........................................................................................................TTAATACAGCTGGTGGTATCC................................................................. 21 2 1 34.00 34 0 34 0 0 0 0 0 0 0 0
........................................................................................................TGAACACATCTGGTGGTATCCA................................................................ 22 1 1 34.00 34 25 7 0 1 1 0 0 0 0 0
........................................................................................................TGATCACAGCTGGTGGTAT................................................................... 19 1 1 34.00 34 1 33 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTGT................................................................... 19 1 1 34.00 34 24 0 10 0 0 0 0 0 0 0
.......................................................................................................GTGAACACAGCTGGTGGTATCCAA............................................................... 24 0 1 33.00 33 33 0 0 0 0 0 0 0 0 0
.........................................................................................................GAACACAGCTGGTGGTATCCAG............................................................... 22 1 1 33.00 33 33 0 0 0 0 0 0 0 0 0
..............................................................TGGGATACACCCTGTGCTCGCTTT........................................................................................................ 24 0 1 33.00 33 32 1 0 0 0 0 0 0 0 0
........................................................................................................ATAACACAGCTGGTGGTATCC................................................................. 21 2 1 32.00 32 0 32 0 0 0 0 0 0 0 0
......................................................................................................TCTGAACACAGCTGGTGGTATCC................................................................. 23 2 1 32.00 32 1 28 2 1 0 0 0 0 0 0
........................................................................................................TGAACACAGTTGGTGGTATC.................................................................. 20 1 1 32.00 32 18 13 1 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGCTGGTATCCAAT.............................................................. 24 1 1 32.00 32 10 9 3 7 3 0 0 0 0 0
........................................................................................................TGAACACACCTGGTGGTATCCA................................................................ 22 1 1 31.00 31 15 16 0 0 0 0 0 0 0 0
........................................................................................................ATAACACAGCTGGTGGTATC.................................................................. 20 2 1 31.00 31 0 31 0 0 0 0 0 0 0 0
..........................................................................................................AACACAGCTGGTGGTATCCAA............................................................... 21 0 1 31.00 31 31 0 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGATGGTATCCAAT.............................................................. 24 1 1 31.00 31 9 9 4 9 0 0 0 0 0 0
........................................................................................................TGAACACAGCCGGTGGTAT................................................................... 19 1 1 31.00 31 25 0 5 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGAGGTATCCA................................................................ 22 1 1 31.00 31 15 10 4 1 1 0 0 0 0 0
........................................................................................................TGAACGCAGCTGGTGGTAT................................................................... 19 1 1 31.00 31 21 3 6 0 1 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTAGCC................................................................. 21 1 1 31.00 31 1 21 9 0 0 0 0 0 0 0
........................................................................................................TGAACACCGCTGGTGGTATCCAAT.............................................................. 24 1 1 30.00 30 6 20 0 0 3 0 0 0 1 0
........................................................................................................TTAACACAGCTGGTGGCATCC................................................................. 21 2 1 30.00 30 1 29 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCAGGTGGTATCC................................................................. 21 1 1 30.00 30 8 16 6 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTAGTGGTATCCAAT.............................................................. 24 1 1 30.00 30 13 5 8 1 3 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGATATCCAAT.............................................................. 24 1 1 29.00 29 19 4 5 0 1 0 0 0 0 0
........................................................................................................GTAACACAGCTGGTGGTATC.................................................................. 20 2 1 29.00 29 0 29 0 0 0 0 0 0 0 0
.......................................................................................................CTCAACACAGCTGGTGGTATCC................................................................. 22 2 1 29.00 29 0 29 0 0 0 0 0 0 0 0
........................................................................................................TGAAAACAGCTGGTGGTATCC................................................................. 21 1 1 29.00 29 13 2 13 0 0 0 0 0 1 0
........................................................................................................TGAATACAGCTGGTGGTATCCA................................................................ 22 1 1 29.00 29 8 19 1 0 0 0 1 0 0 0
........................................................................................................TGAACACAGCTGGTGGAAT................................................................... 19 1 1 28.00 28 15 2 10 0 0 0 1 0 0 0
........................................................................................................TTAACACAGCTGGCGGTATC.................................................................. 20 2 1 28.00 28 0 28 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAACC............................................................. 25 2 1 28.00 28 17 10 0 0 0 0 0 1 0 0
........................................................................................................TTAACACAGCTGGTGTTATCC................................................................. 21 2 1 28.00 28 0 28 0 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTGGTGGTATCCAGTA............................................................. 25 2 1 27.00 27 26 0 0 1 0 0 0 0 0 0
........................................................................................................TGGACACAGCTGGTGGTATCCA................................................................ 22 1 1 27.00 27 17 8 2 0 0 0 0 0 0 0
........................................................................................................TGAACACAGCTTGTGGTATCCAAT.............................................................. 24 1 1 27.00 27 22 0 3 0 2 0 0 0 0 0

Anti-sense strand reads

ACAGGCGCGACTCGAAAGTCGACTTTCGAGAAGGCACAGAGCACAGAGACACGTTGACGGCAACCCTATGTGGGACACGAGCGAAACTTATACCACGTTCGTTCACTTGTGTCGACCACCATAGGTTACCGGCAAGACGTTGTTACGTTGTAGTCGTTGTTGTTGTCGTTGTCGTTGCTCTTGTTGTTGT

**************************************************...((((((.(((((((((...(((((((((.((((((................)))))).)))))..))))...))))))))).))..))))*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 M059

embryo

 M022

male body
....................................................................................................GATCCCTTGTGTCGACCACT...................................................................... 20 3 2 2.50 5 4 1 0
....................................................................AGTGGGACACGAGCGAAACTTA.................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................................................................................GTTACGTTGTAGTCGTTGT.............................. 19 0 3 0.33 1 1 0 0
...................................................................................................................................................TTGTAGTCGTTGTTGTTGTC....................... 20 0 3 0.33 1 1 0 0
..................................................................................................................................................GTTGTAGTCGTTGTTGTTGT........................ 20 0 8 0.13 1 1 0 0
.....................................................................................................GTCCCTTGTGTCGACCACT...................................................................... 19 3 19 0.05 1 1 0 0
..................................................................................................................................................................TTGTCGTTGTAGTTGCTC.......... 18 1 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 2:5029951-5030140 - dps-mir-317 Known_mirbase TGTCCGCGCTGA--GCTTTC--AGCTG---AAAGC---T-C-------TTCCGTGTCTCGTGTCTCTGTGCAACTGCCGTTGGGATAC-ACCCTGTGCTCGCTTTGAATATGGTGCAAGCAAGTGAACACAGCTGGTGGTATCCAATGGCCGTT-CTG---CAACAATGCA--------ACATCAGC-AACAACAAC---------AGCAA------------CAGCAACG-----------------A-----------GAAC--------------------AACAA----------------------------CA
droPer2 scaffold_19:735470-735653 - dpe-mir-317-1 Known_mirbase TGTCCGCGCTGA--GCTTTC--AGCTG---AAAGC---T-C-------TTCCGTGTCTCGTGTCTCTGTGCAACTGCCGTTGGGATAC-ACCCTGTGCTCGCTTTGAATATGGTGCAAGCAAGTGAACACAGCTGGTGGTATCCAATGGCCGTT-CTG---CAACAATGCA--------ACATCAGC-AACAACAAC---------AGCAA------------------CGAGA----------------------------AC--------------------AACAA----------------------------CA
droWil2 scf2_1100000004902:11180016-11180198 - dwi-mir-317 Known_mirbase TTTCAATGCTAAAAGCTC------CAA---AAAGC---TTTCTAGATTCT-TC-------------TGTGCAACTGCCACTGGGATAC-ACCCTGTGCTCGCTTTGAATATTGTGCAAACAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TTT-TGCATCCATGCA--------ACACCAAA-A-----------------GATAA------------------A---TATTCTTCGCCAGG-A-----------AAGG--------------------CACTC----------------------------CA
droVir3 scaffold_12855:2698443-2698662 - dvi-mir-317 Known_mirbase TGTCCATGCTAA--GCTTTC--GCTAA---AAAGC---T-T-------TTTC--------------AGTGCAATTGCCGCTGGGATAC-ACCCTGTGCTCGCTTTGAATT--GTGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT--GGC--AGCCAATGCA--------ACAATTGC-AACAA------CTGC-A--ACAACAACAACTGCAACA-------------------------------------AC-----AACAACTGCAACAGCAACAACAACAACGAATACTGCAACAACTTGAGGCA
droMoj3 scaffold_6540:11898802-11898990 - dmo-mir-317 Known_mirbase TGTCTTCGCTAA--GCTTTTTCATCTGAG-TAAGC---TTT-------CTCTC-------------TGTGCAATTGCCGCTGGGATAC-ACCCTGTGCTCGCTTTGAGTTT-ATGT-TGCAAGTGAACACAGCTGGTGGTATCCAGAGGCCGTT--GAC--AGCCAATGCA--------ACAACAGC-AACAACCAC---------TACAA---------CAACG---ACGA---------------------------------------CGACAGCAACATCAACAA----------------------------CA
droGri2 scaffold_14624:2253085-2253304 + dgr-mir-317 Known_mirbase TGTCCCCACTAA--GCTTTC--GTTGA---AAAAAAGCT-T-------TTCGC-------------TGTGCAATTGCCACTGGGATATTGCCCTGTGCTCGCTTTGAATATTGTGTAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CGCACATGCA--------ACAACAAC-AACAA------GAGC-A--ACAACTACAGCAACAACT-------------------------------------AC-----AACAACAGCAGCTGCAACAACAACCAGGGCGATTGCAAGT-------GCC
droAna3 scaffold_13340:6479955-6480132 + dan-mir-317 Known_mirbase TGTCCGCGCTGA--GCTTTCG-CGCGA---AAAGCTCAT-T----------TG-------------TGTGCATCGGCTGCTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TTG---CATCCTTTCA--------ACTT----------CAAGGATAAC-AA--C---------AGCAACAACAACA-----------AC-----------------AGC--------------------AACAA----------------------------CA
droBip1 scf7180000396708:2369038-2369206 - TGTCCGCGCTGA--GCTTTT--GTCCGAGAAAAGC---T-C-------CTTTG-------------TGTGCATCTGCTGCTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TTG---CATCCTTTCA--------ACTT----------CAAGGATAACCAA--C---------AGCA----------------------------------------AC--------------------AACAA----------------------------CA
droKik1 scf7180000302706:2168695-2168873 + TGTCCGCGCTAA--GCTTTC--CACGC---GAAGC---T-T-------TTCCA-------------TGTGCAACTGCCAGTGGGATAC-ACCCTGTGCTCGCTTTGAAA-AACCGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTTTTAG---CATAATTTCAAC--TGCAG--CGAGA-AACCGAAAG---------GATC---------------------------CGCCGGAAGGAA--------------G---------------------GATA----------------------------TG
droFic1 scf7180000454104:911411-911588 - TGTCCCCGCTGA--GCTTTTC-CGCGA---AAAGCTGAT-T-------GTCCA-------------TGTGCAACTGCCGTTGGGATAC-ACCCTGTGCTCGCTTTGAATACAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCA--------GCTCCAGA-ATCATCCAG---------GATAC---------------------------TTCTCCG---A-----------AAACT---------------------CAA-----------------------------C
droEle1 scf7180000490967:813791-813943 - TGTACTTGCTGA--GCTTTC--CGCGA---AAAGCTGAA-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATAAACTGC-AGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCA--------GCTCCAGATACCTCCA----------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779228:16059-16207 + TGTACTTGCTGA--GCTTTC--CGCGA---AAAGCTAAA-T-------TTTCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATAAACTGC-AGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCA--------GCTCCAGA-ATCG-------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302402:3413495-3413674 + TGTCCCTGCTGA--GCTTTC--CGCGA---AAAGCGCCA-C-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAACTGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-ACG---CATCCTTGCACCCTTGCAGCTCCAGA-ACCGCCAAG---------GACCA------------------------TGCCC--------------------------------------------CACCC----------------------------CA
droTak1 scf7180000415245:189175-189360 - TGTCCCTGCTGA--GCTTTT--CGCGA---AAAGCAAAA-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATAAATTGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-CGG---CATCCTTGCA--------GCTCCAGA-AACAACGAG---------GATAA------------------C-----TACCCCACCA-------------------TTCGAGTC------------TTCAG----------------------------CA
droEug1 scf7180000409470:249826-250003 + TGTCTCTGCTGA--GCTTTT--GACGA---AAAGCAAAA-T-------TTTCA-------------TATGCATCTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAATTGCAAGCAAGTGAACACAGCTGGTGGTATCCATTGGCCGTTCTTG---CATCCTTGCA--------GCTCCATT-AACTCCAAG---------GATAA---------------------------ACCATAG---A-----------GAACTT----------------------T----------------------------CA
dm3 chr3R:5916809-5916979 + dme-mir-317 Known_mirbase TGTCTCTGCTGA--GCTTTT--TGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCT--------GCACCACAAAACTCCAAG---------GATAA------------------CGAGAATG--------------------------------------------------------------------------------CC
droSim2 3r:15131585-15131768 - dsi-mir-317 Known_mirbase TGTCTCTGCTGA--GCTTTT--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCT--------GCTCCACA-AACTCCAAG---------GATAA------------------CGGGAATGCCCCATCG---A-----------GAAGTT----------------------------------------------------C
droSec2 scaffold_0:15996535-15996718 - dse-mir-317 Known_mirbase TGTCTCTGCTGA--GCTTTT--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCT--------GCTCCACA-AACTCCAAG---------AATAA------------------CGAGAATGCCCCACCG---G-----------GAAGTT----------------------------------------------------C
droYak3 3R:9963935-9964127 + dya-mir-317 Known_mirbase TGTCTCTGCTGA--GCTTTT--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CGTCCTTGCT--------GCTCCAGA-AACTCCAAG---------GATAA------------------CGAGAACGCCCC--CG---AGAATGTGCCACGAACTT----------------------------------------------------C
droEre2 scaffold_4770:15683418-15683601 - der-mir-317 Known_mirbase TGTCTCTGCTGA--GCTTTG--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CGTCCTTGCT--------GCTCCAGA-AACTCCAAG---------GACAA------------------CGAGAATGCCCCACTG---A-----------GAACGT----------------------------------------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGTCCGCGCTGA--GCTTTC--AGCTG---AAAGC---T-C-------TTCCGTGTCTCGTGTCTCTGTGCAACTGCCGTTGGGATAC-ACCCTGTGCTCGCTTTGAATATGGTGCAAGCAAGTGAACACAGCTGGTGGTATCCAATGGCCGTT-CTG---CAACAATGCA--------ACATCAGC-AACAACAAC---------AGCAA------------CAGCAACG-----------------A-----------GAAC--------------------AACAA----------------------------CASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211292046.00292046563921137210165905327071156239146179
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201193070.0019307029571427334639499275566190675133128
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAT............................................................................................................................................................................241108124.00108124438789388937272187390626534913455
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................22162345.006234571250186279086341536638285345
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19159669.00596692245387731060932311146464132
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................23119459.0019459106183214709416086193713
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................20110413.00104130102870117061020
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2219983.00998308545237272255297863
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2118410.00841087750904340254112392
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2017149.00714923644903220193159021
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1915967.00596705900065011000
............................................................................................................................GAACACAGCTGGTGGTATCCAAT............................................................................................................................................................................2314029.00402904011013023000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATT...........................................................................................................................................................................2513834.003834273463318137667473
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2113547.003547213131066423585230
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1813218.0032184730300610733202
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2113111.00311103095013020010
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................1812242.0022420224100010000
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2212235.002235661905119903132010
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................2111363.0013633129302501230000
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................2111280.0012800115925602834010
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2111210.00121001173234010000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................2411195.0011952397517865748520
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAC............................................................................................................................................................................241933.009335311913732286000
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201890.0089008200803131000
............................................................................................................................GAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................221815.00815081401000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................231597.00597758710011000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATA...........................................................................................................................................................................251522.00522545203002410010
.......................................................................................................TTGAATATGGTGCAAGCAAG....................................................................................................................................................................................................201479.004791388019321761024
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................201478.00478140702203214110
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................221439.004398258013702411010
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191397.003970369026011000
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................201369.00369036702000000
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211297.002970262028151000
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................191295.00295029302000000
................................................................................TGGGATAC-ACCCTGTGCTCGCC........................................................................................................................................................................................................................221290.002900710273000000
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231289.002890264121021000
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221286.00286028105000000
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221260.002600236070116000
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................191246.002466910145031000
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................181215.00215420306011000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231215.00215020109041000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATTT..........................................................................................................................................................................261207.00207119603115000
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191201.002011183030122000
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................181186.001860171014010000
............................................................................................................................GAACACAGCTGGTGGTATCCAATT...........................................................................................................................................................................241182.00182018200000000
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................201163.00163015301054000
.............................................................................................................................AACACAGCTGGTGGTATCCAAT............................................................................................................................................................................221162.00162015811011000
.................................................................................GGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................201157.00157015403000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................241151.00151014460100000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAAT............................................................................................................................................................................251150.00150014901000000
..................................................................................GGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................201149.00149014801000000
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................201133.00133013201000000
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211130.001301700420143000
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................201117.00117011203020000
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231109.00109110800000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................221100.0010039201031000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................23183.008308300000000
................................................................................................................................ACAGCTGGTGGTATCCAAT............................................................................................................................................................................19180.008007108001000
.................................................................................GGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................19178.007807800000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................23171.0071945012032000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAAA...........................................................................................................................................................................25170.007005402067010
...........................................................................................................................TGAACACAGCTGGTGGTATTTT..............................................................................................................................................................................22265.50131012200063000
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................21165.006506500000000
...........................................................................................................................TGAACACAGCTGGTGGTATTA...............................................................................................................................................................................21162.006205601032000
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................21153.005303900068000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATC...........................................................................................................................................................................25152.0052025022032000
............................................................................................................................GAACACAGCTGGTGGTATTT...............................................................................................................................................................................20149.004904900000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATG...........................................................................................................................................................................25147.004723608010000
..............................................................................................................................ACACAGCTGGTGGTATCC...............................................................................................................................................................................18147.004704403000000
............................................................................................................................GAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................23147.004704700000000
................................................................................TGGGATAC-ACCCTGTGCTCGT.........................................................................................................................................................................................................................21144.004404000004000
.................................................................................................................................CAGCTGGTGGTATCCAAT............................................................................................................................................................................18144.004403903011000
.................................................................................GGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................22144.004404301000000
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................20143.004313703020000
...........................................................................................................................TGAACACAGCTGGTGGTATCTTT.............................................................................................................................................................................23142.004203902001000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAG............................................................................................................................................................................24139.0039322012020000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATAA..........................................................................................................................................................................26137.003703300013000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................24133.003303300000000
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................22133.003303300000000
................................................................................TGGGATAC-ACCCTGTGCTCGCTTT......................................................................................................................................................................................................................24133.003303201000000
.............................................................................................................................AACACAGCTGGTGGTATCCAA.............................................................................................................................................................................21131.003103100000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAACC...........................................................................................................................................................................25128.0028017110000000
droPer2
TGTCCGCGCTGA--GCTTTC--AGCTG---AAAGC---T-C-------TTCCGTGTCTCGTGTCTCTGTGCAACTGCCGTTGGGATAC-ACCCTGTGCTCGCTTTGAATATGGTGCAAGCAAGTGAACACAGCTGGTGGTATCCAATGGCCGTT-CTG---CAACAATGCA--------ACATCAGC-AACAACAAC---------AGCAA------------------CGAGA----------------------------AC--------------------AACAA----------------------------CASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................21225441.50508838583367416543081722733
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................20219684.00393682642505416373971633132
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAT............................................................................................................................................................................24213424.00268486271469499385657391833
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19210607.00212141113212164854732769
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2225517.001103410574112114191563515
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................2321973.503947143310221730599
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2121005.5020111114100117316157
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................222854.00170807971336550726
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................202689.001378013720141
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................202635.5012710919052147153
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................212474.009480477012429948
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................182440.5088106900351488
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................192425.0085008420143
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATT...........................................................................................................................................................................252359.50719349305812837
............................................................................................................................GAACACAGCTGGTGGTATCCAAT............................................................................................................................................................................232234.0046804560750
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................242222.0044432406729429
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................182208.5041704110141
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................212169.0033803360110
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................222155.0031032070293437
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................212103.5020701020236616
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................212102.5020501650111217
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATA...........................................................................................................................................................................25281.50163092033335
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................20275.00150066021585
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................23274.0014894520020
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................21257.0011401120110
............................................................................................................................GAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................22253.0010601040110
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................20247.0094062011156
.......................................................................................................TTGAATATGGTGCAAGCAAG....................................................................................................................................................................................................20247.00940462121816
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAC............................................................................................................................................................................24246.50931440112179
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................22235.5071029016233
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................19233.006604306134
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................22227.00540410274
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAG............................................................................................................................................................................24227.00542450250
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................19226.50530500210
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................20225.50510510000
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................21224.00480420420
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................22224.00480470100
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................24222.50454410000
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................18221.504302704120
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................21220.004021005185
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................22219.50395300130
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................19219.50390250176
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................19218.00360350010
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................23217.50356161282
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAAA...........................................................................................................................................................................25217.003401102174
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................20217.00340230083
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATTT..........................................................................................................................................................................26216.00320290012
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................23216.00320250250
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................24214.00282170000
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................21213.0026070388
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAAT............................................................................................................................................................................25211.50230210011
..................................................................................GGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................20211.50230210110
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................24210.50212100000
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................18210.00200180110
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................2029.50190150220
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................2028.50170110060
...........................................................................................................................TGAACACAGCTGGTGGTATTTT..............................................................................................................................................................................2228.50170160001
.............................................................................................................................AACACAGCTGGTGGTATCCAAT............................................................................................................................................................................2228.50170140210
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATAA..........................................................................................................................................................................2628.5017090062
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................2028.00160150100
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................2328.00160130021
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................1927.50150102120
............................................................................................................................GAACACAGCTGGTGGTATCCAATT...........................................................................................................................................................................2427.50150150000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATG...........................................................................................................................................................................2527.00141120100
.................................................................................................................................CAGCTGGTGGTATCCAAT............................................................................................................................................................................1826.00120110010
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................2326.0012060132
...........................................................................................................................TGAACACAGCTGGTGGTATTA...............................................................................................................................................................................2125.5011070310
...........................................................................................................................TGAACACAGCTGGTGGTATCCAATC...........................................................................................................................................................................2525.5011040421
..............................................................................GTTGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2425.5011010352
.................................................................................GGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................2025.50110110000
droWil2
TTTCAATGCTAAAAGCTC------CAA---AAAGC---TTTCTAGATTCT-TC-------------TGTGCAACTGCCACTGGGATAC-ACCCTGTGCTCGCTTTGAATATTGTGCAAACAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TTT-TGCATCCATGCA--------ACACCAAA-A-----------------GATAA------------------A---TATTCTTCGCCAGG-A-----------AAGG--------------------CACTC----------------------------CASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2411333010.00133301012997713123473331899
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211677503.0067750355755272896111529945641
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201317329.003173292558683090278116929609
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................231176060.00176060161995129563931067
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................221111925.00111925633212774248216820212
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................24196517.00965179649915003
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................24178470.00784707843038002
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................25147143.004714344717224913173
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19131464.003146453911216951910013285
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................25120295.0020295195166782198
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................24113224.0013224127904051028
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2216754.00675448451057335814
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2214566.004566262799881141539
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................2313996.00399635893441368
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2113879.00387919641193304688
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................2012999.002999129650033
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................2212944.0029442847540043
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1812725.002725989980510741
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2312491.00249122487002
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2111900.001900585676112626
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................2611598.0015981386211100
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................2211583.00158390135051326
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTG...........................................................................................................................................................................2511560.0015601486310043
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2111517.00151701508009
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2011109.001109172588185326
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1911070.001070710410022
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2211018.00101801017001
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................251630.0063060225003
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................211556.005560349406161
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................181453.0045304390014
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................201436.004366819772162
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................201418.004182109103294
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231416.004161361873090
...........................................................................................................................TGAACACAGCTGGTGGTATCCACC............................................................................................................................................................................241358.00358322140022
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211348.003483310454202
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211319.003190316012
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211293.002931034470139
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................261282.0028221165105
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................231234.00234971102025
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTA..........................................................................................................................................................................261203.002031967000
...........................................................................................................................TGAACACAGCTGGTGGTATCCACCA...........................................................................................................................................................................251200.002001936001
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................191190.0019016371118
............................................................................................................................GAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................241182.001820182000
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231164.0016401312427
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................211156.0015651041046
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................251142.001424696000
.............................................................................................................................AACACAGCTGGTGGTATCCAGT............................................................................................................................................................................221134.001341131002
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201133.0013308118133
...........................................................................................................................TGAACACAGCTGGTGGTATCCACA............................................................................................................................................................................241124.0012453231047
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221118.0011811011015
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTC..........................................................................................................................................................................261115.001159816001
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAC............................................................................................................................................................................241113.001131121000
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191104.0010410473143
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191100.00100191008
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAA...........................................................................................................................................................................25196.00968610000
...........................................................................................................................TGAACACAGCTGGTGGTATCCCC.............................................................................................................................................................................23196.009625170054
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................20194.009445150034
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................19194.009435110048
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTTT.........................................................................................................................................................................27193.00935636001
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTCC..........................................................................................................................................................................26183.00837310000
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................23176.00769470020
droVir3
TGTCCATGCTAA--GCTTTC--GCTAA---AAAGC---T-T-------TTTC--------------AGTGCAATTGCCGCTGGGATAC-ACCCTGTGCTCGCTTTGAATT--GTGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT--GGC--AGCCAATGCA--------ACAATTGC-AACAA------CTGC-A--ACAACAACAACTGCAACA-------------------------------------AC-----AACAACTGCAACAGCAACAACAACAACGAATACTGCAACAACTTGAGGCASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211832938.00832938150634130885199883248697621767231032354804199701601651251910729598111911158461096739322960822722201174798084124067647167213091312453324152258326927272587176821251622327711222200214201412115372401965660085465703138164416601276448461453742355359924963125952558510351286
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................241357096.003570961039331114688220827697442193141600127608624271214396118721444298218196208322281127204602533364481341513002101111241030221591512133119153532819510188122609394614443504597489363102109116174200
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201278178.002781782896937435665477724021334413221462772428635155354470291255706874457426191059674119692575275243902681704614853626415493714208111671051851798773227012011430024015071159411213073283126601134906458100013811011629144410835620235057
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................221193964.00193964200241297264097493364251157229170226117552541413187383424484185339031683327298101026393363397050243344296145831832569110364021529115814551047469351000002001101021524214330531580248126916775265282341175151390694714801212246118159248333
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................231123440.0012344039175298723719541142488110562001602211233882231660192121145511214210913023337244439414732000000000001000301013316149010094215233133172523881305129225041729149113137206234
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................191106330.001063302012269022854262621124299561598854817112914451167190523001923166734063397662159116592470144931431022929657795643211311029171150712753150911000101200130131113741441315838782208060541309920637232823425225882
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................24125511.00255111259812786481000010000000000001000000000000000000000000000000000001000060001071594121910100
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................25118482.00184823438632443402600111010007775356924640721331814292281731711101121000004001030201109407010415203625451684542734175760301326
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................24116401.0016401652297315354001000000021100101901000000100000000000000000000000000012130000112324100002
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................22113898.0013898263002124151351114231610093367142874980155246180212636318718727422228230516745310451010664357020101011050210161857102299144483716033272771542052424294664
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................21112607.00126079986953846978228429525114620215424628318417347840345911071681272141093225752422074165353358162000000000000000000046771890167314131325242663921943915
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................20111576.0011576111134310100000000543911711015098710182110212140113100000000000000000000123116801011020000002
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2219249.00924920521485218218813242500055151699510087412052191051468632117289782681942231519161825000001000000000000071711030374999976585858453110805735386877
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2117968.007968250271191313201111232441810479846759462421381543421418933223374126641623501546348051841311041000000000000000000138530105622637631519104111113223
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2317944.0079440077561000010100000010204200000000000000000000000000000000000000015218000010100400000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................2517103.007103208022141030900000000005241193727430639806816546032213710001100100000020000131090313132417141822181041612562481573812
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................2415167.005167224215275785000021100132361418140120203142000100001100000000111050110011432141815881269782143102754712
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2114761.004761004672000000000000215110210112034020110211000000000000000000001402030000000000101000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................2513703.00370399067113337110001000023475151134348930022121161130000000040000000000000000000021926500021352949613200000
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1813433.003433209362168321114402001016202337153827587517253538328017639941119141921111213000000000000000000059078032211592158720022
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2213289.00328901326000000100000000000000000000000000000000000000000000000000010251000000000000000
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1913230.0032300031420000000000043222101112133227713001202000000000000000000000010213100000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................2312912.002912562985810512127128108233361751311013101268516870182985215177224991010000000000000000000102018742101853616228151691520183247
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................2212850.0028503591722455151372114000109103821941642471757360177141135159387001330111822000000000000000000013880065647101310171631112
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2012452.0024525265123033228204001012122116301227334131316201628139247635358661635000000000000000000032898600801000201000010
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................2211920.0019209235941306100110010121021312615002210510813101000001001000000000111220211622169195312131814121815
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................2411799.00179943136780302005331001131112612132971897001311270117138226102450000000000000000000070006820375284507151916132327
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................2011782.0017822217312429404102545108141410511161551449470204516381021112517415412522110000000000000000000511017001274510412221139
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................2111285.001285235826230000286100233022236326764024291121123163253138604000000000000000000016169011447000000011354
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................2311242.0012425146002110100000020274413071023241560730101000000000000000000000007200212121002400042
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................1811162.0011620011160000000000001030113401231191402110001000000000000000000005100000000000000000
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................2111103.00110300382510135128200149281936432677055111510171623181624162413680010000000000000000243500213674000000446117
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................261977.009772030103000000000102427920193103677717389868332927156325012400000000000000000000011139510331185781041000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAAA...........................................................................................................................................................................251952.00952306612010000210400000201057855121462202750677613462390000000000000000000010002881326301000041218
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................261888.0088875179271010000000002832134218240285303613104510100010000000000000000100000000015900031514107600000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231873.0087356343732010410002111201931123103065012121615818818332264200000000000000000000016801325020124500002
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAAA.........................................................................................................................................................................271579.00579793000010000000850341205120194053620102130523033114001000000000000000000100514140613726151220101
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231533.0053301177311000310002435132619172423917776623122210301000000000000010000003014504501201001001103
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191517.0051767112002000100111444052582188275718515156182529104200000000000000000000127700212100000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211496.00496444088127291000126374412210101338235882171775636200000000000000000002901300000101000000010
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191483.00483004360000000000022104401210200464800110010000000000000000000003000000000000000000
............................................................................................................................GAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................241401.00401003930000000000001000000000000000000000000000000000000000000000051000000000100000
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................211380.003805162150000000000024221333313211820540220300300000000000000000000491700000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTC..........................................................................................................................................................................261367.00367443849000000000001126487110225101022911330020000000000000000000000000000111900033133200000
.............................................................................................................................AACACAGCTGGTGGTATCCAGT............................................................................................................................................................................221363.00363003620000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201352.0035200136016231400114132555412422238114202942102500000000000000000000184101163100000001111
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTCC..........................................................................................................................................................................261352.00352903782002000000003151051001115000115531600000001000000000000000000000014000052125101000000
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211313.00313003040000000000010000001101100000000000000000000000000000001001000000002000000000
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221283.00283002710000001000010020001010100120000000000000000000000000000001000000000000000001
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTG...........................................................................................................................................................................251259.0025949100570000000000040212301601070100200000000000000000000000000002100101114522300000
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................191251.00251771091130100000000012101113101200316140010250000000000000000000013000000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTCT..........................................................................................................................................................................261251.002513643720000000000033112205211011042260100000000000000000000000000010000002361261400000
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221247.00247979201200001010319455561324332613312140101300000000000000000000018400210000000000000
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................201214.00214001980000100001010120010210000010200101000000000000000000000000010000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTAA.........................................................................................................................................................................271205.00205008000000000001413450590415251600001101614520000000000000000000000000231410125320600000
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................201201.00201001940000000000000010100100000001100000001000000000000000000000100000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTA..........................................................................................................................................................................261194.001943025130100000000063364409130247601133000501000000000000000000000000103000152551210000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................251191.00191001860000000000000000001000000000000000000000000000000000000000000000010200100000
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231189.001891061000010100000014682407802121135400101002000000000000000000001302100000010000000
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................201186.001860056012100000005251052011910031615419010000010000000000000000000018500300000000000000
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211167.00167109801000000000420333035024414711100000000000000000000000000004400200000000000000
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................181150.00150021320000001000000011202201000130000000010000000000000000000001000000000000000000
.............................................................................................................................AACACAGCTGGTGGTATCCAG.............................................................................................................................................................................211140.00140001380000000000000000000200000000000000000000000000000000000000000000000000000000
.......................................................................................................TTGAATT--GTGCAAGCAAG....................................................................................................................................................................................................181139.0013900700480002000449231461385455634305300451000000000000000000002000001005102000000
................................................................................TGGGATAC-ACCCTGTGCTCGCTA.......................................................................................................................................................................................................................231135.0013500410100000000000001100312466001050335110000000000000000000001100675400000046484
..............................................................................................................................ACACAGCTGGTGGTATCC...............................................................................................................................................................................181128.0012819710000100001043142408502001121220011000000000000000000000000000000000000100000
...............................................................................................................................CACAGCTGGTGGTATCCAGT............................................................................................................................................................................201124.00124136900000000000000000001000100000000000000000000000000000000000480000010000000000
............................................................................................................................GAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................241120.001200010500000000000000000000000000000000000000000000000000000000000141000000000000000
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................211113.00113101080000000000001000101000000000000000000000000000000000000000001000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................191113.001132626600000010000000000100100201300000000000000000000000000000045000000000000100000
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................201106.00106001030000000000000100000000000010000001000000000000000000000000000000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTC..................................................................................................................................................................................181106.001063124320000000000000110131200000120101000001000000000000000001001000000000002000000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................231101.0010101960000000000000000001000000000000000000000000000000000000000001001000000000010
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................24199.009920920000000000000000000100000000000000000000000000000000000000030000000010000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAA...........................................................................................................................................................................25199.0099341870000000000011100000100221000000021000000000000000000000000001082215132000012
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................20198.00988103200000000000110100012033200423101211100000000000000000000112100110100000000100
............................................................................................................................GAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................24190.009000900000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TGTCTTCGCTAA--GCTTTTTCATCTGAG-TAAGC---TTT-------CTCTC-------------TGTGCAATTGCCGCTGGGATAC-ACCCTGTGCTCGCTTTGAGTTT-ATGT-TGCAAGTGAACACAGCTGGTGGTATCCAGAGGCCGTT--GAC--AGCCAATGCA--------ACAACAGC-AACAACCAC---------TACAA---------CAACG---ACGA---------------------------------------CGACAGCAACATCAACAA----------------------------CASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211340221.00340221298491403118121527578936347
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201148621.001486211238502447506973124924798
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19199510.0099510731782559467121284564026
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................22191657.0091657840192911906245311691819
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................24182152.00821528057111262342761205
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................23144387.004438744157052477259
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................20114663.001466314632169114
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2119962.00996282381263073250300
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2216016.0060164883529855138241
............................................................................................................................GAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................2315388.005388538300410
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2115268.005268526401111
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1915141.005141512404931
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2114501.0045013556104239337152113
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2214036.0040363124836835467115
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2213519.003519351900000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2413131.003131305901420353
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................1813058.003058304205830
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2012998.0029982302524729318133
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................2012837.002837182822873913326
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAA...........................................................................................................................................................................2512692.0026922597039271217
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1812301.0023011822101822302235
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAT...........................................................................................................................................................................2511387.0013871364071033
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................2111283.001283111004862558
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................2411177.0011771144077181
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................2211084.001084902484352039
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221755.007557120515716
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231712.007126720716611
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................231650.00650623246132
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................211640.0064054812031238
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................251538.0053853201041
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191514.0051450502340
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................211506.00506362040621230
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................201498.004983143138552733
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231456.004564060192425
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................251436.0043642901420
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................201408.0040840601100
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221404.0040431903133219
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAAA..........................................................................................................................................................................261388.003883113939323
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231338.0033828101925013
...........................................................................................................................TGAACACAGCTGGTGGTATCCACT............................................................................................................................................................................241335.0033527011625419
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211325.0032532400100
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211322.00322114271117216
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191284.0028419632542216
...........................................................................................................................TGAACACAGCTGGTGGTATCTC..............................................................................................................................................................................221280.00280251061328
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................241268.0026826700010
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................231249.0024924900000
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................231246.0024624401100
.............................................................................................................................AACACAGCTGGTGGTATCCAGA............................................................................................................................................................................221243.0024324200010
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................211223.0022322300000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................231201.0020114601516519
...........................................................................................................................TGAACACAGCTGGTGGTATCCATT............................................................................................................................................................................241200.002001650131408
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................201182.0018218101000
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................201171.0017116900011
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201165.0016511002011024
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................181163.0016315603400
.............................................................................................................................AACACAGCTGGTGGTATCCAG.............................................................................................................................................................................211162.0016216100001
.......................................................................................................TTGAGTTT-ATGT-TGCAAG....................................................................................................................................................................................................181152.00152120647105
............................................................................................................................GAACACAGCTGGTGGTATCCAGAA...........................................................................................................................................................................241151.0015115100000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAG...........................................................................................................................................................................251148.001481092719110
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................211144.001449016516116
..........................................................................................................................GTGAACACAGCTGGTGGTA..................................................................................................................................................................................191143.001431110813011
...........................................................................................................................TGAACACAGCTGGTGGTATCCTC.............................................................................................................................................................................231141.0014112804324
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................191137.001373301412780
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................221136.0013612113452
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGATT..........................................................................................................................................................................261122.0012211701202
............................................................................................................................GAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................231122.0012212200000
............................................................................................................................GAACACAGCTGGTGGTATCCAGAT...........................................................................................................................................................................241112.0011211200000
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................191104.0010410400000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAAT..........................................................................................................................................................................26196.00969301200
................................................................................TGGGATAC-ACCCTGTGCTCGCTTT......................................................................................................................................................................................................................24188.00888411101
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................20178.00786106911
...........................................................................................................................TGAACACAGCTGGTGGTATCCTTT............................................................................................................................................................................24175.00756202704
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAC...........................................................................................................................................................................25175.00756901131
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAGG..........................................................................................................................................................................26166.00665003706
..............................................................................................................................ACACAGCTGGTGGTATCC...............................................................................................................................................................................18165.00656200030
...........................................................................................................................TGAACACAGCTGGTGGTATCCATC............................................................................................................................................................................24164.00646000211
...........................................................................................................................TGAACACAGCTGGTGGTATCTTT.............................................................................................................................................................................23161.00615401501
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................18157.005743010400
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAT............................................................................................................................................................................24157.005722141767
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................26155.00555400100
...........................................................................................................................TGAACACAGCTGGTGGTATCCCC.............................................................................................................................................................................23154.00545101002
...........................................................................................................................TGAACACAGCTGGTGGTATTTT..............................................................................................................................................................................22253.0010687044011
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................25151.00515000100
..........................................................................................................................GTGAACACAGCTGGTGGTATCT...............................................................................................................................................................................22151.00513604209
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................19151.0051131172000
............................................................................................................................GAACACAGCTGGTGGTATCCC..............................................................................................................................................................................21150.00504900100
...........................................................................................................................TGAACACAGCTGGTGGTATTA...............................................................................................................................................................................21148.00484122102
.................................................................................GGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................20147.00474600010
...........................................................................................................................TGAACACAGCTGGTGGTATCCTCC............................................................................................................................................................................24146.00464400101
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGCT...........................................................................................................................................................................25146.00464301101
...............................................................................................................................CACAGCTGGTGGTATCCAGA............................................................................................................................................................................20144.00444200020
...........................................................................................................................TGAACACAGCTGGTGGTATCCATTT...........................................................................................................................................................................25141.00412404805
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................24140.00403501130
................................................................................................................................ACAGCTGGTGGTATCCAGA............................................................................................................................................................................19138.00383800000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................25137.00373500011
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................25137.00373600010
..............................................................................................................................ACACAGCTGGTGGTATCCAGA............................................................................................................................................................................21137.00373700000
...........................................................................................................................TGAACACAGCTGGTGGTATAT...............................................................................................................................................................................21135.00351544624
............................................................................................................................GAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................22135.00353500000
..................................................................................GGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................20134.00343001120
................................................................................TGGGATAC-ACCCTGTGCTCGCC........................................................................................................................................................................................................................22133.00332021271
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAAAA.........................................................................................................................................................................27133.00332600304
.................................................................................GGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................22132.00323200000
..............................................................................................................................ACACAGCTGGTGGTATCCA..............................................................................................................................................................................19130.00302801001
droGri2
TGTCCCCACTAA--GCTTTC--GTTGA---AAAAAAGCT-T-------TTCGC-------------TGTGCAATTGCCACTGGGATATTGCCCTGTGCTCGCTTTGAATATTGTGTAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CGCACATGCA--------ACAACAAC-AACAA------GAGC-A--ACAACTACAGCAACAACT-------------------------------------AC-----AACAACAGCAGCTGCAACAACAACCAGGGCGATTGCAAGT-------GCCSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................2111478.001478140276
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2411094.00109410904
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201536.0053649244
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................191391.0039135041
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................221348.003483408
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................231230.002302273
................................................................................TGGGATATTGCCCTGTGCTCGCT........................................................................................................................................................................................................................231160.001601564
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................251134.001341340
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................231100.001001000
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................21175.0075741
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................20172.0072720
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................22137.0037352
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................18128.0028280
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................21127.0027270
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................19125.0025250
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................20122.0022193
.................................................................................GGGATATTGCCCTGTGCTCGCT........................................................................................................................................................................................................................22122.0022220
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................22118.0018180
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................18116.0016160
................................................................................TGGGATATTGCCCTGTGCTCGC.........................................................................................................................................................................................................................22113.0013130
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................24113.0013130
............................................................................................................................GAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................24112.0012120
................................................................................TGGGATATTGCCCTGTGCTCG..........................................................................................................................................................................................................................2118.00853
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................2218.00880
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................2517.00770
.......................................................................................................TTGAATATTGTGTAAGCAAG....................................................................................................................................................................................................2017.00734
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................2015.00550
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................2615.00550
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2115.00541
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................2314.00440
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2514.00440
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2114.00440
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................2014.00422
.............................................................................................................................AACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2214.00440
................................................................................TGGGATATTGCCCTGTGCTCGCTT.......................................................................................................................................................................................................................2413.00330
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTTT.........................................................................................................................................................................2713.00330
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................2313.00330
................................................................................TGGGATATTGCCCTGTGCTC...........................................................................................................................................................................................................................2012.00220
.............................................................................................................................AACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2112.00220
.................................................................................GGGATATTGCCCTGTGCTCGC.........................................................................................................................................................................................................................2112.00220
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................2412.00220
................................................................................................................................ACAGCTGGTGGTATCCAGT............................................................................................................................................................................1912.00220
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................1912.00220
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................2212.00220
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................1912.00220
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................2112.00220
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................2612.00220
...............................................................................................................................CACAGCTGGTGGTATCCAGT............................................................................................................................................................................2012.00220
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................1812.00220
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................1911.00110
...........................................................................................................................TGAACACAGCTGGTGGTATAGT..............................................................................................................................................................................2211.00101
............................................................................................................................GAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................2511.00110
................................................................................TGGGATATTGCCCTGTGCTCGCTTTTG....................................................................................................................................................................................................................2711.00110
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2311.00110
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAT..........................................................................................................................................................................2611.00110
..............................................................................................................................ACACAGCTGGTGGTATCC...............................................................................................................................................................................1811.00110
................................................................................TGGGATATTGCCCTGTGCTCGCTTTTT....................................................................................................................................................................................................................2711.00110
.................................................................................GGGATATTGCCCTGTGCTCGCTG.......................................................................................................................................................................................................................2311.00110
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................2311.00110
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................2211.00110
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................2011.00110
..............................................................................................................................ACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2111.00110
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................2611.00110
...........................................................................................................................TGAACACAGCTGGTGGTATGG...............................................................................................................................................................................2111.00110
........................................................................................................................AAGTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2711.00110
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................2511.00110
...........................................................................................................................TGAACACAGCTGGTGGTATCGG..............................................................................................................................................................................2211.00110
................................................................................TGGGATATTGCCCTGTGCT............................................................................................................................................................................................................................1911.00110
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................2011.00110
................................................TTCGC-------------TGTGCAATTGCCAC...............................................................................................................................................................................................................................................1911.00110
............................................................................................................................GAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................2211.00110
................................................................................TGGGATATTGCCCTGTGCTCGCTGG......................................................................................................................................................................................................................2511.00110
...............................................................................CTGGGATATTGCCCTGTGCTCGCT........................................................................................................................................................................................................................2411.00110
..............................................................................................................................ACACAGCTGGTGGTATCT...............................................................................................................................................................................1811.00110
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................1911.00110
.............................................................................................................................AACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................2311.00110
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTGTT.........................................................................................................................................................................2711.00110
...............................................................................................................................CACAGCTGGTGGTATCCAG.............................................................................................................................................................................1911.00110
...........................................................................................................................TGAACACAGCTGGTGGTATCCTA.............................................................................................................................................................................2311.00110
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2411.00110
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................1821.00220
.....................................................................................TATTGCCCTGTGCTCGCT........................................................................................................................................................................................................................1811.00110
................................................................................TGGGATATTGCCCTGTGCTCGCTG.......................................................................................................................................................................................................................2411.00110
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................2011.00110
..............................................................................................................................ACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................2211.00110
............................................................................................................................GAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................2311.00110
...........................................................................................................................TGAACACAGCTGGTGGTC..................................................................................................................................................................................1820.50101
..............................................................................................................................................................................................................................................................................ACAACAGCAGCTGCAACAAC.............................2050.20110
.....................................................................................................................................................................................AACAAC-AACAA------GAGC-A--ACA.............................................................................................................19200.05110
droAna3
TGTCCGCGCTGA--GCTTTCG-CGCGA---AAAGCTCAT-T----------TG-------------TGTGCATCGGCTGCTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TTG---CATCCTTTCA--------ACTT----------CAAGGATAAC-AA--C---------AGCAACAACAACA-----------AC-----------------AGC--------------------AACAA----------------------------CASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211248773.00248773170977237149080482163644
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................22173102.00731024152151101348107929093
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................20166679.0066679372565674235237522750
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19132034.003203411193135097197313767
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................24113012.001301211834154010392829
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2319718.0097189424701433240
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2219002.0090025875001792962652
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2218080.00808060981324201591388
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2117841.0078415717005263201278
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................2016799.00679967570010032
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2012658.002658149210287208670
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2112287.0022871006001561221003
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2112093.0020932070003119
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................2511562.0015621267601519255
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1811560.001560862101157575
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................2111486.001486919204638481
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1911259.0012591239005114
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................231860.0086086000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231809.0080963000620153
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201702.00702517005310824
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................221692.0069269200000
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231647.00647600408233
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231610.0061042600616162
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................231597.0059716600614411
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................211566.0056640601515454
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211561.0056156010000
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221481.0048137300262854
.......................................................................................................TTGAATGAAATGCAAGCAAG....................................................................................................................................................................................................201440.00440214104666113
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................181427.00427413002012
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211373.0037356005562200
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................251368.003682591015102
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................201359.003598201195252
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................201320.00320132003616136
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................241312.0031230310008
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................221274.00274243011128
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191261.00261246003111
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221254.00254239001311
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211250.002501381052104
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................231230.00230205000124
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................201224.0022422200200
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................211208.0020819900009
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................191155.001551100245115
................................................................................TGGGATAC-ACCCTGTGCTCGCTTT......................................................................................................................................................................................................................241154.0015414800033
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191146.00146440021972
................................................................................TGGGATAC-ACCCTGTGCTCGCTA.......................................................................................................................................................................................................................231140.0014013900001
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................221128.00128600031532
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................181121.00121450013063
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................261120.0012011900001
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................20199.0099240012459
............................................................................................................................GAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................24196.00969510000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................24194.009431560214
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................20189.00898600003
...........................................................................................................................TGAACACAGCTGGTGGTATCTTT.............................................................................................................................................................................23176.00766000718
.................................................................................GGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................20172.00726900003
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................23160.00605800002
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................24151.00519001239
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................24150.00504800002
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTG...........................................................................................................................................................................25148.004813001034
.............................................................................................................................AACACAGCTGGTGGTATCCAGT............................................................................................................................................................................22147.00474700000
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................19145.004590013419
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................19144.00444300001
...........................................................................................................................TGAACACAGCTGGTGGTATTTT..............................................................................................................................................................................22243.50876900387
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................26143.004326002114
.................................................................................GGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................22140.00404000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................25137.00373010015
................................................................................TGGGATAC-ACCCTGTGCTCGCTTTT.....................................................................................................................................................................................................................25136.00363400002
..............................................................................................................................ACACAGCTGGTGGTATCC...............................................................................................................................................................................18136.00363100113
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................25136.00363500001
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................18136.00363200004
.............................................................................................................................AACACAGCTGGTGGTATCCAG.............................................................................................................................................................................21134.00343400000
...........................................................................................................................TGAACACAGCTGGTGGTATCAT..............................................................................................................................................................................22133.00336000324
...........................................................................................................................TGAACACAGCTGGTGGTATTA...............................................................................................................................................................................21133.00332500224
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................20131.00313100000
..................................................................................GGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................20131.00313100000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAAA...........................................................................................................................................................................25131.00312002027
.................................................................................GGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................19131.00313100000
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................21129.00291000478
...........................................................................................................................TGAACACAGCTGGTGGTATCCTA.............................................................................................................................................................................23129.002914000114
...........................................................................................................................TGAACACAGCTGGTGGTATAT...............................................................................................................................................................................21128.00281200772
................................................................................TGGGATAC-ACCCTGTGCTCGCA........................................................................................................................................................................................................................22128.00282800000
...........................................................................................................................TGAACACAGCTGGTGGTATTG...............................................................................................................................................................................21127.00271900107
...........................................................................................................................TGAACACAGCTGGTGGTATGT...............................................................................................................................................................................21126.0026900476
..........................................................................................................................GTGAACACAGCTGGTGGTATCT...............................................................................................................................................................................22125.00258000017
droBip1
TGTCCGCGCTGA--GCTTTT--GTCCGAGAAAAGC---T-C-------CTTTG-------------TGTGCATCTGCTGCTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TTG---CATCCTTTCA--------ACTT----------CAAGGATAACCAA--C---------AGCA----------------------------------------AC--------------------AACAA----------------------------CASizeHit CountTotal NormTotal
No Reads
droKik1
TGTCCGCGCTAA--GCTTTC--CACGC---GAAGC---T-T-------TTCCA-------------TGTGCAACTGCCAGTGGGATAC-ACCCTGTGCTCGCTTTGAAA-AACCGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTTTTAG---CATAATTTCAAC--TGCAG--CGAGA-AACCGAAAG---------GATC---------------------------CGCCGGAAGGAA--------------G---------------------GATA----------------------------TGSizeHit CountTotal NormTotal
No Reads
droFic1
TGTCCCCGCTGA--GCTTTTC-CGCGA---AAAGCTGAT-T-------GTCCA-------------TGTGCAACTGCCGTTGGGATAC-ACCCTGTGCTCGCTTTGAATACAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCA--------GCTCCAGA-ATCATCCAG---------GATAC---------------------------TTCTCCG---A-----------AAACT---------------------CAA-----------------------------CSizeHit CountTotal NormTotal
No Reads
droEle1
TGTACTTGCTGA--GCTTTC--CGCGA---AAAGCTGAA-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATAAACTGC-AGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCA--------GCTCCAGATACCTCCA----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTACTTGCTGA--GCTTTC--CGCGA---AAAGCTAAA-T-------TTTCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATAAACTGC-AGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCA--------GCTCCAGA-ATCG-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGTCCCTGCTGA--GCTTTC--CGCGA---AAAGCGCCA-C-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAACTGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-ACG---CATCCTTGCACCCTTGCAGCTCCAGA-ACCGCCAAG---------GACCA------------------------TGCCC--------------------------------------------CACCC----------------------------CASizeHit CountTotal NormTotal
No Reads
droTak1
TGTCCCTGCTGA--GCTTTT--CGCGA---AAAGCAAAA-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATAAATTGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-CGG---CATCCTTGCA--------GCTCCAGA-AACAACGAG---------GATAA------------------C-----TACCCCACCA-------------------TTCGAGTC------------TTCAG----------------------------CASizeHit CountTotal NormTotal
No Reads
droEug1
TGTCTCTGCTGA--GCTTTT--GACGA---AAAGCAAAA-T-------TTTCA-------------TATGCATCTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAATTGCAAGCAAGTGAACACAGCTGGTGGTATCCATTGGCCGTTCTTG---CATCCTTGCA--------GCTCCATT-AACTCCAAG---------GATAA---------------------------ACCATAG---A-----------GAACTT----------------------T----------------------------CASizeHit CountTotal NormTotal
No Reads
dm3
TGTCTCTGCTGA--GCTTTT--TGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCT--------GCACCACAAAACTCCAAG---------GATAA------------------CGAGAATG--------------------------------------------------------------------------------CCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................2111971137.00197113700002629319552983269751392989611530511050191443623273204579364581607314152041410611908661167127090275830793221245971808985329575648118617678552462812351915325594212720000000000000000028112766232114626528455953777315446569161673920104961333325433185801153577320919367566184213760507032055137211364221311961984550519466168976568381255644545434410493403516534321250692009309642550412132519221311915040601013529108580614685069312141534438551041210221212329916344310383974987627205123748652347026361162744519622660651334966413637918437804267625145552576191630914044931326648019002512331991381010022876652018503512553465191455932642247313541933649860661595260811101710236010124218491000524031105503954860231578187989926843278162960362945617873499298790772958996224652224304510068246090642170923024223282913245863787695474330137182810518191028934612540814801037512392976232849971632606432546353735367713461388656226913172431676959817565578159942003165356511144237528374922230321664172515334115832399215341407733619356104458499142091523737194131199342211043170711354959
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201702846.0070284600003265712212124125112523427202301082143561003017602434961877418458610410023665485894113941365151272297987419156251293631897402103248910460296101000000000000000008527927424221022513043710871471200587281378484234358134328541312548259404427219846112044510394735220233116932710798681268213279916596624685274874641495952761706961481242603632079056013583441638274416904014317622417561760917191133095882193477003703518223125010508473478404519921280985878612195825128250783208332633361183147711592111000116728472340000082221002331004354593561394254713519333244311491110345157416343216203151546015933001671645091251032809622605331513350939016271013596129822181358563415603581147488616394876309846609005102329372941858335125080407719021265983789853651487112655894121785179093936247471209112238161082270598402199146510801181340822173720148951890143410263598107711732584101001018952789299301025935914413162131271316864432312082774180321561673235769313886902017
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................191621335.0062133500000000000000414808040155403311434035846151141517238372242291416486589335498119561140627011114921493412815657594581150001131427147000000000000000001355138511626145616041248137831221637663171053146185311652292913929716060349294516674848100211133252121981703784843198106682987838868192560710143549883536842568700176000008012124473620550322451458820122440827917223761950921296471691112273645481801306604143272056184354168793013382653062709061515348998114222561045522473202300788043119000000561201403616047055141717741671108765426326413697423842901093082117182159585100131111423011814384355544610116515610437071419845111141120659265080215451373682105930281169390632708887607301010627350168754178277813329436838458516451210756139901100279666356164921478012716231723182546300115229624248192232189523111912041028848520298478111382083606031986446730818471852244131137165281916356306310601559134518332575216313053206381837
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................221564784.005647840000326581001186220913047042325028225122501029423233230958162593828010512117011195498115710119917338917510513912545425670773791209000000000000000001932195616641041766110203322180233226437994171827661310697638891171906951154842631527531660031953852616489715323109817546613293361282101471136869621063495334507540090062393825238501310110014313771981919395156422926991503953042921522091602972166518887505669472597937208247104322544688284798501054186639273520642311458280153037155312210100076135014000230323247402909497578152886705911941571701531105415342240328280021342010705916218954318746757173221676942122347107241055219920523809357505108824364761767420473018441202485946432883242118033822792152812301195717510054851738103122836296098744769171179219231899833552186835821610968058109016717126422762583821704011441382881314412724791628841116161642379189884893120717142368234123603063724191307557422
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................241110006.001100060000256000103001023193245010400025716313963134326161102724283412916196181915162216292810000991203700000000000000000793747608349701600106564042111104662614933211728106324311221302242330581652713728576410733452122161125279405993481200001217121628000210149144284269016291411225159548342292339719119300315214225550147925833574961148689918713181215031860111195150101571842276151556695314086221800000035494983316013624226876522719122171900133565537390095112224615245117733967380019346484670122559053817133391179387781523787284182774349891889016795321185648474083542840955463456722562131447069420537908531301361171351015727712141744951481559459251146186804401212010332297321716618228811622033428558
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................22187494.00874940000206501024818637521567280974842021021321915584183001626211323544491532211201240613060001191000000000000000009910210331649548119178261070899456107971661659695222211610910778784041292311083454349487217181983425294245957474821742811426121031129304423102013317200011641628312216751123411000132211011485109667996066640255144619858235067216982316560275451117119917561400038053500004181900000043282326745712013055467746974661080166010557284943819000081314213965486154046377907191274341543985563912121442596713839594201224161333337154421639614732771173916119159822129106725038223822674646455146574316593816534882712790166404120147115157129687016071138018727039670410112232317822631575511341117316983386781798150
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................23160857.00608570000300000020176111579000040001771226627021798670010000170000003200000446457920000000000000000010351048870525110000139151011806391132000221425100551047002351186833130631291536421822229331249001261210418000000212654915442248287728421661711921197204429113514000827178209220667629251417570927500851641636569102450000056000003800100013493810401005432555419673927952043937649242200011379348124368211421746921444008126034239788204359234812416203713877264434160441114791769124122219190568032613173600102072565820546547192122810513087332621159753572392674244662642101862751791461469246
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................18148024.0048024000000000000007207250023393200068973267432018230367340243265118524117182311822180009311613000000000000000001631601407579164007199977191012220312893022340320111201907714011885602571418105442716120213357321970332231381168753848139849100549900000000013173817262214753191340166616253552781423452108603402284153373470210061726377514018572742215579301429300120161310000000000003737509871723564105515213165204689266000010608145062128130287232389403641531168013740389781431623114410149760886107627332716099282915102128813156311816411028631547303721131918722222953107131494516325111921164170452121010190598064159686832822067119554290
.......................................................................................................TTGAATGAAATGCAAGCAAG....................................................................................................................................................................................................20127509.002750900006100010011000200741070157828352135154260794910210213766913322289000000000000000000000002492712032061610011911211120035017370032199414154156112301130247050588135429280000000080100002753455419248881283410186191432611720019601062798919266154342207160243316340214025112163325821720050034120000041420142402716161121561272232253832135973035363285147304714138620000331213882620283063114322526165639385020183212497422913353943845715935455590201523811039681114646194816082870451383344209301492601491962182217439824324213095252865811555421614726022159649214941217211121457691821240
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................20124073.0024073000011210000012211018002981800290000000012475112175048352379190100000000000000000000000131479451000022621321169125220451059179225927100188328140102624453990671014718320249158192780000000010000009811379616711061267296550615730043701310214715882353447212331660123811226053976200019081000000700400028191218432413311167727594910317500000215641918129522655111025294339768723358204610210356158106130162241033176916286491210216523614223344139231613656625877311600113361109143471139183721114615283423133321923691118143832314332918611310115667104841466080
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................21123653.00236530000108141001585618204410371429002600000000811998521705766662125333202300000000000000000000045362928142600003781191213191112265216410133470891382946181317465809961098014876611373511953781644944100107843500000021612710220124134121229092655436717037130313397955912630056519035350134540718200028024000000464020008138206034181419181482721022001411610000016741211221115062142118683843425621573221066419369510886170281321172068411558361715522792218610723360221591284162345617001022346214927411533202164111634106169289414461138299624170406844683350325382110
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................21121628.00216280000116150100113121201342011118120248000000008612851201491510164066754210000000000000000000000151521104490001359811333781224466422710105174919964296224456876831511512931119830503166630673941425447000108101100000068204191741654146011313100033149902230035025152668478354010018220157420111720001531240000025000000337723279148712714302100184168800111973996777553665312523932214572931114642262110712722143841381309310893443220820661919310761957272076405313544621006173319287255122930486551528202456825168374114591313737414672123984402271
...........................................................................................................................TGAACACAGCTGGTGGTATCCATC............................................................................................................................................................................24119296.00192960000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001181611125000000001101000000000000000000000000000000000000000010000000000000000000000000000000000000001000
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................22115669.001566900006200002211231040100312200800000000541158231441610033734001000000000000000000000101286301000029142111482055123120013252943340717531725526081517366198249270452506156105971670000020040000001141144143050111400470111862833340196112721324189529513021400432091819327300090200000002500000053664313889242891644340015425400001944226820653944241256903501421223128115221215351325661636268368372715141111141119710537471934328014029449010702227124311251143012417824133616030123945349826651144121124147478088356719911619825
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................21115217.001521700001920000021384151150105100401074305438200173120210180010157103100135100000000000000000111320447000038993411484018178551250051149329227141629823381786028764182261712811493304144010100020050000010325339660000000282123311237013004429124942315981511054689101091930206533133000508000000100000009713223618183562293148673388318938671100122696416859628717016066864551209317315414137115963722648168108454564190835842982142472062945312433231010220725202123401923553165115527425040202213862094914470243811595191108639381243866801231053340
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................20113189.001318900003000001000100400000000001014485325130100001000000040000000427423000000000000000002322400000321021001544140010128217002001222011486561483501138401812513544504650002302910000002120227000000000205400966105504566059538615536118261117034004002353001000000020000001000000003524512157134819914000000000014105247263641002310391209151614310764294326227210445031511123700024222002021121223512210116102022020420110320
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................2219970.00997000006000001101600000001001500000000014312717021001811821000000000000000000000001134201000079006221882820001084716031132325022867111945176302723832637652077502000001000000000313036100110400241034124418601291044241304200299012001900210000105000000210000000001411000100019002229400100615211033181451121714775312391376867288226211710321837411135522801022205160092022181220022622538386402418832211422201145439043874213287210100
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................2017127.007127000010200000102131010015620150000000045832112592173454192620010000000000000000000003546610000314112110131121900096011841342810102023021544211210669551922888300010000500000055102752473110100011270980136043814390498151613112630208017522413003020000000100000036613291044455750211005816100001411262533577254627410814361052191675171925411164381791452281854681511514171024714372251443434080021235172537201771021059567624311326211254370421432826281520019790
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................2516542.006542000010000001004002000002000000000000010200241301110000000000000000000000000001532241120000054001302142800043613009000000006341640125018381902603804800001002400000010201150010179450841912191141480104611072881142356101292430110102890001000304140000011000000101211110333801091316119422210000092636472071129198519123451052225925511867851093812378140105172151341659374396006222927128245863222425346115941569821015163571314171975415562640
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................1916522.006522000000000000001200300004200000000000222242415062000282100000000000000000000000314663210000102710032020111210000641210111075102200007111441035026480694897600000000000000014101110202001005305009917203400365809821330497001311423210000300000000000000002111196113200703170099141000004310691086178108377999222141821722031489115710262514220418868215426681826113544752400419845111181089517567261003590110110143040137928882086600
...........................................................................................................................TGAACACAGCTGGTGGTATCATC.............................................................................................................................................................................2325953.5011907000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011252655000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................2515293.00529300000000001000000190000000000000000001011011120020000000000000000000000000000424010000051100101237400005607005011020056511082510384027386659163000010100000000031019030019185221920100316121901603014528113421339331066505510349001200000000000011000000043133100111310083831751330000002016511612972271892711961229391052591152411254428513842000300151971029664187027310337002128414449112223681091021010038320716673281426280
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................2013433.0034330000000000000000000010120010312828100002120223110000120000520000000000000000005510960000066103404297140002901111450422002223217113097250351422200000000000000012215460000101010000007780030103133133375078100010143217300050100000001000000701136412514211171525007000000001163113628116196124361328133331719410120133294311971898529248421882312118192106176004116881704106116211581378477112211061722271262116119153745870
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1913385.0033850000000000000000010000000010111118791201000100000100000010003530000000000000000030052000000500100084000003070170200000010155145265136316311173098114000100100000000021026000000000100500239259085301179011281221822483700010475203000010000000000000000001051032207631300000000000241221202037120332401632503842310318011801011041275170000310001100062031710000100201640111123140
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................2313255.00325500000000000000000400011300000000000102010010400011011000000000000000000000001115990000001110001007260001141260030010102611516040482711203624000010000000000100001210003572213131013194053034203944169925028701651136002100000100000002000000510320521239110193003602181800000845735162443103175446101933332284261874711146134240101085217111321929830010571302755664451114412882759533024185671022183125133840760
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................2013143.00314300000000000012000410001101334000000042011020502001810000100000000000000000002100900004192330590117132601415984081786101011309270421301061301707170000000000000008001117100000000170764093101944221532352091635057317015363000505000000010000008525623162103610112101121310000000161665532291218328683386141326368261745151654271110601001420711526034599801942550114222885194896375303682021336428311912691423021474015386480
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2113002.0030020000000000000100031000000001551341261000000000000000000000001010400000000000000000362110000011000001421000041010115300100014515401801622961966938200000011000000001001210000000020020020316408911137147614851270176400510620001000000000000001000000001013111842010200030000002505002811121115001002210023050051202010110232319000001000021213524020201102002401731132320500
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................2112878.002878000022000021001000001003003000000000110522310310118350001000000000000000000000210090000001000024013632000151025702231197000711763803401864703733828000000001000000200101110001000030150165800380057381240137211110204024611100001000000002000000010000111014022123012000000073012281169612984029457101401441120325164157810505173521163721124145545000100132717123621320151400104311417165123758118180
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................1812506.0025060000000000000000000000000000241198100011000000011110000100086300000000000000000130201000031001002601001060901311250000000113360901761411021161990001000000000000010010000000000407001732660841077864124217601251500710330000000010000000000000000010110121225120310010000000582122411020122221110111225527301516182222012589270000201000003015133100013000201410200215126
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................2412504.002504000030000000011009000000000000000001010000200010002000000000000000000000000021148760000020000600311213000027660010021200121186713901417890320213200000200100000000100290000109162311313171525104000741124154531043400000228101100000010000002000000000021025430254401218003915180000015342022252243276584862014034402112161000100033450620151963007141415012733104430114132153117166120926152010746111
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................1912346.00234600000000000000200000011000000000000200101010100041010000000000000000000000001102000000926002002120011202578020000400227030523010217140000000000000000101130010000000100012639011009915017321342700020950100000100000000000000000018011000000004006000000083487101403353211303182114021010315449055435622715410311009517257000022442004611412002151202330100203641782131040200110
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................2112220.002220000041000010002001700000100002026300003102010101200213200001100000000000000000032221000000410280374622000114130038002310011420610340915692252242800000100300000012110440032013010000005063028001834130231041800020745031000302000000000000002304402313173611137412004010000006294227195450323111918211021325182239222332252138292821050517362942005250310031206826321030825235123100538161104703819300
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGATC..........................................................................................................................................................................2612211.002211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010951116000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................2312074.002074000091000001000012200002000127000000001010011100000010000570000000000000000005322121000114391014250435175300012303131624129121358208300206020527015110700000000000000000100502000000000000024380300220871330262516203000008450100000010000002000000010005071640432835122718201701000005161125141020210254521063231263628144147021101041111893913010112210000014221013001273004031152511581110130
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2312021.002021000000000000000000000000001139166134110100000000000000000000031000000000000000000320100000000000000000000300000000000001181201005731238432380000000000000000000000000000000014010105100069011191661018835125460080043900000002000000000000000000100111195101300011000000000201111002434400000010003002000000000011033228000032010001025213001100011000000100000100000
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................2121628.50325700002000000000100000023300400000000110000280160000300000000000000000000000000010010400000472011880012890010115351278411231000260991021014041390593400000000000000020000120023000007602034253013003026031110416030007090111000010000000010000000606074120111411500190000000113427313131923760311081226130255616030840117541400130032101103423711050020413220021230310112131066006073158491252020551275630
.......................................................................................................TTGAATGAAATGCAAGCAA.....................................................................................................................................................................................................1911556.001556000000000000001000000000003173252200000100001010011100000001000000000000000000423229292000001610110251500104801024020000000120000000082102100100000000000012311130001100007053004649023012927327767281380000185412000030400000020000000220444111011318137125432068000000023011111020004310054442466269746119412070717352020242734013181010182101007867104125101031115414611436310
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................2611498.00149800001000000001100000000000000000000000000001110000000000000000000000000000005152450000300005034040000131700000000000033101044111401272900000000000000000000200000000100000010415208041797539725305050000021200110000000000000100000000002100011000030015242100000131419292322000460522060031811132530100010000801816121501101002100010215001200010101500830330113310
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................2311492.0014920000010000000070020000100010000000000100000010000001100000000000000000000000631362000003000120052300002604009000100202410030312507312800001001000000000000400000020020010025340165123321545414010000000780010000000000000000000001000203005415014100129201690000068113239325170531520002220811165220030003000110212363200001600003014281702092412432019010422339511841051115
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................2411481.0014810000100000000000010000000000000000000000010000102020000000000000000000000000224100000001100200611000022000001000000145011050130121910000000000000000000020000010000100141221701700163001508072000001220000000000000000000000000000000002200001002648315000000201205112105418002301201021000100000000340139411000021000020012612100200001000200301000003110
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................2011341.00134100001000000010000200001000200000000001000030000020000000000000000000000000000100200000000006001300001182062922010000431460510171021217370140000000000000000000021000010001001002447011001327325101140893600020591010000001000000000000000002000000000000003000000051569824187925644414312432911512317639220610614591172114000103100010422100020000001200045432003229130
...........................................................................................................................TGAACACAGCTGGTGGTATATC..............................................................................................................................................................................2211328.00132800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001223101000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................2211201.00120100002200001110710100000000000000000000000000000020000000000000000000000000002101400000190034016110000532281216140400150910000647010038900100002100000000000300000020000000035540430120611112202700000011601200000000000000100000000011020102000013003900000003234161413451111335201269101202603488214280114010101068142300001011000022810011120120660214043662322245840
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................1821091.5021830000000000000031106000001001000000000110100002002010000000000000000000000000049725100011540031101167600124068105185234400008124123804073001013029000000000000000100000000000100000108245601400101314013302910041217500000000000000000000000012000010000000050032100000016104245125142096912032002186273033361430001100011511450216712900001118020000318100021000000000015214345442257010
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................2111070.0010700000110000000000000001000010000000000111016000010260000000000000000000000000314140000006000200321001012002101100001402320604280122121100000000000000001100103100000060040018240140061801003802200031018211100010000000040000000000021000010100000120000000612820132801101133105730415173829071001001181311204539276383000021134010111141006010031008013556265422260290
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................231984.00984000010000000001000000010000000000000011002001101010000000000000000000000000052110100002200100050400001300004020000000320102071906400000000000000010001100001000000000254060061070202200000281000000000000000000000001030310000000017002098110000041959101418531220132141090125038112873450011040015009171225270011001100312210800040324171034170251131596512445510
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................221908.00908000000000000001000000000000013445001000000000000000000000075100000000000000000213000000000000000000000000000000000000139060371403291500000000000000000000100000000000000262500270083593481250390000002570000000000000000000000000000003007000000001000000000020100001210060000003001000000000000000002142200000000000010124000010000100000010100000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTG...........................................................................................................................................................................251896.00896000000000000000002000000000020000000000000000000000000001872667700000000000000000011010000000000000400000030000000000000011020214021410000000000000000000000000000000000005701000101001121105300000420000000000000000000000000000000000000004005000010005333825364130001131100000010400010000000000000108912000201000000211100002001011100021710021222210
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................241888.00888000000000000001001000000001000000000000000200000000000000000000000000000000003110000100100000020300007010010000000005409050101607110000000000000000000000000031010000004132028003034331111657890000023100000000000000000000000000000000000000030012000000000042032011282190220010000510000200000016104681115200001600001000120000200001110100110001010040
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................192762.50152500000000000000300100000000000000000000201120000001010000000000000000000000004111500000687007004330003622210245700000812715061444017015180000000000000000110040010000000064102753070026130211330290000001400200000200000000000000000008301000100041101820000011119567029164212120605301324306711367452315117072131063336559900004186200252323014160000450120126716235236242150
...........................................................................................................................TGAACACAGCTGGTGGTATAT...............................................................................................................................................................................211660.00660000021000000000002000000001000000000200000302001210000000000000000000000000001001000000100010012100007010120000000001950203020509400000000000000000002100000010000010079070051304014071000001900000000000000000000000020001010000110110022000000007201021740631001340002030509022112000210241121774481000001200003010010102021004000010465066322240110
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221636.0063600000000000000000000020000100000000101100110100001010000000000000000000000000000100000210009001120000590014000000054211405082906010100000000000000001000170000000000001101111060014411021201330002040001000000400000002000000020000100000100100100000003234750366501620010221002001624100014000300010011043190000211202010211001201001200101137923482010240
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211613.0061300000000000000000000000000016288000000000000000000000000000000000000000000003002100000720011014140005701661334420000502850206220919900100010000000000000000000000000020023160172131128716334210100014000000000000000000000000000010134886948600300000001034101101103100201312200261213000000003000201010100300000010023000100102000000200000201101
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191573.0057300000000000000000000000100101000000000000000102000010000101000000000000000000201000000100010001001000050001400000000011200010203011000000000000000100025000000100008013026200120011200431706000000622000000100000000000000000000010011211000000000000004210210140100060610041450006101013663123100700148143700002000001010410024000011000001520202000020
droSim2
TGTCTCTGCTGA--GCTTTT--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCT--------GCTCCACA-AACTCCAAG---------GATAA------------------CGGGAATGCCCCATCG---A-----------GAAGTT----------------------------------------------------CSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................2112104129.00210412916883591338016894476851023254987916476542213145731830567612304514
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................241945249.009452497988671279137692505637930361002762778257950267000
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201479650.004796503444923255413041644834461728937853246932801069601212197112
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................231276702.0027670221558452390150633232991817718411343516358493618
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................191198635.001986351053504817766918316171124336522266191937122065336112
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................221180749.0018074911539715234518880514898996176641052134823637151701008101714
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................24188860.008886070440173161065380001000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................24175704.0075704672087905570120071000010000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................24173785.00737855097522086250430001815001109000
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................18156421.00564211317173167104355712814745102978181182100001
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................25144151.0044151350898461312163004961331315000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................25142286.0042286338017865161344007235221003000
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................22126900.0026900223942343834680011004816141019000
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................21110045.00100456593687414410030318982221160221000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................2315598.005598477178121900124000000000
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2015078.005078362525516649003161991017000000
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................1915038.00503847402112620002414003000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................2214753.004753401867721290042011000000
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2113744.00374424183711247300224175199110130100
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................2012715.002715243023096530003004006001
...........................................................................................................................TGAACACAGCTGGTGGTATCTC..............................................................................................................................................................................2212713.00271310000011266911210000000
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................2011449.001449911753134001621434214001000
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2211411.00141143431674291824433101031630212000
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................2211387.0013871198110512004120100000000
...........................................................................................................................TGAACACAGCTGGTGGTATCTCA.............................................................................................................................................................................2311352.001352000000713129160026000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTG...........................................................................................................................................................................2511148.001148881130741410713100000000
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................1811058.00105881369862006837001000000
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................1911015.0010156572157000126903267001000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAA...........................................................................................................................................................................251972.009725813595210000001014000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................261939.009396552594210000000000000
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................191894.00894796728130020003000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................251802.00802684108410041000000000
...........................................................................................................................TGAACACAGCTGGTGGT...................................................................................................................................................................................171777.0077700000037129163104002000
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211754.00754380362212007647001000000
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................191702.00702800586198900000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231640.0064041876394002580100014001
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................211584.005844234109000914000007000
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................211571.00571100515124000000001002
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................261499.004993441201140069014000000
.......................................................................................................TTGAATGAAATGCAAGCAAG....................................................................................................................................................................................................201445.0044548110522717160001130017000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................231438.00438241710480012104500443000
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................231410.0041062038022000000000000
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................181387.0038700033374200004000001
...........................................................................................................................TGAACACAGCTGGTGGTATCTCT.............................................................................................................................................................................231328.003280000002319070000000
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................211293.0029330010823124950013206000
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................221263.0026320024221600000001000
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231250.0025014224018005114000001000
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221247.0024710190200012100301001000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAC............................................................................................................................................................................241223.0022320014900000000000000
...........................................................................................................................TGAACACAGCTGGTGG....................................................................................................................................................................................161217.00217000000495710109001000
................................................................................TGGGATAC-ACCCTGTGCTC...........................................................................................................................................................................................................................191195.0019500002516910000000000
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................201148.00148106901000126005000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGGA...........................................................................................................................................................................251147.0014713215000000000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAAA.........................................................................................................................................................................271144.001449441040003110000000
.......................................................................................................TTGAATGAAATGCAAGCAA.....................................................................................................................................................................................................191143.00143300722101000010000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTA..........................................................................................................................................................................261140.0014010335110000000000000
...........................................................................................................................TGAACACAGCTGGTGGTTA.................................................................................................................................................................................192115.0023020215080023000000000
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191113.00113700924910000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAT...........................................................................................................................................................................251112.001127037030001000001000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................241112.0011261170400730100415000
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211111.0011122022744353002003000
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221103.0010372045103810000000000
...........................................................................................................................TGAACACAGCTGGTGGTATAT...............................................................................................................................................................................211103.001038440300210000000000
droSec2
TGTCTCTGCTGA--GCTTTT--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CATCCTTGCT--------GCTCCACA-AACTCCAAG---------AATAA------------------CGAGAATGCCCCACCG---G-----------GAAGTT----------------------------------------------------CSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211281441.00281441177661709935696325
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................20185818.008581849967307211132668
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................22171401.007140139421251910029361
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19165349.00653493165616115432028
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................24118266.00182661718916827882
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................23114420.001442014053721294
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................2016257.00625762064146
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1815054.0050541943563100
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2014801.004801259929941899
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2214356.0043562459306631528
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2214267.004267209616312007
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2113586.003586208813811359
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2112058.00205892710521024
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2111695.00169516821012
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................2511557.001557145014192
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1911525.00152515103012
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2311232.0012321230101
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................2011219.0012195761052536
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................2411116.00111610658142
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................1811042.00104210210021
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................2111040.00104044412410462
.......................................................................................................TTGAATGAAATGCAAGCAAG....................................................................................................................................................................................................2011021.0010212583405418
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211862.008627694089
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................211839.00839499790261
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................221837.00837837000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231741.00741522200199
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191631.00631249371344
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................251604.00604458211124
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................201384.00384121291233
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201338.00338150701117
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231291.0029117670108
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211283.0028315861118
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211244.00244239203
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221235.002352143018
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221217.0021710911097
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231216.0021616110144
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................231212.002121777028
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................182207.5041512200293
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191205.002051860118
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................231197.0019753180126
...........................................................................................................................TGAACACAGCTGGTGGTATAT...............................................................................................................................................................................211193.0019348420103
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................211153.001533637278
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................221139.00139635071
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................241133.00133132001
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................221125.00125884033
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................191123.001235714052
...........................................................................................................................TGAACACAGCTGGTGGTATTA...............................................................................................................................................................................211104.00104596039
............................................................................................................................GAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................241101.00101101000
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................19197.0097506041
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................20190.009088002
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................26188.008886002
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................20186.008681005
.............................................................................................................................AACACAGCTGGTGGTATCCAGT............................................................................................................................................................................22184.008484000
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................19184.008483001
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................21184.008483001
..................................................................................GGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................20182.008281001
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................20162.0062321029
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................23159.005959000
...........................................................................................................................TGAACACAGCTGGTGGTAAA................................................................................................................................................................................20157.0057206031
.......................................................................................................TTGAATGAAATGCAAGCAA.....................................................................................................................................................................................................19152.0052195028
.................................................................................GGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................20152.005251100
............................................................................................................................GAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................23151.005151000
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................18148.004839009
.............................................................................................................................AACACAGCTGGTGGTATCCAG.............................................................................................................................................................................21144.004444000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAA...........................................................................................................................................................................25142.004238103
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................25139.003939000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................26136.0036224010
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................20136.003636000
............................................................................................................................GAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................24136.003636000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................24136.003631104
................................................................................TGGGATAC-ACCCTGTGCTCGT.........................................................................................................................................................................................................................21132.0032141008
droYak3
TGTCTCTGCTGA--GCTTTT--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CGTCCTTGCT--------GCTCCAGA-AACTCCAAG---------GATAA------------------CGAGAACGCCCC--CG---AGAATGTGCCACGAACTT----------------------------------------------------CSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211402287.0040228726839410625913819846217034196520140
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................241333331.003333312784585382356269115761000173
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................20195056.009505651989310374953705724710200130
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................23176875.0076875542132249713016383400262
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................22164852.006485223701373051241106215654131158
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................24127407.002740727182217401100002
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................24127067.0027067268705014700000000
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19125740.002574017971191500382575886080106
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................25117686.0017686138683752211920150000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................2517229.00722961641046605620000
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2216305.0063053970188300114256820000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................2415815.0058154872939001120000
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................2015630.00563035615001920000
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2314699.00469914698000000000
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2213628.00362842671393369457850000
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2112449.00244912446000110000
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2112356.002356654108400205361520000
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2211898.00189811897000000000
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1811483.0014833018800010120010000
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2011442.001442779690095247540000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................2311407.001407136334001720000
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1911399.00139911395000300000
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2111340.00134027868600125226250000
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................2211103.001103933158003810000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................261863.00863485378000000000
.......................................................................................................TTGAATGAAATGCAAGCAAG....................................................................................................................................................................................................201568.00568182041059199870000
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................211551.005511346405996450000
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................181522.005220519000300000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................231443.0044386348002700000
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................221430.004302695101258220000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................251383.0038335522400200000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTG...........................................................................................................................................................................251371.0037133831100100000
............................................................................................................................GAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................241283.002830283000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................231271.0027160201005500000
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211270.002701268000100000
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231254.00254421930031150000
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................201231.0023122123001955120000
.............................................................................................................................AACACAGCTGGTGGTATCCAGT............................................................................................................................................................................221216.002160214100100000
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191207.002073198200310000
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201201.002010122003128200000
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231191.0019101572082220000
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211184.00184111370082440000
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191171.0017148600265140000
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................201169.00169284001949150000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................251168.0016812151400000001
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................261157.0015751103001200000
..................................................................................GGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................201153.0015313130700210000
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221148.001480145000300000
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................191123.0012389140061400000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGAA...........................................................................................................................................................................251111.001118130000000000
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................181110.0011021710071100000
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................211100.00100271900213120000
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................201100.00100098001100000
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................21194.0094094000000000
............................................................................................................................GAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................24188.0088088000000000
.............................................................................................................................AACACAGCTGGTGGTATCCAG.............................................................................................................................................................................21182.0082082000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAC............................................................................................................................................................................24178.0078771000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTTT.........................................................................................................................................................................27176.00763145000000000
............................................................................................................................GAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................23173.0073073000000000
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................22171.0071448009910000
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................18159.0059057000200000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTA..........................................................................................................................................................................26158.0058508000000000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................24157.0057156000000000
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................21456.002244172001325100000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAT..........................................................................................................................................................................26150.00501039000100000
............................................................................................................................GAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................25144.0044044000000000
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................23144.0044043000100000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................24142.00421022002710000
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAAA.........................................................................................................................................................................27140.00402414001100000
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................19139.0039039000000000
droEre2
TGTCTCTGCTGA--GCTTTG--CGCGA---AAAGCGAAT-T-------TTCCA-------------TATGCAACTGCCATTGGGATAC-ACCCTGTGCTCGCTTTGAATGAAATGCAAGCAAGTGAACACAGCTGGTGGTATCCAGTGGCCGTT-TGG---CGTCCTTGCT--------GCTCCAGA-AACTCCAAG---------GACAA------------------CGAGAATGCCCCACTG---A-----------GAACGT----------------------------------------------------CSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................................................................................TGAACACAGCTGGTGGTATCC...............................................................................................................................................................................211411938.00411938248107240130343712447137937136
...........................................................................................................................TGAACACAGCTGGTGGTATC................................................................................................................................................................................201117095.00117095634713237692158784388935
...........................................................................................................................TGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................221116683.001166837382823171536334537574162
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................24164059.006405956728195241926118644761
...........................................................................................................................TGAACACAGCTGGTGGTAT.................................................................................................................................................................................19152651.00526512657501878446051951772
...........................................................................................................................TGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................23139090.00390903629611460744712192
............................................................................................................................GAACACAGCTGGTGGTATCC...............................................................................................................................................................................2019420.00942093160909860
...........................................................................................................................TGAACACAGCTGGTGGTATCCT..............................................................................................................................................................................2219031.00903154941137140829900
...........................................................................................................................TGAACACAGCTGGTGGTATCT...............................................................................................................................................................................2118518.00851860820262049416800
................................................................................TGGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................2217906.00790640829810840425930
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................2515769.0057695203316032218297
...........................................................................................................................TGAACACAGCTGGTGGTATCA...............................................................................................................................................................................2114841.00484121080174123923181
............................................................................................................................GAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................2314166.00416641082001352
...........................................................................................................................TGAACACAGCTGGTGGTA..................................................................................................................................................................................1813631.003631174702106717933
............................................................................................................................GAACACAGCTGGTGGTATCCA..............................................................................................................................................................................2113454.00345434300203190
...........................................................................................................................TGAACACAGCTGGTGGTATT................................................................................................................................................................................2013014.003014203917502806190
............................................................................................................................GAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................2212482.0024822480000011
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................2512052.002052159132043436535
............................................................................................................................GAACACAGCTGGTGGTATC................................................................................................................................................................................1911995.00199519640201280
...........................................................................................................................TGAACACAGCTGGTGGTATCG...............................................................................................................................................................................2111396.00139611470280281930
.......................................................................................................TTGAATGAAATGCAAGCAAG....................................................................................................................................................................................................2011331.00133131904603546120
................................................................................TGGGATAC-ACCCTGTGCTCGC.........................................................................................................................................................................................................................2111229.00122944727611595440
...........................................................................................................................TGAACACAGCTGGTGGTATCCAT.............................................................................................................................................................................2311122.0011228670602618439
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGA............................................................................................................................................................................241902.0090284342052028
............................................................................................................................GAACACAGCTGGTGGTAT.................................................................................................................................................................................181874.008748610003100
...........................................................................................................................TGAACACAGCTGGTGGTATA................................................................................................................................................................................201762.007623290210733390
...........................................................................................................................TGAACACAGCTGGTGGTATTT...............................................................................................................................................................................211651.00651500011067730
..........................................................................................................................GTGAACACAGCTGGTGGTAT.................................................................................................................................................................................201633.006331700180573880
................................................................................TGGGATAC-ACCCTGTGCTCG..........................................................................................................................................................................................................................201609.006092850760179690
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTT..........................................................................................................................................................................261574.00574566010070
...........................................................................................................................TGAACACAGCTGGTGGTATCCTT.............................................................................................................................................................................231563.005634130301810821
..........................................................................................................................GTGAACACAGCTGGTGGTATC................................................................................................................................................................................211534.005342410120362450
...........................................................................................................................TGAACACAGCTGGTGGTATCCAA.............................................................................................................................................................................231413.004133570214436
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGG............................................................................................................................................................................241399.003993820000413
............................................................................................................................GAACACAGCTGGTGGTATCCAGTT...........................................................................................................................................................................241391.00391389100010
..........................................................................................................................GTGAACACAGCTGGTGGTATCC...............................................................................................................................................................................221383.003833471202310
.................................................................................GGGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................211379.00379379000000
................................................................................TGGGATAC-ACCCTGTGCTCGCTT.......................................................................................................................................................................................................................231364.0036430301008430
...........................................................................................................................TGAACACAGCTGGTGGTAA.................................................................................................................................................................................191364.003641750180461250
...........................................................................................................................TGAACACAGCTGGTGGTATCTT..............................................................................................................................................................................221335.0033525805015543
.............................................................................................................................AACACAGCTGGTGGTATCC...............................................................................................................................................................................191319.003192881402240
...........................................................................................................................TGAACACAGCTGGTGGTATCCC..............................................................................................................................................................................221285.002851331371131000
............................................................................................................................GAACACAGCTGGTGGTATCT...............................................................................................................................................................................201217.00217217000000
............................................................................................................................GAACACAGCTGGTGGTATCCT..............................................................................................................................................................................211211.00211208000030
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAA..........................................................................................................................................................................261208.0020814105010484
...........................................................................................................................TGAACACAGCTGGTGGTATCCG..............................................................................................................................................................................221202.002021640202340
.............................................................................................................................AACACAGCTGGTGGTATCCAGT............................................................................................................................................................................221184.00184183000010
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTG...........................................................................................................................................................................251175.00175850203850
...........................................................................................................................TGAACACAGCTGGTGGTATCCAC.............................................................................................................................................................................231154.00154581409802
..................................................................................GGATAC-ACCCTGTGCTCGCT........................................................................................................................................................................................................................201135.001351171402110
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTTTT.........................................................................................................................................................................271133.001331220000110
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAGT............................................................................................................................................................................251133.00133125200006
.............................................................................................................................AACACAGCTGGTGGTATCCA..............................................................................................................................................................................201127.001271130001130
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGC............................................................................................................................................................................241116.00116693900044
...........................................................................................................................TGAACACAGCTGGTGGTAG.................................................................................................................................................................................191113.00113390301700
..........................................................................................................................GTGAACACAGCTGGTGGTATCCA..............................................................................................................................................................................231110.00110107000030
...........................................................................................................................TGAACACAGCTGGTGGTATAA...............................................................................................................................................................................211109.001094305026350
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTC...........................................................................................................................................................................251105.00105812002173
.............................................................................................................................AACACAGCTGGTGGTATCCAG.............................................................................................................................................................................211103.00103103000000
...........................................................................................................................TGAACACAGCTGGTGGTT..................................................................................................................................................................................182103.0020610001141000
............................................................................................................................GAACACAGCTGGTGGTATCCAGTA...........................................................................................................................................................................24199.009998000010
.......................................................................................................TTGAATGAAATGCAAGCAA.....................................................................................................................................................................................................19191.00912109019420
..........................................................................................................................GTGAACACAGCTGGTGGTATCCAG.............................................................................................................................................................................24189.008981000008
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAT..........................................................................................................................................................................26180.008074010140
.............................................................................................................................AACACAGCTGGTGGTATC................................................................................................................................................................................18178.0078600001170
...........................................................................................................................TGAACACAGCTGGTGGTATCTTT.............................................................................................................................................................................23177.007758010882
...........................................................................................................................TGAACACAGCTGGTGGTAC.................................................................................................................................................................................19177.0077320107370
............................................................................................................................GAACACAGCTGGTGGTATT................................................................................................................................................................................19172.007272000000
...........................................................................................................................TGAACACAGCTGGTGGTATG................................................................................................................................................................................20167.0067440100220
...........................................................................................................................TGAACACAGCTGGTGGTATCCAAA............................................................................................................................................................................24167.0067330103300
............................................................................................................................GAACACAGCTGGTGGTATCA...............................................................................................................................................................................20165.006563000020
...........................................................................................................................TGAACACAGCTGGTGGTATCCAGTAAA.........................................................................................................................................................................27160.0060220102350

Generated: 10/20/2015 at 11:18 PM