ID:

dps-mir-286

 Coordinate:

3:12677589-12677685 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.9 -36.0 -36.0

Flybase annnotation

utr3 [utr3_minus_3618]; pre_miRNA [Dpse\mir-286-RM]; miRNA [Dpse\miR-286-RA]

No Repeatable elements found

Sense Strand Reads

GTACAAGAATGGCGATAAAGTGTGTGTGTCGCAGAAAAAGAAGACAAATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACCAGGGTTCCGATCAAGCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCAACCAGTGACGAAAGTGACAAAAGTGAAAAAAGTGAC

***********************************************((((((((((((....((((.((((((((((((((((((......((...))........))))))))))))))).))).))))....))))))))))))..************************************************ 		Read size # Mismatch Hit Count Total Norm Total M059

embryo

 GSM343916

embryo

 M040

female body

 M062

head

 SRR902012

CNS imaginal disc

 M022

male body		 SRR902011

testis

 V112

male body		 SRR902010

ovaries

 GSM444067

head
...............................................................................................................TGACTAGACCGAACACTCGTGCT............................................................... 23 0 1 197384.00 197384 115522 77397 3833 589 15 13 10 2 2 1
...............................................................................................................TGACTAGACCGAACACTCGTGC................................................................ 22 0 1 99256.00 99256 67140 29785 2251 56 18 2 2 1 1 0
...............................................................................................................TTACTAGACCGAACACTCGTGCT............................................................... 23 1 1 31677.00 31677 31480 34 2 161 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCC............................................................... 23 1 1 29723.00 29723 29350 227 17 129 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGC................................................................ 22 1 1 17901.00 17901 17877 11 1 12 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTG................................................................. 21 0 1 13749.00 13749 6006 6677 1060 0 0 0 5 1 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGCC............................................................... 23 2 1 7808.00 7808 7765 0 0 43 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGCT............................................................... 23 1 1 5858.00 5858 5759 59 0 40 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGT................................................................ 22 1 1 4474.00 4474 1528 2859 86 0 1 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGC................................................................ 22 1 1 3113.00 3113 3089 22 0 2 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCTT.............................................................. 24 1 1 2419.00 2419 1631 701 80 6 0 0 1 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTG................................................................. 21 1 1 1619.00 1619 1617 1 0 1 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGCC............................................................... 23 2 1 1321.00 1321 1312 1 0 8 0 0 0 0 0 0
...............................................................................................................TTATTAGACCGAACACTCGTGCT............................................................... 23 2 1 1161.00 1161 1156 0 0 5 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGT.................................................................. 20 0 1 946.00 946 163 754 28 0 0 0 0 1 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGTT............................................................... 23 1 1 893.00 893 455 414 23 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCACACTCGTGCT............................................................... 23 1 1 832.00 832 65 766 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGAC............................................................... 23 2 1 781.00 781 780 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTGCT............................................................... 23 1 1 647.00 647 471 175 0 1 0 0 0 0 0 0
...............................................................................................................TAACTAGACCGAACACTCGTGCT............................................................... 23 1 1 634.00 634 562 71 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGCGCT............................................................... 23 1 1 612.00 612 187 423 2 0 0 0 0 0 0 0
...............................................................................................................TTATTAGACCGAACACTCGTGC................................................................ 22 2 1 596.00 596 596 0 0 0 0 0 0 0 0 0
...............................................................................................................TCACTAGACCGAACACTCGTGCT............................................................... 23 1 1 564.00 564 527 35 0 2 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTAC................................................................ 22 1 1 551.00 551 525 26 0 0 0 0 0 0 0 0
...............................................................................................................TGCCTAGACCGAACACTCGTGCT............................................................... 23 1 1 506.00 506 462 25 0 19 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGGGCT............................................................... 23 1 1 473.00 473 288 181 2 1 0 1 0 0 0 0
...............................................................................................................TGACTAGACCGAACCCTCGTGCT............................................................... 23 1 1 466.00 466 295 170 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGCCCGAACACTCGTGCT............................................................... 23 1 1 434.00 434 399 34 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGA................................................................ 22 1 1 425.00 425 321 94 10 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGT................................................................ 22 2 1 423.00 423 421 1 0 1 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGCTT.............................................................. 24 2 1 415.00 415 413 0 0 2 0 0 0 0 0 0
...............................................................................................................TGACTAGAACGAACACTCGTGCT............................................................... 23 1 1 407.00 407 158 248 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGAT............................................................... 23 1 1 400.00 400 302 96 0 2 0 0 0 0 0 0
................................................................................................................GACTAGACCGAACACTCGTGCT............................................................... 22 0 1 385.00 385 37 37 311 0 0 0 0 0 0 0
...............................................................................................................TAACTAGACCGAACACTCGTGC................................................................ 22 1 1 382.00 382 361 21 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACATTCGTGCT............................................................... 23 1 1 379.00 379 318 60 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGTGCT............................................................... 23 1 1 364.00 364 48 315 0 1 0 0 0 0 0 0
...............................................................................................................TGCCTAGACCGAACACTCGTGC................................................................ 22 1 1 360.00 360 345 13 0 2 0 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTGGTCGCT................................................................................................................. 22 0 1 347.00 347 263 68 16 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTGC................................................................ 22 1 1 337.00 337 291 45 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGGACACTCGTGCT............................................................... 23 1 1 333.00 333 30 303 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGCGC................................................................ 22 1 1 332.00 332 102 227 3 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCA............................................................... 23 1 1 324.00 324 221 81 21 1 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTG................................................................. 21 1 1 321.00 321 319 1 0 1 0 0 0 0 0 0
...............................................................................................................CGACTAGACCGAACACTCGTGCT............................................................... 23 1 1 320.00 320 208 109 2 1 0 0 0 0 0 0
...............................................................................................................TGACTATACCGAACACTCGTGCT............................................................... 23 1 1 305.00 305 255 47 2 1 0 0 0 0 0 0
...............................................................................................................TGACTGGACCGAACACTCGTGCT............................................................... 23 1 1 295.00 295 214 78 1 2 0 0 0 0 0 0
...............................................................................................................TCACTAGACCGAACACTCGTGC................................................................ 22 1 1 294.00 294 286 8 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCG............................................................... 23 1 1 287.00 287 198 82 1 6 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCTC.............................................................. 24 1 1 287.00 287 254 28 3 1 0 0 0 1 0 0
...............................................................................................................TGACTAGACCGTACACTCGTGCT............................................................... 23 1 1 280.00 280 2 278 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCTA.............................................................. 24 0 1 273.00 273 152 108 13 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACAATCGTGCT............................................................... 23 1 1 267.00 267 5 262 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCAAACACTCGTGCT............................................................... 23 1 1 266.00 266 192 72 0 2 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCACACTCGTGC................................................................ 22 1 1 260.00 260 24 236 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACCCTCGTGC................................................................ 22 1 1 254.00 254 186 68 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACTGAACACTCGTGCT............................................................... 23 1 1 243.00 243 152 89 1 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGGGC................................................................ 22 1 1 242.00 242 125 116 1 0 0 0 0 0 0 0
...............................................................................................................TTATTAGACCGAACACTCGTGCC............................................................... 23 3 1 242.00 242 239 0 0 3 0 0 0 0 0 0
................................................................................................................GACTAGACCGAACACTCGTGC................................................................ 21 0 1 239.00 239 20 15 204 0 0 0 0 0 0 0
..............................................................................................................CTGACTAGACCGAACACTCGTGCT............................................................... 24 1 1 233.00 233 166 58 9 0 0 0 0 0 0 0
...............................................................................................................TTACTAGCCCGAACACTCGTGCT............................................................... 23 2 1 228.00 228 220 4 0 4 0 0 0 0 0 0
...............................................................................................................TGACTAGCCCGAACACTCGTGC................................................................ 22 1 1 222.00 222 214 8 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAATACTCGTGCT............................................................... 23 1 1 218.00 218 93 124 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTTGTGCT............................................................... 23 1 1 217.00 217 116 97 2 2 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGACCACTCGTGCT............................................................... 23 2 1 210.00 210 208 2 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCTTGCT............................................................... 23 1 1 210.00 210 174 32 2 2 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCG................................................................... 19 0 1 206.00 206 154 45 6 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACATTCGTGC................................................................ 22 1 1 204.00 204 182 22 0 0 0 0 0 0 0 0
...............................................................................................................GGACTAGACCGAACACTCGTGCT............................................................... 23 1 1 203.00 203 148 55 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAACGAACACTCGTGC................................................................ 22 1 1 202.00 202 70 132 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGTGC................................................................ 22 1 1 194.00 194 32 161 1 0 0 0 0 0 0 0
...............................................................................................................TGGCTAGACCGAACACTCGTGCT............................................................... 23 1 1 194.00 194 73 119 2 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAGCACTCGTGCT............................................................... 23 1 1 193.00 193 50 141 1 0 0 0 1 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGAGCT............................................................... 23 1 1 191.00 191 113 78 0 0 0 0 0 0 0 0
...............................................................................................................TGACTATACCGAACACTCGTGC................................................................ 22 1 1 189.00 189 157 28 2 2 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTTCT............................................................... 23 1 1 188.00 188 115 72 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACCCGTGCT............................................................... 23 1 1 178.00 178 37 138 3 0 0 0 0 0 0 0
...............................................................................................................TGACTAGGCCGAACACTCGTGCT............................................................... 23 1 1 177.00 177 77 95 4 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGATCACTCGTGCT............................................................... 23 1 1 173.00 173 4 168 1 0 0 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTGGTCGC.................................................................................................................. 21 0 1 163.00 163 119 25 2 0 0 7 6 4 0 0
...............................................................................................................TGACTGGACCGAACACTCGTGC................................................................ 22 1 1 162.00 162 142 20 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTAGTGCT............................................................... 23 1 1 155.00 155 14 141 0 0 0 0 0 0 0 0
...............................................................................................................TAACTAGACCGAACACTCGTGCC............................................................... 23 2 1 155.00 155 155 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTAC................................................................ 22 2 1 154.00 154 152 1 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCAAACACTCGTGC................................................................ 22 1 1 147.00 147 112 35 0 0 0 0 0 0 0 0
...............................................................................................................CGACTAGACCGAACACTCGTGC................................................................ 22 1 1 146.00 146 100 44 2 0 0 0 0 0 0 0
...............................................................................................................GGACTAGACCGAACACTCGTGC................................................................ 22 1 1 145.00 145 121 23 1 0 0 0 0 0 0 0
...............................................................................................................TGCCTAGACCGAACACTCGTGCC............................................................... 23 2 1 141.00 141 135 0 0 6 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCATGCT............................................................... 23 1 1 137.00 137 63 72 1 0 1 0 0 0 0 0
..............................................................................................................CTGACTAGACCGAACACTCGTGC................................................................ 23 1 1 136.00 136 97 36 3 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACTGAACACTCGTGC................................................................ 22 1 1 135.00 135 93 42 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCCAACACTCGTGCT............................................................... 23 1 1 133.00 133 30 103 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTACT............................................................... 23 1 1 131.00 131 67 63 0 1 0 0 0 0 0 0
...............................................................................................................TGAATAGACCGAACACTCGTGCT............................................................... 23 1 1 129.00 129 4 125 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGTT............................................................... 23 2 1 128.00 128 127 1 0 0 0 0 0 0 0 0
...............................................................................................................AGACTAGACCGAACACTCGTGCT............................................................... 23 1 1 127.00 127 94 31 0 1 0 1 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCTTGC................................................................ 22 1 1 127.00 127 116 8 3 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGGACACTCGTGC................................................................ 22 1 1 125.00 125 20 105 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGTC............................................................... 23 2 1 124.00 124 109 14 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTTGTGC................................................................ 22 1 1 123.00 123 87 35 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACGCTCGTGCT............................................................... 23 1 1 123.00 123 39 83 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGATCGAACACTCGTGCT............................................................... 23 1 1 122.00 122 27 95 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACAGAACACTCGTGCT............................................................... 23 1 1 122.00 122 8 114 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTGCC............................................................... 23 2 1 120.00 120 118 1 0 1 0 0 0 0 0 0
...............................................................................................................GTACTAGACCGAACACTCGTGCT............................................................... 23 2 1 120.00 120 119 0 0 1 0 0 0 0 0 0
...............................................................................................................CTACTAGACCGAACACTCGTGCT............................................................... 23 2 1 119.00 119 114 4 0 1 0 0 0 0 0 0
...............................................................................................................TGACCAGACCGAACACTCGTGCT............................................................... 23 1 1 115.00 115 58 56 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCCA.............................................................. 24 1 1 115.00 115 57 51 7 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGACCACTCGTGC................................................................ 22 2 1 115.00 115 115 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTATACCGAACACTCGTGCT............................................................... 23 2 1 114.00 114 112 1 0 1 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGA................................................................ 22 2 1 113.00 113 113 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGAT............................................................... 23 2 1 110.00 110 109 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACAATCGTGC................................................................ 22 1 1 110.00 110 6 104 0 0 0 0 0 0 0 0
...............................................................................................................TGGCTAGACCGAACACTCGTGC................................................................ 22 1 1 106.00 106 59 45 2 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGTACACTCGTGC................................................................ 22 1 1 106.00 106 1 105 0 0 0 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTGGTCGCC................................................................................................................. 22 1 1 106.00 106 105 1 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGCCCGAACACTCGTGC................................................................ 22 2 1 105.00 105 105 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACCCTCGTGCT............................................................... 23 2 1 104.00 104 102 1 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAAAACTCGTGCT............................................................... 23 1 1 101.00 101 9 91 1 0 0 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTTGTCGCT................................................................................................................. 22 1 1 100.00 100 0 100 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACTGAACACTCGTGCT............................................................... 23 2 1 100.00 100 100 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGCCCGAACACTCGTGCC............................................................... 23 2 1 98.00 98 98 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAGCACTCGTGC................................................................ 22 1 1 96.00 96 33 57 6 0 0 0 0 0 0 0
...............................................................................................................TCACTAGACCGAACACTCGTGCC............................................................... 23 2 1 96.00 96 95 1 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGAC............................................................... 23 3 2 94.00 188 187 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGGCCGAACACTCGTGC................................................................ 22 1 1 94.00 94 46 47 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTCCT............................................................... 23 1 1 94.00 94 45 47 2 0 0 0 0 0 0 0
................................................................................................................GACTAGACCGAACACTCGTG................................................................. 20 0 1 93.00 93 2 3 88 0 0 0 0 0 0 0
...............................................................................................................TTCCTAGACCGAACACTCGTGCT............................................................... 23 2 1 93.00 93 88 1 0 4 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTTC................................................................ 22 1 1 93.00 93 74 19 0 0 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGT................................................................ 22 2 1 92.00 92 87 5 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAATACTCGTGC................................................................ 22 1 1 89.00 89 44 45 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCTTGCT............................................................... 23 2 1 86.00 86 85 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACATTCGTGCC............................................................... 23 2 1 84.00 84 83 0 0 1 0 0 0 0 0 0
...............................................................................................................AGACTAGACCGAACACTCGTGC................................................................ 22 1 1 83.00 83 62 20 1 0 0 0 0 0 0 0
...............................................................................................................ATACTAGACCGAACACTCGTGCT............................................................... 23 2 1 80.00 80 76 4 0 0 0 0 0 0 0 0
...............................................................................................................TTCCTAGACCGAACACTCGTGC................................................................ 22 2 1 78.00 78 77 0 0 1 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGCTT.............................................................. 24 2 1 78.00 78 77 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGAGC................................................................ 22 1 1 77.00 77 39 38 0 0 0 0 0 0 0 0
...............................................................................................................TTATTAGACCGAACACTCGTG................................................................. 21 2 1 77.00 77 77 0 0 0 0 0 0 0 0 0
...............................................................................................................CTACTAGACCGAACACTCGTGC................................................................ 22 2 1 77.00 77 77 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAAACCGAACACTCGTGCT............................................................... 23 1 1 74.00 74 39 34 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACAGAACACTCGTGC................................................................ 22 1 1 73.00 73 13 60 0 0 0 0 0 0 0 0
...............................................................................................................TGACTTGACCGAACACTCGTGCT............................................................... 23 1 1 73.00 73 58 15 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACATTCGTGCT............................................................... 23 2 1 72.00 72 72 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGGGCT............................................................... 23 2 1 72.00 72 72 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCACACTCGTGT................................................................ 22 2 1 72.00 72 0 72 0 0 0 0 0 0 0 0
...............................................................................................................GTACTAGACCGAACACTCGTGC................................................................ 22 2 1 71.00 71 71 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACCCTCGTGC................................................................ 22 2 1 70.00 70 70 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGCA............................................................... 23 2 1 70.00 70 70 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACCCTCGTGCC............................................................... 23 2 1 69.00 69 65 4 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACGCTCGTGC................................................................ 22 1 1 68.00 68 24 42 2 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCATGC................................................................ 22 1 1 67.00 67 37 28 2 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACTCTCGTGCT............................................................... 23 1 1 67.00 67 4 63 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGCG............................................................... 23 2 1 67.00 67 66 1 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACATTCGTGC................................................................ 22 2 1 63.00 63 63 0 0 0 0 0 0 0 0 0
..............................................................GTCGATTGTCGGTTTGGTCGCT................................................................................................................. 22 1 1 62.00 62 62 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTGGACCGAACACTCGTGCC............................................................... 23 2 1 62.00 62 62 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACCCGTGC................................................................ 22 1 1 62.00 62 24 36 2 0 0 0 0 0 0 0
...............................................................................................................TGACTATACCGAACACTCGTGCC............................................................... 23 2 1 61.00 61 60 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGGGCC............................................................... 23 2 1 61.00 61 61 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTATACCGAACACTCGTGC................................................................ 22 2 1 60.00 60 60 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCAAACACTCGTGCT............................................................... 23 2 1 59.00 59 59 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCACACTCGTG................................................................. 21 1 1 58.00 58 8 50 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACACGTGCT............................................................... 23 1 1 58.00 58 13 45 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGCGCC............................................................... 23 2 1 58.00 58 53 5 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGCTC.............................................................. 24 2 1 57.00 57 57 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCCTGCT............................................................... 23 1 1 56.00 56 14 42 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGCCCGAACACTCGTGCC............................................................... 23 3 1 56.00 56 56 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGT.................................................................. 20 1 1 56.00 56 54 1 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTCC................................................................ 22 1 1 55.00 55 35 20 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACTGAACACTCGTGC................................................................ 22 2 1 55.00 55 55 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGATCGAACACTCGTGC................................................................ 22 1 1 54.00 54 16 38 0 0 0 0 0 0 0 0
...............................................................................................................TGACGAGACCGAACACTCGTGCT............................................................... 23 1 1 53.00 53 14 39 0 0 0 0 0 0 0 0
...............................................................................................................TGACTCGACCGAACACTCGTGCT............................................................... 23 1 1 53.00 53 3 49 0 1 0 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTTGTCGC.................................................................................................................. 21 1 1 51.00 51 0 51 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCG................................................................... 19 1 1 50.00 50 50 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGGT............................................................... 23 1 1 49.00 49 16 33 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCAAACACTCGTGCC............................................................... 23 2 1 49.00 49 46 2 0 1 0 0 0 0 0 0
...............................................................................................................ATACTAGACCGAACACTCGTGC................................................................ 22 2 1 47.00 47 47 0 0 0 0 0 0 0 0 0
...............................................................................................................TGAATAGACCGAACACTCGTGC................................................................ 22 1 1 47.00 47 2 45 0 0 0 0 0 0 0 0
..............................................................................................................CTGACTAGACCGAACACTCGTGCC............................................................... 24 2 1 47.00 47 46 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGGGCT............................................................... 23 2 1 47.00 47 0 47 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAACGAACAATCGTGCT............................................................... 23 2 1 46.00 46 0 46 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGG................................................................ 22 1 1 45.00 45 8 35 2 0 0 0 0 0 0 0
...............................................................................................................TGACTTGACCGAACACTCGTGC................................................................ 22 1 1 45.00 45 38 7 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTAGTGC................................................................ 22 1 1 44.00 44 6 38 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCCAACACTCGTGC................................................................ 22 1 1 44.00 44 18 26 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGACCACTCGTGCC............................................................... 23 3 1 44.00 44 44 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGCGCT............................................................... 23 2 1 44.00 44 42 2 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAACGAACACTCGTG................................................................. 21 1 1 44.00 44 4 40 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGTGAT............................................................... 23 2 1 44.00 44 30 14 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAAAACTCGTGC................................................................ 22 1 1 42.00 42 5 37 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAGCGAACACTCGTGCT............................................................... 23 1 1 42.00 42 15 27 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCTTGCC............................................................... 23 2 1 42.00 42 41 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTC................................................................. 21 1 1 42.00 42 36 6 0 0 0 0 0 0 0 0
...............................................................................................................TGTCTAGACCGAACACTCGTGCT............................................................... 23 1 1 42.00 42 15 27 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTTGTGCT............................................................... 23 2 1 42.00 42 41 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGTCCGAACACTCGTGCT............................................................... 23 1 1 41.00 41 12 29 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACTGAACACTCGTGCC............................................................... 23 2 1 40.00 40 38 2 0 0 0 0 0 0 0 0
...............................................................................................................TGATTATACCGAACACTCGTGCT............................................................... 23 2 1 40.00 40 39 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCTAACACTCGTGCT............................................................... 23 1 1 40.00 40 9 31 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTG................................................................. 21 1 1 39.00 39 28 11 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTGAT............................................................... 23 2 1 39.00 39 37 0 0 2 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCCCTCGTGCT............................................................... 23 2 1 39.00 39 26 13 0 0 0 0 0 0 0 0
...............................................................................................................TGACCAGACCGAACACTCGTGC................................................................ 22 1 1 38.00 38 25 13 0 0 0 0 0 0 0 0
.................................................................................................................ACTAGACCGAACACTCGTGCT............................................................... 21 0 1 38.00 38 17 12 9 0 0 0 0 0 0 0
...............................................................................................................TGCTTAGACCGAACACTCGTGCT............................................................... 23 2 1 38.00 38 37 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTACACCGAACACTCGTGCT............................................................... 23 1 1 38.00 38 15 23 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGCCCGAACACTCGTGAT............................................................... 23 2 1 37.00 37 36 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACAAGACCGAACACTCGTGCT............................................................... 23 1 1 37.00 37 24 12 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCACACTCGCGCT............................................................... 23 2 1 37.00 37 1 36 0 0 0 0 0 0 0 0
...............................................................................................................GGACTAGACCGAACACTCGTGCC............................................................... 23 2 1 37.00 37 35 2 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGATCACTCGTGC................................................................ 22 1 1 37.00 37 0 36 1 0 0 0 0 0 0 0
...............................................................................................................TTACTAGAACGAACACTCGTGCT............................................................... 23 2 1 36.00 36 31 5 0 0 0 0 0 0 0 0
...............................................................................................................TAACTAGACCGAACACTCGTG................................................................. 21 1 1 35.00 35 25 10 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGAGCC............................................................... 23 2 1 35.00 35 33 2 0 0 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCTTGCT............................................................... 23 2 1 35.00 35 35 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGTTT.............................................................. 24 2 1 35.00 35 25 10 0 0 0 0 0 0 0 0
..............................................................GTCGATTGTCGGTTTGGTCGC.................................................................................................................. 21 1 1 34.00 34 34 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGGG................................................................. 21 1 1 34.00 34 17 16 1 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTTCC............................................................... 23 2 1 34.00 34 33 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCCTGC................................................................ 22 1 1 34.00 34 4 30 0 0 0 0 0 0 0 0
....................................................................................TTTTACCAGGGTTCCGATCAAGCGAAG...................................................................................... 27 0 1 34.00 34 30 4 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGGGC................................................................ 22 2 1 33.00 33 33 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTTCT............................................................... 23 2 1 33.00 33 32 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGTG................................................................. 21 1 1 33.00 33 4 29 0 0 0 0 0 0 0 0
...............................................................................................................TGATTAGCCCGAACACTCGTGCT............................................................... 23 2 1 33.00 33 33 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCTTGC................................................................ 22 2 1 33.00 33 32 1 0 0 0 0 0 0 0 0
...............................................................................................................TTACTATACCGAACACTCGTGCC............................................................... 23 3 1 32.00 32 32 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGTC............................................................... 23 3 1 32.00 32 32 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGCCCGAACACGCGTGCT............................................................... 23 2 1 32.00 32 30 1 0 1 0 0 0 0 0 0
...............................................................................................................TGATTATACCGAACACTCGTGC................................................................ 22 2 1 32.00 32 32 0 0 0 0 0 0 0 0 0
...............................................................................................................TGAGTAGACCGAACACTCGTGCT............................................................... 23 1 1 32.00 32 7 25 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCACACGCGTGCT............................................................... 23 2 1 31.00 31 0 31 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGCG................................................................. 21 1 1 31.00 31 11 20 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAAGACTCGTGCT............................................................... 23 1 1 31.00 31 9 22 0 0 0 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTGGTCG................................................................................................................... 20 0 1 31.00 31 9 12 3 0 0 1 0 5 0 1
...............................................................................................................GTACTAGACCGAACACTCGTGCC............................................................... 23 3 1 31.00 31 30 0 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAAACCGAACACTCGTGC................................................................ 22 1 1 30.00 30 20 9 0 1 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTTGTGCC............................................................... 23 2 1 30.00 30 29 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGTGA................................................................ 22 2 1 30.00 30 22 8 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGCTTT............................................................. 25 1 1 29.00 29 20 7 2 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGC.................................................................. 20 1 1 29.00 29 26 3 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTA................................................................. 21 1 1 29.00 29 20 9 0 0 0 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTTGTCG................................................................................................................... 20 1 1 28.00 28 0 28 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGGGC................................................................ 22 2 1 28.00 28 0 28 0 0 0 0 0 0 0 0
...............................................................................................................TGCCTAGACCGAACACTCGTG................................................................. 21 1 1 28.00 28 26 2 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACCCTCGTG................................................................. 21 1 1 27.00 27 8 19 0 0 0 0 0 0 0 0
...............................................................................................................TGACTATACCGAACACTCGTG................................................................. 21 1 1 27.00 27 24 2 1 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTTGTGC................................................................ 22 2 1 27.00 27 27 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGTTCACTCGTGCT............................................................... 23 2 1 27.00 27 0 27 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGAGCT............................................................... 23 2 1 27.00 27 27 0 0 0 0 0 0 0 0 0
..............................................................................................................CGGACTAGACCGAACACTCGTGC................................................................ 23 2 1 27.00 27 27 0 0 0 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGCG............................................................... 23 2 1 27.00 27 27 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACACGTGC................................................................ 22 1 1 27.00 27 6 21 0 0 0 0 0 0 0 0
...............................................................................................................CGACTAGACCGAACACTCGTGCC............................................................... 23 2 2 26.50 53 53 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGGACAATCGTGCT............................................................... 23 2 1 26.00 26 0 26 0 0 0 0 0 0 0 0
...............................................................................................................TTCCTAGACCGAACACTCGTGCC............................................................... 23 3 1 26.00 26 26 0 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTGCTA.............................................................. 24 1 1 26.00 26 26 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACAATCGTG................................................................. 21 1 1 26.00 26 0 26 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTTCT............................................................... 23 2 1 26.00 26 23 3 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAATACTCGTGCC............................................................... 23 2 1 26.00 26 26 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACTCTCGTGC................................................................ 22 1 1 26.00 26 3 23 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTGA................................................................ 22 2 1 25.00 25 24 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTGGTGCT............................................................... 23 1 1 25.00 25 16 9 0 0 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGAC............................................................... 23 3 1 25.00 25 25 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCACCCTCGTGCT............................................................... 23 2 1 25.00 25 3 22 0 0 0 0 0 0 0 0
...............................................................................................................AGACTAGACCGAACACTCGTGCC............................................................... 23 2 1 25.00 25 22 3 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCAAACACTCGTGC................................................................ 22 2 1 24.00 24 24 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGTACACTCGTG................................................................. 21 1 1 24.00 24 0 24 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGAACGAACACTCGTGC................................................................ 22 2 1 24.00 24 23 1 0 0 0 0 0 0 0 0
...............................................................................................................TGACGAGACCGAACACTCGTGC................................................................ 22 1 1 24.00 24 9 15 0 0 0 0 0 0 0 0
...............................................................................................................TTACTGGACCGAACACTCGTGCT............................................................... 23 2 1 23.00 23 23 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGGACACGCGGGCT............................................................... 23 3 1 23.00 23 0 23 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAACGAACACTCGTGT................................................................ 22 2 1 23.00 23 4 19 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGTACACTCGGGCT............................................................... 23 2 1 23.00 23 0 23 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGCTCT............................................................... 23 2 1 22.00 22 2 20 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGCCCGAACACGCGTGC................................................................ 22 2 1 22.00 22 22 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGCTCACTCGTGCT............................................................... 23 2 1 22.00 22 0 22 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGACCACTCGTGT................................................................ 22 2 1 22.00 22 11 11 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAATACTCGTGCT............................................................... 23 2 1 22.00 22 22 0 0 0 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTGTT............................................................... 23 2 1 22.00 22 22 0 0 0 0 0 0 0 0 0
...............................................................................................................TGATTAGACCGAACACTCGTAC................................................................ 22 2 1 21.00 21 21 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAACCAACACTCGTGCT............................................................... 23 2 1 21.00 21 0 21 0 0 0 0 0 0 0 0
.................................................................................................................ACTAGACCGAACACTCGTGC................................................................ 20 0 1 21.00 21 2 10 9 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAGCGAACACTCGTGC................................................................ 22 1 1 21.00 21 6 15 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCTTGCC............................................................... 23 3 1 21.00 21 21 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGAACGATCACTCGTGCT............................................................... 23 2 1 21.00 21 0 21 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACGCGTGCC............................................................... 23 2 1 21.00 21 15 6 0 0 0 0 0 0 0 0
...............................................................................................................TTACTAGACCGAACACTCGTTC................................................................ 22 2 1 21.00 21 20 1 0 0 0 0 0 0 0 0
...............................................................................................................TTATTAGCCCGAACACTCGTGCT............................................................... 23 3 1 21.00 21 21 0 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTAGTG................................................................. 21 1 1 20.00 20 1 19 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACAATCGTGT................................................................ 22 2 1 20.00 20 0 20 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGAACACTCGTGTA............................................................... 23 2 1 20.00 20 10 10 0 0 0 0 0 0 0 0
...................................................................................................................TAGACCGAACACTCGTGC................................................................ 18 0 1 20.00 20 1 17 2 0 0 0 0 0 0 0
...............................................................................................................TGACTAGGCCGAACACTCGTG................................................................. 21 1 1 20.00 20 3 17 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGGACACTCGTG................................................................. 21 1 1 20.00 20 2 18 0 0 0 0 0 0 0 0
...............................................................................................................TGACTAGACCGGACACGCGTGCT............................................................... 23 2 1 20.00 20 0 20 0 0 0 0 0 0 0 0
...............................................................................................................TGACTGGACCGAACACTCGTG................................................................. 21 1 1 20.00 20 12 7 1 0 0 0 0 0 0 0

Anti-sense strand reads

CATGTTCTTACCGCTATTTCACACACACAGCGTCTTTTTCTTCTGTTTAAAATTTTAATTTACCGCTAACAGCCAAACCAGCGAAAAATGGTCCCAAGGCTAGTTCGCTTCACTGATCTGGCTTGTGAGCACGATATTAAAATCTTACAAGTTGTACCGGTTGGTCACTGCTTTCACTGTTTTCACTTTTTTCACTG

************************************************((((((((((((....((((.((((((((((((((((((......((...))........))))))))))))))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body
....................................................................................AAAATGTTCCGGAGGCTAGTT............................................................................................ 21 3 2 0.50 1 1
.............................................................................................................TCACTGATTTGACTAGTGAG.................................................................... 20 3 2 0.50 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 3:12677539-12677735 - dps-mir-286 Known_mirbase GTACAAGAA---TGGCGA---T-----------------A-A--------AG--------T--------------G-------TGTGTGTCG-C--AGAAAAA-GAAGACAAA--------------------------------TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC---A---G---------GGTT----CCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCC-AACCAGTGACGA-------AAGTG-AC-------------AAAAGTGAAAAAAG------TGAC
droPer2 scaffold_2:8905931-8906127 + dpe-mir-286 Known_mirbase GTACAAGAA---TGGCGA---T-----------------A-A--------AG--------T--------------G-------TGTGTGTCG-C--AGAAAAA-GAAGACAAA--------------------------------TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC---A---G---------GGTT----CCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCC-AACCAGTGACGG-------AAGTG-AC-------------AAAAGTGAAAAAAG------TGAC
droWil2 scf2_1100000004514:1651710-1651914 - dwi-mir-286 Known_mirbase CAAAAAGTT---AGCCAA---C-----------------C-A-AAC----TT--------A--------------G-------TGAGTGACTA---TGCAATT-GAA-ATTAC--------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA---A---AAATCTTGTTTGTTTTTGCCAATCTAA------TAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAACA------------AC---CAACAA-GC---------------TAGTGAG-----AAGAAT--TA
droVir3 scaffold_12875:4112054-4112275 + dvi-mir-286 Known_mirbase GCTCAGATA---TT-------------------------C-C--------AG--------T------GTTTCAGTG--T---GACAGTGTTC-C--AGTAT-------TCCAGTGTTTCAATTCCAATATTCCAG--------TATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA---A---CAA-------TATA----CCA-TTAT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATAT-AAAAAG---CAC-------AAGTT-CT-------------CGATTTGATAACCG------TCGC
droMoj3 scaffold_6496:20936729-20936977 - dmo-mir-286 Known_mirbase ACAAAGG----------------------------------A------GGAGTGTTTCAGTTCCAGTGTTTCACTA-------TCAGTGTTT-C--ACT---------TTCAGTGTTTCATTTCCAGTGTTCGAAAATTATAAAATTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA---C---ATA-------TA--------CACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTC-A------------ATTATAAAATT-TCTAGTGCATGGTTCAAACTTAAA-----AAGAAA--AC
droGri2 scaffold_15112:2108777-2108993 - dgr-mir-286-1 Known_mirbase GAATATAA--AATGGTGA-----------------------A--------TT--------TTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTG-C--AGTCAAACCCAG-CCAG------------------------------TATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAAC-CTAA-AC---TCT---ATAT----ACAAT--------ATATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGC-A------------TC---AGTTTT-GG----------TT---AAATGAA--AAA------TGAT
droAna3 scaffold_13266:9731315-9731500 + dan-mir-286 Known_mirbase AGAATCA---AT------TCAT-----------------CAA--------AT--------T--------------G-------TAAGTGATTTT-TAGCAT-------CAGAA--------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCAC-AAAA-AA---ATT---GGTT----ACCAACAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTA-A-----------AGT---G-ACTT-GG---------------AAATGTA--AAG------TTTC
droBip1 scf7180000396427:874297-874470 + AGAA---TCCAG------TCAT-----------------C-A--------AA--------T--------------G-------TAAGTGGTTAT-TAGCAT-------CAGAA--------------------------------TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCAC--AAAAG---------GGTT----TCCATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTA-A-----------AGT---G---TT-TC---------------AAATAGT--------------G
droKik1 scf7180000302679:89354-89541 - CTCCAACAG------CA---GCACCAAGAAAGTAAAGTTC-CAAAAGTGAAA--------A--------------G-------AAACAGCTAAT-T------------ACCAG--------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA---A---CCA-------GGTT----CCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTA-G------------GG---GA---T-AA----------------AG---------------T-GC
droFic1 scf7180000454039:848011-848189 - CTTCAAACA---AACCAATAAT-----------------C-C------------------A--------------A-------CAAGTGAACTTAAGGCTC-------ATCAG--------------------------------TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA---A---C---------ATTT----CCTTTCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAA-G------------GT---GAAGTT-AC---------------CAGTGAA-----A-------AA
droEle1 scf7180000491201:2013963-2014141 - ATACAAAGC------CA---ATA----------------C-A--------AA--------A--------------G-------TAAGTGATAAT-CGGTGC-------TCCAG------------------------------T-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA---A---T---------GGTT----TCGACCAAG---------CGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCA-A------------GT---GATGTTTTT---------------TAGTGAA-----A-GA----GG
droRho1 scf7180000780066:73616-73795 + ATATAAATA------CA---ATA----------------C-A--------AA--------A--------------G-------TAAGTGATAAT-TGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT---A---C---------GGTT----CCGACCAAG---------CTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCT-A------------GT---GAAATT-AT---------------TAGTGAA-----AAGAAG--AC
droBia1 scf7180000302143:3059798-3059968 - AAACTGAAA-AA--T---ACGTG----------------C-C--------AA--------A--------------G-------TAAGTGAGAA--GGGC-C-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---C---------GGTG----ACGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGA-A------------GT---GAAGTT-AA---------------AGGTG-----------------
droTak1 scf7180000415384:83999-84169 + AACCAAAGA-AA------TAATC----------------T-C--------AA--------A--------------G-------TAAGTGATACC-AGGCTC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---C---------GATT----ACCATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTT-A------------GT---GAAGTT-AA----------------AG-----------------TT
droEug1 scf7180000409474:2396819-2396985 + CTTTAAAC-------------T-----------------G-A--------AA--------A--------------G-------TAAGTGATAAT-TGGCAA-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA---A---CGA---------------------------------CTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTA-A------------GT---GAAAGT-TA-------------AAAAGCAAAAATAA------AGAT
dm3 chr2R:15548894-15549068 - dme-mir-286 Known_mirbase AAATCAAA----------AAAT-----------------C-A--------AG--------A--------------G-------TAAGTGATATT-GGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---AGAAA---------GGTT----TCGATTAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---AAAGTT-GC---------------GAGTGAA-----A--------A
droSim2 2r:16196166-16196338 - dsi-mir-286 Known_mirbase ATCCAAAA------------AG-----------------C-A--------AG--------A--------------G-------TAAGTGATATT-GGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAA--AGAAA---------GGTT----TCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---GAAGTT-GC---------------AAGTGAA-----A---------
droSec2 scaffold_1:13063624-13063800 - dse-mir-286 Known_mirbase CAACAATCA-AA------AAAT-----------------C-A--------AG--------A--------------G-------TAAGTTATATT-GGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA---ATAAA---------GGTT----TCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---GAAGTT-GC---------------AAGTGAA-----A---------
droYak3 2R:13623708-13623900 + dya-mir-286 Known_mirbase CTACAAATC---AAC-AGTAAT-----------------G-CAAAAGAGAAG--------A--------------G-------TAAGTGTTA-T-AGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---AGA-------GGTT----TCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---GAAGTT-GC---------------AAGTGAA-----ATTAAT--CA
droEre2 scaffold_4845:9749143-9749325 - der-mir-286 Known_mirbase CTACAAATC---AACAACAAAT-----------------G-C--------AG--------A--------------G-------TAAGTGTTA-T-AGGCAC-------TGCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---GAA-------GGTT----TCGATCGAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCAC-A--CT--------GT---GAAGTT-GC---------------GAGTGAA-----A-------AC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTACAAGAA---TGGCGA---T-----------------A-A--------AG--------T--------------G-------TGTGTGTCG-C--AGAAAAA-GAAGACAAA--------------------------------TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC---A---G---------GGTT----CCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCC-AACCAGTGACGA-------AAGTG-AC-------------AAAAGTGAAAAAAG------TGACSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................231197384.00197384133833115522589773971221015
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22199256.009925622251671405629785011218
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................23129723.00297230172935012922700000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................21113749.00137490106060060667701050
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................2214474.00447408615280285900001
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2412419.0024190801631670100010
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201946.00946028163075401000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................231781.00781007801000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................221425.0042501032109400000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221385.0038503113703700000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT.........................................................................................................................................................................221347.0034701626306800000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................231324.0032402122118100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................231287.002870119868200000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................241287.002870325412801000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................241273.00273013152010800000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................211239.0023902042001500000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................191206.002060615414500000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCGC..........................................................................................................................................................................211163.001637211902504060
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................231124.001240110901400000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC.........................................................................................................................................................................221106.00106001050100000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG.............................................................................................20193.009308820300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG............................................................................................22145.004502803500000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC.............................................................................................21142.004200360600000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21138.0038091701200000
.....................................................................................................................................................................................TTTTACC---A---G---------GGTT----CCGATCAAG---------CGAAG..................................................................................................................27134.003400300400000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCG...........................................................................................................................................................................20131.003113901215000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC..............................................................................................20129.002900260300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA.............................................................................................21129.002900200900000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC............................................................................................20121.002109201000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA...........................................................................................23120.0020001001000000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC............................................................................................18120.002002101700000
droPer2
GTACAAGAA---TGGCGA---T-----------------A-A--------AG--------T--------------G-------TGTGTGTCG-C--AGAAAAA-GAAGACAAA--------------------------------TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC---A---G---------GGTT----CCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCC-AACCAGTGACGG-------AAGTG-AC-------------AAAAGTGAAAAAAG------TGACSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................231112653.0011265392737218192824220192
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22137199.0037199307858362931316
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................2317731.0077317692038010
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2116311.00631149963412270486
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................2313635.0036353609024020
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG............................................................................................2212076.002076206907000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................2211969.00196913842583000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................241665.006655104143080
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................191653.0065364417010
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201533.005333821146031
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................221378.00378363213000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCGC..........................................................................................................................................................................211160.00160134040022
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT.........................................................................................................................................................................221109.0010998011000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................22194.009461248010
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................23187.00878601000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................24186.008669017000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................23182.008254025030
............................................................................................................................................................................................................................................TGACTAGACCGAACACTC................................................................................................18165.00656500000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................24146.00464204000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG..............................................................................................20141.00414100000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCG...........................................................................................................................................................................20135.00353003002
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21133.00332229000
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20124.00242301000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................21123.00231364000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................24119.00191306000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................19113.0013508000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA...........................................................................................23112.00121200000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC.........................................................................................................................................................................22110.00101000000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC............................................................................................1819.009009000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC............................................................................................2018.008602000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG.............................................................................................2018.008431000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA.............................................................................................2118.008602000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA...........................................................................................2317.007403000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCG..........................................................................................2416.006600000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC..............................................................................................2016.006600000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC...........................................................................................2215.005500000
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC............................................................................................1915.005302000
.................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT...........................................................................................1814.004301000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCT...............................................................................................1914.004400000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC.............................................................................................2114.004103000
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG.............................................................................................2313.003012000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGG...........................................................................................2313.003300000
...............................................................................................................................................................GGCGATTGTCGGTTTGGTC............................................................................................................................................................................1913.003200001
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG...........................................................................................2213.003300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC..........................................................................................2413.003300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................2413.003300000
droWil2
CAAAAAGTT---AGCCAA---C-----------------C-A-AAC----TT--------A--------------G-------TGAGTGACTA---TGCAATT-GAA-ATTAC--------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA---A---AAATCTTGTTTGTTTTTGCCAATCTAA------TAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAACA------------AC---CAACAA-GC---------------TAGTGAG-----AAGAAT--TASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................231463839.00463839674107864596932388
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22146657.0046657142175046072268
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................2215681.0056818100564617
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2415244.0052444211520414
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2115172.00517221320510118
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................2411257.001257016012392
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................231683.0068376106006
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201590.005901015799
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................231568.005680705592
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221367.0036719202731
...............................................................................................................................................................GGCGATTGTCGGTATAGTCTCT.........................................................................................................................................................................221292.002920002911
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA...........................................................................................231143.001430001430
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................231114.001142200920
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................241100.00100110980
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................22196.0096110940
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT............................................................................................22192.0092000920
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT..............................................................................................22187.0087000870
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21172.0072030690
...............................................................................................................................................................GGCGATTGTCGGTATAGTCTC..........................................................................................................................................................................21172.0072000720
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG.............................................................................................23153.0053010520
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................25152.0052000520
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................21137.00370140230
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................24137.0037010360
.................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT...........................................................................................18128.0028000271
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT..........................................................................................24126.0026010250
............................................................................................................................................................AATGGCGATTGTCGGTATAGTC............................................................................................................................................................................22124.0024000240
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................19123.0023000221
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................19122.0022410170
.................................................................................................................................................................CGATTGTCGGTATAGTCTCTTT.......................................................................................................................................................................22120.0020000200
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20119.0019000190
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................23118.0018000180
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG............................................................................................22117.0017100070
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTA..........................................................................................23117.0017030140
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT..........................................................................................23115.0015030120
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC.............................................................................................21114.0014000140
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCTGC.............................................................................................21113.0013000130
............................................................................................................................................................AATGGCGATTGTCGGTATAGT.............................................................................................................................................................................21111.0011000110
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................24111.0011000110
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC............................................................................................20110.001001090
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT.............................................................................................21110.0010000100
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC............................................................................................1919.00901080
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTAT............................................................................................2218.00800080
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG...........................................................................................2318.00800080
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT............................................................................................2218.00800080
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCG...............................................................................................2117.00700070
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCGT..........................................................................................2416.00600060
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT............................................................................................2216.00600060
............................................................................................................................................................................................................................................TGACTAGACCGAACACTC................................................................................................1815.00503020
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC............................................................................................1815.00501040
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGT............................................................................................2115.00502030
...........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT...........................................................................................2415.00502030
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG.............................................................................................2014.00402020
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTAT..........................................................................................2414.00400040
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC..........................................................................................2414.00420020
...........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTG.............................................................................................2214.00401030
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTGA............................................................................................2414.00400040
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTT.............................................................................................2314.00400040
...............................................................................................................................................................GGCGATTGTCGGTATAGTCTCTT........................................................................................................................................................................2314.00400040
.........................................................................................................................................................................................................................................AAGTGACTAGACCGAACACTCGT..............................................................................................2314.00400040
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT............................................................................................2214.00400040
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA.............................................................................................2113.00300030
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA...........................................................................................2313.00300030
droVir3
GCTCAGATA---TT-------------------------C-C--------AG--------T------GTTTCAGTG--T---GACAGTGTTC-C--AGTAT-------TCCAGTGTTTCAATTCCAATATTCCAG--------TATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA---A---CAA-------TATA----CCA-TTAT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATAT-AAAAAG---CAC-------AAGTT-CT-------------CGATTTGATAACCG------TCGCSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................2312436012.00243601271716461968720113010036335842141414210542562106931859116038191995114939761017122119616719622587918222315371629890114230826462312211078624908047251036028924173063299209540014372398629064112856946104861788420453227931018411169
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22144003.0044003821106656200000000291001000300010000031601927674200524154305922253161255121084079211638541863125013859859203038146600000156176742101366911669614593334379
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................23116543.001654370226013539000000000000000000000000000000104200001526115424918216127315224310749767200014966000002010296300000921933712
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................19115114.00151148802100000000000000000000000000000000310037741456115514601137993208996718768185196005514501218100000710350011012118201610
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................23110567.0010567546501370000000001000000000000000000000010003545904655102284053810405631125703416623503420119647100001435000001971322
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................2217294.0072943307400000000001000000000000000001007812120145833623253742336563540677831123223017820059149800000252313014100310114512076106
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2416460.00646041116800000000012000100010000000000190297813254100092322133002432384542434072401631751591004154871200020281203022009467693336
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................2415195.005195020107500000000000000000010000012001003150003262732244013071643192684752621611791441005631830200013142740002116273357
...............................................................................................................................................................GGCGATTGTCGGTATGGTCGCT.........................................................................................................................................................................2212134.00213400085000000001700000000000000000060641232585990000201601021142712011100014400000404516200203011853587578
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................2411732.00173201118900000000000001010000000010002502267118100000071038910990721285510048302821000316200000148600422103535391419
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2111460.00146010140294000000000100010020000000442122410148010063942475747575079403038280008618910000612462130433840432824
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................2311130.001130000830000000000000000000000000000405422600002442864502355275231283715010723000000362818700000110224332313
...............................................................................................................................................................GGCGATTGTCGGTATGGTCGC..........................................................................................................................................................................211676.00676100240000000000000000000000000000001003000017127105493325512846161911120001630000035112001001016141215
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................221635.0063510060000000000000000000000000000000001000000403544442271287018181616000229000004820000000152526913
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG............................................................................................221558.0055847050000000000000000000000000000000000000023425595023513563312246240006330000000101000013230
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................231533.0053300013900000000000000000000000000000000000000127233340163022423721291700026260000000200000000200
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................231409.0040906025700000000000000000000000000000000100000071942931671211000110000010400000030000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................241393.0039300050000000000000000000000000000000010000011516303219532158281729180004400000000200000010021
...........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT...........................................................................................241315.0031500070000000000000000000000000000000002000004962182183683064360009000000118000000128763
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAG...........................................................................................231151.001510006000000000000000000000000000000000000614899152257217678000250000000200000000100
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201145.00145000120100000001000000010000000000020200000006243394620110009440000003800002075313
..............................................................................................................................................................TGGCGATTGTCGGTATGGTCGC..........................................................................................................................................................................221141.00141000400000000000000000000000000000000010000018766101661842640001050000011500000021431
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221126.001261013100000000000000000000000000000000100000076624163123200031200000102000001171534
............................................................................................................................................................................................................................................TGACTAGACCGAACACTC................................................................................................181110.00110000300000000000000000000000000000000000001116811931241341640001200000000200000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................241105.001050001300000000000000000000000000001000000000078443123133752000740000010100000020311
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA...........................................................................................23187.008700040000000000000000000000000000000110000019373413331164000100000000600000134710
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA...........................................................................................23170.007000017000000000000000000000000000010013000000332333231020000290000010300000024110
............................................................................................................................................................................................................................................TGACTAGACCGAACACT.................................................................................................17167.0067000000000000000000000000000000000000000000131100212002001000000001121000000201153
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21154.005400022000000000100000000000000000000001000000011015132111000660000001000000000000
...............................................................................................................................................................GGCGATTGTCGGTATGGTCG...........................................................................................................................................................................20153.005300010000000001000000000000000000000000000000000000000000000600000318000000306123
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG...........................................................................................23145.00450001000000000000000000000000000000001000010111445352223000010000000300000011300
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT............................................................................................22142.00420003000000000000000000000000000000000000001116046252020000330000000100000001010
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................25136.00360006000000000000000000000000000000058400000110202011000000032000000000000000000
...............................................................................................................................................................GGCGATTGTCGGTATGGTCGCC.........................................................................................................................................................................22135.003500033000000000000000000000000000000000000000100000000000000000000000100000000000
..............................................................................................................................................................TGGCGATTGTCGGTATGGTCGCT.........................................................................................................................................................................23131.00310001000000000000000000000000000000101500001111011000000000000000040400000012132
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTGT..........................................................................................24128.00280002000000000000000000000000000000000000000120141040421000220000000000000000101
...........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGC............................................................................................23128.00280007000000000000000000000000000000000000000040001000000000000000003500000031112
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20126.00260002000000000000000000000000000000000000000220036041002100120000000000000000000
droMoj3
ACAAAGG----------------------------------A------GGAGTGTTTCAGTTCCAGTGTTTCACTA-------TCAGTGTTT-C--ACT---------TTCAGTGTTTCATTTCCAGTGTTCGAAAATTATAAAATTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA---C---ATA-------TA--------CACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTC-A------------ATTATAAAATT-TCTAGTGCATGGTTCAAACTTAAA-----AAGAAA--ACSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................2311201864.00120186419135541225106626611
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................231229220.002292200225002289950
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................221172966.00172966913735201592200
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................24124007.00240070144610225591
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................22110104.0010104026050074990
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................2416588.00658812340063521
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2114274.00427427120035600
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................2313832.003832020038300
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................2413555.00355513610031930
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................2311832.0018320840017480
...............................................................................................................................................................GGCGATTGTCGGTATGGTCTCT.........................................................................................................................................................................2211086.0010860100010760
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................2311020.001020075009450
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221930.00930358008690
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................221776.00776027017480
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................231494.0049409004850
...............................................................................................................................................................GGCGATTGTCGGTATGGTCTCC.........................................................................................................................................................................221382.0038200003820
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................191325.0032507003180
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTTC.........................................................................................251277.00277010002670
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................251241.00241072001690
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201237.00237296001390
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC...........................................................................................221217.0021700002170
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT............................................................................................221170.0017001001690
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................191159.00159047001120
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................241136.00136014001220
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................211136.00136013001230
...............................................................................................................................................................GGCGATTGTCGGTATGGTCTC..........................................................................................................................................................................211118.0011804001140
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................211116.0011608001080
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTCC.........................................................................................251103.001030500980
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20198.009801100870
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................24180.00800700730
droGri2
GAATATAA--AATGGTGA-----------------------A--------TT--------TTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTG-C--AGTCAAACCCAG-CCAG------------------------------TATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAAC-CTAA-AC---TCT---ATAT----ACAAT--------ATATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGC-A------------TC---AGTTTT-GG----------TT---AAATGAA--AAA------TGATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................23219.0038533
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................2221.50321
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2121.00220
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................2320.50101
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................2220.50110
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2420.50101
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................2020.50101
droAna3
AGAATCA---AT------TCAT-----------------CAA--------AT--------T--------------G-------TAAGTGATTTT-TAGCAT-------CAGAA--------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCAC-AAAA-AA---ATT---GGTT----ACCAACAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTA-A-----------AGT---G-ACTT-GG---------------AAATGTA--AAG------TTTCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................23141249.004124961228095121135643330
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................2317839.0078391780729002
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................2214133.0041336732298071326
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................241568.0056819431111214
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................211376.003762225189509
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................231134.0013401340000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................22170.007003633001
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................20170.007012336055
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................22170.007049147000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................23167.006704621000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................24160.00601509000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................24145.00452358000
...............................................................................................................................................................GGCGATTGTCGGTATGGTCGCT.........................................................................................................................................................................22138.00381343000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................19133.00331311000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21132.00324197002
...............................................................................................................................................................GGCGATTGTCGGTATGGTCGC..........................................................................................................................................................................21128.00281260001
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................22122.00220201001
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................23122.00220165100
...............................................................................................................................................................GGCGATTGTCGGTATGGTCGCC.........................................................................................................................................................................22117.00170170000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................21115.00151131000
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20111.0011065000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................2318.008062000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT............................................................................................2217.007070000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTC................................................................................................1816.006051000
..............................................................................................................................................................TGGCGATTGTCGGTATGGTCGC..........................................................................................................................................................................2215.005041000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................2515.005014000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................1915.005050000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC............................................................................................1815.005041000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG.............................................................................................2014.004310000
.....................................................................................................................................................................................TTTTCAC-AAAA-AA---ATT---GGTT----ACCAAC...................................................................................................................................2614.004040000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC...........................................................................................2214.004040000
.....................................................................................................................................................................................TTTTCAC-AAAA-AA---ATT---GGTT----ACCA.....................................................................................................................................2414.004040000
.....................................................................................................................................................................................TTTTCAC-AAAA-AA---ATT---GGTT----ACC......................................................................................................................................2314.004040000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC...........................................................................................2314.004040000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT.............................................................................................2114.004002011
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCC...........................................................................................2114.004040000
droBip1
AGAA---TCCAG------TCAT-----------------C-A--------AA--------T--------------G-------TAAGTGGTTAT-TAGCAT-------CAGAA--------------------------------TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCAC--AAAAG---------GGTT----TCCATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTA-A-----------AGT---G---TT-TC---------------AAATAGT--------------GSizeHit CountTotal NormTotal
No Reads
droKik1
CTCCAACAG------CA---GCACCAAGAAAGTAAAGTTC-CAAAAGTGAAA--------A--------------G-------AAACAGCTAAT-T------------ACCAG--------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA---A---CCA-------GGTT----CCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTA-G------------GG---GA---T-AA----------------AG---------------T-GCSizeHit CountTotal NormTotal
No Reads
droFic1
CTTCAAACA---AACCAATAAT-----------------C-C------------------A--------------A-------CAAGTGAACTTAAGGCTC-------ATCAG--------------------------------TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA---A---C---------ATTT----CCTTTCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAA-G------------GT---GAAGTT-AC---------------CAGTGAA-----A-------AASizeHit CountTotal NormTotal
No Reads
droEle1
ATACAAAGC------CA---ATA----------------C-A--------AA--------A--------------G-------TAAGTGATAAT-CGGTGC-------TCCAG------------------------------T-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA---A---T---------GGTT----TCGACCAAG---------CGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCA-A------------GT---GATGTTTTT---------------TAGTGAA-----A-GA----GGSizeHit CountTotal NormTotal
No Reads
droRho1
ATATAAATA------CA---ATA----------------C-A--------AA--------A--------------G-------TAAGTGATAAT-TGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT---A---C---------GGTT----CCGACCAAG---------CTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCT-A------------GT---GAAATT-AT---------------TAGTGAA-----AAGAAG--ACSizeHit CountTotal NormTotal
No Reads
droBia1
AAACTGAAA-AA--T---ACGTG----------------C-C--------AA--------A--------------G-------TAAGTGAGAA--GGGC-C-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---C---------GGTG----ACGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGA-A------------GT---GAAGTT-AA---------------AGGTG-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
AACCAAAGA-AA------TAATC----------------T-C--------AA--------A--------------G-------TAAGTGATACC-AGGCTC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---C---------GATT----ACCATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTT-A------------GT---GAAGTT-AA----------------AG-----------------TTSizeHit CountTotal NormTotal
No Reads
droEug1
CTTTAAAC-------------T-----------------G-A--------AA--------A--------------G-------TAAGTGATAAT-TGGCAA-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA---A---CGA---------------------------------CTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTA-A------------GT---GAAAGT-TA-------------AAAAGCAAAAATAA------AGATSizeHit CountTotal NormTotal
No Reads
dm3
AAATCAAA----------AAAT-----------------C-A--------AG--------A--------------G-------TAAGTGATATT-GGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---AGAAA---------GGTT----TCGATTAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---AAAGTT-GC---------------GAGTGAA-----A--------ASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................231525385.0052538500001844492491179644580310000000150094021181100107123122121319641123116271130002830000000000000000005431528573130591871321553705829104251310212210513823417245933700554163110617284194130431747304473416410201311974721110000025110098522175144797567043979747361422316330970102650415035101026004113118241811147801225711590005072102102163170000003013724244844828281448487482623146306000009401128001087726728710417412145254925398772141225101851011117538195281574923038250128161353514111720659313929815573919202151438155920102739133268554211331714564181459243861062591524831801441731980
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT.........................................................................................................................................................................22145803.00458030000402895253516000000000000000000000000300000000000000000100000000000000000000000101001034815757615729812144401600421422010331029142114211860260073055191024000000000000100000000000821058116736470100010000000000000100020200000100000000000000000000000805000200000000000010011170110010000073640000000000000000010001000000210000000402000000110132524201400000000000120011000100000001120200000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22124186.00241860000011391136811100000000001001000000005101021032032000072100080000000000000000000000004322323887804500116400111249610618631623104540229093013000212000000000000100167215993818229020524100041644630005000901600003202001200051012120300010000801113000000100651166972611652730641412190000101512350132129120205601381851042161310029210313420221015011525132512316541150020200006031210912053023942225444886747254531310
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2118414.0084140000001314120000000000000000000000003493000000010111000110000010000000000000000000000003935381311100001202100311820001040006751016001000000010000000000000270331549243927000140000000000000101000001001000100001021000000000000000500000000000101116100421220002000024833800100001002000031601000110200130202701211028010413111162952010300113202001110100702014013112911102143130
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2415866.0058660000003201770000000000000000000000000000000000400100000000000000000000000000000000034318415528240000210001013302600301411000149342340100001010001000000000001263267255063040001000000000000000000010010010100000010120010000000000000100000000000011112056020300200001052070010001010400000110000000101021021221116132100030102035247004000010010031004042112300001259150112270
...............................................................................................................................................................GGCGAATGTCGGTATGGTCT...........................................................................................................................................................................2015774.0057740000000410000000000000000000000000540200000000000000000000000000000000000000000000006012270000000010000000000001000400000000000000000000000000017191464000000040000000000000000000000000000000000000000000000000000000000000000000000000000000003400000000000000000000000000000000000000000000000002303200000000100000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................2014804.004804000000000000000000000000000000000025930000001003000000000000000000000000000000000000517200000100000010000000000000120000000000000000000000000010157119889250000000000000040610000000000000000000020100000000000000002100200000000030500070300000000809200100100000001021000000000000600026010103010010021937465501011000010000018219130124034160721141421150
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................2313154.00315400000015513810000000000000000000000000000000000000000000000000000000000000000000000002491499814136003002000001001700009170008112043000000001000000000000000961593422562200000000000000000000000000000000000000000200000000000000000000000000000000001036110000000003568000000000020000250000000000000000201150300000000110517700000000000101000100000010000001040001020
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTC..........................................................................................................................................................................2112028.00202800000069220000000000000000000000001000000010000000000000000000000000000000000000016027216720200000200000000000200273300028103000000000100000000000000013789732410000000000000000000000000000000000000000000000000000020000000000000010000000010200000000138000000000000000000000010000000000000100000000000111192400600001000000000000000000010000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................2411874.0018740000006192100000000000000010000000000200000000000000000004000000000000000000000000152111487625000002002000000000008700059502700000000000000000000000057151359108181000020030000000000000000000000000000000000000000000000000000000000000000131317321620001100305200000000000000021000000000000101110415040000000103812000000000000000000010000010000000150001000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................2511018.0010180000002102000000000000000000000000000000000000000000000000000000000000000000000000926825491600000000100000000000010003100400000000000000000000000014356519200000100000000000000000000000000000000000200000000000000002000000000000000403070023100010002419000000000000000000000000000000000000010000000000038433000020000000000000000000000000000120000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................231501.005010000101478517000000000000000000000000001000000000000000000000000000000000000000000003877108001000000000100100001400082032001000000000000000000000317423740000000000000010000000100000000000100000000000000000000000000000000000000000008011001000069000000000000000000000000000000002200001600000100073900000000000000000000000001000000000001000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................191419.0041900000000000000000000000000000000001650100000000000000000002000000000000000000000000500000000000010000100000020000410700000000000000000000000011715120300000000000000000000000000000000000000000000000000000000000000000030000001000300000000008220000000000000000100000000000000000020000000000000845410000000000000000100000000000100100000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................231390.00390000010299100000000000000000000000000000000000000000000000000000000000000000000000101212170000000000000000000054000261031000000000000000000000000926397840000000000000000000000000000000000100000020000000000000000000000000000000000000010000000036000000000010000010001000000000000000000000000000065200000000000000000000000000000000010000100
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221359.003590000001420000000000000000000000000000000000000000000000000000000000000000000000003125162010000000000000000000000000170090010000000000000000000003818160000000000000000000000230000000100000000006000000000000000000000000000000000000210800000000470000000000000000200000000000000000000300000000000121900000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................221268.0026800000002340000000000000000000000000000000000000000000000000000000000000000000000074131300000010000011000000000000720000000000000000000000000011317304100000000000000000000010000000000010000000000000000000000000000000000000000000303000100001390000000000100001700001000000000000010000000000000741400000000000000000000000020000100800011100
.....................................................................................................................................................................................TTTTCAA---AGAAA---------GGTT----TCGATTAAG---------CG.....................................................................................................................271195.0019500000000000000000000000000000000000000000000000000000000000000000000000000000000080500000000000000000000000000000000000000000000000000000000436010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000110000000000000000000000000000000000000000000000000163200000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................241188.00188000000020000000000000000000000000000000000000000000000000000000000000000000000000121183020000000000000000000001000100000000000000000000000000006824900000000000000000000000000000000000000000002000000000000000000000000000000010001010000000026000000000000000000000000000000000001000000010000043600000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................211160.0016000000000100000000000000000000000000000000000000000000000000000000000000000000000090372000000000000200000000000021030000000000000000000000005491000000000000000000000000000000000000000000100000000000000000000000000000001000000300000000670000000000000000300000000000000002000000000000000701600000000000000000000000000000000020000000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................191141.00141000000000000000000000000000000000000000000000000000000000000000000000000000000000130161000000000010012010000000000400000000000000000000000000031620800000000000000000000000000000100000000000000000000000000100000000000000000000000000000000055000000000000000000000000000000000000000000000000033100000000000000000000000000000000000000000
.............................................................................................................................................................ATGGCGAATGTCGGTATGGTC............................................................................................................................................................................211125.001250000000000000000000000000000000000000000000000000000000000000000000000000000000006032000000000000000000000000000000000000000000000000000000152840000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000080900000000000000000000000000000000020000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC.........................................................................................................................................................................221123.00123000000461100000000000000000000000000000000000000000000000000000000000000000000000309032000000100000000000000140000002000000000000000000000000014600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000029000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................201121.001210000000110000000000000000000000000200000000000000000000000000000000000000000000001128410000000000000010000000000400300000000000000000000000011591170000000000000000000000000000000000000000000000000000000000000000000000000000001000000000036000000000000000000000000000000000000000000000000026400000000000000000000000000000000000000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTC............................................................................................................................................................................191113.001130000000000000000000000000000000000240000000000000000000000000000000000000000000000300020000000000000000000000000000000000000000000000000000040157000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000019200000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT...........................................................................................18197.00970000000000000000000000000000000000000000000001000000000000000000000000000000000001034110000000000014110000000000010000000000000000000000000081025010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000200000000000000016200000000000000000000000000000000000000000
...............................................................................................................................................................GGCGAATGTCGGTATGGT.............................................................................................................................................................................18193.009300000000000000000000000000000000000000000000000000000000000000000000000000000000050001000000000000000000000000010000000000000000000000000001752000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000059100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTATC........................................................................................26190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................22180.0080000000111117000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000001000000000000000000000000000213500000000000000000000000000000000000000000000000000000000000000000000000000000001010000000053000000000000000000000000000000000000000000000000021200000000000000000000010000000000000000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCTT........................................................................................................................................................................23176.0076000000000000000000000000000000000000000000000000000000000000000000000000000000000118161160000000000000001000002000100100000000000000000000000005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
..............................................................................................................................................................TGGCGAATGTCGGTATGGTCTCT.........................................................................................................................................................................23165.006500000001000000000000000000000000000000000000000000000000000000000000000000000000016001600000000000000000000800000006000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000023100000000000000000000000000000000000000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCA.........................................................................................................................................................................22157.005700000061011000000000000000000000000000000000000000000000000000000000000000000000001910020000000000000004000005000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCTA........................................................................................................................................................................23156.005600000001000000000000000000000000000000000000000000000000000000000000000000000000075001100000000000000000000400000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTTTCAA---AGAAA---------GGTT----TCGATTAAG---------.......................................................................................................................25155.00550000000000000000000000000000000000100000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000223001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000035600000000000000000000000000000000000000000
................................................................................................................................................................GCGAATGTCGGTATGGTCTCT.........................................................................................................................................................................21154.005400000002000000000000000000000000000000000000000000000000000000000000000000000000080101100000000000010000000040001006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTC................................................................................................18146.00460000000000000000000000000000000000000000000010000000000000000000000000000000000007010000000000000000000000000001004000000000000000020000000111001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000091300000000000000000000000000000000000000000
.................................................................................................................................................................CGAATGTCGGTATGGTCTCT.........................................................................................................................................................................20141.0041000000100000000000000000000000000020000000000000000000000000000000000000000000000620170000000000000000000014000100300000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTTTCAA---AGAAA---------GGTT----TCGATTAAG---------CGA....................................................................................................................28135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000
..............................................................................................................................................................TGGCGAATGTCGGTATGGTCTC..........................................................................................................................................................................22135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000001081000000000000010000000000000004000000000000000000000000001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................23134.00340000002000000000000000000000000000000000000000000000000000000000000000000000000002113000000100000000000000000000001000000000000000000000000102300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000014100000000000000000000000000000000100000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCG.........................................................................................................................................................................22134.003400000003000000000000000000000000000000000000000000000000000000000000000000000000010011200000000000000010000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................24134.0034000000010000000000000000000000000020000000000000000000000000000000000000000000000901000000000000000000000000000000000000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005100000000000000000000000000000000000000000001000006200000000000000000000000000000000000000000
.....................................................................................................................................................................................TTTTCAA---AGAAA---------GGTT----TCGATTAAG---------C......................................................................................................................26132.00320000000000000000000000000000000000000000000000000010000000000000000000000000000000051000000000000000000000000000000000000000000000000000000039000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA.........................................................................................25129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000203100000000000000000000002000100000000000000000000000000001200100000000000000000000000000000000000000000000000000000000000000000000000001000904000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................GAATGTCGGTATGGTCTCT.........................................................................................................................................................................19127.00270000000000000000000000000000000000100000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000155000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG.............................................................................................23127.0027000000030200000000000000000000000000000000000000000000000000000000000000000000000221700000000000000000000000000320000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCTC........................................................................................................................................................................23125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000005080000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droSim2
ATCCAAAA------------AG-----------------C-A--------AG--------A--------------G-------TAAGTGATATT-GGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAA--AGAAA---------GGTT----TCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---GAAGTT-GC---------------AAGTGAA-----A---------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................2311382795.001382795251910879609732122304085121213235111035311169942314100
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................231113758.001137583351081128210003113785026800000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22169704.00697042838646695171922272860658882781634000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................23154047.00540478652537391002160016000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................1914915.0049151994845135008191500000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2414724.0047241210225250015101138742053901000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2114456.004456281325101132410844582143900000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG............................................................................................2213354.00335495333800000000200000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................2412731.00273141978000211386276119000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................2311653.00165341164700000000100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................2511566.00156611701006065875207700000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................2211150.0011508278700000119033102000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT.........................................................................................................................................................................221976.009761147610014324822201000000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221722.0072211557150010343407900000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201603.00603813100315511057817501000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................231478.004781132200063635902300000
.....................................................................................................................................................................................TTTTCCAA--AGAAA---------GGTT----TCGATCA..................................................................................................................................241299.002990029010000340100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTC................................................................................................181266.00266002070325008230000000
.....................................................................................................................................................................................TTTTCCAA--AGAAA---------GGTT----TCGATCAAG---------.......................................................................................................................261171.001710016000000370100000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................211170.001700010100000251403000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................241137.00137017700010191502400000
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................201124.00124007300000201201900000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................221121.001218285000116501300000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................19196.0096002500010191603500000
.................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT...........................................................................................18181.008110370000019143700000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................24174.0074006400000350200000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC...........................................................................................22167.0067006700000000000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTC..........................................................................................................................................................................21159.00590029001201590300000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC.........................................................................................................................................................................22158.0058005800000000000000
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG.............................................................................................23149.004900130000021150000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT............................................................................................22145.00451060000024140000000
...........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT...........................................................................................24145.0045004100000200200000
.....................................................................................................................................................................................TTTTCCAA--AGAAA---------GGTT----TCGATCAAG---------CG.....................................................................................................................28137.0037003000010510000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG...........................................................................................23136.00360020000000001600000
.....................................................................................................................................................................................TTTTCCAA--AGAAA---------GGTT----TCGAT....................................................................................................................................22136.0036003300000110100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG..............................................................................................20136.0036003600000000000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................24135.0035003000000110300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACT.................................................................................................17134.0034000000108250000000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................21133.0033002400000410400000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG...........................................................................................22132.0032003200000000000000
.............................................................................................................................................................ATGGCGAATGTCGGTATGGTC............................................................................................................................................................................21129.00290015000000101300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................23127.0027002400000000300000
...................................................................................................................................................................................................................................................ACCGAACACTCGTGCT...........................................................................................16127.0027000000001980000000
............................................................................................................................................................................................................................................TGACTAGACCGAACAC..................................................................................................16125.00250000000010150000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCT...........................................................................................................................................................................20115.001500900010220100000
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT..............................................................................................22115.0015001000000000500000
droSec2
CAACAATCA-AA------AAAT-----------------C-A--------AG--------A--------------G-------TAAGTTATATT-GGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA---ATAAA---------GGTT----TCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---GAAGTT-GC---------------AAGTGAA-----A---------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................231271567.002715671362212640486136
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22110716.001071666310498149
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2412288.00228873225523
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................2111158.001158102112818
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................231482.004824046612
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................221440.00440114326
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................241333.00333603189
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221204.002041030992
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................251192.00192201873
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201140.00140221333
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................23188.008841785
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21173.007340681
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................23152.005210510
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................24148.004800471
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT............................................................................................22145.004540392
.....................................................................................................................................................................................TTTTCCA---ATAAA---------GGTT----TCGATCAAG---------CG.....................................................................................................................27134.003420311
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT.........................................................................................................................................................................22132.003250270
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................22122.002202182
.................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT...........................................................................................18121.002100210
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20121.002110200
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................19120.002010190
.....................................................................................................................................................................................TTTTCCA---ATAAA---------GGTT----TCGATCAAG---------C......................................................................................................................26118.001800180
............................................................................................................................................................................................................................................TGACTAGACCGAACACTC................................................................................................18116.001630130
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................19116.001610150
.....................................................................................................................................................................................TTTTCCA---ATAAA---------GGTT----TCGATCAAG---------.......................................................................................................................25112.001200120
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT..............................................................................................2219.0090090
.............................................................................................................................................................ATGGCGAATGTCGGTATGGTC............................................................................................................................................................................2119.0090081
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................2419.0091080
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................2117.0072050
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA...........................................................................................2316.0060060
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCTCT.............................................................................................2116.0061041
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................2315.0050050
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT............................................................................................2214.0040040
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT.............................................................................................2113.0030030
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT............................................................................................2213.0030030
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................2413.0030030
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT..........................................................................................2413.0030021
...............................................................................................................................................................GGCGAATGTCGGTATGGTCT...........................................................................................................................................................................2013.0030030
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA.........................................................................................2513.0030030
..........................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG.............................................................................................2313.0030030
.....................................................................................................................................................................................TTTTCCA---ATAAA---------GGTT----TCGATCAAG---------CGA....................................................................................................................2812.0020020
.....................................................................................................................................................................................TTTTCCA---ATAAA---------GGTT----TCGATCA..................................................................................................................................2312.0020020
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCTT..........................................................................................2212.0020020
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT..........................................................................................2312.0020020
droYak3
CTACAAATC---AAC-AGTAAT-----------------G-CAAAAGAGAAG--------A--------------G-------TAAGTGTTA-T-AGGCAC-------TCCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---AGA-------GGTT----TCGATCAAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTC-A------------GT---GAAGTT-GC---------------AAGTGAA-----ATTAAT--CASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................2311113308.00111330841019110027701097537210740010
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................231264917.002649177702646062340000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................22156464.005646457125223441544300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................24112894.001289441122915941300000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................2314780.00478010477630000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT.........................................................................................................................................................................2212118.002118212088270000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................2311773.0017731501702541100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................2411451.001451001425250100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................2211083.001083107882940000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................211892.00892336732111100000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC.........................................................................................................................................................................221709.007090070900000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................241530.0053010464650000000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221468.0046809416420100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................231213.002130021210000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................221203.002030019580000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................191195.001954018920000000
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTC..........................................................................................................................................................................211169.001690016540000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................231168.0016802146191000000
...........................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT...........................................................................................241136.001360013420000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201118.001181087300000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT............................................................................................221115.001150011500000000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC...........................................................................................22195.0095009500000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................24177.0077007160000000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................19175.00750059150100000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21168.00680047201000000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................25157.00570128270100000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC...........................................................................................23155.0055005500000000
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20154.0054004860000000
droEre2
CTACAAATC---AACAACAAAT-----------------G-C--------AG--------A--------------G-------TAAGTGTTA-T-AGGCAC-------TGCAG--------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA---A---GAA-------GGTT----TCGATCGAG---------CGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCAC-A--CT--------GT---GAAGTT-GC---------------GAGTGAA-----A-------ACSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT...........................................................................................231107629.001076293537544691495304817
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC...........................................................................................23110737.001073719105590158010
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC............................................................................................2219280.0092801836142029420130
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT..........................................................................................2411090.001090457390302130
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG.............................................................................................211930.00930534500427000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT...........................................................................................221335.0033528225028000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT............................................................................................221287.002872750210000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC...........................................................................................231157.00157015700000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG...........................................................................................231150.00150067083000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT..............................................................................................201142.001421230116020
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCT.........................................................................................................................................................................22193.0093206409000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA..........................................................................................24185.00851351021000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC..........................................................................................24183.0083161021000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT...........................................................................................21154.0054926019000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA............................................................................................22137.0037126010000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA...........................................................................................23131.0031216011020
...............................................................................................................................................................GGCGAATGTCGGTATGGTCTCC.........................................................................................................................................................................22125.002502500000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCG...............................................................................................19124.002401806000
...............................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT...........................................................................................20120.00207508000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC...........................................................................................23117.001701403000
................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT...........................................................................................19116.001621013000
.............................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC............................................................................................21114.00149401000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT.........................................................................................25112.00121209000
..............................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC............................................................................................20111.00113305000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT............................................................................................2219.0093600000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG..........................................................................................2419.0095202000
............................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT..........................................................................................2417.0070304000

Generated: 10/20/2015 at 10:18 PM