ID:

dps-mir-276c

 Coordinate:

4_group4:3170500-3170615 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

antisense_to_intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.5 -31.5 -31.5

Flybase annnotation

Antisense to intron [Dpse\GA28999-in]; Antisense to CDS [Dpse\GA28999-cds]

No Repeatable elements found

Sense Strand Reads

GTTTTTGACCTTGTGGCCCCGCACACAGCCGAAATGAAAAGTGAAAGAAGGAGTGATCCAGAGCGGATATACCATCAGCCCTGTTTCGAGCTTCATTTTCGTTAAATTGACGGGAAAAGGAACTTGAGAACAAGGTTGATTGGATTCCTGTTATGAAATCTACTCACCCAAGTGATGTGCTATGTGATCCCGCTCCTCGGACTCGCCAATGATAAA

*************************************************************(((((..((.(((((((((.(((((((((.(((.(((((((((...)))))))))...))))))))).))).)))))).)))))..)))))..************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011

testis

 M022

male body		 V112

male body		 M040

female body

 GSM444067

head

 SRR902010

ovaries

 SRR902012

CNS imaginal disc

 M062

head
....................................................................................................................AAGGAACTTGAGAACAAGGTTGA............................................................................. 23 0 1 20102.00 20102 19558 255 154 96 18 7 7 7
....................................................................................................................AAGGAACTTGAGAACAAGGTTG.............................................................................. 22 0 1 6976.00 6976 6710 67 111 83 3 0 0 2
....................................................................................................................AAGGAACTTGAGAACAAGGTTGT............................................................................. 23 1 1 1538.00 1538 1498 24 14 1 0 1 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAT............................................................................ 24 0 1 1078.00 1078 1011 44 17 5 0 0 0 1
.....................................................................................................................AGGAACTTGAGAACAAGGTTGA............................................................................. 22 0 1 1068.00 1068 1030 20 5 13 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGA............................................................................. 23 1 1 774.00 774 755 10 5 1 1 0 2 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTG.............................................................................. 22 1 1 553.00 553 547 2 3 1 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTT............................................................................... 21 0 1 369.00 369 357 3 4 5 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTG.............................................................................. 21 0 1 209.00 209 191 1 6 11 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAA............................................................................ 24 1 1 179.00 179 178 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGT................................................................................ 20 0 1 119.00 119 117 2 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATT........................................................................... 25 0 1 89.00 89 80 7 2 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGAT............................................................................ 23 0 1 79.00 79 73 1 1 2 0 2 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGT............................................................................. 22 1 1 69.00 69 66 0 0 3 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGG................................................................................. 19 0 1 53.00 53 47 6 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGC............................................................................. 23 1 1 52.00 52 45 6 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGT............................................................................. 23 2 1 47.00 47 47 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAGGGTTGA............................................................................. 22 1 1 40.00 40 40 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTT............................................................................ 24 1 1 40.00 40 39 1 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAGGGTTG.............................................................................. 21 1 1 34.00 34 34 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTT............................................................................... 21 1 1 31.00 31 30 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACA.................................................................................... 16 0 1 25.00 25 24 0 0 0 0 0 1 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTTGG........................................................................ 28 2 1 25.00 25 25 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAAA........................................................................... 25 2 1 20.00 20 19 1 0 0 0 0 0 0
...................................................................................................................AAAGGAACTTGAGAACAAGGTTGA............................................................................. 24 0 1 20.00 20 19 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGAT............................................................................ 24 1 1 19.00 19 19 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGTTTGA............................................................................. 23 1 1 18.00 18 10 8 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGAA............................................................................ 23 1 1 17.00 17 17 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTTCAG....................................................................... 29 3 1 16.00 16 16 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGGTGA............................................................................. 23 1 1 14.00 14 14 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTTT........................................................................... 25 1 1 13.00 13 12 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAG.................................................................................. 18 0 1 12.00 12 12 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGG............................................................................. 23 1 1 11.00 11 2 8 0 1 0 0 0 0
...................................................................................................................AAAGGAACTTGAGAACAAGGTTG.............................................................................. 23 0 1 11.00 11 11 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTT.............................................................................. 22 1 1 10.00 10 10 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGAA............................................................................ 24 2 1 10.00 10 10 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGAACAAGGTTGA............................................................................. 24 1 1 9.00 9 9 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGCTTGA............................................................................. 23 1 1 9.00 9 7 2 0 0 0 0 0 0
....................................................................................................................AAGGAACTCGAGAACAAGGTTGA............................................................................. 23 1 1 9.00 9 8 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAG............................................................................ 24 1 1 9.00 9 9 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAC............................................................................ 24 1 1 9.00 9 7 1 0 0 1 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTT.......................................................................... 26 1 1 8.00 8 8 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGATGA............................................................................. 23 1 1 7.00 7 7 0 0 0 0 0 0 0
....................................................................................................................AAGGAATTTGAGAACAAGGTTGA............................................................................. 23 1 1 7.00 7 7 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGGTG.............................................................................. 22 1 1 7.00 7 5 2 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATGG.......................................................................... 26 1 1 7.00 7 7 0 0 0 0 0 0 0
....................................................................................................................GAGGAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 7.00 7 7 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGATAACAAGGTTGA............................................................................. 23 1 1 6.00 6 6 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGGACAAGGTTGA............................................................................. 23 1 1 6.00 6 4 1 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATA........................................................................... 25 1 1 6.00 6 6 0 0 0 0 0 0 0
....................................................................................................................AAGAAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 5.00 5 5 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAAAACAAGGTTGA............................................................................. 23 1 1 5.00 5 5 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAGGGTTGAT............................................................................ 23 1 1 5.00 5 5 0 0 0 0 0 0 0
...................................................................................................................AAAGGAACTTGAGAACAGGGTTG.............................................................................. 23 1 1 5.00 5 4 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTAA............................................................................. 23 1 1 5.00 5 5 0 0 0 0 0 0 0
....................................................................................................................AATGAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 5.00 5 5 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAATGTTGA............................................................................. 23 1 1 5.00 5 2 3 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACACGGTTGA............................................................................. 23 1 1 5.00 5 5 0 0 0 0 0 0 0
.....................................................................................................................AAGGATTTGAGAACAAGGTTGA............................................................................. 22 3 1 5.00 5 5 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATG........................................................................... 25 1 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGACTCGC........................................................................ 28 3 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTC.............................................................................. 22 1 1 4.00 4 3 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGGGAACAAGGTTGA............................................................................. 23 1 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTCGA............................................................................. 23 1 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGGTGA............................................................................. 23 2 1 4.00 4 4 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAGGGTTGT............................................................................. 22 2 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATCAG......................................................................... 27 2 1 4.00 4 4 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTT............................................................................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTAAGAACAAGGTTGA............................................................................. 23 1 1 4.00 4 4 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGATT........................................................................... 24 0 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................................................................TAGGAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 4.00 4 3 0 0 0 0 1 0 0
....................................................................................................................AAGGAACTTGAAAACAAGGTTG.............................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAAAAAGGTTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAGCTTGAGAACAAGGTTGA............................................................................. 23 1 1 3.00 3 2 1 0 0 0 0 0 0
......................................................................................................................GGAACTTGAGAACAAGGTTG.............................................................................. 20 0 1 3.00 3 1 0 0 2 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGG................................................................................. 19 1 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................................................AAAGGAACTTGAGAACAAGGTTGT............................................................................. 24 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAGCAG......................................................................... 27 3 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTA............................................................................ 24 2 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................................................TAAGGAACTTGAGAACAAGGTTGA............................................................................. 24 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAAC..................................................................................... 15 0 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACGAGGTTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGCTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATGAT......................................................................... 27 3 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTTTGG......................................................................... 27 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGCACAAGGTTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AACGAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 3.00 3 2 0 1 0 0 0 0 0
....................................................................................................................AAGGAAATTGAGAACAAGGTTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAAGTTG.............................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGTAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTAAGAACAAGGTTG.............................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTAG......................................................................... 27 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAGT........................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATAGATT....................................................................... 29 3 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAAGTTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
......................................................................................................................GGAACTTGAGAACAAGGTTGA............................................................................. 21 0 1 3.00 3 2 0 0 1 0 0 0 0
....................................................................................................................AAGGAATTTGAGAACAAGGTTG.............................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGAAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAGGTG......................................................................... 27 3 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAAGAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGATG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGTT............................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................................ACAGGAACTTGAGAACAAGGTTGA............................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGGACTTGAGAACAAGGTTGA............................................................................. 23 1 1 2.00 2 1 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAATGTTGT............................................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTAGA............................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGGACAAGGTTG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATGCCA........................................................................ 28 3 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATAGTT........................................................................ 28 3 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTTG........................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGACAACAAGGTTGA............................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTCGAGAACAAGGTTGT............................................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTGG......................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGATG........................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................GAGGAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGATTTGG........................................................................ 27 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATC........................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTCAGAACAAGGTTGA............................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACCTGAGAACAAGGTTGA............................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGCTGA............................................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................AGCCCTGTTTCGAGCTTCATTT...................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAATGTTG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGAACAAGGTTG.............................................................................. 23 1 1 2.00 2 0 0 2 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTA.............................................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGTT................................................................................ 20 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGATGT............................................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGCTG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATAAG......................................................................... 27 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAAAAAGGTTG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTTC......................................................................... 27 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAA................................................................................... 17 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGT................................................................................ 19 0 1 2.00 2 1 0 0 0 0 0 1 0
....................................................................................................................ATGGAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAA.................................................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AATGAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 2.00 2 1 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGACGG.......................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAGCTTGAGAACAAGGTTG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGA................................................................................ 19 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGATC........................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAAGAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 2.00 2 1 0 0 1 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGTTT........................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTAGAGAACAAGGTTGT............................................................................. 23 2 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGATTTGG........................................................................ 28 3 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGGTGAT............................................................................ 24 1 1 2.00 2 1 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAACGTTGA............................................................................. 23 1 1 2.00 2 1 1 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGAC............................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................................AAAGGAACTTGAGAACAGGGTTGA............................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTTAGAACAAGGTTGA............................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGCTTG.............................................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACGAGGTTG.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAATGTTGA............................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTCA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACGAGGTTGAT............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAGGGGATG...................................................................... 30 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGTT............................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGGTG.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATGGAC........................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGTAACTTGAGAACAAGCTTGA............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTAT........................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGT................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAAT........................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGCACTTGAGAACAAGGTTGT............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGG................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGTTAC.............................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGAACAAGGTTGAT............................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................ACGGAACTTGAGAACAAGGTTGA............................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................AACGAACTTGAGAACAAGGTTGT............................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTTTTT......................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGGGAACAAGGTTT.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGGT............................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATGA.......................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGTAACTTGAGAACAAGGTTGA............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................AGAAAGGAACTTGAGAACAAGGTT............................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTTAGAACAAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGACGGTA........................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGCTC............................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGACCAAGGTTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGAAA........................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGGGAACAAGGGTGA............................................................................. 23 2 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTTCAG......................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAAAACAAGGTTGAT............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAGCAAGGTTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGTTGT.............................................................................. 22 3 2 1.00 2 1 1 0 0 0 0 0 0
.....................................................................................................................AGGGACTTGAGAACAAGGTT............................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0
....................................................................................................................AAGGAACTTGAGACCAAGGTTG.............................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................................................................AAGGAACCTGAGAACAAGGTTGT............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAAGTTGAT............................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................CAGGAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACCAGGTTGA............................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGTGAACAAGGTTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGATTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................TAAGGGACTTGAGAACAAGGTTG.............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAATTTGAGAATAAGGTTG.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAGAA.......................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGAACAGGGTTGA............................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACGGGGTTGA............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................GGAACTTGGGAACAAGGTTGA............................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACCAGCTT............................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGACC........................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................AAAGGAACTTGAAAACAAGGTTGAAA........................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAGCTTGAGAACAAGGTTGAT............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAATAAGGTTG.............................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGACA........................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGAACAGGGTTG.............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................TTAAGGAACTTGAGAACAAGGTTGA............................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAATAGGGTTGA............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGGACAAGGT................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTCTGG......................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTTCC........................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAATGTTGCT............................................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTGGT............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACATGGTTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAACGCTGA............................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGCT............................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACTAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGACT........................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGTAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGACAT.......................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAATTA......................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGACCAAGGTTGA............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGCAACTTGAGAACAGGGTTGA............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAATGTTGG............................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................AAGGACCTTGAGAACAAGGTTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGCTGAT............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGACCACGGTTGC............................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGATCAGGGTTGA............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTG............................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTATA........................................................................ 28 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................TAGGAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................GCAAAGGAACTTGAGAACAAGGTTGA............................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGATGG.......................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATGCT......................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGATTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATTTTGTT...................................................................... 30 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATGGGGTT...................................................................... 30 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGCTGT............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGACCAGGGTTGA............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATATAA........................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAGCAAGGTTGA............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGGTGAA............................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAGCAAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGCTGA............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGGACAAGGTTGATT........................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGCGAACAAGGTTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAACTTGAGAACAAGGTTGC............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAATAAGGTTGTT............................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAAGAACTTCAGCACAAGGTTGA............................................................................. 23 3 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTTGC............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGGACTTGAGAACAAGGTTGAT............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTAGAGAACAAGGTTGA............................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGACCAAGGTTGAT............................................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATAAC......................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGCAACTTGAGAACAAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTTT............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGTAC........................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................AAAGGAACTTGAGAACAAGGTT............................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACACGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGAAACTTGAGAACAAGGTTGAT............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................GAACTTGAGAACAAGGTTG.............................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGAGTTGA............................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTCG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGAACAAGTTTGA............................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAACT.......................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................AAAGGAACTTGAGAACAAGGTTGAAA........................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AAGGACTTGAGAACAAGGTTGA............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATAAAA........................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................ATCGGATAAGGAACTTGAGAACAAGGTT............................................................................... 28 3 1 1.00 1 0 0 0 1 0 0 0 0
.....................................................................................................................AGGAGCTTGAGAACAAGGTTG.............................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACCAGGTTGT............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................CAAGGAACTTGAGAACAAGGTTGT............................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTCGAGAACAGGGTTG.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGATCAAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGATCGT......................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGGGAACAAGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGATTGAT............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAATTTGAGAACAAGGTTGT............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................AAAAGGAACTTGAGAACAAGGTTGA............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGCA............................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................AGCCCTGTTTCGAGCTTCATT....................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGGTTGAATC.......................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGAAACTTGAGAACAAGGTTGC............................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACATGGTTG.............................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTCAGAACAGGGTTG.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................CGGTCAGCCCTGGTTCGA............................................................................................................................... 18 3 20 0.70 14 0 0 0 14 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGGTG............................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................AAGGAATTGAGAACAAGGTTGA............................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAAGTTGAA............................................................................. 23 3 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................AAGGAACATGAGAACAGGGTTG.............................................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................CTCCACTTACTCGCCAATG..... 19 3 20 0.35 7 0 0 0 7 0 0 0 0
....................................................................................................................AAGGAACTTGAGAACAGGTTG............................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0
.....................CACACAGCCTAAATGTAAGG............................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 1 0 0 0 0
.......................................................ATCCCGGGCGGATACACCA.............................................................................................................................................. 19 3 11 0.09 1 0 0 0 0 1 0 0 0
......................................................................................................TAAATCGACGGGACAAGAA............................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0
............................................................................................................GACGGGAAAAGGCAATCGA......................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

CAAAAACTGGAACACCGGGGCGTGTGTCGGCTTTACTTTTCACTTTCTTCCTCACTAGGTCTCGCCTATATGGTAGTCGGGACAAAGCTCGAAGTAAAAGCAATTTAACTGCCCTTTTCCTTGAACTCTTGTTCCAACTAACCTAAGGACAATACTTTAGATGAGTGGGTTCACTACACGATACACTAGGGCGAGGAGCCTGAGCGGTTACTATTT

**************************************************************(((((..((.(((((((((.(((((((((.(((.(((((((((...)))))))))...))))))))).))).)))))).)))))..)))))..************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 M062

head

 GSM444067

head

 SRR902010

ovaries
.......................................................................GGTAGTCGGGACAAGGCT............................................................................................................................... 18 1 1 1.00 1 1 0 0 0
..............CCGGGGCGTGTGACGGTTT....................................................................................................................................................................................... 19 2 4 0.25 1 0 1 0 0
.................................................................................................................................................AGGCGAATACTTTAGATCAGT.................................................. 21 3 4 0.25 1 0 0 1 0
...............................................................................................................................................................................................CGAGGTGAATGAGCGGTTAC..... 20 3 15 0.07 1 1 0 0 0
.................................................................ATATAAGGCAGTCGGGACA.................................................................................................................................... 19 3 18 0.06 1 0 0 0 1
........................................................................GTAGTCGGGACAAGGCTT.............................................................................................................................. 18 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 4_group4:3170450-3170665 - dps-mir-276c Known_mirbase GTTTTT----------------------------GACCTTGTGGCCCCGCACA-CAGCCGAAATGAAAAGTGAAAGAAGGAGTGATCCAGAGCGGATATA----------------CCATCAGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATTTTC-------GTTAAATTGACGGGAAAAGGAACTTGA--GAACAAGGTTGATTGGATTCC----TGTTAT-----------------------GAAATCTACTCACCCAAGTGATGTGCTATGTGATCCCGCTCCTCGGACTCGCCAATGATAAA
droPer2 scaffold_10:2189141-2189356 - dpe_70 confident GTTTTT----------------------------GACCTTGTGGCCCCGCACA-CAGCCGAAATGAAAAGTGAAAGAAGGAGTGATCCAGAGCGGATATA----------------CCATCAGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATTTTC-------GTTAAATTGACGGGAAAAGGAACTTGA--GAACAAGGTTGATGGGATTCC----TGTAAT-----------------------GAAATCTACTCACCCAAGTGATGTGCTATGTGATCCCGCTCCTCGGACTCGCCAATGATAAA
droWil2 scf2_1100000004521:8613641-8613874 - GTTT--GTTGGCACTTGGCAAGCTAAGC-GAGTTGACCTTGTGACCAGAGACGGCAGGCCAAA---------------------------AGCAAATAGAGCGTAAAGAAAATCTATCCCAAACACTTGTGTC----------------------------------------------------------------------------------------------------------------------------------------GA-TTTTATGATG-------GCTAA----ACAACAAAAGGGCCAAAATAAAAGCAGCTTAA----AGTCCTTTCTTTAAT----TTTTT--------------GGTAGTTACTTACCCAAATGATGTGCTATATGATCTCGTTCTTCGGATTCGCCAATGATAAA
droVir3 scaffold_12963:3639929-3639983 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAAATGATGTGCTATGTGATCCCGTTCCTCGGATTCGCCAATAATGAA
droMoj3 scaffold_6500:14049215-14049269 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAGATGATGGGCTATGTGATCCCGCTCCTCGGACTCGCCGATAATGAA
droGri2 scaffold_15252:3161171-3161225 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCACCCAAGTGATGTGCTATGTGATCCCGTTCCTCGGACTCGCCAATAATGAA
droAna3 scaffold_12916:11094159-11094213 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAAGTGATGTGCAATGTGATCCCGCTCCTCTGACTCGCCAATAATAAA
droBip1 scf7180000396572:751927-751981 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAAGTGATGTGCAATATGATCCCGCTCCTCGGACTCGCCAATAATAAA
droKik1 scf7180000302389:420170-420537 - CTTTTTGTTAGCACTTGGCAAAGGCGCCAAAGTCGACCTTGTGACC-GGCACA-CAGGC-------------------------ACCCAAAGCAAATAGAGCGTGTT-A-----------AAGC-CCAGTTCGATTACACTGGCCGATCCGGGGCACTGGAGGAAAAAGCGAAGATGATAAATCTGTTTGGCCGGTAGCCTGGATAAGTCACTTGACCCTTGAGGAGCCACACAGAAAATTATAGTTTAAAGTGGAACAAAGCCTTTAAAAACTTCTTTTTTTCCAAAAGTCAAATTAA----------------------GAAAGAAGATATAATCCT----TGTTATTAACCCTTCATGACCTTAACTCAAAACCCAACTCACCCAAATGATGTGCAATGTGATCGCGCTCCTCGGACTCGCCGATTATAAA
droFic1 scf7180000453932:184868-184923 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTCACCCAGGTGGTGGGCGATGTGATCGTGCTCCTCGGACTCCCCGATGACGAA
droEle1 scf7180000490753:47209-47266 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACCCAAGTGGTGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAA
droRho1 scf7180000778253:16400-16457 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTTACCCAAATGGTGGGCGATATGATCGTGCTCCTCGGACTCGCCGATGATGAA
droBia1 scf7180000302422:3842494-3842550 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACCCAAGTGGTGGGCGATATGATCGTGCTCCTCGGACTCGCCGATGATGAA
droTak1 scf7180000415871:399198-399253 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATACCCAAATGGTGTGCGATATGATCGTGCTCCTCGGACTCGCCGATGATGAA
droEug1 scf7180000409063:328576-328630 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCACCCAAGTGGTGGGCGATATGATCGTGCTCCTCGGACTCCCCGATGACGAA
dm3 chr2L:5651595-5651658 + AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAGTTTCTTACCCAGATGATGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAA
droSim2 2l:5456374-5456427 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCCAGATGATGAGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAA
droSec2 scaffold_5:3730394-3730447 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCCAGATGATGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATAATGAA
droYak3 2L:13541370-13541433 - AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTTGCTTACCCAGATGATGGGCGATGTGATCGTGCTCCTCGGACTCGCCAATGATGAA
droEre2 scaffold_4929:5739945-5739998 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCCAGATGGTGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTTTTT----------------------------GACCTTGTGGCCCCGCACA-CAGCCGAAATGAAAAGTGAAAGAAGGAGTGATCCAGAGCGGATATA----------------CCATCAGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATTTTC-------GTTAAATTGACGGGAAAAGGAACTTGA--GAACAAGGTTGATTGGATTCC----TGTTAT-----------------------GAAATCTACTCACCCAAGTGATGTGCTATGTGATCCCGCTCCTCGGACTCGCCAATGATAAASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGA........................................................................................................23120102.002010225596070181547195587
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTG.........................................................................................................2216976.00697667830203111067100
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGT........................................................................................................2311538.001538241000014114980
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAT.......................................................................................................2411078.001078445010017010110
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGA........................................................................................................2211068.001068201300005010300
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTT..........................................................................................................211369.00369350000403570
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTG.........................................................................................................211209.002091110000601910
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAA.......................................................................................................241179.00179100000001780
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGT...........................................................................................................201119.00119200000001170
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATT......................................................................................................25189.008970000020800
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGAT.......................................................................................................23179.007912000012730
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGT........................................................................................................22169.006903000000660
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGG............................................................................................................19153.005360000000470
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGC........................................................................................................23152.005260000010450
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACA...............................................................................................................16125.002500000000241
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAAA......................................................................................................25120.002010000000190
................................................................................................................................................................................................................................................................................................................AAAGGAACTTGA--GAACAAGGTTGA........................................................................................................24120.002010000000190
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGAA.......................................................................................................23117.001700000000170
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAG.............................................................................................................18112.001200000000120
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGG........................................................................................................23111.00118100000020
................................................................................................................................................................................................................................................................................................................AAAGGAACTTGA--GAACAAGGTTG.........................................................................................................23111.001100000000110
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTT.........................................................................................................22110.001000000000100
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAG.......................................................................................................2419.0090000000090
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAC.......................................................................................................2419.0091000010070
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATTT.....................................................................................................2618.0080000000080
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATA......................................................................................................2516.0060000000060
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATG......................................................................................................2514.0040000000040
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTC.........................................................................................................2214.0040000001030
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTT..........................................................................................................2014.0040000000040
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGATT......................................................................................................2414.0040000000040
...................................................................................................................................................................................................................................................................................................................GGAACTTGA--GAACAAGGTTG.........................................................................................................2013.0030200000010
................................................................................................................................................................................................................................................................................................................AAAGGAACTTGA--GAACAAGGTTGT........................................................................................................2413.0030000000030
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGTA.......................................................................................................2413.0030000000030
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAAC................................................................................................................1513.0030000000030
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATGAT....................................................................................................2713.0030000000030
...................................................................................................................................................................................................................................................................................................................GGAACTTGA--GAACAAGGTTGA........................................................................................................2113.0030100000020
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATTGG....................................................................................................2712.0020000000020
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGATG......................................................................................................2412.0020000000020
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATC......................................................................................................2512.0020000000020
.........................................................................................................................AGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATTT..........................................................................................................................................................2212.0020000000020
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTA.........................................................................................................2212.0020000001010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATTTC....................................................................................................2712.0020000000020
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAA..............................................................................................................1712.0020000000020
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGT...........................................................................................................1912.0020000000011
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAA.............................................................................................................1812.0020000000020
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGA...........................................................................................................1912.0020000000020
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGAC.......................................................................................................2312.0020000000020
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGG............................................................................................................1811.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATGA.....................................................................................................2611.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAGAA.....................................................................................................2611.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGACC......................................................................................................2511.0010000000010
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGACA......................................................................................................2411.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATTTCC...................................................................................................2811.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGACAT.....................................................................................................2611.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGTG.......................................................................................................2411.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATGCT....................................................................................................2711.0010000000010
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGC........................................................................................................2211.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGATAAC....................................................................................................2711.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTTT........................................................................................................2311.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGTAC......................................................................................................2511.0010000000010
................................................................................................................................................................................................................................................................................................................AAAGGAACTTGA--GAACAAGGTT..........................................................................................................2211.0010000000010
....................................................................................................................................................................................................................................................................................................................GAACTTGA--GAACAAGGTTG.........................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAACT.....................................................................................................2611.0010000000010
................................................................................................................................................................................................................................................................................................................AAAGGAACTTGA--GAACAAGGTTGAAA......................................................................................................2611.0010000000010
...............................................................................................................................................................................................................................................................................................................AAAAGGAACTTGA--GAACAAGGTTGA........................................................................................................2511.0010000000010
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGCA.......................................................................................................2411.0010000000010
.........................................................................................................................AGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATT...........................................................................................................................................................2111.0010000001000
droPer2
GTTTTT----------------------------GACCTTGTGGCCCCGCACA-CAGCCGAAATGAAAAGTGAAAGAAGGAGTGATCCAGAGCGGATATA----------------CCATCAGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATTTTC-------GTTAAATTGACGGGAAAAGGAACTTGA--GAACAAGGTTGATGGGATTCC----TGTAAT-----------------------GAAATCTACTCACCCAAGTGATGTGCTATGTGATCCCGCTCCTCGGACTCGCCAATGATAAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGA........................................................................................................231352.00352618031324
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTG.........................................................................................................221280.00280115020262
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGA........................................................................................................22120.00200500015
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGT........................................................................................................23117.00170000017
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTG.........................................................................................................21114.00140400010
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGT........................................................................................................2215.005000005
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAT.......................................................................................................2414.004000004
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTT..........................................................................................................2114.004000004
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGT...........................................................................................................2013.003000003
................................................................................................................................................................................................................................................................................................................AAAGGAACTTGA--GAACAAGGTTGA........................................................................................................2413.003000003
................................................................................................................................................................................................................................................................................................................AAAGGAACTTGA--GAACAAGGTTG.........................................................................................................2312.002000002
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGC........................................................................................................2312.002000002
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGG............................................................................................................1912.002010001
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAC.......................................................................................................2411.001000001
.........................................................................................................................AGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATTT..........................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................GAACTTGA--GAACAAGGTTG.........................................................................................................1911.001010000
.........................................................................................................................AGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATTTT.........................................................................................................................................................2311.001000001
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGG........................................................................................................2311.001000001
.................................................................................................................................................................................................................................................................................................................AAGGAACTTGA--GAACAAGGTTGAA.......................................................................................................2411.001000001
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTTGAT.......................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................GAACTTGA--GAACAAGGTTGA........................................................................................................2011.001000001
.........................................................................................................................AGC-CCTGTTTC----------------------------------------------------------------------------------------------------------------------------------------GAGCTTCATT...........................................................................................................................................................2111.001000100
...................................................................................................................................................................................................................................................................................................................GGAACTTGA--GAACAAGGTTGA........................................................................................................2111.001010000
..................................................................................................................................................................................................................................................................................................................AGGAACTTGA--GAACAAGGTT..........................................................................................................2011.001010000
droWil2
GTTT--GTTGGCACTTGGCAAGCTAAGC-GAGTTGACCTTGTGACCAGAGACGGCAGGCCAAA---------------------------AGCAAATAGAGCGTAAAGAAAATCTATCCCAAACACTTGTGTC----------------------------------------------------------------------------------------------------------------------------------------GA-TTTTATGATG-------GCTAA----ACAACAAAAGGGCCAAAATAAAAGCAGCTTAA----AGTCCTTTCTTTAAT----TTTTT--------------GGTAGTTACTTACCCAAATGATGTGCTATATGATCTCGTTCTTCGGATTCGCCAATGATAAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
No Reads
droVir3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAAATGATGTGCTATGTGATCCCGTTCCTCGGATTCGCCAATAATGAASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
No Reads
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAGATGATGGGCTATGTGATCCCGCTCCTCGGACTCGCCGATAATGAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
No Reads
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCACCCAAGTGATGTGCTATGTGATCCCGTTCCTCGGACTCGCCAATAATGAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads
droAna3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAAGTGATGTGCAATGTGATCCCGCTCCTCTGACTCGCCAATAATAAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
No Reads
droBip1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTACCCAAGTGATGTGCAATATGATCCCGCTCCTCGGACTCGCCAATAATAAASizeHit CountTotal NormTotal
No Reads
droKik1
CTTTTTGTTAGCACTTGGCAAAGGCGCCAAAGTCGACCTTGTGACC-GGCACA-CAGGC-------------------------ACCCAAAGCAAATAGAGCGTGTT-A-----------AAGC-CCAGTTCGATTACACTGGCCGATCCGGGGCACTGGAGGAAAAAGCGAAGATGATAAATCTGTTTGGCCGGTAGCCTGGATAAGTCACTTGACCCTTGAGGAGCCACACAGAAAATTATAGTTTAAAGTGGAACAAAGCCTTTAAAAACTTCTTTTTTTCCAAAAGTCAAATTAA----------------------GAAAGAAGATATAATCCT----TGTTATTAACCCTTCATGACCTTAACTCAAAACCCAACTCACCCAAATGATGTGCAATGTGATCGCGCTCCTCGGACTCGCCGATTATAAASizeHit CountTotal NormTotal
No Reads
droFic1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTCACCCAGGTGGTGGGCGATGTGATCGTGCTCCTCGGACTCCCCGATGACGAASizeHit CountTotal NormTotal
No Reads
droEle1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACCCAAGTGGTGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAASizeHit CountTotal NormTotal
No Reads
droRho1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTTACCCAAATGGTGGGCGATATGATCGTGCTCCTCGGACTCGCCGATGATGAASizeHit CountTotal NormTotal
No Reads
droBia1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTCACCCAAGTGGTGGGCGATATGATCGTGCTCCTCGGACTCGCCGATGATGAASizeHit CountTotal NormTotal
No Reads
droTak1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATACCCAAATGGTGTGCGATATGATCGTGCTCCTCGGACTCGCCGATGATGAASizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCACCCAAGTGGTGGGCGATATGATCGTGCTCCTCGGACTCCCCGATGACGAASizeHit CountTotal NormTotal
No Reads
dm3
AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAGTTTCTTACCCAGATGATGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATCGTGCTCCTCGGACTCGCCGA.......2712.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................GATGGGCGATGTGATC...........................1611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATCGTGCTCCTCGGACTCGCCGAA......2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGATCGTGCTCCTCGGACTCGCCGA.......2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droSim2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCCAGATGATGAGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
No Reads
droSec2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCCAGATGATGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATAATGAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
No Reads
droYak3
AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTTGCTTACCCAGATGATGGGCGATGTGATCGTGCTCCTCGGACTCGCCAATGATGAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
No Reads
droEre2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACCCAGATGGTGGGCGATGTGATCGTGCTCCTCGGACTCGCCGATGATGAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads

Generated: 10/20/2015 at 10:22 PM