ID:

dps-mir-263b

 Coordinate:

XR_group6:3598049-3598139 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.3 -32.3 -32.3

Flybase annnotation

utr3 [utr3_minus_5839]; pre_miRNA [Dpse\mir-263b-RM]; miRNA [Dpse\miR-263b-RA]; utr5 [utr5_minus_6804]

No Repeatable elements found

Sense Strand Reads

TGTTTAGCTTAGTTTAGCTTAGTTTGAGACAACGACTACGGCGATCGTTATTGCTGGCATTGGCTCTTGGCACTGGGAGAATTCACAGTTGGTTTCCATATATTCTGTGGTTCTGCGGGTGCCAAAATCGAATGTTCGGCTCGAAACAGCAGCTGAAAAGTTTCAGCCTTAACAAATATATATGTTCATAT

**************************************************..(((((((((.....((((((((...(((((.(((((...((......))...))))))))))...)))))))).....)))).)))))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total V112

male body		 GSM444067

head

 SRR902012

CNS imaginal disc

 GSM343916

embryo

 M040

female body

 M059

embryo

 M062

head

 SRR902011

testis

 SRR902010

ovaries

 M022

male body
.................................................................CTTGGCACTGGGAGAATTCAC......................................................................................................... 21 0 1 5907.00 5907 2599 1158 1929 44 136 2 16 17 6 0
.................................................................CTTGGCACTGGGAGAATTCACA........................................................................................................ 22 0 1 4625.00 4625 1883 1104 1362 163 74 16 10 4 9 0
.................................................................CTTGGCACTGGGAGAATTCA.......................................................................................................... 20 0 1 4381.00 4381 2771 1169 205 20 209 1 1 5 0 0
.................................................................CTTGGCACTGGGAGAATTCACAG....................................................................................................... 23 0 1 3007.00 3007 1051 848 453 421 60 154 17 2 1 0
.................................................................CTTGGCACTGGGAGAATTC........................................................................................................... 19 0 1 1163.00 1163 714 329 31 7 71 1 8 0 0 2
.................................................................CTTGGCACTGGGAGAATT............................................................................................................ 18 0 1 53.00 53 11 30 3 0 9 0 0 0 0 0
..................................................................TTGGCACTGGGAGAATTCAC......................................................................................................... 20 0 1 49.00 49 19 9 8 1 11 0 0 1 0 0
.................................................................CTTGGCACTGGGAGAATTCACAGT...................................................................................................... 24 0 1 42.00 42 6 14 15 1 0 4 1 1 0 0
.................................................................CTTGGCACTGGGAGAATTT........................................................................................................... 19 1 1 41.00 41 29 8 0 0 4 0 0 0 0 0
..................................................................TTGGCACTGGGAGAATTCA.......................................................................................................... 19 0 1 40.00 40 17 5 0 0 18 0 0 0 0 0
..................................................................TTGGCACTGGGAGAATTCACA........................................................................................................ 21 0 1 37.00 37 13 7 4 2 11 0 0 0 0 0
..................................................................TTGGCACTGGGAGAATTCACAG....................................................................................................... 22 0 1 33.00 33 6 7 6 7 6 1 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCT.......................................................................................................... 20 1 1 32.00 32 26 2 0 0 4 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACAA....................................................................................................... 23 1 1 30.00 30 7 7 13 0 0 2 1 0 0 0
.................................................................CTTGGCACTGGGAGAATTCAA......................................................................................................... 21 1 1 26.00 26 7 13 4 0 2 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCACA........................................................................................................ 22 1 1 20.00 20 1 11 0 8 0 0 0 0 0 0
.................................................................CGTGGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 20.00 20 0 0 0 3 0 15 2 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACT........................................................................................................ 22 1 1 15.00 15 7 8 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCAC......................................................................................................... 21 1 1 15.00 15 0 13 0 1 1 0 0 0 0 0
.................................................................CTTGGCACTGGGAGGATTCACAG....................................................................................................... 23 1 1 14.00 14 0 5 0 9 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCACAG....................................................................................................... 23 1 1 13.00 13 0 3 0 9 0 1 0 0 0 0
.................................................................TTTGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 12.00 12 1 9 2 0 0 0 0 0 0 0
.................................................................CTCGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 12.00 12 3 6 2 0 0 0 1 0 0 0
..........................................................................................................GTGGTTCTGCGGGTGCCAAAAT............................................................... 22 0 1 12.00 12 1 0 1 0 2 8 0 0 0 0
.................................................................CTTGGCACTGGGAGGATTCA.......................................................................................................... 20 1 1 11.00 11 8 2 0 1 0 0 0 0 0 0
.................................................................TTTGGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 11.00 11 3 7 1 0 0 0 0 0 0 0
.................................................................ATTGGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 11.00 11 2 5 0 3 0 1 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACCG....................................................................................................... 23 1 1 11.00 11 2 6 0 3 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCA.......................................................................................................... 20 1 1 11.00 11 0 11 0 0 0 0 0 0 0 0
.................................................................CGTGGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 10.00 10 0 4 0 0 0 3 3 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACC........................................................................................................ 22 1 1 10.00 10 6 4 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACAC....................................................................................................... 23 1 1 10.00 10 1 4 0 1 0 3 0 1 0 0
.................................................................CTCGGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 9.00 9 0 3 0 0 1 4 1 0 0 0
..................................................................TTGGCACTGGGAGAATTC........................................................................................................... 18 0 1 9.00 9 5 2 0 0 2 0 0 0 0 0
.................................................................CTCGGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 9.00 9 4 5 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGGGAATTCAC......................................................................................................... 21 1 1 9.00 9 4 4 0 1 0 0 0 0 0 0
.................................................................ATTGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 9.00 9 1 8 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGGGAATTCACA........................................................................................................ 22 1 1 9.00 9 4 4 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGGATTCAC......................................................................................................... 21 1 1 8.00 8 1 6 1 0 0 0 0 0 0 0
.................................................................CTTAGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 8.00 8 2 4 1 1 0 0 0 0 0 0
.................................................................ATTGGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 8.00 8 1 7 0 0 0 0 0 0 0 0
.................................................................CTTGGCGCTGGGAGAATTCA.......................................................................................................... 20 1 1 8.00 8 7 1 0 0 0 0 0 0 0 0
.................................................................CTGGGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 8.00 8 1 7 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGACTTCAC......................................................................................................... 21 1 1 8.00 8 2 3 1 2 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACAT....................................................................................................... 23 1 1 7.00 7 1 5 1 0 0 0 0 0 0 0
.................................................................ATTGGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 7.00 7 1 5 1 0 0 0 0 0 0 0
.................................................................CTTGGCACCGGGAGAATTCA.......................................................................................................... 20 1 1 7.00 7 5 2 0 0 0 0 0 0 0 0
.................................................................TTTGGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 7.00 7 1 3 0 1 0 1 1 0 0 0
.................................................................CTAGGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 7.00 7 1 6 0 0 0 0 0 0 0 0
.................................................................CTTTGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 7.00 7 3 0 0 0 2 0 2 0 0 0
.................................................................CTTGGCACTGGGAGACTTCA.......................................................................................................... 20 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGCGAATTCA.......................................................................................................... 20 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0
.................................................................TTTGGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGCGAATTCAC......................................................................................................... 21 1 1 7.00 7 1 6 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCGC......................................................................................................... 21 1 1 7.00 7 3 2 2 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAAAATTCAC......................................................................................................... 21 1 1 7.00 7 3 1 0 1 1 0 1 0 0 0
.................................................................CTTGGCACTGGGGGAATTCA.......................................................................................................... 20 1 1 6.00 6 2 3 0 0 1 0 0 0 0 0
.................................................................CTTGGCACTGGGTGAATTCAC......................................................................................................... 21 1 1 6.00 6 0 6 0 0 0 0 0 0 0 0
..................................................................CTTGCACTGGGAGAATTCA.......................................................................................................... 19 2 1 6.00 6 4 0 0 0 2 0 0 0 0 0
.................................................................CTTGGCACTGGGTGAATTCA.......................................................................................................... 20 1 1 6.00 6 1 5 0 0 0 0 0 0 0 0
.................................................................CCTGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 6.00 6 2 3 1 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTAAC......................................................................................................... 21 1 1 6.00 6 3 2 0 0 1 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACAGA...................................................................................................... 24 1 1 6.00 6 1 1 2 0 1 0 1 0 0 0
.................................................................CTTTGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 6.00 6 4 0 0 0 0 1 1 0 0 0
.................................................................CTTGGCACTGGGAGAATTCGCA........................................................................................................ 22 1 1 6.00 6 1 2 2 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCC.......................................................................................................... 20 1 1 6.00 6 4 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCCC......................................................................................................... 21 1 1 6.00 6 1 5 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTAGGAGAATTCAC......................................................................................................... 21 1 1 6.00 6 0 6 0 0 0 0 0 0 0 0
.................................................................CTAGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 6.00 6 0 5 1 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATCCA.......................................................................................................... 20 1 1 6.00 6 5 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTATTCACA........................................................................................................ 22 1 1 5.00 5 0 4 0 1 0 0 0 0 0 0
.................................................................CGTGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 5.00 5 1 2 0 0 0 0 2 0 0 0
.................................................................CTTGGCACTGGCAGAATTCA.......................................................................................................... 20 1 1 5.00 5 3 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTATTCA.......................................................................................................... 20 1 1 5.00 5 0 4 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTC........................................................................................................... 19 1 1 5.00 5 0 5 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAGTTCA.......................................................................................................... 20 1 1 5.00 5 0 5 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGCGAGAATTCACA........................................................................................................ 22 1 1 5.00 5 1 4 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATCCACA........................................................................................................ 22 1 1 5.00 5 2 1 1 0 1 0 0 0 0 0
.................................................................CTTGGCACTGAGAGAATTCAC......................................................................................................... 21 1 1 5.00 5 1 4 0 0 0 0 0 0 0 0
.................................................................CTTGACACTGGGAGAATTCAC......................................................................................................... 21 1 1 5.00 5 1 2 1 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCG.......................................................................................................... 20 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTAACA........................................................................................................ 22 1 1 5.00 5 0 3 1 1 0 0 0 0 0 0
.................................................................CTTTGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 5.00 5 4 0 0 0 1 0 0 0 0 0
.................................................................CTAGGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 5.00 5 0 4 0 0 0 1 0 0 0 0
.................................................................CTTGGTACTGGGAGAATTCA.......................................................................................................... 20 1 1 4.00 4 1 2 0 0 1 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATGCACAG....................................................................................................... 23 1 1 4.00 4 0 3 0 1 0 0 0 0 0 0
.................................................................CTTGGCACCGGGAGAATTCACA........................................................................................................ 22 1 1 4.00 4 1 1 1 1 0 0 0 0 0 0
.................................................................CGTGGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATGCACA........................................................................................................ 22 1 1 4.00 4 0 3 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGAGAGAATTCACA........................................................................................................ 22 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAACTCACAG....................................................................................................... 23 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.................................................................CTTCGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 4.00 4 3 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGACTTCACA........................................................................................................ 22 1 1 4.00 4 2 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCGCAG....................................................................................................... 23 1 1 4.00 4 0 2 0 2 0 0 0 0 0 0
.................................................................CTTGGCACTAGGAGAATTCACA........................................................................................................ 22 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCAT......................................................................................................... 21 1 1 4.00 4 1 2 0 1 0 0 0 0 0 0
.................................................................CTCGGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTCGGAGAATTCACA........................................................................................................ 22 1 1 4.00 4 1 2 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGCGAATTCACA........................................................................................................ 22 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACTG....................................................................................................... 23 1 1 4.00 4 0 2 0 2 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTATTCACAG....................................................................................................... 23 1 1 4.00 4 0 0 0 4 0 0 0 0 0 0
.................................................................CTTGGCACTGGGCGAATTCACAG....................................................................................................... 23 1 1 4.00 4 0 1 0 2 0 0 1 0 0 0
.................................................................CTTAGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTAGGAGAATTCA.......................................................................................................... 20 1 1 4.00 4 0 3 0 0 0 0 0 0 1 0
.................................................................CTTGGCACTGGGAGAATTCATAG....................................................................................................... 23 1 1 4.00 4 1 2 0 1 0 0 0 0 0 0
.................................................................CTTGTCACTGGGAGAATTCACA........................................................................................................ 22 1 1 4.00 4 3 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATCCAC......................................................................................................... 21 1 1 4.00 4 2 1 0 0 0 0 0 1 0 0
.................................................................CTTGGCACTGGGACAATTCACAG....................................................................................................... 23 1 1 4.00 4 2 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACAAA...................................................................................................... 24 2 1 3.00 3 0 1 2 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATACACA........................................................................................................ 22 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0
..................................................................CTTGCACTGGGAGAATTCACAG....................................................................................................... 22 2 1 3.00 3 1 1 0 0 0 1 0 0 0 0
.................................................................CTTGGCGCTGGGAGAATTCACA........................................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGATTTCA.......................................................................................................... 20 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGCGAATTC........................................................................................................... 19 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAACTCA.......................................................................................................... 20 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATT............................................................................................................ 18 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTTACA........................................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTGGGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 3.00 3 0 2 0 1 0 0 0 0 0 0
.................................................................CTCGGCACTGGGAGAATTC........................................................................................................... 19 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCAATGGGAGAATTCA.......................................................................................................... 20 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAGTTCACA........................................................................................................ 22 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTTGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 3.00 3 0 0 0 0 0 2 1 0 0 0
.................................................................CTGGGCACTGGGAGAATTC........................................................................................................... 19 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
..................................................................CTTGCACTGGGAGAATTCACA........................................................................................................ 21 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTAACAG....................................................................................................... 23 1 1 3.00 3 1 0 1 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGATAATTCACA........................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCATTGGGAGAATTCACA........................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGCGAGAATTCA.......................................................................................................... 20 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................ATTGGCACTGGGAGAATTC........................................................................................................... 19 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGAGAGAATTCACAG....................................................................................................... 23 1 1 3.00 3 1 1 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTAGGAGAATTCACAG....................................................................................................... 23 1 1 3.00 3 0 2 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCAAAG....................................................................................................... 23 1 1 3.00 3 0 1 0 2 0 0 0 0 0 0
.................................................................CTGGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCCCTGGGAGAATTCAC......................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGTAGAATTCACAG....................................................................................................... 23 1 1 3.00 3 1 1 0 0 0 1 0 0 0 0
.................................................................CTTGGCATTGGGAGAATTCA.......................................................................................................... 20 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTCGGAGAATTCA.......................................................................................................... 20 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCATA........................................................................................................ 22 1 1 3.00 3 1 0 0 2 0 0 0 0 0 0
.................................................................CTTGGCACTGGCAGAATTCACA........................................................................................................ 22 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTAGGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.................................................................CGTGGCACTGGGAGAATTC........................................................................................................... 19 1 1 3.00 3 2 0 0 0 0 0 1 0 0 0
.................................................................CATGGCACTGGGAGAATTCA.......................................................................................................... 20 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCCCA........................................................................................................ 22 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCCCAG....................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGGACTGGGAGAATTCACA........................................................................................................ 22 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGCGGATTCA.......................................................................................................... 20 2 1 3.00 3 0 2 0 1 0 0 0 0 0 0
.................................................................CTTGGCACCGGGAGAATTCACAG....................................................................................................... 23 1 1 3.00 3 1 1 0 0 0 1 0 0 0 0
.................................................................CTTAGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0
.................................................................CTTGACACTGGGAGAATTCACAG....................................................................................................... 23 1 1 3.00 3 1 0 1 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAACTCAC......................................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
..................................................................CTTGCACTGGGAGAATTCAC......................................................................................................... 20 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTTAC......................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGAGAGAATTCA.......................................................................................................... 20 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGCAGAATTCAC......................................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCAAA........................................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGGATTCACA........................................................................................................ 22 1 1 3.00 3 0 2 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACAGTT..................................................................................................... 25 0 1 3.00 3 1 1 0 0 1 0 0 0 0 0
.................................................................CTTGCCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 3.00 3 0 2 0 0 0 1 0 0 0 0
.................................................................CTTGGCACTGGGGGAATTCACAG....................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGTGAATTCACA........................................................................................................ 22 1 1 3.00 3 0 2 0 1 0 0 0 0 0 0
.................................................................CTTGGTACTGGGAGAATTC........................................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CGTGGCACTGGGTGAATTCA.......................................................................................................... 20 2 2 2.00 4 0 4 0 0 0 0 0 0 0 0
..................................................................CTGGCACTGGGAGAATTCAC......................................................................................................... 20 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
................................................................CCTTGGCACTGGGAGAATTCAC......................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAGTTCACAG....................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAAAATTCA.......................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTATTCAC......................................................................................................... 21 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0
.................................................................CATGGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 2.00 2 0 0 0 1 0 0 1 0 0 0
.................................................................CTTGGCGCTGGGAGAATTCAC......................................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................ATTGGCACTGGGAGCATTCA.......................................................................................................... 20 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAAGTCAC......................................................................................................... 21 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTTGGAGAATTCACA........................................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
...................................................................TGGCACTGGGAGAATTCAC......................................................................................................... 19 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.................................................................CGTGGCACTGGGAGAATTCAT......................................................................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACGGG...................................................................................................... 24 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0
.................................................................CTAGGCACTGGGAGAATTC........................................................................................................... 19 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CGTTGCACTGGGAGAATTCACAG....................................................................................................... 23 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0
.................................................................CTTGGCACTGGGATAATTCA.......................................................................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGTGAGAATTCA.......................................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCACTG....................................................................................................... 23 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGATTTC........................................................................................................... 19 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATACAC......................................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACGGGGAGAATTCACA........................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGTACTGGGAGAATTCACAG....................................................................................................... 23 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0
.................................................................CTTGGCAGTGGGAGAATTCA.......................................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
................................................................CCTTGGCACTGGGAGAATTCACA........................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTTA.......................................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
................................................................ACTTGGCACTGGGAGAATTCACA........................................................................................................ 23 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0
..........................................................................................................GTGGTTCTGCGGGTGCCAAAA................................................................ 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.................................................................CTTGTCACTGGGAGAATTCAC......................................................................................................... 21 1 1 2.00 2 1 0 0 0 0 0 1 0 0 0
.................................................................CTGGGCACTGGGAGAATTCACAG....................................................................................................... 23 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0
..........................................................................................................GGGGTTCTGCGGGTGCCAAAAT............................................................... 22 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0
.................................................................CTTGTCACTGGGAGAATTCA.......................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCTCTGGGAGAATTCACA........................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGTGAATTC........................................................................................................... 19 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACCGGGAGAATTCAC......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGACTTCACAG....................................................................................................... 23 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0
.................................................................CTTCGCACTGGGAGAATTCACA........................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGGGAATTC........................................................................................................... 19 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCAATGGGAGAATTCACA........................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGACAATTCACA........................................................................................................ 22 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGAAGAATTCACAG....................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTCGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0
.................................................................CTTGGCACTGGGAGACTTC........................................................................................................... 19 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGCAGAATTCACAG....................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGTAGAATTCAC......................................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCACT........................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCAATGGGAGAATTC........................................................................................................... 19 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
................................................................TCTTGGCACTGGGAGAATTCAC......................................................................................................... 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAACTC........................................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGATTTCAC......................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCACG........................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGAAGAATTCAC......................................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGTACTGGGAGAATTCACA........................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................TTTGGCACTGGGAGAATTC........................................................................................................... 19 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCTCTGGGGGAATTCA.......................................................................................................... 20 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGAACTGGGAGAATTCAA......................................................................................................... 21 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATGCAC......................................................................................................... 21 2 1 2.00 2 0 1 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGCGAGAATTCAC......................................................................................................... 21 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCTCA........................................................................................................ 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.........................................................................................................TGTGGTTCTGCGGGTGCCAAAA................................................................ 22 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0
.................................................................CTTGGCGCTGGGAGAATTCACAG....................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGGAACTGGGAGAATTCAC......................................................................................................... 21 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..........................................................................................................GTGGTTCTGCGGGTGCCAAAAC............................................................... 22 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0
.................................................................CTTGGCACTGTGAGAATTCAC......................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTAA.......................................................................................................... 20 1 2 1.50 3 2 1 0 0 0 0 0 0 0 0
.................................................................CCTGGCACAGGGAGAATTCAC......................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CGTGGCACTGGGTGCATTCACAG....................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGCAGTATTCA.......................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGACAAGTCACAG....................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGTAGCATTCACA........................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGACAATTC........................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTGGAACTGGGACCATTCACA........................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................ATTGGCACTAGGAGAATTCAC......................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTGGGCACTGAGAGAATTCA.......................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................TTGGCACTGGGAGAATTT........................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................CTTGACTCTGGGAGAATTCTCA........................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGGATTCACG........................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGAACTGGGAGAATTCCCCG....................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCAGTGGGCGAATTTACAGTTG.................................................................................................... 26 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTAATCACAG....................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGCCACTGGGAGAATTCA.......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTTGGAGAATTCA.......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................TGGCACTGGGAGAATTCACAG....................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................CTTGGCACTCGGAGAATTCAC......................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGCGAGAATTCACAG....................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACCGGGAGAATTC........................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTCGGCCCTGGGAGAATTAACA........................................................................................................ 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGACCATTCACA........................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTAGCACTGGGAGAATTC........................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................TTATTGCTGGCATTGGCT.............................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTCGCACTCGGAGTATTCAC......................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................GGGGTTCTGCGGGTGCCAAAATT.............................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................ATTGGCACTGGGAGAATTCACAGA...................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCAAA........................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTCGGCACTTGCAGAATTCACAG....................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACAAGGAGAATTCACAA....................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGCAGAATTCACTG....................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................TTTGGCACTGGGAGATTTCACTG....................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CCTCGCACTGGGAGAATTCAC......................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTCTT......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTCGGAGCATTCACA........................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGACACTGGGAGAATTC........................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGATAATTCAC......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCCCTGGGAGCCTTCACAG....................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTTGGAGAATTTACA........................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................TTGGCACTGGGAGAATTCACAGT...................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................GTTGGCACTGGGAGAATTCAC......................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................TGTGGTTCTGCGGGTGCC.................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTATCCAC......................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................ATTGGCACTTGGAGAATTCACAG....................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTTGGAGAATTCACAG....................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCCCTGCCAGAATTCACA........................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCAATGGGAGTATTCA.......................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CATGGCACTCGGAGAATTCA.......................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCATTGGGAGAATTCAACGT...................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTGGGCACTGGGAGCATTCACAC....................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................TTGGCCCTGGGAGAATTCAG......................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................CACTGGGAGAATTCAC......................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATACACAG....................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAAGTCA.......................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................ACTTGGCACTGGGAGAATTCAC......................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................CTTAGCACTGGCAGAATTCACAG....................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTCGCACTGGGAGACTTCAC......................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTA........................................................................................................... 19 1 2 1.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................CTTGTCACTGGGAGAATTC........................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................GTGGTTCTGTGCGTACCAAAAT............................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCCTTCACA........................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGACACTGGGAGAATTCACA........................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCAATGGGAGGATTCACCG....................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGACACTGGGAGAATTCA.......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGCATTCACCG....................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................CTTGGCCCTGGGAGAATTCACAC....................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTATTGATAG....................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCAGTGGGAGAATGCACAG....................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................GTGGTTCTGCGGGTGCCA................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................CTTGGCAATGGGAGAAGTCA.......................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................GTGGTTCTGCGGGTGCCAAACT............................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................CTTGGCACTGGGAGTATGCAC......................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................ATTACCACTGGGAGAATTCAC......................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................CTTGGCACTGGGAGAATTAAACG....................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ACAAATCGAATCAAATCGAATCAAACTCTGTTGCTGATGCCGCTAGCAATAACGACCGTAACCGAGAACCGTGACCCTCTTAAGTGTCAACCAAAGGTATATAAGACACCAAGACGCCCACGGTTTTAGCTTACAAGCCGAGCTTTGTCGTCGACTTTTCAAAGTCGGAATTGTTTATATATACAAGTATA

************************************************..(((((((((.....((((((((...(((((.(((((...((......))...))))))))))...)))))))).....)))).)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body
............................................................TCAGAGAACCTTGACCCTCTT.............................................................................................................. 21 3 4 0.25 1 1
.............................GTTGCTGATCCCGCTACTAA.............................................................................................................................................. 20 3 10 0.10 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 XR_group6:3597999-3598189 - dps-mir-263b Known_mirbase TGTTTAGC-----------TTAGTTTAGCTTA-G----------------------TTTGAGACAAC--------------GACTACGGCGATCGTTATTGCTGGCATTGGCTCTTGGCACTGGGAGAATTCACAGTTGGTTTCCA--T-ATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATCGAATGTTCG-GCTCGAA--ACAGCAG------------CTG---AAAA---GTTTC-AGC-----------CTTAACAAATATATATGTTCATAT
droPer2 scaffold_9:1893996-1894188 - dpe-mir-263b Known_mirbase TGTTTAGC-----------TTAGTTTAGCTTA-G----------------------TTTGAGACAAC--------------GACTACGGCGATCGTTATTGCTGGCATTGGCTCTTGGCACTGGGAGAATTCACAGTTGGTTTTCA--T-ATATTCTGTGGTTCTGCGGGTGCC---------------------C-----------AAAATCGAATGTTCG-GCTCGAA--ACAGCAG------------CTG---AAAA---GTTTC-AGC------C----CTTAACAAATATGTATGTTCATAT
droWil2 scf2_1100000004540:1452428-1452569 + dwi-mir-263b Known_mirbase T---------------------------------------------------------------------------------------------------GCTCACAATGCATCTTGGCACTGGGAGAATTCACAGTTGATTCTTATTCGATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATCTAATGTTTGAGCTGTGA--TCATCGAAAAAGAAATCAAATG---AAAA---CTTTA-AAC-----------CGAAATA--------------AAT
droVir3 scaffold_13049:24412488-24412632 - dvi-mir-263b Known_mirbase TGTGTT----------------------CTT----------------------------------------------------CTACGGAAAGCAGAGCTACTGCCATTTCATCTTGGCACTGGGAGAATTCACAGTCGATTACA---TAATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATGTAATGTGTG-GACCAAG--ACAGC--------------CTG---AAA------------------------CTAAACAATTGTG---------TA
droMoj3 scaffold_6359:2971298-2971463 - TTGTTATTGTT--------------------------------------------------------------------------------------GTTGTTGTTGTTT-CACTTGCCGCCTGCTAAATTTGCATTTGTTTCAT---A--TGTTTTGTTG-----------ACAAATTTCGTTTTGCTTCTTTTCAAATGAGTTCGAAAGTGAAATTTTTG-T-TATTT--GCA---AAAACCAA-----AAC---AAAA---TTTTT-GTT------CATATTT--------------GTTTATAT
droGri2 scaffold_15110:24319762-24319903 - dgr-mir-263b Known_mirbase TATTG--TGGAAAG------------------------------------------------------------------------------------CTACTGCCATTACATCTTGGCACTGGGAGAATTCACAGTTGGTTATA---TAATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAACTGTAATGTGTG-GACATAGAAACAAC--------------CTG---AAAAA-CG----CA-------ACATATCA--------------AATAATTT
droAna3 scaffold_13337:11320696-11320836 + dan-mir-263b Known_mirbase TCTATAAA------TGAT----------------------------TTTTGTGATTTTTGAATCAAA--------------TATTCTGGA---C-TCTCTGCTGTCTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTGAAATAATG-GCCTAAA--AC--------------------------------------------------------------------------
droBip1 scf7180000396569:85699-85816 - TGATTT------------------------------------------GTGTGATTTTCAAAACGAA--------------TATTTTGGA---C-TTGCTGCTGTCTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTTT---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAA--------------------------------------------------------------------------------------------
droKik1 scf7180000302697:259351-259476 - TCTCTGAA---------------------------------------------------------------------------TCTTTGA---A-TCTTTGCCTTCTTTGAGCCTTGGCACTGGGAGAATTCACAGTTGATTTTC----AATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAGCAAAG-GCCATAG--ACATCAT------------CTT---AA------------------------------------------------A
droFic1 scf7180000454065:1467827-1467972 + TTTTTG------------------------------------------------------GT-------ACC------CAAGATCAAGGA---C----TGGCTGGCTGTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTCA---C--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTCACGTTTCA-GCTTTAA--ACAACAA------------AGGTTAAAA--A-------AA-------A----CTTCACA---------------AA
droEle1 scf7180000491000:1283038-1283230 - TATCTAGAGGTAAGCGATCCCAGGTGATCTTGTGCCTGG-----ATTTTTGTGTTTTCTGAA----A--------------GATCATGGC---C----ATGCTGACTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTCA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCGACG-GCTTTAA--ACAACAT------------TTC-TAAA----AG----CA-------AATTA----------------TATTAATAA
droRho1 scf7180000777749:22974-23168 + TATTAAGAGGTAAGCGATCTCAGGAGATCATCTCCCTAG-----ATTTTTGTGTTT-CTGGA-------ACC------CAAGATCAAG-----C----TAGCTGCCTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAACCGACA-GCTTTAA--ACAACAA------------TTTTA-AAA---AG----CA-------AAATA------------T-----ATAATAT
droBia1 scf7180000302334:535704-535838 + TGTGC-------------------------------------------------CC-GTGGA-------ACG------CTAGATCTTCAT---T----CAGCCGGCTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTCA---A--AACTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCCTCG-ACTCTGC--ACAACGA------------CTA---AA-----------------------------------------------AA
droTak1 scf7180000415815:88001-88180 - TACTTAGAGGTAAGTGATCTCAGGTGATCTTC-TACTGG-----AGTCTTGTGTTT-CTGTA-------ATC------CTTGATCATGAT---A----TAGCCGGCTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGATTTCA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCCACG-GCTCTAA--CCAACGA------------CCT---AA---------------------------------------------AAAT
droEug1 scf7180000408844:587120-587273 - TA----------AGCGATCTCAGCTGATCTTG-GCTAAG-----AATTTTGTGTTTTTAGGA-------ACCAGA------GAG---------C----ATGCTGACTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTCA---T--TAGTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAAGCTACA-GCTATAA--GCAAC-----------------------------------------------------------------------
dm3 chr3L:15836469-15836652 - dme-mir-263b Known_mirbase TATCTAAAGGTAAGCGATCTCAGGTGATCCA----------------------------------GCGATCCAGAGCTGTAGCTCTTCAA---T----TTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAAAACCG-GCTTTGT--ACAACGA------------TTTCTAAGC--C-ATTAC-AAT-----------TTGAACA---------------AA
droSim2 3l:15464208-15464403 - dsi-mir-263b Known_mirbase TATCTAAAGGTAAGCGATCCTAGGTGATCTTC-GCTTTTAAACT-----G---------------GCGATCCAGAGCTCTAGCTCTTCAA---T----TTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTGA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAAAACCG-GCTTTAT--ACAACAA------------ATTCTTAAC--A-ATTAC-AAT-----------TTA----------------AGCAA
droSec2 scaffold_0:7944352-7944560 - dse-mir-263b Known_mirbase TACCTAAAGGTAAGCGATCCTAGGTGATCTTC-GCTTTTAAACT-----G---------------GCGATCCAGAGCGCTAGCTCTTCAA---T----TTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTGA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAAAACCG-GCTTTAT--ACAACGA------------TTTCTAAAC--A-ATTAC-AATTTAAACAATATAA--------------AATTAGTA
droYak3 3L:18445391-18445558 - dya-mir-263b-1 Known_mirbase TATCTAAAGGTAAGCGATCTCAGGTGATCCCC-GCTTAGAAACT-----G---------------AGGATCCAGAACGATAGCTCTTCAA---T----CTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCAACG-GCTCTAT--ACAAC-----------------------------------------------------------------------
droEre2 scaffold_4784:18090146-18090311 - der-mir-263b Known_mirbase TATCCAAAGGTAAGCGATCTCAGGTGATCTCC-GCTTAGCCACT-----G---------------GCGATTCAAA--------------------CCATAGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGATTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCAACA-GCTCCAT--ACAACGA------------TAA---AA---------------------------------------------AATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGTTTAGC-----------TTAGTTTAGCTTA-G----------------------TTTGAGACAAC--------------GACTACGGCGATCGTTATTGCTGGCATTGGCTCTTGGCACTGGGAGAATTCACAGTTGGTTTCCA--T-ATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATCGAATGTTCG-GCTCGAA--ACAGCAG------------CTG---AAAA---GTTTC-AGC-----------CTTAACAAATATATATGTTCATATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................2115907.005907013621644115825996171929
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................2214625.004625074161016311041883941362
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................2014381.004381020911201169277105205
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................2313007.00300706015417421848105112453
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................1911163.0011632711873297140031
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................18153.0053090003011003
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................20149.0049011001919018
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................24142.0042004111460115
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................19141.004104000829000
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19140.0040018000517000
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................21137.0037011002713004
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................22133.00330610776006
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................20132.003204000226000
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................23130.003000210770013
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................21126.002602000137004
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................22115.00150000087000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAT................................................................................................22112.00120280001001
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................22110.00100000046000
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................23110.00100030141010
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................1819.0090200025000
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................2317.0070000051001
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................2416.0060101011002
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................2016.0060000024000
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................2015.0050000014000
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................2114.0040000121000
.................................................................................................................CTTGGCACTGGGAGAATTCACAAA...........................................................................................................................................................................2413.0030000010002
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTT..........................................................................................................................................................................2513.0030100011000
...................................................................................................................TGGCACTGGGAGAATTCAC..............................................................................................................................................................................1912.0020200000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................2112.0020000200000
................................................................................................................TCTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................2212.0020200000000
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................2212.0020000020000
............................................................................................................................................................TGTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................2212.0020020000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAC................................................................................................2212.0020020000000
..................................................................................................................TTGGCACTGGGAGAATTT................................................................................................................................................................................1811.0010100000000
...................................................................................................................TGGCACTGGGAGAATTCACAG............................................................................................................................................................................2111.0010100000000
...............................................................................................TTATTGCTGGCATTGGCT...................................................................................................................................................................................................1811.0010000100000
.................................................................................................................CTTGGCACTGGGAGAATTCTT..............................................................................................................................................................................2111.0010000001000
..................................................................................................................TTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................2311.0010000010000
............................................................................................................................................................TGTGGTTCTGCGGGTGCC---------------------------------.....................................................................................................1811.0010100000000
......................................................................................................................CACTGGGAGAATTCAC..............................................................................................................................................................................1611.0010000000001
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................1921.0020000020000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------A....................................................................................................1811.0010100000000
droPer2
TGTTTAGC-----------TTAGTTTAGCTTA-G----------------------TTTGAGACAAC--------------GACTACGGCGATCGTTATTGCTGGCATTGGCTCTTGGCACTGGGAGAATTCACAGTTGGTTTTCA--T-ATATTCTGTGGTTCTGCGGGTGCC---------------------C-----------AAAATCGAATGTTCG-GCTCGAA--ACAGCAG------------CTG---AAAA---GTTTC-AGC------C----CTTAACAAATATGTATGTTCATATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................2017464.007464041611035642699
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................2115895.0058951113011424076635
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................2212671.002671241089311299327
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................1912426.0024260013131829283
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................2312156.002156242180841802307
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................181165.00165002171397
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................21160.00600009474
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................19147.00470008354
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................20136.003600011223
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19134.00340105262
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................20133.00330003273
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................23128.002820110141
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................22123.00230005171
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................21121.00210002190
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................20119.00190001180
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................21117.0017000863
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................22116.0016004921
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................18113.00130001120
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................22113.00130002110
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................20112.0012000390
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................24111.0011001550
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................2416.006001230
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................2216.006000051
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................2315.005000221
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................1925.0010000190
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................2314.004000220
.................................................................................................................CTTGGCACTGGGAGAATTCTT..............................................................................................................................................................................2113.003000021
.................................................................................................................CTTGGCACTGGGAGAATTCAG..............................................................................................................................................................................2113.003010020
......................................................................................................................CACTGGGAGAATTCACAG............................................................................................................................................................................1813.003200100
..............................................................................................GTTATTGCTGGCATTGGCT...................................................................................................................................................................................................1912.002002000
droWil2
T---------------------------------------------------------------------------------------------------GCTCACAATGCATCTTGGCACTGGGAGAATTCACAGTTGATTCTTATTCGATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATCTAATGTTTGAGCTGTGA--TCATCGAAAAAGAAATCAAATG---AAAA---CTTTA-AAC-----------CGAAATA--------------AATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................23168864.006886485888004209525796
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................22125596.00255965653911834516231
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................21123686.00236864525650149121475
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................2019011.00901171417813066903
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................1917679.007679342444447155
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................221313.00313089175121
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................241309.00309014172132
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................231144.001440029646
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................211125.001250064673
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................201118.001180155107
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................211105.001050032100
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................20194.00940012082
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................24193.00930015042
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAT................................................................................................22190.00900107613
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................18187.00871222260
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................23177.00771111856
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................23164.00644022731
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................22150.0050023045
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................19141.0041013136
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................22137.0037002629
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19137.00370210223
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................18133.0033002031
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................22127.00271001115
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTT..........................................................................................................................................................................25122.0022000139
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................21120.0020000020
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................20117.0017001115
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................21117.0017000161
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................19215.5031002029
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................20115.0015003012
.................................................................................................................CTTGGCACTGGGAGAATTCAG..............................................................................................................................................................................21115.001500267
............................................................................................................................................................TGTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................22112.0012000120
...................................................................................................................TGGCACTGGGAGAATTCAC..............................................................................................................................................................................19110.0010000010
............................................................................................................................................................TGTGGTTCTGCGGGTGCC---------------------------------A....................................................................................................1919.00900081
.....................................................................................................................GCACTGGGAGAATTCACAG............................................................................................................................................................................1919.00900036
..................................................................................................................TTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................2318.00800044
...................................................................................................................TGGCACTGGGAGAATTCACAG............................................................................................................................................................................2117.00701015
......................................................................................................................CACTGGGAGAATTCACAG............................................................................................................................................................................1817.00731030
...................................................................................................................TGGCACTGGGAGAATTCACA.............................................................................................................................................................................2017.00701006
....................................................................................................................GGCACTGGGAGAATTCAC..............................................................................................................................................................................1816.00600006
.................................................................................................................CTTGGCACTGGGAGAATTCACAGC...........................................................................................................................................................................2415.00500050
.................................................................................................................CTTGGCACTGGGAGAATTCCAG.............................................................................................................................................................................2215.00500023
............................................................................................................................................................TGTGGTTCTGCGGGTGCC---------------------------------AAA..................................................................................................2114.00400031
....................................................................................................................GGCACTGGGAGAATTCACAG............................................................................................................................................................................2014.00400013
.....................................................................................................................GCACTGGGAGAATTCACA.............................................................................................................................................................................1814.00400031
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAA..................................................................................................2014.00400031
droVir3
TGTGTT----------------------CTT----------------------------------------------------CTACGGAAAGCAGAGCTACTGCCATTTCATCTTGGCACTGGGAGAATTCACAGTCGATTACA---TAATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATGTAATGTGTG-GACCAAG--ACAGC--------------CTG---AAA------------------------CTAAACAATTGTG---------TASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................20120306.002030666107001220300001134780445103316397651015631273010011684201150000110000000000000000000132544890801001000000001100
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................22117768.0017768133142150401011001190388771716001415756713981469000011818620090004020000000012340320021161881432568502200300000022217915
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................23116599.00165993043291060500080000223998764817841123967131760213311020252014352710791411000011122261613170015856191095145004336120200208490385139196
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................21113385.0013385192658301011600001602866572145918377197174214791210212168350801121300000000000100000464412171578008102000000037716
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................1914610.00461038641700130002000191132105210308176031428700020262306002011000000000000000000011136159900000000000000001
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................181289.002891160000000000011156122412026201000001000000000000000000000000000400736900000000000003211
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................221142.001420144000000000014651692071600000000100000000000000000101100001110131500000000000001841
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................191133.00133001200000000000104136301080000000000000000000000000000000000000205600000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................241132.001320000000000000026759940620000000000000010000000000000001000001181900001000000006503
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................211131.00131006000000000001646156605110000010000000000000000000000000000010114100000000000001010
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................191104.00104004000000000001444410770000000000000000000000000000000000000254300000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................21199.0099110000000000009115710708120000010100000100000000000000000000000101500000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................23199.0099000000000000101692126110111600000000002001000000000000000000000011700000000000002010
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................20187.008700410000000000108271050177000000000000000000000000000000000000061000000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................24182.008200100000000000888653146000001000000000000000000000000000011161000000000000004521
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................20181.0081002000000000002312210260000000000000000000000000000000000000223800000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................22155.005500000000000000631118205300000101000000000000000000000000000064400000000000000000
......................................................................................................................CACTGGGAGAATTCACAG............................................................................................................................................................................18153.005302010000000000000100000000000000000000000000000001435910012200000001000000001100
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................23149.004900000000000000230730076000000000000000000000000000000000000107400000000000000000
..................................................................................................................TTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................23133.00330003000000000032001002300000000000000000000000000011021000211200000000000004310
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................22132.003214000000000000211201000000000000000000000000000000000000000161300000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................20131.0031000000000000003100100310000000000000000000000000000000000000121000000000000000000
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................18130.003011400001000000021001020000000000000000000000000000000000000071000000000000000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAT................................................................................................22128.00280035000000000021042000200000000000000000000000000110200000041000000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................22128.00280000000000000022121003000000000000000000000000000000000000009800000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................20128.00280000000000000011024207200000000000000000000000000000000000006300000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................21127.00270000000000000022111414100000000000000000000000000000000000007300000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................23125.00250212000000000030012100300000000000000000000000000000000000035200000000000000000
................................................................................................................TCTTGGCACTGGGAGAATTCA...............................................................................................................................................................................21124.002400000000000000013120022000000000000000000000000000000000000031000000000000000000
................................................................................................................TCTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................23116.00160000000000000010300102000000100000000000000000000000000000000800000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTT..........................................................................................................................................................................25115.00150010000000000010210102100000001000000000000000000010000000001300000000000000000
................................................................................................................TCTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................22113.00130000000000000010120002500000000000000000000000000000000000001100000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................19212.002400000000000000011020020000000100000000000000000000000000000012500000000000000000
......................................................................................................................CACTGGGAGAATTCACA.............................................................................................................................................................................17111.00110000000000000000000000000000000000000000000000000000000005600000000000000000000
...................................................................................................................TGGCACTGGGAGAATTCACAG............................................................................................................................................................................2117.0070000000000000010101002100000000000000000000000000000000000010000000000000000000
...................................................................................................................TGGCACTGGGAGAATTCA...............................................................................................................................................................................1817.0070010000000000001111000000000000000000000000000000000000000000200000000000000000
....................................................................................................................GGCACTGGGAGAATTCACA.............................................................................................................................................................................1916.0060000000000000011012000100000000000000000000000000000000000000000000000000000000
........................................................................................................................CTGGGAGAATTCACAG............................................................................................................................................................................1616.0060000000000000000000000000000000000000000110000000000011000200000000000000000000
................................................................................................................TCTTGGCACTGGGAGAATTC................................................................................................................................................................................2016.0060000000000000010000000100000000000000000000000000000000000002200000000000000000
....................................................................................................................GGCACTGGGAGAATTCACAG............................................................................................................................................................................2015.0050000000000000000112000100000000000000000000000000000000000000000000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTTT...............................................................................................................................................................................2015.0050000000000000000000001000000000000000000000000000000000000003100000000000000000
...................................................................................................................TGGCACTGGGAGAATTCACA.............................................................................................................................................................................2015.0050010000000000000100001100000000000000000000000000000000000001000000000000000000
droMoj3
TTGTTATTGTT--------------------------------------------------------------------------------------GTTGTTGTTGTTT-CACTTGCCGCCTGCTAAATTTGCATTTGTTTCAT---A--TGTTTTGTTG-----------ACAAATTTCGTTTTGCTTCTTTTCAAATGAGTTCGAAAGTGAAATTTTTG-T-TATTT--GCA---AAAACCAA-----AAC---AAAA---TTTTT-GTT------CATATTT--------------GTTTATATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
No Reads
droGri2
TATTG--TGGAAAG------------------------------------------------------------------------------------CTACTGCCATTACATCTTGGCACTGGGAGAATTCACAGTTGGTTATA---TAATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAACTGTAATGTGTG-GACATAGAAACAAC--------------CTG---AAAAA-CG----CA-------ACATATCA--------------AATAATTTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................2211443.001443431400
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................201834.0083438796
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................231393.0039344349
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................211239.0023936203
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................19158.0058157
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19113.001358
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................21112.001257
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................2218.00871
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAACT................................................................................................2217.00770
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................2417.00716
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................2215.00514
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................2014.00431
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................2314.00404
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................2214.00404
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................1913.00312
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................2313.00303
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................2212.00202
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................2312.00202
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................2112.00211
...................................................................................................................TGGCACTGGGAGAATTCACAG............................................................................................................................................................................2112.00220
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................2412.00202
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAC.................................................................................................2111.00110
.................................................................................................................CTTGGCACTGGGAGAATTCACAAA...........................................................................................................................................................................2411.00101
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAACTT...............................................................................................2311.00110
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................1811.00110
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................2011.00101
..................................................................................................................TTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................2311.00110
..............................................................................................................................................................TGGTTCTGCGGGTGCC---------------------------------AAACT................................................................................................2111.00110
...................................................................................................................TGGCACTGGGAGAATTCACA.............................................................................................................................................................................2011.00110
............................................................................................................................................................TGTGGTTCTGCGGGTGCC---------------------------------AAACT................................................................................................2311.00110
................................................................................................................TCTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................2411.00110
....................................................................................................................GGCACTGGGAGAATTCAC..............................................................................................................................................................................1811.00110
...................................................................................................................TGGCACTGGGAGAATTCA...............................................................................................................................................................................1811.00101
droAna3
TCTATAAA------TGAT----------------------------TTTTGTGATTTTTGAATCAAA--------------TATTCTGGA---C-TCTCTGCTGTCTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTGAAATAATG-GCCTAAA--AC--------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................21117321.00173217281888644615891
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................23115088.0015088112999762563513520
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................20112018.00120187907125919048769
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................22110883.001088384134383312338677
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................1916895.00689516004574176005
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................231238.0023800313231
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................201113.0011310016888
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................211110.001101008794
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................241103.001030015493
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................221101.0010111015183
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................19198.0098100171169
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................20191.009110004176
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................18189.008910038347
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................21174.00741001666
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19159.005910009931
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................18157.00571007247
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................22154.005400110340
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................21153.00537001540
.................................................................................................................CTTGGCACTGGGAGAATTCAG..............................................................................................................................................................................21152.00520000547
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................24144.00441002140
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................19134.00340003427
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................23129.00290000227
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAT................................................................................................22125.00252430016
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................22125.00250003022
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................23122.00220502114
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTT..........................................................................................................................................................................25115.00150101211
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................20113.00130001012
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................22112.0012000318
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................2018.008000215
.................................................................................................................CTTGGCACTGGGAGAATTTT...............................................................................................................................................................................2017.007000115
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................2116.006110004
.................................................................................................................CTTGGCACTGGGAGAATTCACTT............................................................................................................................................................................2315.005000005
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------A....................................................................................................1815.005400001
......................................................................................................................CACTGGGAGAATTCACAG............................................................................................................................................................................1814.004200002
...................................................................................................................TGGCACTGGGAGAATTCAC..............................................................................................................................................................................1914.004000004
.................................................................................................................CTTGGCACTGGGAGAATTG................................................................................................................................................................................1914.004000013
...................................................................................................................TGGCACTGGGAGAATTCACA.............................................................................................................................................................................2014.004200011
droBip1
TGATTT------------------------------------------GTGTGATTTTCAAAACGAA--------------TATTTTGGA---C-TTGCTGCTGTCTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTTT---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAA--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCTCTGAA---------------------------------------------------------------------------TCTTTGA---A-TCTTTGCCTTCTTTGAGCCTTGGCACTGGGAGAATTCACAGTTGATTTTC----AATATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAGCAAAG-GCCATAG--ACATCAT------------CTT---AA------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
TTTTTG------------------------------------------------------GT-------ACC------CAAGATCAAGGA---C----TGGCTGGCTGTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTCA---C--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTCACGTTTCA-GCTTTAA--ACAACAA------------AGGTTAAAA--A-------AA-------A----CTTCACA---------------AASizeHit CountTotal NormTotal
No Reads
droEle1
TATCTAGAGGTAAGCGATCCCAGGTGATCTTGTGCCTGG-----ATTTTTGTGTTTTCTGAA----A--------------GATCATGGC---C----ATGCTGACTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTCA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCGACG-GCTTTAA--ACAACAT------------TTC-TAAA----AG----CA-------AATTA----------------TATTAATAASizeHit CountTotal NormTotal
No Reads
droRho1
TATTAAGAGGTAAGCGATCTCAGGAGATCATCTCCCTAG-----ATTTTTGTGTTT-CTGGA-------ACC------CAAGATCAAG-----C----TAGCTGCCTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAACCGACA-GCTTTAA--ACAACAA------------TTTTA-AAA---AG----CA-------AAATA------------T-----ATAATATSizeHit CountTotal NormTotal
No Reads
droBia1
TGTGC-------------------------------------------------CC-GTGGA-------ACG------CTAGATCTTCAT---T----CAGCCGGCTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTCA---A--AACTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCCTCG-ACTCTGC--ACAACGA------------CTA---AA-----------------------------------------------AASizeHit CountTotal NormTotal
No Reads
droTak1
TACTTAGAGGTAAGTGATCTCAGGTGATCTTC-TACTGG-----AGTCTTGTGTTT-CTGTA-------ATC------CTTGATCATGAT---A----TAGCCGGCTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGATTTCA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCCACG-GCTCTAA--CCAACGA------------CCT---AA---------------------------------------------AAATSizeHit CountTotal NormTotal
No Reads
droEug1
TA----------AGCGATCTCAGCTGATCTTG-GCTAAG-----AATTTTGTGTTTTTAGGA-------ACCAGA------GAG---------C----ATGCTGACTTTGAATCTTGGCACTGGGAGAATTCACAGTTGATTTCA---T--TAGTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAAGCTACA-GCTATAA--GCAAC-----------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TATCTAAAGGTAAGCGATCTCAGGTGATCCA----------------------------------GCGATCCAGAGCTGTAGCTCTTCAA---T----TTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAAAACCG-GCTTTGT--ACAACGA------------TTTCTAAGC--C-ATTAC-AAT-----------TTGAACA---------------AASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................201136070.00136070000045400002100010100001380512112853749144201000102010010100000065461800000000000000000000071603400021643131774497199204491018260040110231710467567119586028531651251373162280000000000002000011061000000000000050173722240102834287593305851417252031772500000926194271600022019000000000000000002204662111101122400055100263003751214570029178122627001021587100000000000000733335514218011030863171346125961068399938042497132037123452601884540097400270123100043253156567101393204327003207300010
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................211117603.00117603000051700320010300120001210949255969067711600100100101001001020008130110000000000000000000018264564011326431922448181141387456931544292211272229414173112449860125013742146228665415234000000010000390000217110300003000000025092648018372513458789657592918449839965710000012853753916000420210020012280000000081741100141041101514920011910018621302331278390025993632582001022801000000000100000105372853172700101856735659317845962226965232198661224518800361889721017212771190055210218812450351757852497369031502200200
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................23190481.0090481000015001152521400001000004005048511045054966600000100001000000010003210000000000000000000001201357248100023254517412628281551018037450010011116879407333017411053196121634725214400000010004443532100013900000000000003015011281092310454281618124551591458134425445650000076029411500080140000010100000000016182241362112100000000109310821128480170003353622288001001522000000000000000179862121151101104262426271865239917427267103951256901937422503045576812513171120011501001636250532434715195614181888200410
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................19163866.006386600000000000000000100001004006111521012200110000002000000000004310000000000000000000008000000042780049570011164100000110121021553501002515190551788570000000000000000000013000000020000000519975023331661241116395171376312010002116311600050300000000000000000001239011161020000030054011554017000260645123300000729000000000000000112260404010082736150721283598308626114113516249111716265401021403000000040287929827263344654415801549500000
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................22161024.0061024000022100216127000041000040201022564354693400010000100000000000002016900000000000000000000054435463510849299831722943826211913079516001327204225924762128105602393014941602122311700000000000180010100310001000100000111213291205098240122475416247026882118204945800007324203460001802400000000000100000217173324101927136100133110052642901244921500445227302750000010850000110000000001026321317525012072270277514721784143143211966314381410224624121033755032616145108921521169130512467594155611451387501210
.................................................................................................................CTTGGCACTGGGAGAATTCACATC...........................................................................................................................................................................24122154.00221540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187623392000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCAATC............................................................................................................................................................................2316295.00629500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482813000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................1812925.002925000000000000000000000000000140141302000000000000000000000012000000000000000000000010000000000100300000020000000000000701450102002359900000000000000000000000000000000000026122019017130145620767000001840000001010000000000000000000400000000000000000000530200084907000001600000000000000010000000000022131292113942164120000012805399000000000010000043879468131144000000
.................................................................................................................CTTGGCACTGGGAGAATTCATC.............................................................................................................................................................................2211225.00122500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000001046174000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAC................................................................................................2211152.0011520000000113900200000000000000010000000000000000000000000000100000000000000000000006111462337201163741171510837344020000102287210100000000000010000000000000000000000000000000000000020010011110000000002000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000100000000000
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................1911006.0010060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000020000000020100000000000000000000000000000000000001016020034041601000000040000000000000000000000000000000000000000000100000012000012501000002000000000000000000000000000029101236000005000013081100000000000000006270354026000000
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................211992.0099200002000000000000000000100000000000000000000000000000000000000000000000000000000000000000122011201001115000000000000001120301020501820000000000000000000000000000000000002929026001140605228410000011001000000200000000000000000000000010100000091003000101000520600000150000000000000001421000000000596658540130010000670405800001000000000007135107984100000
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................191682.0068200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000410103010601400000000000000000000000000000000000051907207505013012000000100000000000000000000000000000000000000000000000000028000021030000070000000000000000000001000000442431410202011200660274900010000000000002914542861315000000
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................201646.00646000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110031300009100000100000001110001000615300000000000000000000100000000000000020190100051011202033210000014000200000100000000000000000000000001100000000000101600006205000001200000000000000000000000000001937132804310000004803946000000000000000099927313167000000
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................201596.00596000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010040001000000000000000000003000000005131000000000000000000000000000000000000182007000000050700000010010000000000000000000000000000000000000000010000032200031301000002000000000000000000000000000016881200020400001307800000000000000003635660356000000
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................201542.0054200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005000000000000000000000232020200013216110000000000000000000000000000000000008901000100020200000000000000000000000000000000000000000000000000100000001800006601000002000000000000000000000000000093527001103000025103548000000000000000001022344000000
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................221523.00523000000000000000000000000000002850100000000000000000000000000000000000000000000000001000000000020000000000000000010004000000101013000000000000004000000000000000000000131709502729012221219000009000000000000000000000000000001100000000000010002500700002001000005000000000000000011000000000014177147346000001021024220000000000000000101051136715000000
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................191470.004700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100010110000000000000000000000000000000000007801000411011011000000000100000000000000000000000000000000000000001000000130000040300000200000000000000000000000000004341321600000200101401416000000000000000016187120344000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................241414.00414000000000000000000000000000000000000000000000000000000001000000000000000000000000001130000001002001020200000001023000520000000002000000000000010000000100000000000000088071003061219200000210000000000000000000000000000000000000000000100201400100001100000006000000000000000001000000000067775498300000080711000000000000000051121111777000000
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................211410.00410000040000000000000000000000000000000000000000000000000000000000000000000000000001000000000060000000111510000000000000600000100409100000000000000000000000000000000000013190160018011090180000006000000000000000000000000000000000000000000041001001200003207000001200000000000000000020000000001513121930320200002003134000000000000000055371040000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................231367.00367000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000010103412000000000000000000000000000000000000085030002010124000000100000000000000000000000000000000000000000001411900320100000420000000200000000000000001000000000001055436610000003048000000000000000065692626000000
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................221362.00362000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000010000001000000000000001510010202010013900000000000000000000100000000000000016601000000001000000001001000000000000000000000000000000000000000023100320016100023010000030000000000000000000000000000342704220000001240211700000000000000001930321000000
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................211351.00351000000000000000000000000000000980000000000000000000000000000000000000000000000000000200000100040100000000000000110006200020102100000000000000000000000000000000000000440810380901101240000010100000000000000000000000000000000000000000000001301700000201000001000000000000000000020000000007939152301010230014190000000000000000363164448000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................241344.00344000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000010000000000000000000100002000000100000000000000000000000000000000000000000480131129010701300000020000000000000000000000000000000000000000000502800420020000320200000400000000000000000000000000009891111062000010130510000000000000000036488542000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................231306.0030600002000140000000000000000000000000000000000000000000000000000000000000000000000020150000002006000030300000000000000410000010001300000000000000000000000000000000000081308000702071280000001301000010200000000000000000000000000100000026100004001000020020000020000000000000000000010000000132399141000000011099001100000000000023421222000000
.................................................................................................................CTTGGCACTGGGAGAATTCACTC............................................................................................................................................................................231289.00289000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000022462000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................181256.002560000000000000000000000000000011300000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020011000000000000000000000000000000000000002502001311040400000020000000001000000000000000000000000000000000000000015000010010000030000000000000000000000000000651119000000000014011600000000000000001197142265000000
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................201241.0024100001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001200000000000000110000000113100000000000000000000000000000000000071303000003080140000004000000000000000000000000000000000000000000000000003200005100000003000000000000000000000000000016129130011010000170516000000000000000004884344000000
.................................................................................................................CTTGGCACTGGGAGAATTCAG..............................................................................................................................................................................211195.001950000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000041000000000000000000000000300000000000000000000000000000000000008704000302012135000000100000000000000000000000000000000000000000000000110010000400000000700000000000000000000100000001016930002000000601017000000000000000021741000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................231192.0019200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000101000000000000000000000000000000000000068010002010100000000500000000000000000000000000010000000000000003380021012000022000000010000000000000000000000000000727102293100000013036000000000000000011831311000000
..................................................................................................................TTGGCACTGGGAGAATTCACATC...........................................................................................................................................................................231176.00176000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014333000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................221150.0015000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000500000000000010210000011002000000000000000000000000000000000000057050000010007000000000000000000000000000000000000000000000000006000310220000320200000400000000000000000000000000001254021300000040310000000000000000014231012000000
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................221143.001430000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000000020000100000300000000000000000000000000000000000005708000201020800000000000000000000000000000000000000000000000000000000002000010000000030000000000000000000000000000931702220000009067000000000000000023243212000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................211131.0013100000000200000000000000000000000000000000000000000000000100000000000000000000000000433700010111120010317000000000920000000000000030000000000000000000000000000000000000100010000004000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000010000000000000000000000000000000420000000000
droSim2
TATCTAAAGGTAAGCGATCCTAGGTGATCTTC-GCTTTTAAACT-----G---------------GCGATCCAGAGCTCTAGCTCTTCAA---T----TTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTGA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAAAACCG-GCTTTAT--ACAACAA------------ATTCTTAAC--A-ATTAC-AAT-----------TTA----------------AGCAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................2319641.0096416820474384728887299523162350200002
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................2214331.00433129830292159310919851244361003000
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................2112823.0028237014351531088153151592361722402000
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................201535.005351670497693891317662413000
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................191405.0040516531011915289911403011
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................181107.001075100138030131000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................24155.00551000001030170600000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................24143.004300001102161101200000
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................22135.0035010000112402600000
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................23123.0023100000021260200000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAC................................................................................................22114.001401021700000300000
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................23113.001300000000540400000
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................21112.001200000100610400000
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................20110.001040000100120200000
......................................................................................................................CACTGGGAGAATTCACAG............................................................................................................................................................................18110.001021500000200000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGC...........................................................................................................................................................................2417.00700000000500200000
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................2316.00610200000100200000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------A....................................................................................................1815.00520000200100000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAA..................................................................................................2015.00500000300000200000
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................2114.00410000000110100000
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................2214.00411000000010100000
.....................................................................................................................GCACTGGGAGAATTCACA.............................................................................................................................................................................1813.00300000000210000000
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................1913.00321000000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................2213.00310000000010100000
...................................................................................................................TGGCACTGGGAGAATTCAC..............................................................................................................................................................................1912.00200000200000000000
....................................................................................................................GGCACTGGGAGAATTCACAG............................................................................................................................................................................2012.00200200000000000000
.................................................................................................................CTTGGCACTGGGAGAATTCAG..............................................................................................................................................................................2112.00200000000020000000
...................................................................................................................TGGCACTGGGAGAATTCACA.............................................................................................................................................................................2012.00200000000110000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................2112.00200000000000101000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTA..........................................................................................................................................................................2512.00200000000000200000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AA...................................................................................................1912.00200000200000000000
.................................................................................................................CTTGGCACTGGGAGAAT..................................................................................................................................................................................1712.00200000000020000000
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................1912.00200000000020000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGAA..........................................................................................................................................................................2512.00200000000110000000
...................................................................................................................TGGCACTGGGAGAATT.................................................................................................................................................................................1611.00100000000010000000
......................................................................................................................CACTGGGAGAATTCACA.............................................................................................................................................................................1711.00100000001000000000
....................................................................................................................GGCACTGGGAGAATTCAC..............................................................................................................................................................................1811.00100000000001000000
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................2211.00100000000000100000
droSec2
TACCTAAAGGTAAGCGATCCTAGGTGATCTTC-GCTTTTAAACT-----G---------------GCGATCCAGAGCGCTAGCTCTTCAA---T----TTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTGA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAACTTAAAAACCG-GCTTTAT--ACAACGA------------TTTCTAAAC--A-ATTAC-AATTTAAACAATATAA--------------AATTAGTASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................20118329.001832916762338910301
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................23115116.00151166147985325099
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................22114114.00141149225665335316
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................2119069.0090691019515246584
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................1916278.00627811119205138
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................181275.002750242249
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................191171.001710490122
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................241121.00121059620
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................201121.00121039082
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................22191.00912104930
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................21189.00893123539
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19187.0087126060
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................24173.00730103924
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................19150.0050015035
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................20146.004628135
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................21144.0044015128
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................18139.003901038
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................22132.0032051611
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................23125.002503616
.................................................................................................................CTTGGCACTGGGAGAATTCACAGC...........................................................................................................................................................................24124.002401194
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................22123.002307115
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................20119.001909010
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................20115.001503210
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................22112.00120363
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................21111.00110308
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTT..........................................................................................................................................................................25110.00100073
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................23110.00100226
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------A....................................................................................................1818.0080008
.................................................................................................................CTTGGCACTGGGAGAATTG................................................................................................................................................................................1917.0070700
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................2316.0060024
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTA..........................................................................................................................................................................2515.0050032
.................................................................................................................CTTGGCACTGGGAGAATTTT...............................................................................................................................................................................2054.202101308
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAC................................................................................................2214.0043001
.................................................................................................................CTTGGCACTGGGAGAATTCAG..............................................................................................................................................................................2114.0040121
................................................................................................................TCTTGGCACTGGGAGAATTCA...............................................................................................................................................................................2114.0040004
.....................................................................................................................GCACTGGGAGAATTCACA.............................................................................................................................................................................1814.0040031
............................................................................................................................................................TGTGGTTCTGCGGGTGCC---------------------------------A....................................................................................................1913.0030012
.................................................................................................................CTTGGCACTGGGAGAATTCACAGAA..........................................................................................................................................................................2513.0030030
.................................................................................................................CTTGGCACTGGGAGAATTCATT.............................................................................................................................................................................2213.0030102
......................................................................................................................CACTGGGAGAATTCACAG............................................................................................................................................................................1813.0031011
..................................................................................................................TTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................2313.0030030
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................2112.0020011
.....................................................................................................................GCACTGGGAGAATTCACAG............................................................................................................................................................................1912.0020002
droYak3
TATCTAAAGGTAAGCGATCTCAGGTGATCCCC-GCTTAGAAACT-----G---------------AGGATCCAGAACGATAGCTCTTCAA---T----CTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCAACG-GCTCTAT--ACAAC-----------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................2021596.50319328719446125513921000
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................2321357.50271520275631305601396000010
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................212862.501725219219502016107300110
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................222613.001226133549225742176130000
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................192397.007942713011554021960000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................24221.50430127131010000
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................18220.50411100132320010
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAT................................................................................................22217.5035012770000000
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................22214.002806472090000
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19211.5023011001470000
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................20211.5023010041350000
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................21211.0022010021450000
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................2029.0018012010320000
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................2328.0016101400100000
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................2127.501511022270000
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................1927.501501002930000
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................2027.5015000021300000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................2426.001200461010000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................2124.50900450000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGC...........................................................................................................................................................................2423.50700610000000
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................2023.00600001410000
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................2222.50500021110000
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................2122.50500001400000
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................1922.50510000400000
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................2222.50500001040000
......................................................................................................................CACTGGGAGAATTCACAG............................................................................................................................................................................1822.00420110000000
..................................................................................................................TTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................2322.00400220000000
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................2221.50310010100000
...................................................................................................................TGGCACTGGGAGAATTCACAG............................................................................................................................................................................2121.50301200000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTT..........................................................................................................................................................................2521.50300120000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................2321.50300110010000
.................................................................................................................CTTGGCACTGGGAGAAT..................................................................................................................................................................................1721.00200000200000
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTA..........................................................................................................................................................................2521.00200110000000
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................2321.00200001010000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAATT...............................................................................................2321.00200110000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------A....................................................................................................1821.00202000000000
.......................................................................................CAA---T----CTGCTGACTTTGAGC...................................................................................................................................................................................................1921.00200200000000
..................................................................................................................TTGGCACTGGGAGAATTCACAGC...........................................................................................................................................................................2321.00200200000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAA..................................................................................................2021.00201010000000
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAC................................................................................................2221.00200200000000
...............................................................................................................................................................GGTTCTGCGGGTGCC---------------------------------AAAAT................................................................................................2020.50100100000000
droEre2
TATCCAAAGGTAAGCGATCTCAGGTGATCTCC-GCTTAGCCACT-----G---------------GCGATTCAAA--------------------CCATAGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGATTTTA---T--TATTCTGTGGTTCTGCGGGTGCC---------------------------------AAAATTTAATCAACA-GCTCCAT--ACAACGA------------TAA---AA---------------------------------------------AATTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.................................................................................................................CTTGGCACTGGGAGAATTCACAG............................................................................................................................................................................23121507.00215073713284520652065163630
.................................................................................................................CTTGGCACTGGGAGAATTCAC..............................................................................................................................................................................21119123.00191232248351852319157580
.................................................................................................................CTTGGCACTGGGAGAATTCA...............................................................................................................................................................................20115856.0015856260687475095100010
.................................................................................................................CTTGGCACTGGGAGAATTCACA.............................................................................................................................................................................22115054.001505431208075082250114380
.................................................................................................................CTTGGCACTGGGAGAATTC................................................................................................................................................................................1916373.006373201356165145790
.................................................................................................................CTTGGCACTGGGAGAATT.................................................................................................................................................................................181298.0029821130961860
.................................................................................................................CTTGGCACTGGGAGAATTCACAT............................................................................................................................................................................231261.002610052132320
.................................................................................................................CTTGGCACTGGGAGAATTCACAA............................................................................................................................................................................231175.00175008621590
.................................................................................................................CTTGGCACTGGGAGAATTCACAC............................................................................................................................................................................231167.00167031821530
..................................................................................................................TTGGCACTGGGAGAATTCACAG............................................................................................................................................................................221124.001244181413840
.................................................................................................................CTTGGCACTGGGAGAATTCAA..............................................................................................................................................................................211110.00110006012920
..................................................................................................................TTGGCACTGGGAGAATTCAC..............................................................................................................................................................................201108.00108207216810
..................................................................................................................TTGGCACTGGGAGAATTCA...............................................................................................................................................................................19185.0085007025530
.................................................................................................................CTTGGCACTGGGAGAATTT................................................................................................................................................................................19175.0075103027440
.................................................................................................................CTTGGCACTGGGAGAATTCACAGA...........................................................................................................................................................................24169.006910435560
..................................................................................................................TTGGCACTGGGAGAATTCACA.............................................................................................................................................................................21164.006420628460
.................................................................................................................CTTGGCACTGGGAGAATTCT...............................................................................................................................................................................20150.0050001014350
.................................................................................................................CTTGGCACTGGGAGAATTA................................................................................................................................................................................19142.004200205350
.................................................................................................................CTTGGCACTGGGAGAATTCACAGT...........................................................................................................................................................................24140.004000373270
.................................................................................................................CTTGGCACTGGGAGAATTCACT.............................................................................................................................................................................22137.003700214300
..................................................................................................................TTGGCACTGGGAGAATTC................................................................................................................................................................................18125.002500106180
.................................................................................................................CTTGGCACTGGGAGAATTCAT..............................................................................................................................................................................21122.002200103180
.................................................................................................................CTTGGCACTGGGAGAATTCACG.............................................................................................................................................................................22121.002100013170
.................................................................................................................CTTGGCACTGGGAGAATTCACC.............................................................................................................................................................................22120.00200174080
.................................................................................................................CTTGGCACTGGGAGAATTCC...............................................................................................................................................................................20116.001600402100
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAAT................................................................................................22115.00153304050
.................................................................................................................CTTGGCACTGGGAGAATTCG...............................................................................................................................................................................2028.501700104120
.................................................................................................................CTTGGCACTGGGAGAATTCACAGC...........................................................................................................................................................................2416.0060002130
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTT..........................................................................................................................................................................2516.0060100140
...................................................................................................................TGGCACTGGGAGAATTCACAG............................................................................................................................................................................2116.0060001050
.................................................................................................................CTTGGCACTGGGAGAATTCACAGG...........................................................................................................................................................................2415.0050000230
.............................................................................................................................................................GTGGTTCTGCGGGTGCC---------------------------------AAAA.................................................................................................2115.0050002030
.................................................................................................................CTTGGCACTGGGAGAATTCACCT............................................................................................................................................................................2315.0050005000
....................................................................................................................GGCACTGGGAGAATTCACAG............................................................................................................................................................................2014.0040010030
.................................................................................................................CTTGGCACTGGGAGAATTCACAGTA..........................................................................................................................................................................2514.0040011110
.................................................................................................................CTTGGCACTGGGAGAATTCAG..............................................................................................................................................................................2114.0040021010

Generated: 10/20/2015 at 10:31 PM