ID:

dps-mir-2574a

Coordinate:

Unknown_group_61:25363-25475 +

Confidence:

Known

Type:

Unknown

[View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-50.7

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. Unknown_group_61:9930-9952 +
  2. Unknown_group_61:25395-25417 +
star
  1. Unknown_group_93:18192-18213 -
  2. Unknown_group_61:9966-9987 +
  3. Unknown_group_61:25431-25452 +
  4. Unknown_singleton_1172:1169-1190 +

Sense Strand Reads

AGCCTCTCAGTGACCATCATTGCTCTTCAACTAGATGTCGTCCAGAATAGTGTGAATCTTTCTTCCAGGTTCTTCCAATTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTTAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTTATTTTTCTCCTTGA
*******************************************************************....((.(((((((((((.((((((((((((((((((((.........)))))))))))))))))))).))))))))))).)).....**********************************************************
Read size # Mismatch Hit Count Total Norm Total GSM444067
head
M062
head
M040
female body
SRR902012
CNS imaginal disc
M059
embryo
SRR902011
testis
SRR902010
ovaries
GSM343916
embryo
V112
male body
..................................................................................TGGACTCTCCATTTTGTATTGCG............................................................................................................ 23 0 2 25.00 50 23 7 11 6 2 0 1 0 0
..................................................................................TGGACTCTCCATTTTGTATTGC............................................................................................................. 22 0 2 13.50 27 1 21 1 2 1 1 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCAG......................................................................... 22 0 4 6.00 24 19 1 2 0 0 2 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTG.............................................................................................................. 21 0 2 2.00 4 2 0 2 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCAGA........................................................................ 23 0 4 2.00 8 3 1 0 0 2 0 0 1 1
......................................................................................................................CAATACAAAATGGAGAGACC........................................................................... 20 0 4 1.75 7 3 4 0 0 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATT............................................................................................................... 20 0 2 1.50 3 1 0 0 0 0 2 0 0 0
...................................................................................GGACTCTCCATTTTGTATTGCG............................................................................................................ 22 0 2 1.50 3 0 1 2 0 0 0 0 0 0
...................................................................................GGACTCTCCATTTTGTATTGC............................................................................................................. 21 0 2 1.50 3 0 2 1 0 0 0 0 0 0
.......................................................................................................................AATACAAAATGGAGAGACCAG......................................................................... 21 0 4 0.75 3 1 0 1 0 0 0 0 0 1
.......................................................................................................................AATACAAAATGGAGAGACCAGA........................................................................ 22 0 4 0.75 3 0 0 1 2 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGT.................................................................................................................. 17 0 2 0.50 1 0 0 0 1 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTGCC............................................................................................................ 23 1 2 0.50 1 0 1 0 0 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTGCTC........................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................................................GACTCTCCATTTTGTATTGCG............................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTGCGT........................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................AATACAAAATGGAGAGACCA.......................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCAGT........................................................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCGG......................................................................... 22 2 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCCG......................................................................... 22 2 4 0.25 1 0 0 0 0 0 0 0 1 0
......................................................................................................................CAATACAAAATGGAGAGACCAGC........................................................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGAC............................................................................ 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TCGGAGAGTCACTGGTAGTAACGAGAAGTTGATCTACAGCAGGTCTTATCACACTTAGAAAGAAGGTCCAAGAAGGTTAAAGACCTGAGAGGTAAAACATAACGCATATGTTGTTTGCGTTATGTTTTACCTCTCTGGTCTTTAACCACCATTATTCAATTGTTTACATGTATACATGCATACATAAACGAAAGAGAAATAAAAAGAGGAACT
**********************************************************....((.(((((((((((.((((((((((((((((((((.........)))))))))))))))))))).))))))))))).)).....*******************************************************************
Read size # Mismatch Hit Count Total Norm Total M062
head
V112
male body
M040
female body
.....................................................................................................................CGTTATGTTTTACCTCTCTGGT.......................................................................... 22 0 3 1.00 3 2 0 1
................................................................................AGACCTGAGAGGTAAAACATAA............................................................................................................... 22 0 2 0.50 1 0 1 0
mature
  1. Unknown_group_61:9930-9952 +
  2. Unknown_group_61:25395-25417 +
star
  1. Unknown_group_93:18192-18213 -
  2. Unknown_group_61:9966-9987 +
  3. Unknown_group_61:25431-25452 +
  4. Unknown_singleton_1172:1169-1190 +

Sense Strand Reads

AGCCTCTCAGTGACCATCATTGCTCTTCAACTAGATGTCGTCCAGAATAGTGTGAATCTTTCTTCCAGGTTCTTCCAATTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTTAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTTATTTTTCTCCTTGA
*******************************************************************....((.(((((((((((.((((((((((((((((((((.........)))))))))))))))))))).))))))))))).)).....**********************************************************
Read size # Mismatch Hit Count Total Norm Total GSM444067
head
M062
head
M040
female body
SRR902012
CNS imaginal disc
M059
embryo
SRR902011
testis
SRR902010
ovaries
GSM343916
embryo
V112
male body
..................................................................................TGGACTCTCCATTTTGTATTGCG............................................................................................................ 23 0 2 25.00 50 23 7 11 6 2 0 1 0 0
..................................................................................TGGACTCTCCATTTTGTATTGC............................................................................................................. 22 0 2 13.50 27 1 21 1 2 1 1 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCAG......................................................................... 22 0 4 6.00 24 19 1 2 0 0 2 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTG.............................................................................................................. 21 0 2 2.00 4 2 0 2 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCAGA........................................................................ 23 0 4 2.00 8 3 1 0 0 2 0 0 1 1
......................................................................................................................CAATACAAAATGGAGAGACC........................................................................... 20 0 4 1.75 7 3 4 0 0 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATT............................................................................................................... 20 0 2 1.50 3 1 0 0 0 0 2 0 0 0
...................................................................................GGACTCTCCATTTTGTATTGCG............................................................................................................ 22 0 2 1.50 3 0 1 2 0 0 0 0 0 0
...................................................................................GGACTCTCCATTTTGTATTGC............................................................................................................. 21 0 2 1.50 3 0 2 1 0 0 0 0 0 0
.......................................................................................................................AATACAAAATGGAGAGACCAG......................................................................... 21 0 4 0.75 3 1 0 1 0 0 0 0 0 1
.......................................................................................................................AATACAAAATGGAGAGACCAGA........................................................................ 22 0 4 0.75 3 0 0 1 2 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGT.................................................................................................................. 17 0 2 0.50 1 0 0 0 1 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTGCC............................................................................................................ 23 1 2 0.50 1 0 1 0 0 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTGCTC........................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................................................GACTCTCCATTTTGTATTGCG............................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................TGGACTCTCCATTTTGTATTGCGT........................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCAGT........................................................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................AATACAAAATGGAGAGACCA.......................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCCG......................................................................... 22 2 4 0.25 1 0 0 0 0 0 0 0 1 0
......................................................................................................................CAATACAAAATGGAGAGACCGG......................................................................... 22 2 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGAC............................................................................ 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0
......................................................................................................................CAATACAAAATGGAGAGACCAGC........................................................................ 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCGGAGAGTCACTGGTAGTAACGAGAAGTTGATCTACAGCAGGTCTTATCACACTTAGAAAGAAGGTCCAAGAAGGTTAAAGACCTGAGAGGTAAAACATAACGCATATGTTGTTTGCGTTATGTTTTACCTCTCTGGTCTTTAACCACCATTATTCAATTGTTTACATGTATACATGCATACATAAACGAAAGAGAAATAAAAAGAGGAACT
**********************************************************....((.(((((((((((.((((((((((((((((((((.........)))))))))))))))))))).))))))))))).)).....*******************************************************************
Read size # Mismatch Hit Count Total Norm Total M062
head
V112
male body
M040
female body
.....................................................................................................................CGTTATGTTTTACCTCTCTGGT.......................................................................... 22 0 3 1.00 3 2 0 1
................................................................................AGACCTGAGAGGTAAAACATAA............................................................................................................... 22 0 2 0.50 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_61:25313-25525 + dps-miR-2574a-3p AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATAGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTTAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGA
droPer2 scaffold_71:55761-55973 + AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATGGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTAAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGA
droWil2 scf2_1100000004511:9058626-9058696 + CTCTTCTCT---ACAGCCGCTCGC---GTCTCTGT-------------------AGATGTAAAGTTAAAAGGC---TTAAATCTTTCCTCTAGACTGTT--------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_9476:15374-15443 + AGGGTTG-C---GCGACTCGTTGTAGCCTGTCTTG-------------------TGATGCGGTCTCGAATGGC---GTGAATCGCTCCTCCAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:28300451-28300525 + AGACTATCA---GTGGTCTCCTCGATCTGATCAGC-------------------AGTGGCAAATTCATAGGGC---GTGAACCTGGCTTCTAGATGCTTC-------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13260:1426022-1426096 + AGGAATTCT---CCCACCATTTCGCATCAGCTCGG-------------------CGAAGCGGTCTGGAATGGC---TTGAAGCATTCTTCTAAATTGTTC-------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396621:116421-116542 + TGTGTTTCC---ACAAACATTCGA---TTTTCCAT-------------------CGGAGTTGGATCTAGCAGC---TTAAATCTGTTTTCCAGATTATCAGAAAAGATATCCGCCTTCT---------------------------------------------------------------------------------------------TGCCGGCGGACTCTTCTTCTAAGC--TGTATTG
droKik1 scf7180000301508:18980-19076 - TTTTTGGCT---GCGACAGCCTCGTTGTTTTTAGA-------------------GTTTGATGTCTGGAATGGA---GTAAATCGTTTTTCCAGGGTATCCGCAAAAACTTCTGCCCTATCT---------------------------------------------------------------------------------------------------------------------------A
droFic1 scf7180000453926:435168-435241 - AGAGACTCA---TTCACTCGCTGTACTCTGTTCGG-------------------GGATGCTGTCTTAAACGGC---TGGAATCTCTCCTCTAAATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490740:25726-25813 - ATAAAAAAT----------------------------------------------------AAATAAAAAGGCTGACGGAAATTTTT------------------------------------------------------------------------------------------------------ACAAGGGCACATATATACATATATGTGAACGAGCTCTTT-ACCGTTC--CATTTTG
droRho1 scf7180000760806:192-262 - AGTCGCATTTCCACAAGCATTCGA---TTTTCCAT-------------------CGGAGTTAAGTCCAGCGGC---TTGAATCTGTTTTCTAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409205:5001-5078 - AAACGCATTTGAACAAGCATTTGA---TTTTCAGT-------------------CGGAGCTAGGTTTAAGGGT---TTGAATCTGTCCTCTAGATTGTTTGAA----------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrU:5769325-5769387 - AGATTATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATCT
droSim2 2l:22766020-22766112 + AGGTATTCA---GCAACCAGTTGTACTCGTCTTGGATGCTGTCTCGAACGGCCGGAATGCTGTCTCGAACGGC---CGGAATCTTTTCTCAAGGTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_83:69291-69364 + AGGTATTCA---GCAACCAGTTGTACTCGTCTTGG-------------------CGATGCTGTCTCGAACGGC---CAGAATCTTTTCTCAAAGTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_6431:100-204 - AGAGACTGC---GAAACCAGACGACAGTGATTCGC-------------------ATCGGCAAATGCGAGCGGC---CTAAATCTTTGTTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT----------------Show Alignment With Reads

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_61:25313-25525 + dps-miR-2574a-3p AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATAGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTTAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGA
droPer2 scaffold_71:55761-55973 + AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATGGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTAAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGA
droWil2 scf2_1100000004511:9058626-9058696 + CTCTTCTCT---ACAGCCGCTCGC---GTCTCTGT-------------------AGATGTAAAGTTAAAAGGC---TTAAATCTTTCCTCTAGACTGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGT-------G
droEre2 scaffold_4784:23280955-23281064 - AGAGACTCC---GTAACCAAACGGCACTGATTCGC-------------------ATCGGCAAATGCGAGTGGC---TTAAATCTTTCCTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------GATGT--ACGGCA

Re-alignment of all predicted orthologs with sRNA reads

Generated: 11/04/2014 at 10:06 PM

Species Read alignment
dp5 ------------------------------------------------------------------------
AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATAGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTTAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...............................................................................................................TGGACTCTCCATTTTGTATTGCG...............................................................................................................23225.0050011270230106
...............................................................................................................TGGACTCTCCATTTTGTATTGC................................................................................................................22213.502701121010012
...................................................................................................................................................CAATACAAAATGGAGAGACCAG............................................................................2246.002402010190020
...............................................................................................................TGGACTCTCCATTTTGTATTG.................................................................................................................2122.0040200020000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGA...........................................................................2342.0080021131000
...................................................................................................................................................CAATACAAAATGGAGAGACC..............................................................................2041.7570004030000
...............................................................................................................TGGACTCTCCATTTTGTATT..................................................................................................................2021.5030000010020
................................................................................................................GGACTCTCCATTTTGTATTGCG...............................................................................................................2221.5030201000000
................................................................................................................GGACTCTCCATTTTGTATTGC................................................................................................................2121.5030102000000
....................................................................................................................................................AATACAAAATGGAGAGACCAG............................................................................2140.7530100011000
....................................................................................................................................................AATACAAAATGGAGAGACCAGA...........................................................................2240.753010000000
droVir3 scaffold_9476:15374-15443 + AGGGTTG-C---GCGACTCGTTGTAGCCTGTCTTG-------------------TGATGCGGTCTCGAATGGC---GTGAATCGCTCCTCCAGATT---------------------------------------------------------------------------------------------------------------------------------------td>2
...............................................................................................................TGGACTCTCCATTTTGT.....................................................................................................................1720.5010000000001
...............................................................................................................TGGACTCTCCATTTTGTATTGCC...............................................................................................................2320.5010001000000
...............................................................................................................TGGACTCTCCATTTTGTATTGCTC..............................................................................................................2420.5010000010000
.................................................................................................................GACTCTCCATTTTGTATTGCG...............................................................................................................2120.5010000010000
...............................................................................................................TGGACTCTCCATTTTGTATTGCGT..............................................................................................................2420.5010000010000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGT...........................................................................2340.2510000010000
....................................................................................................................................................AATACAAAATGGAGAGACCA.............................................................................2040.2510000010000
...................................................................................................................................................CAATACAAAATGGAGAGACCCG............................................................................2240.2510000100000
...................................................................................................................................................CAATACAAAATGGAGAGACCGG............................................................................2240.2510100000000
...................................................................................................................................................CAATACAAAATGGAGAGAC...............................................................................1940.2510001000000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGC...........................................................................2340.2510000010000
droPer2
AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATGGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTAAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...................................................................................................................................................CAATACAAAATGGAGAGACCAG............................................................................2251.407000520
...............................................................................................................TGGACTCTCCATTTTGTATTGCGT..............................................................................................................2431.003000210
...............................................................................................................TGGACTCTCCATTTTGTATTGCG...............................................................................................................2331.003000210
...............................................................................................................TGGACTCTCCATTTTGTATTGC................................................................................................................2230.331000100
...............................................................................................................TGGACTCTCCATTTTGTATTG.................................................................................................................2130.331010000
.....................................................................................................................................................ATACAAAATGGAGAGACCAGA...........................................................................2150.201001000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGT...........................................................................2350.201000010
....................................................................................................................................................AATACAAAATGGAGAGACCAG............................................................................2150.201000010
...................................................................................................................................................CAATACAAAATGGAGAGACCAGA...........................................................................2350.201000010
...................................................................................................................................................CAATACAAAATGGAGAGACCAC............................................................................2260.171000010
...................................................................................................................................................CAATACAAAATGGAGAGACCA.............................................................................2160.171000010
droWil2
CTCTTCTCT---ACAGCCGCTCGC---GTCTCTGT-------------------AGATGTAAAGTTAAAAGGC---TTAAATCTTTCCTCTAGACTGTT---------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:28300451-28300525 + AGACTATCA---GTGGTCTCCTCGATCTGATCAGC-------------------AGTGGCAAATTCATAGGGC---GTGAACCTGGCTTCTAGATGCTTC-------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13260:1426022-1426096 + AGGAATTCT---CCCACCATTTCGCATCAGCTCGG-------------------CGAAGCGGTCTGGAATGGC---TTGAAGCATTCTTCTAA-------------------------------SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.TCTTCTCT---ACAGCCGCTCGC---GTCTC.....................................................................................................................................................................................................................2532.00602130
........T---ACAGCCGCTCGC---GTCTCTGT-------------------AGATG..........................................................................................................................................................................................2621.50303000
...TTCTCT---ACAGCCGCTCGC---GTCTCTG...................................................................................................................................................................................................................2531.33404000
.............CAGCCGCTCGC---GTCTCTGT-------------------AGATG..........................................................................................................................................................................................2421.00201010
............................TCTCTGT-------------------AGATGTAAAGTTAAAAGGC---T........................................................................................................................................................................2721.00210100
........T---ACAGCCGCTCGC---GTCTCTGT-------------------AGA............................................................................................................................................................................................2421.00202000
................................TGT-------------------AGATGTAAAGTTAAAAGGC---TTAAA....................................................................................................................................................................2721.00200020
..................................................................AAAAGGC---TTAAATCTTTCCTCTAGAC......................................................................................................................................................2630.67202000
.................................................................TAAAAGGC---TTAAATCTTTCCTCTAGAC......................................................................................................................................................2730.67202000
...............GCCGCTCGC---GTCTCTGT-------------------AGATGTA........................................................................................................................................................................................2420.50101000
........T---ACAGCCGCTCGC---GTCTCTGT-------------------AGATGTT........................................................................................................................................................................................2820.50101000
......................................................................GGC---TTAAATCTTTCCTCTAGACTGTT--------------------------------------------------------------------------------------------------------------------------------------------------2620.50100010
.........................................................TGTAAAGTTAAAAGGC---TTAAATCTT................................................................................................................................................................2530.33101000
..........................................................GTAAAGTTAAAAGGC---TTAAATCTTT...............................................................................................................................................................2530.33101000
...TTCTCT---ACAGCCGCTCGC---GTCTC.....................................................................................................................................................................................................................2330.33100010
.............................................................................TAAATCTTTCCTCTAGACT.....................................................................................................................................................1930.33101000
....TCTCT---ACAGCCGCTCGC---GTCTCT....................................................................................................................................................................................................................2330.33100010
CTCTTCTCT---ACAGCCGCTCGC---GTCTC.....................................................................................................................................................................................................................2630.33100010
.................................................................TAAAAGGC---TTAAATCTTTCCTCTAGA.......................................................................................................................................................2630.33101000
...TTCTCT---ACAGCCGCTCGC---GTCTCT...................................tchAny">ATTGTTC-------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396621:116421-116542 + TGTGTTTCC---ACAAACATTCGA---TTTTCCAT-------------------CGGAGTTGGATCTAGCAGC---TTAAATCTGTTTTCCAGATTATCAGAAAAGATATCCGCCTTCT-------------------------------------2430.33100010
.........................................................TGTAAAGTTAAAAGGA---AA.......................................................................................................................................................................1860.17101000
droVir3 --------------------------------------------------------TGCCGGCGGACTCTTCTTCTAAGC--TGTATTG hAny">-----AAATAAAAAGGCTGACGGAAATTTTT------------------------------------------------------------------------------------------------------ACAAGGGCACATATATACATATATGTGAACGAGCTCTTT-ACCGTTC--CATTTTG
AGGGTTG-C---GCGACTCGTTGTAGCCTGTCTTG-------------------TGATGCGGTCTCGAATGGC---GTGAATCGCTCCTCCAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
..............................TCTTG-------------------TGATGCGGTCTCGAA................................................................................................................................................................................20534.80174001000311120020000000210016151026196177056515040000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................1969.675800001420202010000000700002106834303024120000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAT...............................................................................................................................................................................2113.00300000000000000000000000000100000100100000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATGGC---.........................................................................................................................................................................2413.00300001000000000000000000100010000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATGG.............................................................................................................................................................................2313.00300100000000010000000000000000000000001000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGACCG..............................................................................................................................................................................2262.331400003100010010000000300100100000000001110000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATGGC---G........................................................................................................................................................................2512.00200100000000000000000000000000000100000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGACC...............................................................................................................................................................................2161.831100000120000000000000400300000000010000000000000000000
droKik1 scf7180000301508:18980-19076 - TTTTTGGCT---GCGACAGCCTCGTTGTTTTTAGA-------------------GTTTGATGTCTGGAATGGA---GTAAATCGTTTTTCCAGGGTATCCGCAAAAACTTCTGCCCTATCT-------------------------------------------------------------------------------------------------------000000000
..............................TCTTG-------------------TGATGCGGTCTCG..................................................................................................................................................................................1861.831100001010001000000000200011000002000110000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGCAC...............................................................................................................................................................................2161.17700001000000000000000500000000000000000100000000000000000000000
................................TTG-------------------TGATGCGGTCTCGAATGGC---C........................................................................................................................................................................2311.00110000000000000000000000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATCGC---.........................................................................................................................................................................2411.00100000000000000000000000000000000000010000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATG..............................................................................................................................................................................2211.00100100000000000000000000000000000000000000000000000000000000000
............................TGTCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................2160.67400000100000000000000000001000000010010000000000000000000000000
........................AGCCTGTCTTG-------------------TGATGCGGTCTCG..................................................................................................................................................................................2460.50300000300000000000000000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAA...............................................................................................................................................................................2150.40200000000000000000000000010000000000010000000000000000000000000
................................TTG-------------------TGATGCGGTCTCGAA................................................................................................................................................................................1850.40200000000100000--------------------A
droFic1 scf7180000453926:435168-435241 - AGAGACTCA---TTCACTCGCTGTACTCTGTTCGG-------------------GGATGCTGTCTTAAACGGC---TGGAATCTCTCCTCTAAATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490740:25726-25813 - ATAAAAAAT-----------------------------------------------C................................................................................................................................................................................2060.33200000000000000000000000000000000020000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGCA................................................................................................................................................................................2060.33200000000000000000000000000000000000200000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAG...............................................................................................................................................................................2150.20100000000100000000000000000000000000000000000000000000000000000
............................TGTCTTG-------------------TGATGCGGTCTCGAAAA..............................................................................................................................................................................2450.20100001000000000000000000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAAGG.............................................................................................................................................................................2350.20100000000010000000000000000000000000000000000000000000000000000
......................GTAGCCTGTCTTG-------------------TGATGCGGTCTC...................................................................................................................................................................................25100.20200000000000010000000000000000000000001000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAAA..............................................................................................................................................................................2250.20100000000000000000000000000000000000010000000000000000000000000
......................GTAGCCTGTCTTG-------------------TGATGCGG.......................................................................................................................................................................................21100.20200000010000000000000000010000000000000000000000000000000000000
.......................TAGCCTGTCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................2660.17100000000000000000000000000000000100000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGGGC...............................................................................................................................................................................2160.17100000000000000000000100000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGATA...............................................................................................................................................................................2160.17100000000000000000000000000010000000000000000000000000000000000
.........................GCCTGTCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................2460.17100000000000000000000000000000000100000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGC.................................................................................................................................................................................1960.17100000100000000000000000000000000000000000000000000000000000000
....................TTGTAGCCTGTCTTG-------------------TGATGCGGTCT....................................................................................................................................................................................2670.14100000000000000000000000000000000000000100000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTTTA.................................................................................................................................................................................19100.10100000000
droRho1 scf7180000760806:192-262 - AGTCGCATTTCCACAAGCATTCGA---TTTTCCAT-------------------CGGAGTTAAGTCCAGCGGC---TTGAATCTGTTTTCTAGATT----------------------------------------------------AA..................................................................................................................................................................................18100.10100000000000000000000000000000000000001000000000000000000000000
.....................TGTAGCCTGTCTTG-------------------TGATGCG........................................................................................................................................................................................21100.10100000000000000000000000000100000000000000000000000000000000000
........................AGCCTGTCTTG-------------------TGATGCGGTCTC...................................................................................................................................................................................23100.10100000000000000000000000000001000000000000000000000000000000000
droMoj3
AGACTATCA---GTGGTCTCCTCGATCTGATCAGC-------------------AGTGGCAAATTCATAGGGC---GTGAACCTGGCTTCTAGATGCTTC-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..................TCCTCGATCTGATCAGC-------------------AGTGGCAAAT.....................................................................................................................................................................................2718.008400004
.........................TCTGATCAGC-------------------AGTGGCAAATTCATAGG..............................................................................................................................................................................2724.008800000
...............................................................TTCATAGGGC---GTGAACCTGGCTTCTAGC.......................................................................................................................................................2812.002000002
...............................................................TTCATAGGGC---GTGAACCTGGCTTCTAG........................................................................................................................................................2711.001100000
....TATCA---GTGGTCTCCTCGATCTGATC.....................................................................................................................................................................................................................2511.001100000
................................................................TCATAGGGC---GTGAACCTGGCTTCTAGA.......................................................................................................................................................2711.001000001
................TCTCCTCGATCTGATCAGC-------------------AGTGGCA........................................................................................................................................................................................2611.001000010
....................CTCGATCTGATCAGC-------------------AGTGGCA........................................................................................................................................................................................2211.001000010
..................TCCTCGATCTGATCAGC-------------------AGTGGCA........................................................................................................................................................................................2411.001100000
..................TCCTCGATCTGATCAGC-------------------AGTGGCAAATC....................................................................................................................................................................................2811.001100000
.............TGGTCTCCTCGATCTGATCAGC-------------------AG.............................................................................................................................................................................................2411.001100000
...............GTCTCCTCGATCTGATCAGC-------------------AGTGGCAAA......................................................................................................................................................................................2911.001000001
.....................TCGATCTGATCAGC-------------------AGTGGCAAATTC...................................................................................................................................................................................2631.003200001
.............TGGTCTCCTCGATCTGATCAGC-------------------AGT............................................................................................................................................................................................2511.001000001
................TCTCCTCGATCTGATCAGC-------------------AGTGGCAA.......................................................................................................................................................................................2711.001100000
.....................TCGATCTGATCAGC-------------------AGTGGCAAAT.....................................................................................................................................................................................2431.003200001
..................TCCTCGATCTGATCAGC-------------------AGTGGC.........................................................................................................................................................................................2311.001100000
.........................................................atchAny">-------------------------------------------------------------------------------------------------
droEug1 scf7180000409205:5001-5078 - AAACGCATTTGAACAAGCATTTGA---TTTTCAGT-------------------CGGAGCTAGGTTTAAGGGT---TTGAATCTGTCCTCTAGATTGTTTGAA-------------------------------------------------------------------------------------------------CC................................................................................................................................................................................2730.331100000
.....................TCGATCTGATCAGC-------------------AGTGGCAAATT....................................................................................................................................................................................2530.331100000
.......................GATCTGATCAGC-------------------AGTGGCAAATTCATAG...............................................................................................................................................................................2830.331100000
.........................TCTGATCAGC-------------------AGTGGCAAATTCATAGCG.............................................................................................................................................................................2830.331100000
.........................TCTGATCAGC-------------------AGTGGCAAATTCA..................................................................................................................................................................................2340.251000001
droAna3
AGGAATTCT---CCCACCATTTCGCATCAGCTCGG-------------------CGAAGCGGTCTGGAATGGC---TTGAAGCATTCTTCTAAATTGTTC------------------------------------------------------------------------------------------------------------------------------
dm3 chrU:5769325-5769387 - AGATTATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTG----------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
TGTGTTTCC---ACAAACATTCGA---TTTTCCAT-------------------CGGAGTTGGATCTAGCAGC---TTAAATCTGTTTTCCAGATTATCAGAAAAGATATCCGCCTTCT---------------------------------------------------------------------------------------------TGCCGGCGGACTCTTCTTCTAAGC--TGTATTGSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTGGCT---GCGACAGCCTCGTTGTTTTTAGA-------------------GTTTGATGTCTGGAATGGA---GTAAATCGTTTTTCCAGGGTATCCGCAAAAACTTCTGCCCTATCT---------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
AGAGACTCA---TTCACTCGCTGTACTCTGTTCGG-------------------GGATGCTGTCTTAAACGGC---TGGAATCTCTCCTCTAAATTTTT------------------ACTCTATCT
droSim2 2l:22766020-22766112 + AGGTATTCA---GCAACCAGTTGTACTCGTCTTGGATGCTGTCTCGAACGGCCGGAATGCTGTCTCGAACGGC---CGGAATCTTTTCTCAAGGTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_83:69291-69364 + AGGTATTCA---GCAACCAGTTGTACTCGTCTTGG-------------------CGATGCTGTCTCGAACGGC---CAGAATCTTTTCchAny">--------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATAAAAAAT----------------------------------------------------AAATAAAAAGGCTGACGGAAATTTTT----------------------------------------------------------TCAAAGTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_6431:100-204 - AGAGACTGC---GAAACCAGACGACAGTGATTCGC-------------------ATCGGCAAATGCGAGCGGC---CTAAATCTTTGTTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT------------------------------------------------------------ACAAGGGCACATATATACATATATGTGAACGAGCTCTTT-ACCGTTC--CATTTTGSizeHit CountTotal NormTotal
No Reads
droRho1
AGTCGCATTTCCACAAGCATTCGA---TTTTCCAT-------------------CGGAGTTAAGTCCAGCGGC---TTGAATCTGTTTTCTAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AAACGCATTTGAACAAGCATTTGA---TTTTCAGT-------------------CGGAGCTAGGTTTAAGGGT---TTGAATCTGTCCTCTAGATTGTTTGAA----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AGATTATGT---CGTTCAGTT------------------------------------------------------------------------------------------------GTTGT-------G
droEre2 scaffold_4784:23280955-23281064 - AGAGACTCC---GTAACCAAACGGCACTGATTCGC-------------------ATCGGCAAATGCGAGTGGC---TTAAATCTTTCCTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT-----------------------------------------------------------------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATCTSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR-----------------------------GATGT--ACGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATAGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTTAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...............................................................................................................TGGACTCTCCATTTTGTATTGCG...............................................................................................................23225.0050011270230106
...............................................................................................................TGGACTCTCCATTTTGTATTGC................................................................................................................22213.502701121010012
...................................................................................................................................................CAATACAAAATGGAGAGACCAG............................................................................2246.002402010190020
...............................................................................................................TGGACTCTCCATTTTGTATTG.................................................................................................................2122.0040200020000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGA...........................................................................2342.0080021131000
...................................................................................................................................................CAATACAAAATGGAGAGACC..............................................................................2041.7570004030000
...............................................................................................................TGGACTCTCCATTTTGTATT..................................................................................................................2021.5030000010020
................................................................................................................GGACTCTCCATTTTGTATTGCG...............................................................................................................2221.5030201000000
................................................................................................................GGACTCTCCATTTTGTATTGC................................................................................................................2121.5030102000000
....................................................................................................................................................AATACAAAATGGAGAGACCAG............................................................................2140.7530100011000
....................................................................................................................................................AATACAAAATGGAGAGACCAGA...........................................................................2240.753010000000S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................271655.0065500000010000000000000000000000000000000000000100000000000000000000000000000000000002010000000000000000000000100000000000000000000000000000000014110001620410001300000000000000000000000000000000000101000040000000000000000200038085323764134200000000000000000000000000000000000000000000000000000000000000000330000000011000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------....................................................................................................................242240.0048000000000000000000000000000000000000020000000001000000100000000000000000000000000002000000000000010000000000000100000000000000000000000000004023901021273404001100000000000000000000000000000000070101000000000000000000000100219010541132855400000000000000000000000000000000000000000000000000000000000000000231200000028000000000000000231100000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CA..................................................................................................................261198.00198000000010000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000010000000000000000000000000220001040000000000000000000000000000000000000000102000000000000000000000000000913036534280000000000000000000000000000000000000000000000000000000000000000000000000002
...............................................................................................................TGGACTCTCCATTTTGT.....................................................................................................................1720.5010000000001
...............................................................................................................TGGACTCTCCATTTTGTATTGCC...............................................................................................................2320.5010001000000
...............................................................................................................TGGACTCTCCATTTTGTATTGCTC..............................................................................................................2420.5010000010000
.................................................................................................................GACTCTCCATTTTGTATTGCG...............................................................................................................2120.5010000010000
...............................................................................................................TGGACTCTCCATTTTGTATTGCGT..............................................................................................................2420.5010000010000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGT...........................................................................2340.2510000010000
....................................................................................................................................................AATACAAAATGGAGAGACCA.............................................................................2040.2510000010000
...................................................................................................................................................CAATACAAAATGGAGAGACCCG............................................................................2240.2510000100000
...................................................................................................................................................CAATACAAAATGGAGAGACCGG............................................................................2240.2510100000000
...................................................................................................................................................CAATACAAAATGGAGAGAC...............................................................................1940.2510001000000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGC...........................................................................2340.2510000010000
droPer2
AGCCTCTCA---GTGACCATCATTGCTCTTCAACT-------------------AGATGTCGTCCAGAATGGT---GTGAATCTTTCTTCCAGGTTCTTCCAA----TTTCTGGACTCTCCATTTTGTATTGCGTATACAACAAACGCAATACAAAATGGAGAGACCAGAAATTGGTGGTAATAAGTAAACAAATGTACATATGTACGTATGTATTTGCTTTCTCTTT-ATTTTTC--TCCTTGASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...................................................................................................................................................CAATACAAAATGGAGAGACCAG............................................................................2251.407000520
...............................................................................................................TGGACTCTCCATTTTGTATTGCGT..............................................................................................................2431.003000210
...............................................................................................................TGGACTCTCCATTTTGTATTGCG...............................................................................................................2331.003000210
...............................................................................................................TGGACTCTCCATTTTGTATTGC............................................................................../td>011000000000000000100000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................251152.001520000000000000000000000000000000000000010000000000030000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000031200506200000000000000000000000000000000040100000000000500700000000000160140312826100000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------C...................................................................................................................252125.5025100000011000000000000000000000000000000000000000000000000000000000000000000000000004100000000001110000000000000000004000000000000000000000001093000450000000000000000000000000000000000000000000000000000000000000000000004221332832543000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................27168.006800000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000002000000000000000000000000000000000000001000000022305000000000000000002191515100000000000000000000000000000000000000000000000000000000000000000110000000030000000000000000000020000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............28167.0067000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301200000000000000000000000000000000000000001000000000000000000000000000005052161019000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATGCTTT......................................................................................................................................................................................25165.0065000000000000000000000000000000000000000000000000100030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232230.331000100
...............................................................................................................TGGACTCTCCATTTTGTATTG.................................................................................................................2130.331010000
.....................................................................................................................................................ATACAAAATGGAGAGACCAGA...........................................................................2150.201001000
...................................................................................................................................................CAATACAAAATGGAGAGACCAGT...........................................................................2350.201000010
....................................................................................................................................................AATACAAAATGGAGAGACCAG............................................................................2150.201000010
...................................................................................................................................................CAATACAAAATGGAGAGACCAGA...........................................................................2350.201000010
...................................................................................................................................................CAATACAAAATGGAGAGACCAC............................................................................2260.171000010
...................................................................................................................................................CAATACAAAATGGAGAGACCA.............................................................................2160.171000010
droWil2 -------------------------------
CTCTTCTCT---ACAGCCGCTCGC---GTCTCTGT-------------------AGATGTAAAGTTAAAAGGC---TTAAATCTTTCCTCTAGACTGTT-------------------------------------------------------------------------------------------------------------------03030220003500000000000000000000000000000000020100000031420200000000000000010101023000000000000000000000000000000000000000000000000000000000000000000010000000003100000000000000000010000
....TATGT---CGTTCAGTT--------------------------------AGCATGCTTT......................................................................................................................................................................................24163.0063000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001020820000000000000000000000000000000003020310200112030000000500000012050514100000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000001000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AAT........................................................................................................................................24162.00620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000010132800000000000000000000000000000000000000000000000000000000000000000006000000000000000000000SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.TCTTCTCT---ACAGCCGCTCGC---GTCTC.....................................................................................................................................................................................................................2532.00602130
........T---ACAGCCGCTCGC---GTCTCTGT-------------------AGATG..........................................................................................................................................................................................2621.50303000
...TTCTCT---ACAGCCGCTCGC---GTCTCTG...................................................................................................................................................................................................................2531.33404000
.............CAGCCGCTCGC---GTCTCTGT-------------------AGATG..........................................................................................................................................................................................2421.00201010
............................TCTCTGT-------------------AGATGTAAAGTTAAAAGGC---T........................................................................................................................................................................2721.00210100
........T---ACAGCCGCTCGC---GTCTCTGT-------------------AGA............................................................................................................................................................................................2421.00202000
................................TGT-------------------AGATGTAAAGTTAAAAGGC---TTAAA....................................................................................................................................................................2721.00200020
..................................................................AAAAGGC---TTAAATCTTTCCTCTAGAC......................................................................................................................................................2630.67202000
.................................................................TAAAAGGC---TTAAATCTTTCCTCTAGAC......................................................................................................................................................2730.67202000
...............GCCGCTCGC---GTCTCTGT-------------------AGATGTA........................................................................................................................................................................................2420.50101000
........T---ACAGCCGCTCGC---GTCTCTGT-------------------AGATGTT........................................................................................................................................................................................2820.50101000
......................................................................GGC---TTAAATCTTTCCTCTAGACTGTT--------------------------------------------------------------------------------------------------------------------------------------------------2620.50100010
.........................................................TGTAAAGTTAAAAGGC---TTAAATCTT................................................................................................................................................................2530.33101000
..........................................................GTAAAGTTAAAAGGC---TTAAATCTTT...............................................................................................................................................................2530.33101000
...TTCTCT---ACAGCCGCTCGC---GTCTC.....................................................................................................................................................................................................................2330.33100010
.............................................................................TAAATCTTTCCTCTAGACT.....................................................................................................................................................1930.33101000
....TCTCT---ACAGCCGCTCGC---GTCTCT....................................................................................................................................................................................................................2330.33100010
CTCTTCTCT---ACAGCCGCTCGC---GTCTC.....................................................................................................................................................................................................................2630.33100010
.................................................................TAAAAGGC---TTAAATCTTTCCTCTAGA.......................................................................................................................................................2630.33101000
...TTCTCT---ACAGCCGCTCGC---GTCTCT...................................td>00000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............21136.0036000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000001000000000000020000000000000000000001000000000000000000000000000040200000010000513800000000000000000000000000000000000000000000000020000000000000000000001000000100000000000001000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTC...................................................................................................................................26135.003500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGA........21135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017011900000000000000000000000000000000000000000000002000000000000000000000003000000000000000000000000100
...TTATGT---CGTTCAGTT--------------------------------AGCATG..........................................................................................................................................................................................21133.0033000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000220000000000000000000000000000000000000300100000000000000000200000000000000000000000000000000200000000000000000000001000400100000000000000000000000000000000000000000000006000000000000000150000000010000000000000000000000001
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................26130.0030000000000000000000000000000000000000000000001000000000000000000000000000000000000000000002430.33100010
.........................................................TGTAAAGTTAAAAGGA---AA.......................................................................................................................................................................1860.17101000
droVir3 embryo_2-4h0ATTCTTAGTC---------CAG.................................................................................................................
AGGGTTG-C---GCGACTCGTTGTAGCCTGTCTTG-------------------TGATGCGGTCTCGAATGGC---GTGAATCGCTCCTCCAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714td>000000000000000000000000000000000000000000000000000000010000000100160000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........T---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------............................................................................................................................................................21128.0028000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000500000001000000000000000000000000000000000000000000000000000000000000000000000000002110000000001000000000000000000000000000000000008000000000000000110000001010000000000000000000000001
..ATTATGT---CGTTCAGTT--------------------------------AGCAT...........................................................................................................................................................................................21128.002800000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001600000000SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
..............................TCTTG-------------------TGATGCGGTCTCGAA................................................................................................................................................................................20534.80174001000311120020000000210016151026196177056515040000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................1969.675800001420202010000000700002106834303024120000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAT...............................................................................................................................................................................2113.00300000000000000000000000000100000100100000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATGGC---.........................................................................................................................................................................2413.00300001000000000000000000100010000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATGG.............................................................................................................................................................................2313.00300100000000010000000000000000000000001000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGACCG..............................................................................................................................................................................2262.331400003100010010000000300100100000000001110000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATGGC---G........................................................................................................................................................................2512.00200100000000000000000000000000000100000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGACC...............................................................................................................................................................................2161.83110000012000000000000040030000000001000000000000000000000000000001000000000000000000010010100000000000000000000000000000000000000000000000003010000000000000010000001000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------...........................................................................................................................................26127.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000010208211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCT..................................................................................................................................27127.002700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100015110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................25125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000111022910000000000000000000000000000000000000000000000000000000000000000010310000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTT.......................................................................................................................................................................................21125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002120000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000010000001000111100000000000000000000000000000000000000000000000034010000000000000010000000000000200000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------C...........................................................................................................................................................24125.00250000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCG..................................................................................................................................................................................1861.831100001010001000000000200011000002000110000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGCAC...............................................................................................................................................................................2161.17700001000000000000000500000000000000000100000000000000000000000
................................TTG-------------------TGATGCGGTCTCGAATGGC---C........................................................................................................................................................................2311.00110000000000000000000000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATCGC---.........................................................................................................................................................................2411.00100000000000000000000000000000000000010000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAATG..............................................................................................................................................................................2211.00100100000000000000000000000000000000000000000000000000000000000
............................TGTCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................2160.67400000100000000000000000001000000010010000000000000000000000000
........................AGCCTGTCTTG-------------------TGATGCGGTCTCG..................................................................................................................................................................................2460.50300000300000000000000000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAA...............................................................................................................................................................................2150.40200000000000000000000000010000000000010000000000000000000000000
................................TTG-------------------TGATGCGGTCTCGAA................................................................................................................................................................................1850.402000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000060000000000000000000000000000000000000000000000000000000000000000010356000000000000000000000000000000000000000000000000000000000000000000110001000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGC.............................................................................................................................................................................................21125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000040000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000007020000000000000030000000000000000000000000000001011
....TATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------C...........................................................................................................................................................26123.002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................TGTCTTG-------------------TGATGCGGTCTCGAA................................................................................................................................................................................2250.40200000000000000000000100000001000000000000000000000000000000000
.......................TAGCCTGTCTTG-------------------TGATGCGGTCTCGAA................................................................................................................................................................................2750.40200000000000000000000000000010000000100000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAC................................................................................................................................................................................2060.33200000000000000000000000000000000020000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGCA................................................................................................................................................................................2060.33200000000000000000000000000000000000200000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAG...............................................................................................................................................................................2150.20100000000100000000000000000000000000000000000000000000000000000
............................TGTCTTG-------------------TGATGCGGTCTCGAAAA..............................................................................................................................................................................2450.20100001000000000000000000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGAAAGG.............................................................................................................................................................................2350.20100000000010000000000000000000000000000000000000000000000000000
......................GTAGCCTGTCTTG-------------------TGATGCGGTCTC...................................................................................................................................................................................25100.20200000000000010000000000000000000000001000000000000000000000000
..../td>0000000000000002000000000000000000000000000000000000000000000000010000000000000000040643000000000000000000000000000000000000000000000000000000000000000000010100000010000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATGCTT.......................................................................................................................................................................................24121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000400000000000000000000000000000000000000000000220010000000000000000030521000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATGC.........................................................................................................................................................................................21120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031040000000010000000000000301000000000000000000000000000000000000000000000002000000000000010010000000010000000000000000000000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATT.......................................................................................................................................25119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000004100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGTC---------....................................................................................................................21217.5035000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000230000030000000000000000000000000000000000000000000000000000200000010020407200000000000000000000000000000000000000000000011011000000000000000000000000000000000000000000000011
............................................................TTTC-------------------------CTT--------------AATT..........................TCTTG-------------------TGATGCGGTCTCGAAAA..............................................................................................................................................................................2250.20100000000000000000000000000000000000010000000000000000000000000
......................GTAGCCTGTCTTG-------------------TGATGCGG.......................................................................................................................................................................................21100.20200000010000000000000000010000000000000000000000000000000000000
.......................TAGCCTGTCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................2660.17100000000000000000000000000000000100000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGGGC...............................................................................................................................................................................2160.17100000000000000000000100000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGATA...............................................................................................................................................................................2160.17100000000000000000000000000010000000000000000000000000000000000
.........................GCCTGTCTTG-------------------TGATGCGGTCTCGA.................................................................................................................................................................................2460.17100000000000000000000000000000000100000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTCGC.................................................................................................................................................................................1960.17100000100000000000000000000000000000000000000000000000000000000
....................TTGTAGCCTGTCTTG-------------------TGATGCGGTCT....................................................................................................................................................................................2670.14100000000000000000000000000000000000000100000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTTTA.................................................................................................................................................................................19100.1010000000024117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000020020000000000000000000000000000000000000000000000000000000000000000030611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............29116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020922000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGC.............................................................................................................................................................................................18116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000211100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................23215.5031000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003100000030000000000000000000000000000000000000400000000000000000000000000170413000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
...............................................................C-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........25115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..............................TCTTG-------------------TGATGCGGTCTAA..................................................................................................................................................................................18100.10100000000000000000000000000000000000001000000000000000000000000
.....................TGTAGCCTGTCTTG-------------------TGATGCG........................................................................................................................................................................................21100.10100000000000000000000000000100000000000000000000000000000000000
........................AGCCTGTCTTG-------------------TGATGCGGTCTC...................................................................................................................................................................................23100.10100000000000000000000000000001000000000000000000000000000000000
droMoj3
AGACTATCA---GTGGTCTCCTCGATCTGATCAGC-------------------AGTGGCAAATTCATAGGGC---GTGAACCTGGCTTCTAGATGCTTC---------------------------------------------------------------------------------------------------0000010000000300000000000000000000020423000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------A..........................................................................................................................................21115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002050000000100000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............26114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000005043100000000000000000000000000000000000000000000000000000000000000----------------------------------------------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..................TCCTCGATCTGATCAGC-------------------AGTGGCAAAT.....................................................................................................................................................................................2718.008400004
.........................TCTGATCAGC-------------------AGTGGCAAATTCATAGG..............................................................................................................................................................................2724.008800000
...............................................................TTCATAGGGC---GTGAACCTGGCTTCTAGC.......................................................................................................................................................2812.002000002
...............................................................TTCATAGGGC---GTGAACCTGGCTTCTAG........................................................................................................................................................2711.001100000
....TATCA---GTGGTCTCCTCGATCTGATC.....................................................................................................................................................................................................................2511.001100000
................................................................TCATAGGGC---GTGAACCTGGCTTCTAGA.......................................................................................................................................................2711.001000001
................TCTCCTCGATCTGATCAGC-------------------AGTGGCA........................................................................................................................................................................................2611.001000010
....................CTCGATCTGATCAGC-------------------AGTGGCA........................................................................................................................................................................................2211.001000010
..................TCCTCGATCTGATCAGC-------------------AGTGGCA........................................................................................................................................................................................2411.001100000
..................TCCTCGATCTGATCAGC-------------------AGTGGCAAATC....................................................................................................................................................................................2811.001100000
.............TGGTCTCCTCGATCTGATCAGC-------------------AG.............................................................................................................................................................................................2411.001100000
...............GTCTCCTCGATCTGATCAGC-------------------AGTGGCAAA......................................................................................................................................................................................2911.001000001
.....................TCGATCTGATCAGC-------------------AGTGGCAAATTC...................................................................................................................................................................................2631.003200001
.............TGGTCTCCTCGATCTGATCAGC-------------------AGT............................................................................................................................................................................................2511.001000001
................TCTCCTCGATCTGATCAGC-------------------AGTGGCAA.......................................................................................................................................................................................2711.001100000
.....................TCGATCTGATCAGC-------------------AGTGGCAAAT.....................................................................................................................................................................................2431.003200001
..................TCCTCGATCTGATCAGC-------------------AGTGGC.........................................................................................................................................................................................2311.001100000
.........................................................td>0000000000000000000000000000000000000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTAT.....................................................................................................................................24114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCA............................................................................................................................................................................................19113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000020060000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............25113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000020424000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGCATGCTTT......................................................................................................................................................................................27113.0013000000000000000000000010000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110001000020000000000000000000000000000000000000000020000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATC.27113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000.............GGC---GTGAACCTGGCTTCTAGATG.....................................................................................................................................................2311.001100000
.....................TCGATCTGATCAGC-------------------AGTGGCAAATTCA..................................................................................................................................................................................2730.672200000
.............................ATCAGC-------------------AGTGGCAAATTCATAGGG.............................................................................................................................................................................2420.501000001
...............................CAGC-------------------AGTGGCAAATTCATAGGGC---G........................................................................................................................................................................2420.501000001
................................................................TCATAGGGC---GTGAACCTGGCTT............................................................................................................................................................2220.501100000
...........................TGATCAGC-------------------AGTGGCAAATTCATAGGG.............................................................................................................................................................................2620.501000001
.......................GATCTGATCAGC-------------------AGTGGCAAATTCACC................................................................................................................................................................................2730.331100000
.....................TCGATCTGATCAGC-------------------AGTGGCAAATT....................................................................................................................................................................................2530.331100000
.......................GATCTGATCAGC-------------------AGTGGCAAATTCATAG...............................................................................................................................................................................2830.331100000
.........................TCTGATCAGC-------------------AGTGGCAAATTCATAGCG.............................................................................................................................................................................2830.331100000
.........................TCTGATCAGC-------------------AGTGGCAAATTCA..................................................................................................................................................................................2340.251000001
droAna3
AGGAATTCT---CCCACCATTTCGCATCAGCTCGG-------------------CGAAGCGGTCTGGAATGGC---TTGAAGCATTCTTCTAAATTGTTC-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
TGTGTTTCC---ACAAACATTCGA---TTTTCCAT-------------------CGGAGTTGGATCTAGCAGC---TTAAATCTGTTTTCCAGATTATCAGAAAAGATATCCGCCTTCT---------------------------------------------------------------------------------------------TGCCGGCGGACTCTTCTTCTAAGC--TGTATTG0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTT......................................................................................................................................................................................22111.0011000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000001000000000000000000000000001000000000000000000000000
..............................................................TC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........26111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001050311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------AT...........27110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030403000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TC-------------------------CTT--------------AATTATTCTTAGTC---------CA..................................................................................................................21110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000003010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................T--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTC.....27110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000SizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTGGCT---GCGACAGCCTCGTTGTTTTTAGA-------------------GTTTGATGTCTGGAATGGA---GTAAATCGTTTTTCCAGGGTATCCGCAAAAACTTCTGCCCTATCT---------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
AGAGACTCA---TTCACTCGCTGTACTCTGTTCGG-------------------GGATGCTGTCTTAAACGGC---TGGAATCTCTCCTCTAAATTTTT--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1 --------------------------------------------ACAAGGGCACATATATACATATATGTGAACGAGCTCTTT-ACCGTTC--CATTTTG
ATAAAAAAT----------------------------------------------------AAATAAAAAGGCTGACGGAAATTTTT----------------------------------------------------------000001000000000000003000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000001000000000000000000000001
...........................................................................................T--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGA........2419.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000312000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------C...........................................................................................................................................................2718.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........T---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................2318.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000030001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTA...2518.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000010020000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATC.2418.00800000000000000000000000000SizeHit CountTotal NormTotal
No Reads
droRho1 ----------------------
AGTCGCATTTCCACAAGCATTCGA---TTTTCCAT-------------------CGGAGTTAAGTCCAGCGGC---TTGAATCTGTTTTCTAGATT-------------------------------------------------------------------------------------------------------------------------------0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACT......2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000400100000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------............................................................................................................................................................2518.00800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000SizeHit CountTotal NormTotal
No Reads
droEug1
AAACGCATTTGAACAAGCATTTGA---TTTTCAGT-------------------CGGAGCTAGGTTTAAGGGT---TTGAATCTGTCCTCTAGATTGTTTGAA----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3 td>0000>0TTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------AT...........2.50000<0<>0td> >>018<00
AGATTATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATCTSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
2317.007000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000020110000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................C-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2117.007000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGC.............................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000d>S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
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..........................................................................................................AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTC.....2618.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000010100000000td>00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTT.................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................2818.008000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCT........................................................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000010010000000000000100000000000001000000000000000001000
....TATGT---CGTTCAGTT--------------->00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGCATGC.........................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTA................................................................................................................................2622.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTAT..2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2912.0020000000000000000000000000000000000002317.007000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000020110000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................C-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2117.007000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGC.............................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000d>000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CATGCTTTC-------------------------CTT--------------AATTATTCT..................................................................................................................................2121.50300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------............................................................................................................................................................2617.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------AT...........2517.00700000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000<000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTT.................................................................................................................................2121.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
......................................................GCATGCTTTC-------------------------CTT--------------AATTATTC...................................................................................................................................2121.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TC-------------------------CTT--------------AATTATTCTTAGTC---------C...................................................................................................................2021.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................2421.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................TT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCT....................../td>0000000000000000000000000000000000000000030201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................2617.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------A..........................................................................................................................................2717.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010131000000000000000000000000000000000000000000000000000000002521.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------....................................................................................................................2321.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------C...................................................................................................................2621.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGCATGCTTTC-------------------------CTT--------------AATTATT....................................................................................................................................2121.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAG...............................................................................................................................2221.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTG.........2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000100
........T---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AAT........................................................................................................................................2717.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------............................................................................................................................................................2417.0070000000000000000000000000td>000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................2821.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTATGT---CGTTCAGTT--------------------------------AGCATGCT........................................................................................................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAC.......2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCAT...........................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------G..........................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------C............2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................C-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTG.........2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................T--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000010000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTATGT---CGTTCAGTT--------------------------------AGC.............................................................................................................................................................................................1916.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCT....2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATGCCC.......................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CA..................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
00000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------...........................................................................................................................................2816.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2816.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCAGT
..........................................................................................................AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAC.......2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTA-------------------------AA..........................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATT..........................................................................................................................................................................................2111.00100000000000000000000000000000000000000000000000000000000002216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000300000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............2716.00600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATT....................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACAT.....2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTAT.....................................................................................................................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000020000000000000000000000000000000000000000000000000000000000000001000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATGCT........................................................................................................................................................................................2316.00600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGCATGCTT.......................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAA.......000000000000000000000000420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTA...2616.006000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.GATTATGT---CGTTCAGTT--------------------------------AGCAT...........................................................................................................................................................................................2216.00600000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010003000000000000000000000000000000000000000000000000000000000000000000000000000000011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................ATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAT.......2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTTT......................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCG............................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GT---CGTTCAGTT--------------------------------AGCATGCTTT......................................................................................................................................................................................2115.005000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATCT2615.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000010000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGCAT...........................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------AT...........2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------...........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000>0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000110000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCAT...........................................................................................................................................................................................2015.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2815.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------....................................................................................................................2021.002000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTC...................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATC.2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------AT...........2615.0050000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCT....2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGCATGC.........................................................................................................................................................................................2515.005000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGCA............................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000011000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
....>000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTAT..2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTATGT---CGTTCAGTT--------------------------------AGCATG..........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000..TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AA.........................................................................................................................................2815.005000000000000000000000000000000000000000000000000000010000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTT.......................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGCATGCTT.......................................................................................................................................................................................2615.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAT.................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CC.......d>00000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000020000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............2615.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010210000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........T---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------...........................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000...................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................T--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------...........................................................................................................................................2711.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000<00000000000000000000000000000000000000000000010102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------C...................................................................................................................2124.509000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000102100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAA.................................................................................................................2714.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAG.................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------T............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000d>00000000000000000000000000000000000000000000000000000
............................................................................................................TTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTG.........2014.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTATGT---CGTTCAGTT--------------------------------AGCATGC.........................................................................................................................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........T---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AA.........................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTC.....2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGA........2511.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000<>000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTAT.....................................................................................................................................2614.004000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........T---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------C...........................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
droSim2
AGGTATTCA---GCAACCAGTTGTACTCGTCTTGGATGCTGTCTCGAACGGCCGGAATGCTGTCTCGAACGGC---CGGAATCTTTTCTCAAGGTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
..............AACCAGTTGTACTCGTCTTGGATGC..............................................................................................................................................................................................................2521.50300100000002000000
.....TTCA---GCAACCAGTTGTACTCGTCTTGG......................td>000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGCATG..........................................................................................................................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202721.00200000000020000000
...........................................TCGAACGGCCGGAATGCTGTCTCGAAC...............................................................................................................................................................................2720.50100000000001000000
...............................................................CTCGAACGGC---CGGAATCTTTTCTCA..........................................................................................................................................................2520.50100000000001000000
................................TGGATGCTGTCTCGAACG...................................................................................................................................................................................................1820.50100000000001000000
...............................TTGGATGCTGTCTCGAACG...................................................................................................................................................................................................1920.50100000000001000000
.........................................................TGCTGTCTCGAACGGC---CGGAATCTTT...............................................................................................................................................................2620.50100000000001000000
........A---GCAACCAGTTGTACTCGTCTTGGAGA...............................................................................................................................................................................................................2720.50100000001000000000
.................CAGTTGTACTCGTCTTGGAGA...............................................................................................................................................................................................................2120.50100000001000000000
.................CAGTTGTACTCGTCTTGGATGCTG............................................................................................................................................................................................................2420.50100000000001000000
............GCAACCAGTTGTACTCGTCTT....................................................................................................................................................................................................................2130.33100000001000000000
................CCAGTTGTACTCGTC......................................................................................................................................................................................................................1540.25100000000001000000
droSec2
AGGTATTCA---GCAACCAGTTGTACTCGTCTTGG-------------------CGATGCTGTCTCGAACGGC---CAGAATCTTTTCTCAAAGTTTCT------------------------------------------------<>011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................2023.507000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------............................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000/SPAN>--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
droYak3 .............................
AGAGACTGC---GAAACCAGACGACAGTGATTCGC-------------------ATCGGCAAATGCGAGCGGC---CTAAATCTTTGTTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT-------------------------------------------------------------00
........T---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AAA........................................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCT....2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGCAA...........................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000lass="mismatchAny">--------------------------------------GTTGT-------GSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
........................................................................................TCCAAGTTGCTTGCAAACACTTCTGC...................................................................................................................................2671.571101010000000
..............................TTCGC-------------------ATCGGCAAATGCGAGCGGC---C........................................................................................................................................................................2561.5090180000000
........................................................................................TCCAAGTTGCTTGCAAACACTTCTGCT..................................................................................................................................2770.7150410000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTGC...................................................................................................................................2570.7150410000000
.................................................................................TCTTTGTTCCAAGTTGCTTGCAAACACT........................................................................................................................................2860.3320110000000
.............................................................................TAAATCTTTGTTCCAAGTTGCTTGCA..............................................................................................................................................2660.3320200000000
...............................TCGC-------------------ATCGGCAAATGCGAGCGGC---CTA......................................................................................................................................................................2660.3320100001000
...................................................................................................TGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------GT...........2760.3320200000000
........................................................................................TCCAAGTTGCTTGCAAACACTTCTG....................................................................................................................................2570.2920110000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTGCTT.................................................................................................................................2770.2920200000000
...............................................................................................TGCTTGCAAACACTTCTGCTTTGTC---------C...................................................................................................................2670.2920200000000
...................................................................................................TGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------G............2680.2520200000000
...............................................................TGCGAGCGGC---CTAAATCTTTGTTCCAAG.......................................................................................................................................................2850.2010100000000
...............ACCAGACGACAGTGATTCGC-------------------ATCGGCAC.......................................................................................................................................................................................2850.2010010000000
...............................TCGC-------------------ATCGGCAAATGCGAGCGGC---C........................................................................................................................................................................2460.17100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000
..........................................................GCTTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................2223.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................C-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------AT...........2413.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTCGC-------------------ATCGGCAAATGCGAGCGGA---C........................................................................................................................................................................2560.1710010000000
...........................TGATTCGC-------------------ATCGGCAAATGCGAGC...............................................................................................................................................................................2460.1710100000000
...................................................................................TTTGTTCCAAGTTGCTTGCAAACACT........................................................................................................................................2660.1710010000000
.................................................................................TCTTTGTTCCAAGTTGCTTGCAAACA..........................................................................................................................................2660.1710100000000
..............................TTCGC-------------------ATCGGCAAATGCGAGCGGC---CTA......................................................................................................................................................................2760.1710100000000
.............................................................................TAAATCTTTGTTCCAAGTTGCTTGC...............................................................................................................................................2560.1710100000000
........................CAGTGATTCGC-------------------ATCGGCAAATGCGAGC...............................................................................................................................................................................2760.1710010000000
...............................TCGC-------------------ATCGGCAAATGCGAGCGGC---CT.......................................................................................................................................................................2560.1710100000000
.............................................................................TAAATCTTTGTTCCAAGTTGCTTGCAAA............................................................................................................................................2860.1710100000000
...................................................................................TTTGTTCCAAGTTGCTTGCAAACACC........................................................................................................................................2660.1710010000000
.............................................................................TAAATCTTTGTTCCAAGTTGCT..................................................................................................................................................2260.1710100000000
.......................................................TCGGCAAATGCGAGCGGC---CTAAATCT.................................................................................................................................................................2660.1710100000000
..............................................................................................TTGCTTGCAAACACTTCTGCTTTGTC---------....................................................................................................................2670.1410100000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTGCT..................................................................................................................................2670.1410100000000
...............................................................................................TGCTTGCAAACACTTCTGCTTTGTC---------....................................................................................................................2570.1410100000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTG....................................................................................................................................2470.1410010000000
..............................................................................................TTGCTTGCAAACACTTCTGCTTTGTC---------C...................................................................................................................2770.1410100000000
........................................................................................TCCAAGTTGCTTGCAAACACTTCTGCTT.................................................................................................................................2870.1410010000000
................................................................................................GCTTGCAAACACTTCTGCTTTGTC---------CTG.................................................................................................................2770.1410100000000
...........................................................................................AAGTTGCTTGCAAACACTTCTGC....................................................................................................../td>0000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTA......................................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCAA...........................................................................................................................................................................................2013.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002370.1410100000000
..................................................................................................TTGCAAACACTTCTGCTTTGTC---------CTG.................................................................................................................2570.1410100000000
..........................................................................................CAAGTTGCTTGCAAACACTTCTGC...................................................................................................................................2470.1410100000000
.....................................................................................................CAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------G............2480.1310100000000
...................................................................................................TGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------.............2580.1310100000000
droEre2
AGAGACTCC---GTAACCAAACGGCACTGATTCGC-------------------ATCGGCAAATGCGAGTGGC---TTAAATCTTTCCTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------GATGT--ACGGCASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
..............................TTCGC-------------------ATCGGCAAATGCGAGTGGC---TT.......................................................................................................................................................................2630.331100000
00000000000000000000000000000000000000000001000000000000000200000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTA................................................................................................................................2123.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTATGT---CGTTCAGTT--------------------------------AGCATGCTT.......................................................................................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AAT........................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTA...2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
............................................................................................................TTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATC.2813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTC.....2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGA........2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AAT........................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGA........2013.003000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATG..........................................................................................................................................................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000
..................................................................................................................TTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATCT2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGCATGCT........................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAT.................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATC.2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATGC.........................................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................CAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AA.........................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................2122.505000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAG...............................................................................................................................2822.505000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAG...............................................................................................................................2722.505000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------....................................................................................................................2522.505000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................GTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATT.......................................................................................................................................2132.337000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AAT........................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CA..................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTATCT2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTT.................................................................................................................................2522.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------C...................................................................................................................2722.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCT............................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AC.........................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTA................................................................................................................................2222.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................C-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAC.......2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGCATGCT........................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------C...........................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATGCTC.......................................................................................................................................................................................2312.002000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTC...................................................................................................................................2712.002000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTA...2712.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTT.................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GATTATGT---CGTTCAGTT--------------------------------AGCATGC.........................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTA................................................................................................................................2622.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTAT..2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CATGCTTTC-------------------------CTT--------------AATTATTCT..................................................................................................................................2121.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTT.................................................................................................................................2121.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
......................................................GCATGCTTTC-------------------------CTT--------------AATTATTC...................................................................................................................................2121.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TC-------------------------CTT--------------AATTATTCTTAGTC---------C...................................................................................................................2021.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................2421.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................TT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCT..................................................................................................................................2521.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------....................................................................................................................2321.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------C...................................................................................................................2621.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGCATGCTTTC-------------------------CTT--------------AATTATT....................................................................................................................................2121.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAG...............................................................................................................................2221.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................T--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTCTTAGT..............................................................................................................................2821.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTATGT---CGTTCAGTT--------------------------------AGCATGCT........................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------G..........................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------C............2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................C-------------------------CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTG.........2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................T--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCT....2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCATGCCC.......................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATGCTTTC-------------------------CTT--------------AATTATTCTTAGTC---------CA..................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAC.......2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTA-------------------------AA..........................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTATGT---CGTTCAGTT--------------------------------AGCATT..........................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATT....................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------A............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACAT.....2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGATTATGT---CGTTCAGTT--------------------------------AGCATGCTT.......................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAA.......1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................ATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGAT.......2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTTT......................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATGT---CGTTCAGTT--------------------------------AGCG............................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTA......................................................................................................................................2121.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CTT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------AT...........2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------...........................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTC-------------------------CTT--------------AATTATTCTTAGTC---------....................................................................................................................2021.002000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATT..........1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------AATTATTC...................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCT....2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCAGTT--------------------------------AGCATGCTTTC-------------------------CT..........................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTCTAT..2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTATGT---CGTTCAGTT--------------------------------AGCATG..........................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................CTT--------------AATTATTCTTAGTC---------CAG.................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTTC-------------------------CTT--------------AATTATTCTTAGTC---------CAT.................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CC..........................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................T--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------.............1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATGT---CGTTCAGTT--------------------------------AGCATGCTTTC-------------------------CTT--------------...........................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAG.................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------T............2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGACTC.....2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TT--------------AATTATTCTTAGTC---------CAGT---------------------------------------------------------------------------------------------------ATTGA........2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGGTATTCA---GCAACCAGTTGTACTCGTCTTGGATGCTGTCTCGAACGGCCGGAATGCTGTCTCGAACGGC---CGGAATCTTTTCTCAAGGTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
..............AACCAGTTGTACTCGTCTTGGATGC..............................................................................................................................................................................................................2521.50300100000002000000
.....TTCA---GCAACCAGTTGTACTCGTCTTGG..................................................................................................................................................................................................................2721.00200000000020000000
...........................................TCGAACGGCCGGAATGCTGTCTCGAAC...............................................................................................................................................................................2720.50100000000001000000
...............................................................CTCGAACGGC---CGGAATCTTTTCTCA..........................................................................................................................................................2520.50100000000001000000
................................TGGATGCTGTCTCGAACG...................................................................................................................................................................................................1820.50100000000001000000
...............................TTGGATGCTGTCTCGAACG...................................................................................................................................................................................................1920.50100000000001000000
.........................................................TGCTGTCTCGAACGGC---CGGAATCTTT...............................................................................................................................................................2620.50100000000001000000
........A---GCAACCAGTTGTACTCGTCTTGGAGA...............................................................................................................................................................................................................2720.50100000001000000000
.................CAGTTGTACTCGTCTTGGAGA...............................................................................................................................................................................................................2120.50100000001000000000
.................CAGTTGTACTCGTCTTGGATGCTG............................................................................................................................................................................................................2420.50100000000001000000
............GCAACCAGTTGTACTCGTCTT....................................................................................................................................................................................................................2130.33100000001000000000
................CCAGTTGTACTCGTC......................................................................................................................................................................................................................1540.25100000000001000000
droSec2
AGGTATTCA---GCAACCAGTTGTACTCGTCTTGG-------------------CGATGCTGTCTCGAACGGC---CAGAATCTTTTCTCAAAGTTTCT--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
droYak3
AGAGACTGC---GAAACCAGACGACAGTGATTCGC-------------------ATCGGCAAATGCGAGCGGC---CTAAATCTTTGTTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------GTTGT-------GSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
........................................................................................TCCAAGTTGCTTGCAAACACTTCTGC...................................................................................................................................2671.571101010000000
..............................TTCGC-------------------ATCGGCAAATGCGAGCGGC---C........................................................................................................................................................................2561.5090180000000
........................................................................................TCCAAGTTGCTTGCAAACACTTCTGCT..................................................................................................................................2770.7150410000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTGC...................................................................................................................................2570.7150410000000
.................................................................................TCTTTGTTCCAAGTTGCTTGCAAACACT........................................................................................................................................2860.3320110000000
.............................................................................TAAATCTTTGTTCCAAGTTGCTTGCA..............................................................................................................................................2660.3320200000000
...............................TCGC-------------------ATCGGCAAATGCGAGCGGC---CTA......................................................................................................................................................................2660.3320100001000
...................................................................................................TGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------GT...........2760.3320200000000
........................................................................................TCCAAGTTGCTTGCAAACACTTCTG....................................................................................................................................2570.2920110000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTGCTT.................................................................................................................................2770.2920200000000
...............................................................................................TGCTTGCAAACACTTCTGCTTTGTC---------C...................................................................................................................2670.2920200000000
...................................................................................................TGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------G............2680.2520200000000
...............................................................TGCGAGCGGC---CTAAATCTTTGTTCCAAG.......................................................................................................................................................2850.2010100000000
...............ACCAGACGACAGTGATTCGC-------------------ATCGGCAC.......................................................................................................................................................................................2850.2010010000000
...............................TCGC-------------------ATCGGCAAATGCGAGCGGC---C........................................................................................................................................................................2460.1710010000000
..............................TTCGC-------------------ATCGGCAAATGCGAGCGGA---C........................................................................................................................................................................2560.1710010000000
...........................TGATTCGC-------------------ATCGGCAAATGCGAGC...............................................................................................................................................................................2460.1710100000000
...................................................................................TTTGTTCCAAGTTGCTTGCAAACACT........................................................................................................................................2660.1710010000000
.................................................................................TCTTTGTTCCAAGTTGCTTGCAAACA..........................................................................................................................................2660.1710100000000
..............................TTCGC-------------------ATCGGCAAATGCGAGCGGC---CTA......................................................................................................................................................................2760.1710100000000
.............................................................................TAAATCTTTGTTCCAAGTTGCTTGC...............................................................................................................................................2560.1710100000000
........................CAGTGATTCGC-------------------ATCGGCAAATGCGAGC...............................................................................................................................................................................2760.1710010000000
...............................TCGC-------------------ATCGGCAAATGCGAGCGGC---CT.......................................................................................................................................................................2560.1710100000000
.............................................................................TAAATCTTTGTTCCAAGTTGCTTGCAAA............................................................................................................................................2860.1710100000000
...................................................................................TTTGTTCCAAGTTGCTTGCAAACACC........................................................................................................................................2660.1710010000000
.............................................................................TAAATCTTTGTTCCAAGTTGCT..................................................................................................................................................2260.1710100000000
.......................................................TCGGCAAATGCGAGCGGC---CTAAATCT.................................................................................................................................................................2660.1710100000000
..............................................................................................TTGCTTGCAAACACTTCTGCTTTGTC---------....................................................................................................................2670.1410100000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTGCT..................................................................................................................................2670.1410100000000
...............................................................................................TGCTTGCAAACACTTCTGCTTTGTC---------....................................................................................................................2570.1410100000000
.........................................................................................CCAAGTTGCTTGCAAACACTTCTG....................................................................................................................................2470.1410010000000
..............................................................................................TTGCTTGCAAACACTTCTGCTTTGTC---------C...................................................................................................................2770.1410100000000
........................................................................................TCCAAGTTGCTTGCAAACACTTCTGCTT.................................................................................................................................2870.1410010000000
................................................................................................GCTTGCAAACACTTCTGCTTTGTC---------CTG.................................................................................................................2770.1410100000000
...........................................................................................AAGTTGCTTGCAAACACTTCTGC...................................................................................................................................2370.1410100000000
..................................................................................................TTGCAAACACTTCTGCTTTGTC---------CTG.................................................................................................................2570.1410100000000
..........................................................................................CAAGTTGCTTGCAAACACTTCTGC...................................................................................................................................2470.1410100000000
.....................................................................................................CAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------G............2480.1310100000000
...................................................................................................TGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------.............2580.1310100000000
droEre2
AGAGACTCC---GTAACCAAACGGCACTGATTCGC-------------------ATCGGCAAATGCGAGTGGC---TTAAATCTTTCCTCCAAGTTGCTTGCAAACACTTCTGCTTTGTC---------CTGT---------------------------------------------------------------------------------------------------GATGT--ACGGCASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
..............................TTCGC-------------------ATCGGCAAATGCGAGTGGC---TT.......................................................................................................................................................................2630.331100000

Generated: 11/04/2014 at 10:06 PM