ID:

dps-mir-2544

 Coordinate:

XL_group1e:8378925-8379029 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.9 -24.7 -24.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATCTATGCATTGATAAATATGACATTCCCTGACTCCTCCATCAACAATCAATTGGTCTATACAAATGGTCTATAGCTTTCCTGGCTCTCGGCTCTATATGCTTTGTTTATTTATACTATATAGAACTGAGCAACAGGTAAATTATTTACCACCAAACCATCTATAAGACATCCGTTCCGAGAGTGGATATTCTTTTCGGATTAAT

***************************************************************..((((..((((.(((((((...(((((.((((((((...(((......))).)))))))).)))))...)))).)))))))..))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011

testis

 V112

male body		 M040

female body

 GSM444067

head

 M022

male body		 GSM343916

embryo

 M059

embryo

 SRR902010

ovaries

 M062

head

 SRR902012

CNS imaginal disc
......................................................................................................................TATAGAACTGAGCAACAGGTAA................................................................. 22 0 1 1668.00 1668 1483 148 9 18 1 4 1 3 0 1
......................................................................................................................TATAGAACTGAGCAACAGGTAAA................................................................ 23 0 1 379.00 379 346 30 1 1 1 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTA.................................................................. 21 0 1 292.00 292 272 13 4 1 2 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATG......................................................................................................... 22 0 1 133.00 133 84 2 41 1 0 1 4 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAA............................................................... 24 1 1 46.00 46 46 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGT................................................................... 20 0 1 43.00 43 30 9 4 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATAT.......................................................................................................... 21 0 1 35.00 35 18 2 14 0 1 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGG.................................................................... 19 0 1 28.00 28 28 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGGAA................................................................. 22 1 1 20.00 20 20 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAT................................................................. 22 1 1 19.00 19 19 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATC......................................................................................................... 22 1 1 15.00 15 13 0 1 1 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTC.................................................................. 21 1 1 14.00 14 13 1 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATCC........................................................................................................ 23 1 1 13.00 13 12 1 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATA........................................................................................................... 20 0 1 13.00 13 8 2 3 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGT........................................................................................................ 23 1 1 13.00 13 7 2 3 0 0 0 0 0 1 0
..............................................................................TCCTGGCTCTCGGCTCTATATGC........................................................................................................ 23 0 1 10.00 10 9 0 1 0 0 0 0 0 0 0
..........................................................................................................TTATTTATACTATATAGAACTGAGC.......................................................................... 25 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATAGAACTGAGCAACAGGTAA................................................................. 21 0 1 9.00 9 6 2 1 0 0 0 0 0 0 0
...........................................................................................................TATTTATACTATATAGAACTGAGCAA........................................................................ 26 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATT......................................................................................................... 22 1 1 8.00 8 7 1 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGCTT...................................................................................................... 25 0 1 8.00 8 7 0 1 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATCCC....................................................................................................... 24 2 1 8.00 8 5 1 0 0 1 0 0 0 1 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAAA.............................................................. 25 2 1 8.00 8 8 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAC................................................................ 23 1 1 8.00 8 8 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAG................................................................ 23 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGCTTTG.................................................................................................... 27 0 1 7.00 7 6 1 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAC................................................................. 22 1 1 7.00 7 5 1 0 1 0 0 0 0 0 0
..........................................................................................................TTATTTATACTATATAGAACTGAGCA......................................................................... 26 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAT................................................................ 23 1 1 5.00 5 2 3 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATCCCC...................................................................................................... 25 3 1 5.00 5 4 0 1 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTATC................................................................ 23 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAAAA............................................................. 26 2 1 4.00 4 3 1 0 0 0 0 0 0 0 0
...........................................................................................................TATTTATACTATATAGAACTGAGCA......................................................................... 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTAAA........................................................................................................... 20 1 1 4.00 4 2 2 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGGAAA................................................................ 23 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...........................................................................................................TATTTATACTATATAGAACTGAGC.......................................................................... 24 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTAT............................................................................................................ 19 0 1 4.00 4 0 0 3 1 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAACAG............................................................. 26 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...............................................................................CCTGGCTCTCGGCTCTATATG......................................................................................................... 21 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGAAA................................................................. 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAATT............................................................... 24 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGGGCAACAGGTAA................................................................. 22 1 1 4.00 4 2 2 0 0 0 0 0 0 0 0
.......................................................................................................TGTTTATTTATACTATATAGAACTGAG........................................................................... 27 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTATTTATACTATATAGAACTGAGCAA........................................................................ 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...........................................................TACAAATGGTCTATAGCTT............................................................................................................................... 19 0 1 3.00 3 1 0 0 0 2 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATA......................................................................................................... 22 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0
.................................................................................................................TACTATATAGAACTGAGCAACAGG.................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATAAA......................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.................................................................................................................TACTATATAGAACTGAGCAACAG..................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAT............................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGA........................................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...........................................................................................................TATTTATACTATATAGAACTG............................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTCC................................................................. 22 2 2 3.00 6 6 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAG..................................................................... 18 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGGA.................................................................. 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...........................................................................................................TATTTATACTATATAGAACTGAGCAAC....................................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................TTCCTGGCTCTCGGCTCTATAT.......................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAGA.............................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTCT................................................................. 22 2 1 2.00 2 1 0 0 0 1 0 0 0 0 0
..........................................................................................................TTATTTATACTATATAGAACTGAGCAA........................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................TACTATATAGAACTGAGCAA........................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATCCT....................................................................................................... 24 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..............................................................................................................TTATACTATATAGAACTGAGCAACAG..................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................TCTTGGCTCTCGGCTCTATATGT........................................................................................................ 23 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TGTAGAACTGAGCAACAGGTAA................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTATT................................................................ 23 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................ATATAGAACTGAGCAACAGGTAA................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................AATATAGAACTGAGCAACAGGT................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATAGAACTGAGCAACAGGTAAC................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACA...................................................................... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................................................CCTCCTGGCTCTCGGCTCTATATG......................................................................................................... 24 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.................................................................................................................TACTATATAGAACTGAGCAAC....................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAG............................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGAAACAGGTAA................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................TATACTATATAGAACTGAGCAACAG..................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAGTA.............................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TGTAGAACTGAGCAACAGGTAAA................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAG................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAATC............................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAATGC.............................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................CCTGGCTCTCGGCTCTATATCT........................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAACG.............................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATAA.......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATTT........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................TTCCTGGCTCTCGGCTCTAT............................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGGGCAACAGGGAA................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAC............................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACATGTAA................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTCG................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATAAAA........................................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................CTGGCTCTCGGCTCTATATGCTT...................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTCAA................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................TTATTTATACTATATAGAACTGAGCAACA...................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................ACCTGGTTCTCGGCTCTATATGT........................................................................................................ 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................TACTATATAGAACTGAGCAACAGGTAAT................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAATCA.............................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTAGAACTGAGCAACAGGTAA................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................TACTATATAGAACTGAGCAACA...................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTCTATG......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGTTAAA................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAATTGAGCAACAGGTAAA................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGCC....................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TTTATTTATACTATATAGAACTGA............................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TACAGAACTGAGCAACAGGTA.................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATCT........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAGCTGAGCAACAGGTAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTGAA................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGGACTGAGCAACAGGTA.................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTTGCTCTCGGCTCTATATT......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTTT................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCGACAGGGAAA................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAAAG............................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGTGCAACAGGTAA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TTTATACTATATAGAACTGAGC.......................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................TTGGCTCTCGGCTCTATATGCTT...................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGA................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGCA.................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATAGAACTGAGCAACAGG.................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGTTCTATATG......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGTAACAGGTA.................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACCGAGCAACAGGTAA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGTC....................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TACAGAACTGAGCAACAGGTAAA................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TATACTATATAGAACTGAGCAACAGGT................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGAAAA................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TTATTTATACTATATAGAACTGAGCAAC....................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TTATTTATACTATATAGAACTGAG........................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................CCTGGCTCTCGGCTCTATATCC........................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGCAA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAATTGG............................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TTTGTTTATTTATACTATATAGAAC............................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTTC................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATAGAACTGAGCAACAGGTA.................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TACAGAACTGAGCAACAGGTAA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTAAAATATC........................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTTATTTATACTATATAGAACTGTT........................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TAAAGAACTGAGCAACAGGTAA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGAA.................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGTCC...................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTA............................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGGAAAT............................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATCTC....................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................CCTGGCTCTCGGCTCTATATGCTTTG.................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATGCTTT..................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................TATACTATATAGAACTGAGCAACAGG.................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGCGCAACAGGTAA................................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................TGCTGGCTCTCGGCTCTATAA.......................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................TATAGAACTGAGGAACAGGTAA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATATCCG....................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TCCTGTCTCTCGGCTCTATATG......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................TCCTGGCTCTCGGCTCTATCCT......................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGCAACAGGTTCC................................................................ 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGGGAGAGTGGATATTCT............ 18 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
........................................TCAACGATTAATTGGTCT................................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................TATAGAACTGAGAAACAAGAAA................................................................. 22 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TATAGAACTGAGAAACAAGA................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAGATACGTAACTATTTATACTGTAAGGGACTGAGGAGGTAGTTGTTAGTTAACCAGATATGTTTACCAGATATCGAAAGGACCGAGAGCCGAGATATACGAAACAAATAAATATGATATATCTTGACTCGTTGTCCATTTAATAAATGGTGGTTTGGTAGATATTCTGTAGGCAAGGCTCTCACCTATAAGAAAAGCCTAATTA

**************************************************..((((..((((.(((((((...(((((.((((((((...(((......))).)))))))).)))))...)))).)))))))..))))....*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 V112

male body		 SRR902011

testis

 GSM444067

head

 SRR902010

ovaries

 GSM343916

embryo
................................GAGGAGGTAGTTGTTAGTTA......................................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0 0
...........................................................................GAAAGGACCGAGAGCCGAGATAT........................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
............................................................................AAAGGACCGAGAGCCGAGATA............................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
.............................................................................AAGGACCGAGAGCCGAGATATAC......................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
............................................................................AAAGGACCGAGAGCCGAGATAT........................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
...........................................................................GAAAGGACCGAGAGCCGAGAT............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................TATATCTTGACTCGTTGTCC.................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................AGGACCGAGAGCCGAGATAT........................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................TATCTTGACTCGTTGTCCATT................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................TTATCTTGACTCGTTGTCCATT................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
...........CTATTTAAACTGTCAGGG................................................................................................................................................................................ 18 2 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................AAATGGTGTTTGGGTAGA........................................... 18 2 6 0.17 1 0 0 0 1 0 0
................................................................................................TTACGAGACAAATAAAGATGA........................................................................................ 21 3 6 0.17 1 0 0 0 0 1 0
.........................................................................................................................................................GTTGGTAGATTTTGTGTAGG................................ 20 3 15 0.07 1 0 0 0 0 0 1
...........................GGAAAGAGGAGGGAGTTGTT.............................................................................................................................................................. 20 3 18 0.06 1 0 1 0 0 0 0
...........CTATTTAAACTGTCAGGGG............................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0
.................................ATGAGGTAGTTGTTAGGTTA........................................................................................................................................................ 20 3 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 XL_group1e:8378875-8379079 - dps-mir-2544 Known_mirbase ATCTATGCATTGATAAATATGACATTCCCTGACTCCTCCATCAACAATCAATTGGTCTATACAAATGGTCTATAGCTTTCCTGGCTCTCGGCTC-TATATGCTTTGTTTATTTATACTATATAGAACTGAGCAACAGGTAAATTATTTACCACCAAACCATCTATAAGACATCCGTTCCGAGAGTGGATATTCTTTTCGGATTAAT
droPer2 scaffold_13:190269-190461 + dpe_334 candidate-rescued ATCTATGCATTGATAAATATGACATTCACTGACTCCTCCATCAACAATCAATTGGT-------------CTATAGCTTTCCTGGCTCTCGGCTCCTATATGCTTTGTTTATTTATACCATTTAGAACTGAGAAACAGGTAAATTATTTACCACCAAACCATCTATAAGACATCCGTTCCGAGCGTGGATATTCTTTTCGGATTAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATCTATGCATTGATAAATATGACATTCCCTGACTCCTCCATCAACAATCAATTGGTCTATACAAATGGTCTATAGCTTTCCTGGCTCTCGGCTC-TATATGCTTTGTTTATTTATACTATATAGAACTGAGCAACAGGTAAATTATTTACCACCAAACCATCTATAAGACATCCGTTCCGAGAGTGGATATTCTTTTCGGATTAATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................TATAGAACTGAGCAACAGGTAA.................................................................2211668.0016681910418148314831
.......................................................................................................................TATAGAACTGAGCAACAGGTAAA................................................................231379.003791100013003460
.......................................................................................................................TATAGAACTGAGCAACAGGTA..................................................................211292.002922400011302720
..............................................................................TCCTGGCTCTCGGCTC-TATATG.........................................................................................................221133.00133041401120840
.......................................................................................................................TATAGAACTGAGCAACAGGTAAAA...............................................................24146.004600000000460
.......................................................................................................................TATAGAACTGAGCAACAGGT...................................................................20143.004304000090300
..............................................................................TCCTGGCTCTCGGCTC-TATAT..........................................................................................................21135.0035114000020180
.......................................................................................................................TATAGAACTGAGCAACAGG....................................................................19128.002800000000280
.......................................................................................................................TATAGAACTGAGCAACAGGTAT.................................................................22119.001900000000190
..............................................................................TCCTGGCTCTCGGCTC-TATATC.........................................................................................................22115.001501000100130
.......................................................................................................................TATAGAACTGAGCAACAGGTC..................................................................21114.001400000010130
..............................................................................TCCTGGCTCTCGGCTC-TATA...........................................................................................................20113.00130300002080
..............................................................................TCCTGGCTCTCGGCTC-TATATGT........................................................................................................23113.00130301002070
..............................................................................TCCTGGCTCTCGGCTC-TATATGC........................................................................................................23110.00100100000090
...........................................................................................................TTATTTATACTATATAGAACTGAGC..........................................................................25110.001000000000100
........................................................................................................................ATAGAACTGAGCAACAGGTAA.................................................................2119.0090100002060
............................................................................................................TATTTATACTATATAGAACTGAGCAA........................................................................2619.0090000000090
..............................................................................TCCTGGCTCTCGGCTC-TATATT.........................................................................................................2218.0080000001070
..............................................................................TCCTGGCTCTCGGCTC-TATATGCTT......................................................................................................2518.0080100000070
.......................................................................................................................TATAGAACTGAGCAACAGGTAAAAA..............................................................2518.0080000000080
.......................................................................................................................TATAGAACTGAGCAACAGGTAAC................................................................2318.0080000000080
.......................................................................................................................TATAGAACTGAGCAACAGGTAAG................................................................2317.0070000000070
..............................................................................TCCTGGCTCTCGGCTC-TATATGCTTTG....................................................................................................2717.0070000001060
.......................................................................................................................TATAGAACTGAGCAACAGGTAC.................................................................2217.0070000011050
...........................................................................................................TTATTTATACTATATAGAACTGAGCA.........................................................................2616.0060000000060
.......................................................................................................................TATAGAACTGAGCAACAGGTAAT................................................................2315.0050000003020
.......................................................................................................................TATAGAACTGAGCAACAGGTATC................................................................2315.0050000000050
............................................................................................................TATTTATACTATATAGAACTGAGCA.........................................................................2514.0040000000040
............................................................................................................TATTTATACTATATAGAACTGAGC..........................................................................2414.0040000000040
..............................................................................TCCTGGCTCTCGGCTC-TAT............................................................................................................1914.0040300010000
.......................................................................................................................TATAGAACTGAGCAACAGGTAAACAG.............................................................2614.0040000000040
...............................................................................CCTGGCTCTCGGCTC-TATATG.........................................................................................................2114.0040400000000
........................................................................................................TGTTTATTTATACTATATAGAACTGAG...........................................................................2714.0040000000040
..........................................................................................................TTTATTTATACTATATAGAACTGAGCAA........................................................................2813.0030000000030
...........................................................TACAAATGGTCTATAGCTT................................................................................................................................1913.0032000000010
..............................................................................TCCTGGCTCTCGGCTC-TATATA.........................................................................................................2213.0030200000010
..................................................................................................................TACTATATAGAACTGAGCAACAGG....................................................................2413.0030000000030
..............................................................................TCCTGGCTCTCGGCTC-TATAAA.........................................................................................................2213.0030000000030
..................................................................................................................TACTATATAGAACTGAGCAACAG.....................................................................2313.0030000000030
.......................................................................................................................TATAGAACTGAGCAACAGGTAAAT...............................................................2413.0030000000030
..............................................................................TCCTGGCTCTCGGCTC-TATATGA........................................................................................................2313.0030000000030
............................................................................................................TATTTATACTATATAGAACTG.............................................................................2113.0030000000030
.......................................................................................................................TATAGAACTGAGCAACAGGTCC.................................................................2223.0060000000060
.......................................................................................................................TATAGAACTGAGCAACAG.....................................................................1813.0030000001020
............................................................................................................TATTTATACTATATAGAACTGAGCAAC.......................................................................2713.0030000000030
.............................................................................TTCCTGGCTCTCGGCTC-TATAT..........................................................................................................2213.0030000000030
.......................................................................................................................TATAGAACTGAGCAACAGGTAAAGA..............................................................2512.0020000000020
.......................................................................................................................TATAGAACTGAGCAACAGGTCT.................................................................2212.0021000000010
...........................................................................................................TTATTTATACTATATAGAACTGAGCAA........................................................................2712.0020000000020
..................................................................................................................TACTATATAGAACTGAGCAA........................................................................2012.0020000000020
...............................................................................................................TTATACTATATAGAACTGAGCAACAG.....................................................................2612.0020000000020
.......................................................................................................................TATAGAACTGAGCAACAGGTATT................................................................2312.0020100000010
......................................................................................................................ATATAGAACTGAGCAACAGGTAA.................................................................2312.0020000000020
........................................................................................................................ATAGAACTGAGCAACAGGTAAC................................................................2212.0020000000020
.......................................................................................................................TATAGAACTGAGCAACA......................................................................1712.0020000000020
..................................................................................................................TACTATATAGAACTGAGCAAC.......................................................................2112.0020000000020
.......................................................................................................................TATAGAACTGAGCAACAGGTAAAG...............................................................2412.0020000000020
................................................................................................................TATACTATATAGAACTGAGCAACAG.....................................................................2512.0020000000020
.......................................................................................................................TATAGAACTGAGCAACAGGTAG.................................................................2211.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTAATC...............................................................2411.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTAATGC..............................................................2511.0010000000010
...............................................................................CCTGGCTCTCGGCTC-TATATCT........................................................................................................2211.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTAAACG..............................................................2511.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATAA..........................................................................................................2111.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATATTT........................................................................................................2311.0010000000010
.............................................................................TTCCTGGCTCTCGGCTC-TAT............................................................................................................2011.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTAAAC...............................................................2411.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTCG.................................................................2211.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATAAAA........................................................................................................2311.0010000000010
................................................................................CTGGCTCTCGGCTC-TATATGCTT......................................................................................................2311.0010000000010
...........................................................................................................TTATTTATACTATATAGAACTGAGCAACA......................................................................2911.0010000000010
..................................................................................................................TACTATATAGAACTGAGCAACAGGTAAT................................................................2811.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTAATCA..............................................................2511.0010000000010
..................................................................................................................TACTATATAGAACTGAGCAACA......................................................................2211.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATATGCC.......................................................................................................2411.0010000000010
..........................................................................................................TTTATTTATACTATATAGAACTGA............................................................................2411.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATATCT........................................................................................................2311.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTTT.................................................................2211.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTAAAAAG.............................................................2611.0010000000010
..............................................................................................................TTTATACTATATAGAACTGAGC..........................................................................2211.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGA...................................................................2011.0010000010000
........................................................................................................................ATAGAACTGAGCAACAGG....................................................................1811.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATATGTC.......................................................................................................2411.0010000001000
................................................................................................................TATACTATATAGAACTGAGCAACAGGT...................................................................2711.0010000000010
...........................................................................................................TTATTTATACTATATAGAACTGAGCAAC.......................................................................2811.0010000000010
...........................................................................................................TTATTTATACTATATAGAACTGAG...........................................................................2411.0010000000010
......................................................................................................TTTGTTTATTTATACTATATAGAAC...............................................................................2511.0010000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTTC.................................................................2211.0010000000010
........................................................................................................................ATAGAACTGAGCAACAGGTA..................................................................2011.0010000000010
........................................................................................................TGTTTATTTATACTATATAGAACTGTT...........................................................................2711.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATATGTCC......................................................................................................2511.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TA.............................................................................................................1811.0010000001000
..............................................................................TCCTGGCTCTCGGCTC-TATATCTC.......................................................................................................2411.0010000000010
...............................................................................CCTGGCTCTCGGCTC-TATATGCTTTG....................................................................................................2611.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATATGCTTT.....................................................................................................2611.0010100000000
................................................................................................................TATACTATATAGAACTGAGCAACAGG....................................................................2611.0010000000010
..............................................................................TCCTGGCTCTCGGCTC-TATCCT.........................................................................................................2230.3310000000010
.......................................................................................................................TATAGAACTGAGCAACAGGTTCC................................................................2330.3310000000010
droPer2
ATCTATGCATTGATAAATATGACATTCACTGACTCCTCCATCAACAATCAATTGGT-------------CTATAGCTTTCCTGGCTCTCGGCTCCTATATGCTTTGTTTATTTATACCATTTAGAACTGAGAAACAGGTAAATTATTTACCACCAAACCATCTATAAGACATCCGTTCCGAGCGTGGATATTCTTTTCGGATTAATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................TTTAGAACTGAGAAACAGGTAA.................................................................221289.00289011364265
.......................................................................................................................TTTAGAACTGAGAAACAGGT...................................................................20126.00260200024
.......................................................................................................................TTTAGAACTGAGAAACAGGTA..................................................................21123.00230000122
.......................................................................................................................TTTAGAACTGAGAAACAGGTAAA................................................................23121.00210102018
.......................................................................................................................TTTAGAACTGAGAAACAGG....................................................................1916.006000006
.......................................................................................................................TTTAGAACTGAGAAACAGGTAAT................................................................2312.002000002
........................................................................................................................TTAGAACTGAGAAACAGGTAAA................................................................2211.001000001
........................................................................................................................TTAGAACTGAGAAACAGGT...................................................................1911.001000001
.......................................................................................................................TTTAGAACTGAGAAACAGGTCT.................................................................2211.001000001
.......................................................................................................................TTTAGAACTGAGAAACAGGTAT.................................................................2211.001000001
.......................................................................................................................TTTAGAACTGAGAAACAGGTAAAA...............................................................2411.001000001
.......................................................................................................TTGTTTATTTATACCATTTAGAACTGAG...........................................................................2811.001000001
.......................................................................................................................TTTAGAACTGAGAAACAGGTAC.................................................................2211.001000001
........................................................................................................................TTAGAACTGAGAAACAGGTAA.................................................................2111.001010000
.......................................................................................................................TTTAGAACTGAGAAACAGGTT..................................................................2111.001000001

Generated: 10/20/2015 at 07:07 PM