ID:

dps-mir-2542-3

 Coordinate:

XL_group1e:8378579-8378663 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.3 -29.0 -28.7

Flybase annnotation

intergenic

No Repeatable elements found

mature

  1. dps-mir-2542-1  XL_group1e:8373664-8373685 -
  2. dps_3415  XL_group1e:8374413-8374434 -
  3. dps-mir-2542-2  XL_group1e:8377011-8377032 -
  4. dps_3417  XL_group1e:8377859-8377880 -
  5. dps-mir-2542-3  XL_group1e:8378629-8378650 -
  6. Unknown_singleton_1920:1845-1866 +
star

  1. dps-mir-2542-1  XL_group1e:8373625-8373647 -
  2. dps-mir-2542-2  XL_group1e:8376972-8376994 -
  3. dps_3417  XL_group1e:8377820-8377842 -
  4. dps-mir-2542-3  XL_group1e:8378590-8378612 -

Sense Strand Reads

AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGGCAGAATATATTTCATGGGCTTATATTTGTATTTTTGCTCGGACATTTATGTACAATTTGAACGTCATAGATGGTTGCAGCATAAATAGAATTATTAGCCCCAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATG

************************************************..(((((.(((.((.(((((.((((((..((((((((.((.........))))))))))..)).)))).))))).)).))).)))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011

testis

 V112

male body		 M040

female body

 GSM343916

embryo

 M022

male body		 GSM444067

head

 SRR902010

ovaries

 M059

embryo

 M062

head

 SRR902012

CNS imaginal disc
...............................................................TATTTTTGCTCGGACATTTATG.................................................................................................... 22 0 6 422.67 2536 2223 219 35 6 8 18 20 2 1 4
...............................................................TATTTTTGCTCGGACATTTAT..................................................................................................... 21 0 6 204.83 1229 950 228 10 3 8 18 9 0 1 2
.....................................................................................................TAGATGGTTGCAGCATAAATAGA............................................................. 23 0 4 92.25 369 266 24 38 33 0 1 2 4 1 0
...............................................................TATTTTTGCTCGGACATTTATC.................................................................................................... 22 1 6 36.17 217 161 44 1 0 9 2 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGT................................................................................................... 23 0 6 27.00 162 83 63 2 9 1 2 1 0 0 1
.....................................................................................................TAGATGGTTGCAGCATAAATAG.............................................................. 22 0 4 26.25 105 84 5 14 2 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGA................................................................................................... 23 1 6 21.67 130 88 32 1 0 6 1 2 0 0 0
...............................................................TATTTTTGCTCGGACATTTA...................................................................................................... 20 0 6 20.67 124 115 8 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATT.................................................................................................... 22 1 6 18.33 110 97 10 0 0 2 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAA..................................................................................................... 21 1 6 13.50 81 75 4 0 0 1 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCC................................................................................................... 23 2 6 10.33 62 52 7 0 0 3 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGA............................................................. 22 0 4 9.75 39 27 4 6 0 0 1 0 0 1 0
...............................................................TATTTTTGCTCGGACATTT....................................................................................................... 19 0 6 9.17 55 49 0 2 0 1 2 0 0 1 0
...............................................................TATTTTTGCTCGGACATTTATGTA.................................................................................................. 24 0 6 8.17 49 45 4 0 0 0 0 0 0 0 0
............................................TTTCATGGGCTTATATTTG.......................................................................................................................... 19 0 6 7.67 46 44 0 1 0 0 1 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATG.................................................................................................... 21 0 6 7.17 43 36 2 5 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAATAGA............................................................. 21 0 4 6.25 25 18 3 4 0 0 0 0 0 0 0
............................................................................................TGAACGTCATAGATGGTTGCAGCATAAA................................................................. 28 0 1 6.00 6 0 6 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCT................................................................................................... 23 1 6 5.83 35 31 3 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACAATT............................................................................................. 29 0 6 4.83 29 20 9 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTC.................................................................................................. 24 1 6 4.50 27 18 6 0 0 3 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATA.................................................................................................... 22 1 6 4.17 25 23 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCC.................................................................................................. 24 3 6 4.00 24 19 1 0 0 4 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAC................................................................................................. 25 0 6 3.83 23 23 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGT................................................................................................... 22 0 6 3.67 22 4 9 5 4 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTT...................................................................................................... 20 1 6 3.50 21 20 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCA................................................................................................... 23 2 6 3.50 21 19 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAA.................................................................................................... 22 2 6 3.33 20 19 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAA............................................................ 24 0 4 3.00 12 8 3 0 1 0 0 0 0 0 0
........................................................................................................ATGGTTGCAGCATAAATAGA............................................................. 20 0 4 2.75 11 0 10 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACAA............................................................................................... 27 0 6 2.67 16 15 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAA.................................................................................................. 24 1 6 2.67 16 15 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACAAT.............................................................................................. 28 0 6 2.50 15 15 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCC................................................................................................. 25 1 6 2.50 15 15 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATA............................................................... 21 0 4 2.50 10 3 3 1 2 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTT................................................................................................... 23 1 6 2.50 15 14 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACA................................................................................................ 26 0 6 2.17 13 13 0 0 0 0 0 0 0 0 0
............................................................................................TGAACGTCATAGATGGTTGCAGCATAAAA................................................................ 29 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
............................................................................................TGAACGTCATAGATGGTTGCAGCATAAAT................................................................ 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTAA.................................................................................................. 24 2 6 1.83 11 11 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAA.............................................................. 22 1 4 1.75 7 2 5 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTAT..................................................................................................... 20 0 6 1.67 10 7 2 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATAA................................................................................................... 23 2 6 1.67 10 10 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATG.................................................................................................... 22 1 6 1.67 10 1 4 4 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTA................................................................................................... 23 2 6 1.67 10 10 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTATG.................................................................................................... 22 1 6 1.50 9 9 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAAT................................................................ 20 0 4 1.50 6 0 3 3 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTT.................................................................................................. 24 1 6 1.50 9 0 4 0 0 1 0 4 0 0 0
.............................................TTCATGGGCTTATATTTG.......................................................................................................................... 18 0 6 1.33 8 7 0 0 0 0 0 1 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTTT.................................................................................................. 24 2 6 1.33 8 8 0 0 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAG.............................................................. 21 0 4 1.25 5 2 0 3 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGT............................................................. 22 1 4 1.25 5 2 2 1 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGT............................................................. 23 1 4 1.25 5 1 2 2 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTT................................................................................................. 25 2 6 1.17 7 6 0 0 0 1 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTACAATT............................................................................................. 28 0 6 1.17 7 6 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTT..................................................................................................... 21 1 6 1.17 7 7 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTC...................................................................................................... 20 1 6 1.17 7 5 2 0 0 0 0 0 0 0 0
............................................................................................TGAACGTCATAGATGGTTGC......................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................TGAACGTCATAGATGGTTGCCG....................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................TTGAACGTCATAGATGGTTGCAGC...................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................TGAACGTCATAGATGGTTGCAGCAT.................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTC..................................................................................................... 21 2 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTA....................................................................................................... 19 1 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATT........................................................................................................ 18 0 6 0.83 5 3 1 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAAA................................................................................................... 23 3 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTACTCGGACATTTATG.................................................................................................... 22 1 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTC................................................................................................... 23 2 6 0.83 5 5 0 0 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAATAG.............................................................. 20 0 4 0.75 3 1 0 2 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCCC.................................................................................................... 22 3 8 0.75 6 6 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCATCATAAATAGA............................................................. 23 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTTGCAGCATAAATAGA............................................................. 19 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTC.................................................................................................. 23 1 6 0.67 4 1 3 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCCC................................................................................................. 25 3 6 0.67 4 4 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCC..................................................................................................... 21 2 6 0.67 4 3 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCG................................................................................................... 23 2 6 0.67 4 4 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAAA................................................................................................. 25 2 6 0.67 4 4 0 0 0 0 0 0 0 0 0
..............................................................GTATTTTTGCTCGGACATTT....................................................................................................... 20 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCAAAA................................................................................................ 26 3 6 0.50 3 3 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTC...................................................................................................... 19 1 6 0.50 3 2 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATC.................................................................................................... 22 2 6 0.50 3 0 2 0 0 1 0 0 0 0 0
...................................................................TTTGCTCGGACATTTATG.................................................................................................... 18 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTG..................................................................................................... 21 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTAA................................................................................................ 26 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCT..................................................................................................... 21 1 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGC................................................................................................... 23 1 6 0.50 3 0 1 0 0 0 0 0 2 0 0
...............................................................TATTTTTGCTCGGACA.......................................................................................................... 16 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACAGTTATG.................................................................................................... 22 1 6 0.50 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATTT.............................................................. 22 2 4 0.50 2 0 2 0 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAAT................................................................ 19 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAA........................................................... 25 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTTGGACATTTATG.................................................................................................... 22 1 6 0.50 3 2 0 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATAAA.................................................................................................. 24 2 6 0.50 3 2 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTCC.................................................................................................. 24 3 6 0.50 3 0 0 0 0 0 0 3 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCTC.................................................................................................. 24 2 6 0.50 3 2 0 1 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAT............................................................ 24 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTTC.................................................................................................. 24 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................ATAGATGGTTGCAGCATAA.................................................................. 19 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTCCTCGGACATTTATG.................................................................................................... 22 1 6 0.50 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATT............................................................... 21 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAAA................................................................ 20 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACAT......................................................................................................... 17 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTGAG................................................................................................ 26 3 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCAA.................................................................................................. 24 2 6 0.50 3 2 1 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTGGGACATTTATG.................................................................................................... 21 1 6 0.50 3 0 1 2 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGC................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAC..................................................................................................... 21 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTCC................................................................................................. 24 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACC................................................................................................ 26 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACTTTTATG.................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGTCATTTATG.................................................................................................... 22 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTCA.................................................................................................. 24 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTG................................................................................................... 23 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCTGACATTTATG.................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
................................................................TTTTTTGCTCGGACATTTATG.................................................................................................... 21 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGATATTTATG.................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTACTCGGACATTTAA..................................................................................................... 21 2 6 0.33 2 1 1 0 0 0 0 0 0 0 0
................................................................TATTTTGCTCGGACATTTATG.................................................................................................... 21 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATAAAA................................................................................................. 25 3 6 0.33 2 0 0 0 0 1 0 0 0 1 0
...............................................................TATTTTTGCTCGGGCATTTAT..................................................................................................... 21 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
..............................................................CTATTTTTGCTCGGACATTTATG.................................................................................................... 23 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTCT.................................................................................................. 24 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
..............................................................CTATTTTTGCTCGGACATTTATGA................................................................................................... 24 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
..............................................................GTATTTTTGCTCGGACATTTATT.................................................................................................... 23 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCT...................................................................................................... 20 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTTGGACATTTAT..................................................................................................... 21 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTC....................................................................................................... 19 1 6 0.33 2 1 0 0 0 0 1 0 0 0 0
..................................................................TTTTGCTCGGACATTTAT..................................................................................................... 18 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTTCTCGGACATTTATG.................................................................................................... 22 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCT.................................................................................................. 24 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACGCTCT............................................................................................ 30 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAC.................................................................................................. 24 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCCAAA.............................................................................................. 28 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.................................................................TTTTTGCTCGGACATTTATGTACAATT............................................................................................. 27 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAT........................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTCGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................ATAGATGGTTGCAGCATAAATAGA............................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGATAA.......................................................... 26 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATGAATAGA............................................................. 23 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TAGATGCTTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGTAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGAGGGTTGCAGAATAAATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................ATAGATGGTTGCAGCATAAATAG.............................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAAA.......................................................... 26 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGATTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TGGATGGTTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.......................................................................................................GATGGTTGCAGCATAAATAGT............................................................. 21 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATTGATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAAGT............................................................... 21 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................AGTTGGATGCAGCATAGATAGA............................................................. 22 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAATAGAA............................................................ 22 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGG............................................................. 23 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................ATAGATGGTTGCAGCATAAA................................................................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................ATGGTTGCAGCATAAATAGAAA........................................................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGGATGGTTGCAGCATAAATAG.............................................................. 22 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................TAGATGGTTGCAGCATAAA................................................................. 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATCCC............................................................. 23 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGTATAGATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGGA............................................................ 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGAAGGTTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGGTGCCGCATAAATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGAA............................................................ 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................CAGATGGTTGCAGCATAAATAG.............................................................. 22 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCCGCATAAATAGA............................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................ATGGTTGCAGCATAAATAGAA............................................................ 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGAATTCT........................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAAA................................................................ 18 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTTGCAGCATAAATAG.............................................................. 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................ACGGTTGCAGCATAAATAGA............................................................. 20 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATA............................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGGATGGTTGCAGCATAAATAGAA............................................................ 24 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................TAGATGGTTGCAGCCTAAATAGA............................................................. 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
................................................................ATTTTTTCTCGGACATTTATGTC.................................................................................................. 23 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
..............................................................ATATTTTTGCTCGGACATTTATG.................................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTTTGCTCGGACATTTAT..................................................................................................... 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCTCC................................................................................................. 25 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCG..................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.............................................................GTTATTTTTGCTCGGACATTTAT..................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATCAA.................................................................................................. 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCAAA................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...................................................................TTTGCTCGGACATTTATTT................................................................................................... 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGTCATTTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCC...................................................................................................... 20 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTCGCTCGGACATTTATGA................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATGTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................TATTTTTGCTCGGACATTTATTTTTA................................................................................................ 26 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TGTTTTTGCTCGGACATTTATC.................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................TATTTTTGCTCGGACAATTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGCCCATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGA................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGTCCATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
..............................................................GTATTTTTGCTCGGACATTTATGTA.................................................................................................. 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCTC................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTATT.................................................................................................... 22 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
................................................................ATTTTTCCTCGGACATTTATGC................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0
...............................................................TATTTTTGCTCGAACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTAAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCAAA............................................................................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTAC..................................................................................................... 21 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................TATTTTTGCTCGGACATTTATTGAG................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................CATTTTTGCTCGGACATTTATGTAC................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTGTG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCCGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAATC................................................................................................... 23 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TAGTTTTGCTCGGACATTTATCT................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................CATTTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTTTGCTCGGACATTTATG.................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTAAA..................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTGT..................................................................................................... 21 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATT.................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGATCGGACATTTATT.................................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTACAAT.............................................................................................. 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTATTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATATG...................................................................................................... 20 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTA...................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCAGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..................................................................TTTTGCTCGGACATTTATG.................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.............................................................GGTATTTTTGCTCGGACATTTATG.................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACTTTTATTAA.................................................................................................. 24 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................GATTTTTGCTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGGTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTAA..................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAG.................................................................................................. 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTAGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAGAA............................................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCT................................................................................................. 25 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...................................................................TTTGCTCGGACATTTAT..................................................................................................... 17 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTAA..................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAG................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAAAA.................................................................................................. 24 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCTGTACAATT............................................................................................. 29 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTGGGACAATTATGT................................................................................................... 22 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTTAAAA............................................................................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAT................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGAC........................................................................................................... 15 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTG...................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTCCCT.............................................................................................. 28 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTC................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGTGACATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACACTTATG.................................................................................................... 22 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCTT................................................................................................ 26 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...................................................................TTTGCTCGGACATTTATGT................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTAAA................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..............................................................ATATTTTTGCTCGGACATTTAT..................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...........................................ATTTCATGGGCTTATATTTG.......................................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTCTGCTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAA................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.................................................................TATTTGCTCGGACATTTATG.................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATT.................................................................................................... 22 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0
................................................................AGTTTTGCTCGGACATTTATGT................................................................................................... 22 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0
...............................................................TATTTTTGCTCGGACATTTATCCA.................................................................................................. 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGAT.................................................................................................. 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGGCATTTA...................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTTCTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
................................................................AGTTTTGCGCGGACATTTATGT................................................................................................... 22 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATGTACA................................................................................................ 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACCTTTATC.................................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATTTGGA................................................................................................ 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAAAA................................................................................................ 26 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGCA.................................................................................................. 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCTGACATTTATGT................................................................................................... 23 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TGTTTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATCT....................................................................................................... 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTAA................................................................................................. 24 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
..........................................TATTTCATGGGCTTATATTTG.......................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TAGTTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGACCATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACCTTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTG....................................................................................................... 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCA................................................................................................. 25 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTACTCGGACATTTATC.................................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATAAA...................................................................................................... 20 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTT....................................................................................................... 19 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGTCGTTTATGTC.................................................................................................. 23 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTTT.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCG.................................................................................................. 24 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCTT.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCTTTT................................................................................................... 23 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTTCTCGGACATTTATC.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..............................................................TATTTTTTGCTCGGACATTTATG.................................................................................................... 23 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCA..................................................................................................... 21 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCTA.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
................................................................TTTTCTGCTCGGACATTTAT..................................................................................................... 20 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATT........................................................................................................ 18 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0
..................................................................TTTTGCTCGGACATTTAA..................................................................................................... 18 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTTGGACATTTATC.................................................................................................... 22 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTCC.................................................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTC...................................................................................................... 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTAAAA.................................................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
................................................................TATTTTGCTCGGACATTTAT..................................................................................................... 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTGTTGATCGGGCATTTAT..................................................................................................... 21 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCCC..................................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTAA.................................................................................................... 22 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
................................................................TATTTTGCTCGGACATTTA...................................................................................................... 19 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
..........................................................ATTTGTGTTTTCGGTCGGAC........................................................................................................... 20 3 15 0.07 1 0 1 0 0 0 0 0 0 0 0
................................................................TATTTTGCTCGGACATTTAA..................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTAAAATCCTAGCTCACTAAGGCTAAGCAATCCCGTCTTATATAAAGTACCCGAATATAAACATAAAAACGAGCCTGTAAATACATGTTAAACTTGCAGTATCTACCAACGTCGTATTTATCTTAATAATCGGGGTTTTGGTTGGTACTCGAGAGGCAAGGCGCCCACTTTCACGCGATTTTAC

**********************************************..(((((.(((.((.(((((.((((((..((((((((.((.........))))))))))..)).)))).))))).)).))).)))))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 V112

male body		 SRR902012

CNS imaginal disc
....................................................................................................TATCTACCAACGTCGTATTTA................................................................ 21 0 4 0.25 1 1 0 0
...............................................................................AAATACATGTTAAACTTGCGGTA................................................................................... 23 1 4 0.25 1 0 1 0
...........................................................................................................................................TGGTTGGTACTCGAGAGGCAA......................... 21 0 5 0.20 1 0 0 1
....................AAGCTAAGCAATCCCGTCTTATATAAAG......................................................................................................................................... 28 1 6 0.17 1 1 0 0
..................TAAGGCTAAGCAATCCCGTCTTATA.............................................................................................................................................. 25 0 6 0.17 1 1 0 0
...............................................................................................................................TTATCGGGGTTTGGGTTG........................................ 18 2 20 0.15 3 3 0 0
..................................................................................................................................TCTGGGTTTTGGGTGGTGCTC.................................. 21 3 11 0.09 1 1 0 0
...................................................................................................................................CTGGGTTTTGGGTGGTGCTC.................................. 20 3 14 0.07 1 1 0 0
..................................................................................................................................GCCGGGTTTTGGTTGGTTCT................................... 20 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 XL_group1e:8378529-8378713 - dps-mir-2542-3 Known_mirbase AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGG-CAGAATATATTTCATGGGCTTATATTTGTATTTTTGCTCGGACATTTATGTACAATTTGAACGTCATAGATGGTTGCAGCATAAATAGAATTATTAGCCCCAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATG
droPer2 scaffold_13:190619-190803 + dpe_101 confident AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGG-GAGAATATATTTCATGGGCTTATATTTTTATTTGTACTCAGACATTTATGTACAATTTGAACGTCATAAATGTTTGCAGCATAAATAGAATTATTAGCCACAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATG
droAna3 scaffold_12903:549990-550047 + -----------------------GATCCATTAGAGACAAAAT---GTTCATGTGTATATATTTGTATTTTTTCGCAGAAATATA------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGG-CAGAATATATTTCATGGGCTTATATTTGTATTTTTGCTCGGACATTTATGTACAATTTGAACGTCATAGATGGTTGCAGCATAAATAGAATTATTAGCCCCAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
................................................................TATTTTTGCTCGGACATTTATG....................................................................................................226422.672536835216182192022234
................................................................TATTTTTGCTCGGACATTTAT.....................................................................................................216204.8312298100131822899502
......................................................................................................TAGATGGTTGCAGCATAAATAGA.............................................................23492.25369038413312422660
................................................................TATTTTTGCTCGGACATTTATC....................................................................................................22636.172179100024401610
................................................................TATTTTTGCTCGGACATTTATGT...................................................................................................23627.00162120092631831
......................................................................................................TAGATGGTTGCAGCATAAATAG..............................................................22426.25105014002050840
................................................................TATTTTTGCTCGGACATTTATGA...................................................................................................23621.67130610001322880
................................................................TATTTTTGCTCGGACATTTA......................................................................................................20620.67124010000801150
................................................................TATTTTTGCTCGGACATTTATT....................................................................................................22618.33110200001100970
................................................................TATTTTTGCTCGGACATTTAA.....................................................................................................21613.508110000140750
................................................................TATTTTTGCTCGGACATTTATCC...................................................................................................23610.336230000070520
.......................................................................................................AGATGGTTGCAGCATAAATAGA.............................................................2249.753906010140270
................................................................TATTTTTGCTCGGACATTT.......................................................................................................1969.175512010200490
................................................................TATTTTTGCTCGGACATTTATGTA..................................................................................................2468.174900000040450
.............................................TTTCATGGGCTTATATTTG..........................................................................................................................1967.674601000100440
.................................................................ATTTTTGCTCGGACATTTATG....................................................................................................2167.174305000020360
........................................................................................................GATGGTTGCAGCATAAATAGA.............................................................2146.252504000030180
.............................................................................................TGAACGTCATAGATGGTTGCAGCATAAA.................................................................2816.0060000006000
................................................................TATTTTTGCTCGGACATTTATGTACAATT.............................................................................................2964.832900000090200
................................................................TATTTTTGCTCGGACATTTATGTC..................................................................................................2464.502730000060180
................................................................TATTTTTGCTCGGACATTTATA....................................................................................................2264.172500000020230
................................................................TATTTTTGCTCGGACATTTATCCC..................................................................................................2464.002440000010190
................................................................TATTTTTGCTCGGACATTTATGTAC.................................................................................................2563.832300000000230
.................................................................ATTTTTGCTCGGACATTTATGT...................................................................................................2263.67220500409040
................................................................TATTTTTGCTCGGACATTTT......................................................................................................2063.502100000010200
................................................................TATTTTTGCTCGGACATTTATCA...................................................................................................2363.502100000020190
................................................................TATTTTTGCTCGGACATTTAAA....................................................................................................2263.332000000010190
......................................................................................................TAGATGGTTGCAGCATAAATAGAA............................................................2443.00120000103080
.........................................................................................................ATGGTTGCAGCATAAATAGA.............................................................2042.751101000010000
................................................................TATTTTTGCTCGGACATTTATGTACAA...............................................................................................2762.671600000010150
................................................................TATTTTTGCTCGGACATTTATGTACAAT..............................................................................................2862.501500000000150
......................................................................................................TAGATGGTTGCAGCATAAATA...............................................................2142.50100100213030
................................................................TATTTTTGCTCGGACATTTATGTACA................................................................................................2662.171300000000130
.............................................................................................TGAACGTCATAGATGGTTGCAGCATAAAA................................................................2912.0020000002000
.............................................................................................TGAACGTCATAGATGGTTGCAGCATAAAT................................................................2912.0020000002000
......................................................................................................TAGATGGTTGCAGCATAAATAA..............................................................2241.7570000005020
.................................................................ATTTTTGCTCGGACATTTAT.....................................................................................................2061.67100100002070
................................................................TATTTTTGCTCGGACATTTATAA...................................................................................................2361.671000000000100
................................................................TATTTTTGCTCGGACATTTATTA...................................................................................................2361.671000000000100
......................................................................................................TAGATGGTTGCAGCATAAAT................................................................2041.5060300003000
................................................................TATTTTTGCTCGGACATTTATGTT..................................................................................................2461.5091000004400
..............................................TTCATGGGCTTATATTTG..........................................................................................................................1861.3380000000170
.......................................................................................................AGATGGTTGCAGCATAAATAG..............................................................2141.2550300000020
.......................................................................................................AGATGGTTGCAGCATAAATAGT.............................................................2241.2550100002020
......................................................................................................TAGATGGTTGCAGCATAAATAGT.............................................................2341.2550200002010
................................................................TATTTTTGCTCGGACATTTATGTTT.................................................................................................2561.1771000000060
.................................................................ATTTTTGCTCGGACATTTATGTACAATT.............................................................................................2861.1770000001060
................................................................TATTTTTGCTCGGACATTTC......................................................................................................2061.1770000002050
.............................................................................................TGAACGTCATAGATGGTTGC.........................................................................2011.0010000001000
............................................................................................TTGAACGTCATAGATGGTTGCAGC......................................................................2411.0010000001000
.............................................................................................TGAACGTCATAGATGGTTGCAGCAT....................................................................2511.0010000001000
................................................................TATTTTTGCTCGGACATTTTC.....................................................................................................2160.8350000000050
................................................................TATTTTTGCTCGGACATTA.......................................................................................................1960.8350000000050
................................................................TATTTTTGCTCGGACATT........................................................................................................1860.8351000001030
................................................................TATTTTTGCTCGGACATTTAAAA...................................................................................................2360.8350000000050
................................................................TATTTTTGCTCGGACATTTATTC...................................................................................................2360.8350000000050
........................................................................................................GATGGTTGCAGCATAAATAG..............................................................2040.7530200000010
................................................................TATTTTTGCTCGGACATTTCCC....................................................................................................2280.7560000000060
..........................................................................................................TGGTTGCAGCATAAATAGA.............................................................1940.7530300000000
.................................................................ATTTTTGCTCGGACATTTATGTC..................................................................................................2360.6740000003010
................................................................TATTTTTGCTCGGACATTTCC.....................................................................................................2160.6741000000030
................................................................TATTTTTGCTCGGACATTTATCG...................................................................................................2360.6740000000040
...............................................................GTATTTTTGCTCGGACATTT.......................................................................................................2060.6740000000040
.................................................................ATTTTTGCTCGGACATTTC......................................................................................................1960.5031000000020
....................................................................TTTGCTCGGACATTTATG....................................................................................................1860.5030000000030
................................................................TATTTTTGCTCGGACATTTTG.....................................................................................................2160.5030000000030
................................................................TATTTTTGCTCGGACATTTATGC...................................................................................................2360.5030020001000
................................................................TATTTTTGCTCGGACA..........................................................................................................1660.5030000000030
......................................................................................................TAGATGGTTGCAGCATAAATTT..............................................................2240.5020000002000
.......................................................................................................AGATGGTTGCAGCATAAAT................................................................1940.5020000000020
......................................................................................................TAGATGGTTGCAGCATAAATAGAAA...........................................................2540.5020000000020
................................................................TATTTTTGCTCGGACATTTATTCC..................................................................................................2460.5030000000300
......................................................................................................TAGATGGTTGCAGCATAAATAGAT............................................................2440.5020000000020
.....................................................................................................ATAGATGGTTGCAGCATAA..................................................................1940.5020000002000
......................................................................................................TAGATGGTTGCAGCATAAATT...............................................................2140.5020000002000
......................................................................................................TAGATGGTTGCAGCATAAAA................................................................2040.5020000002000
................................................................TATTTTTGCTCGGACAT.........................................................................................................1760.5030000000030
................................................................TATTTTTGCTCGGACATTTATGTGAG................................................................................................2660.5030000000030
.................................................................ATTTTTGCTCGGACATTTATGC...................................................................................................2260.3320000000020
................................................................TATTTTTGCTCGGACATTTAC.....................................................................................................2160.3320000000020
................................................................TATTTTTGCTCGGACATTTATGTACC................................................................................................2660.3320000000020
................................................................TATTTTTGCTCGGACATTTATTG...................................................................................................2360.3320000000020
................................................................TATTTTTGCTCGGACATTTATTCT..................................................................................................2460.3320000000020
...............................................................GTATTTTTGCTCGGACATTTATT....................................................................................................2360.3320000000020
................................................................TATTTTTGCTCGGACATTCT......................................................................................................2060.3320000000020
................................................................TATTTTTGCTCGGACATTC.......................................................................................................1960.3320000010010
...................................................................TTTTGCTCGGACATTTAT.....................................................................................................1860.3320000000020
................................................................TATTTTTGCTCGGACATTTATCCT..................................................................................................2460.3320000000020
................................................................TATTTTTGCTCGGACATTTATGAC..................................................................................................2460.3320000000020
..................................................................TTTTTGCTCGGACATTTATGTACAATT.............................................................................................2760.3320000000020
......................................................................................................TAGATGGTTGCAGCATAAATAGAAT...........................................................2540.2510000000010
.....................................................................................................ATAGATGGTTGCAGCATAAATAGA.............................................................2440.2510000000010
......................................................................................................TAGATGGTTGCAGCATAAATAGATAA..........................................................2640.2510000000010
.....................................................................................................ATAGATGGTTGCAGCATAAATAG..............................................................2340.2510000000010
......................................................................................................TAGATGGTTGCAGCATAAATAGAAAA..........................................................2640.2510000001000
........................................................................................................GATGGTTGCAGCATAAATAGT.............................................................2140.2510000001000
......................................................................................................TAGATGGTTGCAGCATAAAGT...............................................................2140.2510000001000
........................................................................................................GATGGTTGCAGCATAAATAGAA............................................................2240.2510100000000
......................................................................................................TAGATGGTTGCAGCATAAATAGG.............................................................2340.2510010000000
.....................................................................................................ATAGATGGTTGCAGCATAAA.................................................................2040.2510000001000
.........................................................................................................ATGGTTGCAGCATAAATAGAAA...........................................................2240.2510000001000
......................................................................................................TAGATGGTTGCAGCATAAA.................................................................1940.2510000001000
......................................................................................................TAGATGGTTGCAGCATAAATCCC.............................................................2340.2510000000010
.......................................................................................................AGATGGTTGCAGCATAAATAGAA............................................................2340.2510000001000
.........................................................................................................ATGGTTGCAGCATAAATAGAA............................................................2140.2510000001000
........................................................................................................GATGGTTGCAGCATAAAA................................................................1840.2510000000010
..........................................................................................................TGGTTGCAGCATAAATAG..............................................................1840.2510100000000
.......................................................................................................AGATGGTTGCAGCATAAATA...............................................................2040.2510000001000
..................................................................TTTTTGCTCGGACATTTAT.....................................................................................................1960.1710000001000
................................................................TATTTTTGCTCGGACATTTCG.....................................................................................................2160.1710000000010
................................................................TATTTTTGCTCGGACATTCC......................................................................................................2060.1710000000010
.................................................................ATTTTTGCTCGGACATTTATGA...................................................................................................2260.1710000000010
...............................................................GTATTTTTGCTCGGACATTTATGTA..................................................................................................2560.1710000000010
................................................................TATTTTTGCTCGGACATTTAATC...................................................................................................2360.1710000000010
..................................................................TTTTTGCTCGGACATTTATG....................................................................................................2060.1710000000010
.................................................................ATTTTTGCTCGGACATTTATT....................................................................................................2160.1710000001000
.................................................................ATTTTTGCTCGGACATTTATGTACAAT..............................................................................................2760.1710000000010
...................................................................TTTTGCTCGGACATTTATG....................................................................................................1960.1710000000010
.................................................................ATTTTTGCTCGGACATTTAA.....................................................................................................2060.1710000000010
................................................................TATTTTTGCTCGGACATTTATGAG..................................................................................................2460.1710000000010
................................................................TATTTTTGCTCGGACATTTATGTCT.................................................................................................2560.1710000001000
....................................................................TTTGCTCGGACATTTAT.....................................................................................................1760.1710000000010
................................................................TATTTTTGCTCGGACATTTATGTAG.................................................................................................2560.1710000000010
................................................................TATTTTTGCTCGGACATTTATGTAT.................................................................................................2560.1710000000010
................................................................TATTTTTGCTCGGAC...........................................................................................................1560.1710000000010
................................................................TATTTTTGCTCGGACATTTG......................................................................................................2060.1710000000010
................................................................TATTTTTGCTCGGACATTTATGTCTT................................................................................................2660.1710000000010
....................................................................TTTGCTCGGACATTTATGT...................................................................................................1960.1710000000010
............................................ATTTCATGGGCTTATATTTG..........................................................................................................................2060.1710000000010
................................................................TATTTTTGCTCGGACATTTATGTAA.................................................................................................2560.1710000000010
.................................................................ATTTTTGCTCGGACATTTATGAT..................................................................................................2360.1710000000010
.................................................................ATTTTTGCTCGGACATTTATGTAA.................................................................................................2460.1710001000000
...........................................TATTTCATGGGCTTATATTTG..........................................................................................................................2160.1710000000010
................................................................TATTTTTGCTCGGACATTG.......................................................................................................1960.1710000000010
................................................................TATTTTTGCTCGGACATTTATGTCA.................................................................................................2560.1710000000010
................................................................TATTTTTGCTCGGACATTTATCCG..................................................................................................2470.1410000001000
................................................................TATTTTTGCTCGGACATTTCA.....................................................................................................2170.1410000000010
...................................................................TTTTGCTCGGACATTTAA.....................................................................................................1870.1410100000000
................................................................TATTTTTGCTCGGACATTTTCC....................................................................................................2280.1310000000010
................................................................TATTTTTGCTCGGACATTCCC.....................................................................................................2180.1310000000010
................................................................TATTTTTGCTCGGACATTTTAA....................................................................................................2290.1110000000010
droPer2
AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGG-GAGAATATATTTCATGGGCTTATATTTTTATTTGTACTCAGACATTTATGTACAATTTGAACGTCATAAATGTTTGCAGCATAAATAGAATTATTAGCCACAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................TAAATGTTTGCAGCATAAATAGA.............................................................23162.00620404153
......................................................................................................TAAATGTTTGCAGCATAAATAG..............................................................22161.00610002059
................................................................TATTTGTACTCAGACATTTATG....................................................................................................22129.00296210101
................................................................TATTTGTACTCAGACATTTATGT...................................................................................................2313.003030000
......................................................................................................TAAATGTTTGCAGCATAAATAGAA............................................................2413.003010002
......................................................................................................TAAATGTTTGCAGCATAAATAGT.............................................................2312.002000002
......................................................................................................TAAATGTTTGCAGCATAAATA...............................................................2112.002000002
................................................................TATTTGTACTCAGACATTTAT.....................................................................................................2112.002010001
......................................................................................................TAAATGTTTGCAGCATAAATAGAAA...........................................................2511.001000001
.................................................................ATTTGTACTCAGACATTTATG....................................................................................................2111.001010000
......................................................................................................TAAATGTTTGCAGCATAAATAGTCC...........................................................2511.001000100
......................................................................................................TAAATGTTTGCAGCATAAAT................................................................2011.001000001
......................................................................................................TAAATGTTTGCAGCATAAATAGATA...........................................................2511.001000001
droAna3
-----------------------GATCCATTAGAGACAAAAT---GTTCATGTGTATATATTTGTATTTTTTCGCAGAAATATA------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................AAAAT---GTTCATGTGTATATATTT...........................................................................................................................2312.002110000
.....................................AAAAT---GTTCATGTGTATATATTTG..........................................................................................................................2411.001000001
.....................................AAAAT---GTTCATGTGTATATAT.............................................................................................................................2111.001000010

Generated: 10/20/2015 at 07:12 PM