ID:

dps-mir-2542-2

 Coordinate:

XL_group1e:8376961-8377045 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.3 -29.0 -28.7

Flybase annnotation

intergenic

No Repeatable elements found

mature

  1. dps-mir-2542-1  XL_group1e:8373664-8373685 -
  2. dps_3415  XL_group1e:8374413-8374434 -
  3. dps-mir-2542-2  XL_group1e:8377011-8377032 -
  4. dps_3417  XL_group1e:8377859-8377880 -
  5. dps-mir-2542-3  XL_group1e:8378629-8378650 -
  6. Unknown_singleton_1920:1845-1866 +
star

  1. dps-mir-2542-1  XL_group1e:8373625-8373647 -
  2. dps-mir-2542-2  XL_group1e:8376972-8376994 -
  3. dps_3417  XL_group1e:8377820-8377842 -
  4. dps-mir-2542-3  XL_group1e:8378590-8378612 -

Sense Strand Reads

AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGGCAGAATATATTTCATGGGCTTATATTTGTATTTTTGCTCGGACATTTATGTACAATTTGAGCGTCATAGATGGTTGCAGCATAAATAGAATTATTAGCCCCAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATA

************************************************..(((((.(((.((.(((((.((((((..((((((((.((.........))))))))))..)).)))).))))).)).))).)))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011

testis

 V112

male body		 M040

female body

 GSM343916

embryo

 GSM444067

head

 M022

male body		 SRR902010

ovaries

 M059

embryo

 M062

head

 SRR902012

CNS imaginal disc
...............................................................TATTTTTGCTCGGACATTTATG.................................................................................................... 22 0 6 422.67 2536 2223 219 35 6 18 8 20 2 1 4
...............................................................TATTTTTGCTCGGACATTTAT..................................................................................................... 21 0 6 204.83 1229 950 228 10 3 18 8 9 0 1 2
.....................................................................................................TAGATGGTTGCAGCATAAATAGA............................................................. 23 0 4 92.25 369 266 24 38 33 1 0 2 4 1 0
...............................................................TATTTTTGCTCGGACATTTATC.................................................................................................... 22 1 6 36.17 217 161 44 1 0 2 9 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGT................................................................................................... 23 0 6 27.00 162 83 63 2 9 2 1 1 0 0 1
.....................................................................................................TAGATGGTTGCAGCATAAATAG.............................................................. 22 0 4 26.25 105 84 5 14 2 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGA................................................................................................... 23 1 6 21.67 130 88 32 1 0 1 6 2 0 0 0
...............................................................TATTTTTGCTCGGACATTTA...................................................................................................... 20 0 6 20.67 124 115 8 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATT.................................................................................................... 22 1 6 18.33 110 97 10 0 0 1 2 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAA..................................................................................................... 21 1 6 13.50 81 75 4 0 0 1 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCC................................................................................................... 23 2 6 10.33 62 52 7 0 0 0 3 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGA............................................................. 22 0 4 9.75 39 27 4 6 0 1 0 0 0 1 0
...............................................................TATTTTTGCTCGGACATTT....................................................................................................... 19 0 6 9.17 55 49 0 2 0 2 1 0 0 1 0
...............................................................TATTTTTGCTCGGACATTTATGTA.................................................................................................. 24 0 6 8.17 49 45 4 0 0 0 0 0 0 0 0
............................................TTTCATGGGCTTATATTTG.......................................................................................................................... 19 0 6 7.67 46 44 0 1 0 1 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATG.................................................................................................... 21 0 6 7.17 43 36 2 5 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAATAGA............................................................. 21 0 4 6.25 25 18 3 4 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCT................................................................................................... 23 1 6 5.83 35 31 3 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACAATT............................................................................................. 29 0 6 4.83 29 20 9 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTC.................................................................................................. 24 1 6 4.50 27 18 6 0 0 0 3 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATA.................................................................................................... 22 1 6 4.17 25 23 2 0 0 0 0 0 0 0 0
...........................................................................................TTGAGCATCATAGATGTTGG.......................................................................... 20 3 13 4.08 53 0 0 53 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCC.................................................................................................. 24 3 6 4.00 24 19 1 0 0 0 4 0 0 0 0
.......................................................................................CAGGTTGAGCATCATAGATG.............................................................................. 20 3 9 4.00 36 0 13 23 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAC................................................................................................. 25 0 6 3.83 23 23 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGT................................................................................................... 22 0 6 3.67 22 4 9 5 4 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCA................................................................................................... 23 2 6 3.50 21 19 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTT...................................................................................................... 20 1 6 3.50 21 20 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAA.................................................................................................... 22 2 6 3.33 20 19 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAA............................................................ 24 0 4 3.00 12 8 3 0 1 0 0 0 0 0 0
........................................................................................................ATGGTTGCAGCATAAATAGA............................................................. 20 0 4 2.75 11 0 10 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAA.................................................................................................. 24 1 6 2.67 16 15 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACAA............................................................................................... 27 0 6 2.67 16 15 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACAAT.............................................................................................. 28 0 6 2.50 15 15 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATA............................................................... 21 0 4 2.50 10 3 3 1 2 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTT................................................................................................... 23 1 6 2.50 15 14 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCC................................................................................................. 25 1 6 2.50 15 15 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACA................................................................................................ 26 0 6 2.17 13 13 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTAA.................................................................................................. 24 2 6 1.83 11 11 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAA.............................................................. 22 1 4 1.75 7 2 5 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTAT..................................................................................................... 20 0 6 1.67 10 7 2 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTA................................................................................................... 23 2 6 1.67 10 10 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATAA................................................................................................... 23 2 6 1.67 10 10 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATG.................................................................................................... 22 1 6 1.67 10 1 4 4 1 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAAT................................................................ 20 0 4 1.50 6 0 3 3 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTT.................................................................................................. 24 1 6 1.50 9 0 4 0 0 0 1 4 0 0 0
...............................................................TATTTTTGTTCGGACATTTATG.................................................................................................... 22 1 6 1.50 9 9 0 0 0 0 0 0 0 0 0
.............................................TTCATGGGCTTATATTTG.......................................................................................................................... 18 0 6 1.33 8 7 0 0 0 0 0 1 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTTT.................................................................................................. 24 2 6 1.33 8 8 0 0 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGT............................................................. 22 1 4 1.25 5 2 2 1 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAG.............................................................. 21 0 4 1.25 5 2 0 3 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGT............................................................. 23 1 4 1.25 5 1 2 2 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTACAATT............................................................................................. 28 0 6 1.17 7 6 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTT................................................................................................. 25 2 6 1.17 7 6 0 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTT..................................................................................................... 21 1 6 1.17 7 7 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTC...................................................................................................... 20 1 6 1.17 7 5 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTC..................................................................................................... 21 2 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTC................................................................................................... 23 2 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAAA................................................................................................... 23 3 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTA....................................................................................................... 19 1 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATT........................................................................................................ 18 0 6 0.83 5 3 1 0 0 0 1 0 0 0 0
...............................................................TATTTTTACTCGGACATTTATG.................................................................................................... 22 1 6 0.83 5 5 0 0 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAATAG.............................................................. 20 0 4 0.75 3 1 0 2 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCATCATAAATAGA............................................................. 23 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCCC.................................................................................................... 22 3 8 0.75 6 6 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTTGCAGCATAAATAGA............................................................. 19 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCG................................................................................................... 23 2 6 0.67 4 4 0 0 0 0 0 0 0 0 0
............................................................................................TGAGCGTCATAGATGGTTGCAGCA..................................................................... 24 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTC.................................................................................................. 23 1 6 0.67 4 1 3 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCCC................................................................................................. 25 3 6 0.67 4 4 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCC..................................................................................................... 21 2 6 0.67 4 3 0 0 0 0 1 0 0 0 0
..............................................................GTATTTTTGCTCGGACATTT....................................................................................................... 20 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0
............................................................................................TGAGCGTCATAGATGGTTGCAG....................................................................... 22 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAAA................................................................................................. 25 2 6 0.67 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAAA................................................................ 20 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTC...................................................................................................... 19 1 6 0.50 3 2 0 0 0 0 1 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAT............................................................ 24 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACAGTTATG.................................................................................................... 22 1 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACAT......................................................................................................... 17 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAA........................................................... 25 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...................................................................TTTGCTCGGACATTTATG.................................................................................................... 18 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATT............................................................... 21 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCAAAA................................................................................................ 26 3 6 0.50 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAAT................................................................ 19 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACA.......................................................................................................... 16 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATTT.............................................................. 22 2 4 0.50 2 0 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATAAA.................................................................................................. 24 2 6 0.50 3 2 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTTGGACATTTATG.................................................................................................... 22 1 6 0.50 3 2 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGC................................................................................................... 23 1 6 0.50 3 0 1 0 0 0 0 0 2 0 0
...............................................................TATTTTTGCTCGGACATTTATTCC.................................................................................................. 24 3 6 0.50 3 0 0 0 0 0 0 3 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCAA.................................................................................................. 24 2 6 0.50 3 2 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCTC.................................................................................................. 24 2 6 0.50 3 2 0 1 0 0 0 0 0 0 0
................................................................ATTTTTGCTGGGACATTTATG.................................................................................................... 21 1 6 0.50 3 0 1 2 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATC.................................................................................................... 22 2 6 0.50 3 0 2 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTGAG................................................................................................ 26 3 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTG..................................................................................................... 21 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................ATAGATGGTTGCAGCATAA.................................................................. 19 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCT..................................................................................................... 21 1 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTTC.................................................................................................. 24 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTCCTCGGACATTTATG.................................................................................................... 22 1 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTAA................................................................................................ 26 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATAAAA................................................................................................. 25 3 6 0.33 2 0 0 0 0 0 1 0 0 1 0
..............................................................GTATTTTTGCTCGGACATTTATT.................................................................................................... 23 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAC..................................................................................................... 21 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTTCTCGGACATTTATG.................................................................................................... 22 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACGCTCT............................................................................................ 30 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGATATTTATG.................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTACTCGGACATTTAA..................................................................................................... 21 2 6 0.33 2 1 1 0 0 0 0 0 0 0 0
.................................................................TTTTTGCTCGGACATTTATGTACAATT............................................................................................. 27 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
..............................................................CTATTTTTGCTCGGACATTTATG.................................................................................................... 23 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCCAAA.............................................................................................. 28 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTTGGACATTTAT..................................................................................................... 21 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
................................................................TATTTTGCTCGGACATTTATG.................................................................................................... 21 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCTGACATTTATG.................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTC....................................................................................................... 19 1 6 0.33 2 1 0 0 0 1 0 0 0 0 0
...........................................................................................TTGAGCGTCATAGATGGATGCAG....................................................................... 23 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGGGCATTTAT..................................................................................................... 21 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTG................................................................................................... 23 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTACC................................................................................................ 26 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGTCATTTATG.................................................................................................... 22 1 6 0.33 2 1 1 0 0 0 0 0 0 0 0
................................................................TTTTTTGCTCGGACATTTATG.................................................................................................... 21 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
..................................................................TTTTGCTCGGACATTTAT..................................................................................................... 18 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTCA.................................................................................................. 24 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAC.................................................................................................. 24 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
..............................................................CTATTTTTGCTCGGACATTTATGA................................................................................................... 24 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................TACAATTTGAGCGTCATAGATGGTT........................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTCT.................................................................................................. 24 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACTTTTATG.................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGC................................................................................................... 22 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCT.................................................................................................. 24 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
............................................................................................TGAGCGTCATAGATGGTTGCAGCATAAAA................................................................ 29 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTCC................................................................................................. 24 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCT...................................................................................................... 20 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0
............................................................................................TGAGCGTCATAGATGGTTGCAGCAT.................................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................AGTTGGATGCAGCATAGATAGA............................................................. 22 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGGA............................................................ 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGAAGGTTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATTGATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAA................................................................. 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGG............................................................. 23 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................ATGGTTGCAGCATAAATAGAAA........................................................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGTAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATCCC............................................................. 23 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGAA............................................................ 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGTATAGATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TAGATGCTTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGATTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TGGATGGTTGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................TGGTTGCAGCATAAATAG.............................................................. 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAAGT............................................................... 21 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................ATAGATGGTTGCAGCATAAATAG.............................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAAA.......................................................... 26 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAATAGT............................................................. 21 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................CAGATGGTTGCAGCATAAATAG.............................................................. 22 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCCTAAATAGA............................................................. 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAAA................................................................ 18 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
........................................................................................AGGTTGAGCATCATAGATG.............................................................................. 19 3 16 0.25 4 0 0 4 0 0 0 0 0 0 0
........................................................................................................ACGGTTGCAGCATAAATAGA............................................................. 20 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAT........................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................GATGGTTGCAGCATAAATAGAA............................................................ 22 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................TTGAGCATCATAGATGTTGGC......................................................................... 21 3 8 0.25 2 0 0 2 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCAGCATGAATAGA............................................................. 23 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TAGATGGTCGCAGCATAAATAGA............................................................. 23 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................ATGGTTGCAGCATAAATAGAA............................................................ 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................ATAGATGGTTGCAGCATAAATAGA............................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGGTGCCGCATAAATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................TGGATGGTTGCAGCATAAATAGAA............................................................ 24 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................AGATGGTTGCAGCATAAATA............................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGGATGGTTGCAGCATAAATAG.............................................................. 22 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................TAGATGGTTGCAGCATAAATAGATAA.......................................................... 26 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGATGGTTGCCGCATAAATAGA............................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TAGAGGGTTGCAGAATAAATAGA............................................................. 23 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................AGATGGTTGCAGCATAAATAGAATTCT........................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................ATAGATGGTTGCAGCATAAA................................................................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACCTTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATCAA.................................................................................................. 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGTCATTTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..........................................TATTTCATGGGCTTATATTTG.......................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACAATTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTTTGCTCGGACATTTAT..................................................................................................... 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTGT..................................................................................................... 21 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
................................................................ATTTTTTCTCGGACATTTATGTC.................................................................................................. 23 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTAAA..................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..............................................................GTATTTTTGCTCGGACATTTATGTA.................................................................................................. 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..................................................................TTTTGCTCGGACATTTATG.................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCG..................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................AGTTTTGCTCGGACATTTATGT................................................................................................... 22 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0
...................................................................TTTGCTCGGACATTTATGT................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCTCC................................................................................................. 25 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGATCGGACATTTATT.................................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCTGACATTTATGT................................................................................................... 23 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATGTACA................................................................................................ 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0
.............................................................GTTATTTTTGCTCGGACATTTAT..................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTTTTA................................................................................................ 26 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCAGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTGAG................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTAA................................................................................................. 24 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................TATTTTTGCTCGGACATTTATCAAA................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACTTTTATTAA.................................................................................................. 24 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGGTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTA...................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCC...................................................................................................... 20 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTATTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TAGTTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...................................................................TTTGCTCGGACATTTATTT................................................................................................... 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................GATTTTTGCTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCTC................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAA................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.............................................................GGTATTTTTGCTCGGACATTTATG.................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTCTGCTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAT................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTAAA................................................................................................. 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTAC..................................................................................................... 21 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................TATTTTTGCTCGGACATTTATGTCAAA............................................................................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCTT................................................................................................ 26 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGAACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAATC................................................................................................... 23 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTCCCT.............................................................................................. 28 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTGTG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATGTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................TATTTTTGCTCGTCCATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCGACCATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTAA..................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATATG...................................................................................................... 20 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTG....................................................................................................... 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................CATTTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGAC........................................................................................................... 15 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTATT.................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAAAA................................................................................................ 26 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0
................................................................ATTTTTCCTCGGACATTTATGC................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0
...............................................................TATTTTTGCTCGGACATTTG...................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TAGTTTTGCTCGGACATTTATCT................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTAA..................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGCCCATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...............................................................TATTTTTGCTCCGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TGTTTTTGCTCGGACATTTATC.................................................................................................... 22 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0
...............................................................TATTTTTGCTCGGACATTTCTGTACAATT............................................................................................. 29 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGTACAAT.............................................................................................. 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTTC................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.................................................................TATTTGCTCGGACATTTATG.................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................CATTTTTGCTCGGACATTTATGTAC................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..............................................................ATATTTTTGCTCGGACATTTATG.................................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCT................................................................................................. 25 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTACTCGGACATTTATC.................................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...................................................................TTTGCTCGGACATTTAT..................................................................................................... 17 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTAAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
................................................................AGTTTTGCGCGGACATTTATGT................................................................................................... 22 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATCT....................................................................................................... 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATTTGGA................................................................................................ 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTAGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGTGACATTTATG.................................................................................................... 22 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACCTTTATC.................................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGAT.................................................................................................. 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATT.................................................................................................... 21 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTCA................................................................................................. 25 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TGTTTTTGCTCGGACATTTATG.................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGCA.................................................................................................. 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTTTGCTCGGACATTTATG.................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCA.................................................................................................. 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTCGCTCGGACATTTATGA................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAG................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..............................................................ATATTTTTGCTCGGACATTTAT..................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACACTTATG.................................................................................................... 22 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...........................................ATTTCATGGGCTTATATTTG.......................................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTTATT.................................................................................................... 22 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0
................................................................ATTTTTGCTGGGACAATTATGT................................................................................................... 22 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATTTAAAA............................................................................................... 27 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGACATTTATGA................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGGCATTTA...................................................................................................... 20 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGAG.................................................................................................. 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTAAAAA.................................................................................................. 24 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTTCTCGGACATTTAT..................................................................................................... 21 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATGTAGAA............................................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCTTTT................................................................................................... 23 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCTT.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATAAA...................................................................................................... 20 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..................................................................TTTTGCTCGGACATTTAA..................................................................................................... 18 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0
................................................................ATTTTTGCTCGGTCGTTTATGTC.................................................................................................. 23 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTTT.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..............................................................TATTTTTTGCTCGGACATTTATG.................................................................................................... 23 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCTA.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTATCCG.................................................................................................. 24 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0
................................................................TTTTCTGCTCGGACATTTAT..................................................................................................... 20 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATT........................................................................................................ 18 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTCA..................................................................................................... 21 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTGGGACATTT....................................................................................................... 19 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0
...............................................................TATTTTTTCTCGGACATTTATC.................................................................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGTTCGGACATTTC...................................................................................................... 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTAAAA.................................................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
................................................................TATTTTGCTCGGACATTTAT..................................................................................................... 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTTGGACATTTATC.................................................................................................... 22 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0
...............................................................TATTGTTGATCGGGCATTTAT..................................................................................................... 21 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTCCC..................................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTCC.................................................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
................................................................TATTTTGCTCGGACATTTA...................................................................................................... 19 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
...............................................................TATTTTTGCTCGGACATTTTAA.................................................................................................... 22 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
........................................................................................AGGTTGAGCATCATAGAT............................................................................... 18 3 20 0.10 2 0 0 2 0 0 0 0 0 0 0

Anti-sense strand reads

TTTAAAATCCTAGCTCACTAAGGCTAAGCAATCCCGTCTTATATAAAGTACCCGAATATAAACATAAAAACGAGCCTGTAAATACATGTTAAACTCGCAGTATCTACCAACGTCGTATTTATCTTAATAATCGGGGTTTTGGTTGGTACTCGAGAGGCAAGGCGCCCACTTTCACGCGATTTTAT

**********************************************..(((((.(((.((.(((((.((((((..((((((((.((.........))))))))))..)).)))).))))).)).))).)))))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 SRR902012

CNS imaginal disc

 V112

male body
.......................................................................................GTCCAACTCGTAGTATCTAC.............................................................................. 20 3 9 10.67 96 96 0 0
.......................................................................................GTCCAACTCGTAGTATCTA............................................................................... 19 3 20 2.70 54 54 0 0
......................................................................................TGTCCAACTCGTAGTATCTAC.............................................................................. 21 3 5 1.20 6 5 0 1
........................................................................................TCCAACTCGTAGTATCTAC.............................................................................. 19 3 16 0.94 15 15 0 0
.....................................................................................ATGTCCAACTCGTAGTATCTAC.............................................................................. 22 3 3 0.33 1 1 0 0
....................................................................................................TATCTACCAACGTCGTATTTA................................................................ 21 0 4 0.25 1 1 0 0
........................................................................................TCCAACTCGTAGTATCTA............................................................................... 18 3 20 0.25 5 5 0 0
..........................................................................................CAACTCGCAGTATCTACAACC.......................................................................... 21 3 4 0.25 1 1 0 0
...........................................................................................AACTCGTAGTATCTACAACC.......................................................................... 20 3 13 0.23 3 3 0 0
...........................................................................................................................................TGGTTGGTACTCGAGAGGCAA......................... 21 0 5 0.20 1 0 1 0
....................AAGCTAAGCAATCCCGTCTTATATAAAG......................................................................................................................................... 28 1 6 0.17 1 1 0 0
..................TAAGGCTAAGCAATCCCGTCTTATA.............................................................................................................................................. 25 0 6 0.17 1 1 0 0
...............................................................................................................................TTATCGGGGTTTGGGTTG........................................ 18 2 20 0.15 3 3 0 0
......................................................................................GGTTCAACTCGTAGTATCTAC.............................................................................. 21 3 7 0.14 1 1 0 0
......................................................................................TGTCCAACTCGTAGTATCTA............................................................................... 20 3 8 0.13 1 1 0 0
..................................................................................................................................TCTGGGTTTTGGGTGGTGCTC.................................. 21 3 11 0.09 1 1 0 0
...................................................................................................................................CTGGGTTTTGGGTGGTGCTC.................................. 20 3 14 0.07 1 1 0 0
..................................................................................................................................GCCGGGTTTTGGTTGGTTCT................................... 20 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 XL_group1e:8376911-8377095 - dps-mir-2542-2 Known_mirbase AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGGCAGAATATATTTCATGGGCTTATATTTGTATTTTTGCTCGGACATTTATGTACAATTTGAGCGTCATAGATGGTTGCAGCATAAATAGAATTATTAGCCCCAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATA
droPer2 scaffold_13:190619-190803 + dpe_101 confident AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGGGAGAATATATTTCATGGGCTTATATTTTTATTTGTACTCAGACATTTATGTACAATTTGAACGTCATAAATGTTTGCAGCATAAATAGAATTATTAGCCACAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGGCAGAATATATTTCATGGGCTTATATTTGTATTTTTGCTCGGACATTTATGTACAATTTGAGCGTCATAGATGGTTGCAGCATAAATAGAATTATTAGCCCCAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................TATTTTTGCTCGGACATTTATG....................................................................................................226422.672536835216182192022234
...............................................................TATTTTTGCTCGGACATTTAT.....................................................................................................216204.8312298100131822899502
.....................................................................................................TAGATGGTTGCAGCATAAATAGA.............................................................23492.25369038413312422660
...............................................................TATTTTTGCTCGGACATTTATC....................................................................................................22636.172179100024401610
...............................................................TATTTTTGCTCGGACATTTATGT...................................................................................................23627.00162120092631831
.....................................................................................................TAGATGGTTGCAGCATAAATAG..............................................................22426.25105014002050840
...............................................................TATTTTTGCTCGGACATTTATGA...................................................................................................23621.67130610001322880
...............................................................TATTTTTGCTCGGACATTTA......................................................................................................20620.67124010000801150
...............................................................TATTTTTGCTCGGACATTTATT....................................................................................................22618.33110200001100970
...............................................................TATTTTTGCTCGGACATTTAA.....................................................................................................21613.508110000140750
...............................................................TATTTTTGCTCGGACATTTATCC...................................................................................................23610.336230000070520
......................................................................................................AGATGGTTGCAGCATAAATAGA.............................................................2249.753906010140270
...............................................................TATTTTTGCTCGGACATTT.......................................................................................................1969.175512010200490
...............................................................TATTTTTGCTCGGACATTTATGTA..................................................................................................2468.174900000040450
............................................TTTCATGGGCTTATATTTG..........................................................................................................................1967.674601000100440
................................................................ATTTTTGCTCGGACATTTATG....................................................................................................2167.174305000020360
.......................................................................................................GATGGTTGCAGCATAAATAGA.............................................................2146.252504000030180
...............................................................TATTTTTGCTCGGACATTTATGTACAATT.............................................................................................2964.832900000090200
...............................................................TATTTTTGCTCGGACATTTATGTC..................................................................................................2464.502730000060180
...............................................................TATTTTTGCTCGGACATTTATA....................................................................................................2264.172500000020230
...............................................................TATTTTTGCTCGGACATTTATCCC..................................................................................................2464.002440000010190
...............................................................TATTTTTGCTCGGACATTTATGTAC.................................................................................................2563.832300000000230
................................................................ATTTTTGCTCGGACATTTATGT...................................................................................................2263.67220500409040
...............................................................TATTTTTGCTCGGACATTTATCA...................................................................................................2363.502100000020190
...............................................................TATTTTTGCTCGGACATTTT......................................................................................................2063.502100000010200
...............................................................TATTTTTGCTCGGACATTTAAA....................................................................................................2263.332000000010190
.....................................................................................................TAGATGGTTGCAGCATAAATAGAA............................................................2443.00120000103080
........................................................................................................ATGGTTGCAGCATAAATAGA.............................................................2042.751101000010000
...............................................................TATTTTTGCTCGGACATTTATGTACAA...............................................................................................2762.671600000010150
...............................................................TATTTTTGCTCGGACATTTATGTACAAT..............................................................................................2862.501500000000150
.....................................................................................................TAGATGGTTGCAGCATAAATA...............................................................2142.50100100213030
...............................................................TATTTTTGCTCGGACATTTATGTACA................................................................................................2662.171300000000130
.....................................................................................................TAGATGGTTGCAGCATAAATAA..............................................................2241.7570000005020
................................................................ATTTTTGCTCGGACATTTAT.....................................................................................................2061.67100100002070
...............................................................TATTTTTGCTCGGACATTTATTA...................................................................................................2361.671000000000100
...............................................................TATTTTTGCTCGGACATTTATAA...................................................................................................2361.671000000000100
.....................................................................................................TAGATGGTTGCAGCATAAAT................................................................2041.5060300003000
...............................................................TATTTTTGCTCGGACATTTATGTT..................................................................................................2461.5091000004400
.............................................TTCATGGGCTTATATTTG..........................................................................................................................1861.3380000000170
......................................................................................................AGATGGTTGCAGCATAAATAGT.............................................................2241.2550100002020
......................................................................................................AGATGGTTGCAGCATAAATAG..............................................................2141.2550300000020
.....................................................................................................TAGATGGTTGCAGCATAAATAGT.............................................................2341.2550200002010
................................................................ATTTTTGCTCGGACATTTATGTACAATT.............................................................................................2861.1770000001060
...............................................................TATTTTTGCTCGGACATTTATGTTT.................................................................................................2561.1771000000060
...............................................................TATTTTTGCTCGGACATTTC......................................................................................................2061.1770000002050
...............................................................TATTTTTGCTCGGACATTTTC.....................................................................................................2160.8350000000050
...............................................................TATTTTTGCTCGGACATTTATTC...................................................................................................2360.8350000000050
...............................................................TATTTTTGCTCGGACATTTAAAA...................................................................................................2360.8350000000050
...............................................................TATTTTTGCTCGGACATTA.......................................................................................................1960.8350000000050
...............................................................TATTTTTGCTCGGACATT........................................................................................................1860.8351000001030
.......................................................................................................GATGGTTGCAGCATAAATAG..............................................................2040.7530200000010
...............................................................TATTTTTGCTCGGACATTTCCC....................................................................................................2280.7560000000060
.........................................................................................................TGGTTGCAGCATAAATAGA.............................................................1940.7530300000000
...............................................................TATTTTTGCTCGGACATTTATCG...................................................................................................2360.6740000000040
............................................................................................TGAGCGTCATAGATGGTTGCAGCA.....................................................................2430.6720000001010
................................................................ATTTTTGCTCGGACATTTATGTC..................................................................................................2360.6740000003010
...............................................................TATTTTTGCTCGGACATTTCC.....................................................................................................2160.6741000000030
..............................................................GTATTTTTGCTCGGACATTT.......................................................................................................2060.6740000000040
............................................................................................TGAGCGTCATAGATGGTTGCAG.......................................................................2230.6720000001010
.....................................................................................................TAGATGGTTGCAGCATAAAA................................................................2040.5020000002000
................................................................ATTTTTGCTCGGACATTTC......................................................................................................1960.5031000000020
.....................................................................................................TAGATGGTTGCAGCATAAATAGAT............................................................2440.5020000000020
...............................................................TATTTTTGCTCGGACAT.........................................................................................................1760.5030000000030
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAA...........................................................2540.5020000000020
...................................................................TTTGCTCGGACATTTATG....................................................................................................1860.5030000000030
.....................................................................................................TAGATGGTTGCAGCATAAATT...............................................................2140.5020000002000
......................................................................................................AGATGGTTGCAGCATAAAT................................................................1940.5020000000020
...............................................................TATTTTTGCTCGGACA..........................................................................................................1660.5030000000030
.....................................................................................................TAGATGGTTGCAGCATAAATTT..............................................................2240.5020000002000
...............................................................TATTTTTGCTCGGACATTTATGC...................................................................................................2360.5030020001000
...............................................................TATTTTTGCTCGGACATTTATTCC..................................................................................................2460.5030000000300
...............................................................TATTTTTGCTCGGACATTTATGTGAG................................................................................................2660.5030000000030
...............................................................TATTTTTGCTCGGACATTTTG.....................................................................................................2160.5030000000030
....................................................................................................ATAGATGGTTGCAGCATAA..................................................................1940.5020000002000
..............................................................GTATTTTTGCTCGGACATTTATT....................................................................................................2360.3320000000020
...............................................................TATTTTTGCTCGGACATTTAC.....................................................................................................2160.3320000000020
.................................................................TTTTTGCTCGGACATTTATGTACAATT.............................................................................................2760.3320000000020
...............................................................TATTTTTGCTCGGACATTC.......................................................................................................1960.3320000010010
...............................................................TATTTTTGCTCGGACATTTATTG...................................................................................................2360.3320000000020
...............................................................TATTTTTGCTCGGACATTTATGTACC................................................................................................2660.3320000000020
..................................................................TTTTGCTCGGACATTTAT.....................................................................................................1860.3320000000020
...............................................................TATTTTTGCTCGGACATTTATGAC..................................................................................................2460.3320000000020
.....................................................................................TACAATTTGAGCGTCATAGATGGTT...........................................................................2530.3310000000010
...............................................................TATTTTTGCTCGGACATTTATTCT..................................................................................................2460.3320000000020
................................................................ATTTTTGCTCGGACATTTATGC...................................................................................................2260.3320000000020
...............................................................TATTTTTGCTCGGACATTTATCCT..................................................................................................2460.3320000000020
............................................................................................TGAGCGTCATAGATGGTTGCAGCATAAAA................................................................2930.3310000001000
...............................................................TATTTTTGCTCGGACATTCT......................................................................................................2060.3320000000020
............................................................................................TGAGCGTCATAGATGGTTGCAGCAT....................................................................2530.3310000001000
.....................................................................................................TAGATGGTTGCAGCATAAA.................................................................1940.2510000001000
.....................................................................................................TAGATGGTTGCAGCATAAATAGG.............................................................2340.2510010000000
........................................................................................................ATGGTTGCAGCATAAATAGAAA...........................................................2240.2510000001000
.....................................................................................................TAGATGGTTGCAGCATAAATCCC.............................................................2340.2510000000010
......................................................................................................AGATGGTTGCAGCATAAATAGAA............................................................2340.2510000001000
.........................................................................................................TGGTTGCAGCATAAATAG..............................................................1840.2510100000000
.....................................................................................................TAGATGGTTGCAGCATAAAGT...............................................................2140.2510000001000
....................................................................................................ATAGATGGTTGCAGCATAAATAG..............................................................2340.2510000000010
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAAA..........................................................2640.2510000001000
.......................................................................................................GATGGTTGCAGCATAAATAGT.............................................................2140.2510000001000
.......................................................................................................GATGGTTGCAGCATAAAA................................................................1840.2510000000010
.....................................................................................................TAGATGGTTGCAGCATAAATAGAAT...........................................................2540.2510000000010
.......................................................................................................GATGGTTGCAGCATAAATAGAA............................................................2240.2510100000000
........................................................................................................ATGGTTGCAGCATAAATAGAA............................................................2140.2510000001000
....................................................................................................ATAGATGGTTGCAGCATAAATAGA.............................................................2440.2510000000010
......................................................................................................AGATGGTTGCAGCATAAATA...............................................................2040.2510000001000
.....................................................................................................TAGATGGTTGCAGCATAAATAGATAA..........................................................2640.2510000000010
....................................................................................................ATAGATGGTTGCAGCATAAA.................................................................2040.2510000001000
..........................................TATTTCATGGGCTTATATTTG..........................................................................................................................2160.1710000000010
.................................................................TTTTTGCTCGGACATTTAT.....................................................................................................1960.1710000001000
..............................................................GTATTTTTGCTCGGACATTTATGTA..................................................................................................2560.1710000000010
..................................................................TTTTGCTCGGACATTTATG....................................................................................................1960.1710000000010
...............................................................TATTTTTGCTCGGACATTTCG.....................................................................................................2160.1710000000010
...................................................................TTTGCTCGGACATTTATGT...................................................................................................1960.1710000000010
................................................................ATTTTTGCTCGGACATTTATGTAA.................................................................................................2460.1710001000000
...............................................................TATTTTTGCTCGGACATTCC......................................................................................................2060.1710000000010
...............................................................TATTTTTGCTCGGACATTTATGTAA.................................................................................................2560.1710000000010
...............................................................TATTTTTGCTCGGACATTTATGTAT.................................................................................................2560.1710000000010
...............................................................TATTTTTGCTCGGACATTTATGTCTT................................................................................................2660.1710000000010
...............................................................TATTTTTGCTCGGACATTTAATC...................................................................................................2360.1710000000010
...............................................................TATTTTTGCTCGGACATTG.......................................................................................................1960.1710000000010
...............................................................TATTTTTGCTCGGAC...........................................................................................................1560.1710000000010
...............................................................TATTTTTGCTCGGACATTTG......................................................................................................2060.1710000000010
................................................................ATTTTTGCTCGGACATTTAA.....................................................................................................2060.1710000000010
................................................................ATTTTTGCTCGGACATTTATGTACAAT..............................................................................................2760.1710000000010
...............................................................TATTTTTGCTCGGACATTTATGTCT.................................................................................................2560.1710000001000
...................................................................TTTGCTCGGACATTTAT.....................................................................................................1760.1710000000010
................................................................ATTTTTGCTCGGACATTTATGAT..................................................................................................2360.1710000000010
................................................................ATTTTTGCTCGGACATTTATT....................................................................................................2160.1710000001000
...............................................................TATTTTTGCTCGGACATTTATGTCA.................................................................................................2560.1710000000010
.................................................................TTTTTGCTCGGACATTTATG....................................................................................................2060.1710000000010
...............................................................TATTTTTGCTCGGACATTTATGTAG.................................................................................................2560.1710000000010
...........................................ATTTCATGGGCTTATATTTG..........................................................................................................................2060.1710000000010
................................................................ATTTTTGCTCGGACATTTATGA...................................................................................................2260.1710000000010
...............................................................TATTTTTGCTCGGACATTTATGAG..................................................................................................2460.1710000000010
..................................................................TTTTGCTCGGACATTTAA.....................................................................................................1870.1410100000000
...............................................................TATTTTTGCTCGGACATTTATCCG..................................................................................................2470.1410000001000
...............................................................TATTTTTGCTCGGACATTTCA.....................................................................................................2170.1410000000010
...............................................................TATTTTTGCTCGGACATTCCC.....................................................................................................2180.1310000000010
...............................................................TATTTTTGCTCGGACATTTTCC....................................................................................................2280.1310000000010
...............................................................TATTTTTGCTCGGACATTTTAA....................................................................................................2290.1110000000010
droPer2
AAATTTTAGGATCGAGTGATTCCGATTCGTTAGGGGAGAATATATTTCATGGGCTTATATTTTTATTTGTACTCAGACATTTATGTACAATTTGAACGTCATAAATGTTTGCAGCATAAATAGAATTATTAGCCACAAAACCAACCATGAGCTCTCCGTTCCGCGGGTGAAAGTGCGCTAAAATGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................................TAAATGTTTGCAGCATAAATAGA.............................................................23162.00620404153
.....................................................................................................TAAATGTTTGCAGCATAAATAG..............................................................22161.00610002059
...............................................................TATTTGTACTCAGACATTTATG....................................................................................................22129.00296210101
...............................................................TATTTGTACTCAGACATTTATGT...................................................................................................2313.003030000
.....................................................................................................TAAATGTTTGCAGCATAAATAGAA............................................................2413.003010002
.....................................................................................................TAAATGTTTGCAGCATAAATAGT.............................................................2312.002000002
.....................................................................................................TAAATGTTTGCAGCATAAATA...............................................................2112.002000002
...............................................................TATTTGTACTCAGACATTTAT.....................................................................................................2112.002010001
.....................................................................................................TAAATGTTTGCAGCATAAATAGAAA...........................................................2511.001000001
................................................................ATTTGTACTCAGACATTTATG....................................................................................................2111.001010000
.....................................................................................................TAAATGTTTGCAGCATAAATAGTCC...........................................................2511.001000100
.....................................................................................................TAAATGTTTGCAGCATAAAT................................................................2011.001000001
.....................................................................................................TAAATGTTTGCAGCATAAATAGATA...........................................................2511.001000001

Generated: 10/20/2015 at 07:12 PM