ID:

dps-mir-2540

 Coordinate:

XL_group1e:8367333-8367441 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTCGCTACAAAGATATGACAACTCAACCAATCAATTAGTGGCCGAATACATGTATATTTCAAATGTTTTTAGTTCTTCAGATCGCCAGGTATTATATGTAATACTTAAAAACCGTGTTATACCGGTCATCTGAAGAATTATTTACCACAGAAAGCAACAAAATCCGTGCCGTGCGGGCTCCTTTGGAGCTAGTGCTTTATTAAGTGGTG

************************************************************....((...(((((((((((((.(((.(((((.(((((..............))))).)))))))).)))))))))))))...))......********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011

testis

 V112

male body		 M040

female body

 GSM444067

head

 SRR902010

ovaries

 M022

male body		 GSM343916

embryo

 SRR902012

CNS imaginal disc

 M059

embryo

 M062

head
..................................................................................................................TGTTATACCGGTCATCTGAAGA......................................................................... 22 0 1 4062.00 4062 3737 96 96 20 29 21 23 22 13 5
..................................................................................................................TGTTATACCGGTCATCTGAAG.......................................................................... 21 0 1 1662.00 1662 1420 122 71 31 5 3 3 5 0 2
..................................................................................................................TGTTATACCGGTCATCTGAAGAA........................................................................ 23 0 1 146.00 146 120 22 1 0 0 3 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATG............................................................................................................... 23 0 1 145.00 145 127 11 1 1 0 3 0 2 0 0
...........................................................................TTCAGATCGCCAGGTATTATAT................................................................................................................ 22 0 1 73.00 73 54 15 0 1 0 0 1 0 0 2
..................................................................................................................TGTTATACCGGTCATCTGAA........................................................................... 20 0 1 67.00 67 61 3 3 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAAA....................................................................... 24 1 1 64.00 64 50 7 5 0 0 2 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGA............................................................................ 19 0 1 34.00 34 14 1 8 11 0 0 0 0 0 0
...................................................................................................................GTTATACCGGTCATCTGAAGA......................................................................... 21 0 1 34.00 34 29 1 2 0 0 0 0 0 1 1
...........................................................................TTCAGATCGCCAGGTATTATATGTAA............................................................................................................ 26 0 1 33.00 33 31 2 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGT......................................................................... 22 1 1 28.00 28 26 0 1 0 0 0 1 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAA.......................................................................... 21 1 1 24.00 24 22 2 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATT............................................................................................................... 23 1 1 14.00 14 9 3 0 0 2 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATC............................................................................................................... 23 1 1 14.00 14 13 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATTTGAAGA......................................................................... 22 1 1 13.00 13 12 0 0 0 0 0 0 0 1 0
...........................................................................TTCAGATCGCCAGGTATTATATGT.............................................................................................................. 24 0 1 13.00 13 13 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATGA.............................................................................................................. 24 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATA................................................................................................................. 21 0 1 10.00 10 6 2 0 1 0 0 0 0 0 1
..................................................................................................................TTTTATACCGGTCATCTGAAGA......................................................................... 22 1 1 7.00 7 2 0 0 0 0 0 0 0 5 0
..................................................................................................................TGTTATACTGGTCATCTGAAGA......................................................................... 22 1 1 7.00 7 6 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATTTGAAG.......................................................................... 21 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
...................................................................................................................GTTATACCGGTCATCTGAAG.......................................................................... 20 0 1 6.00 6 2 0 3 0 0 0 0 0 1 0
...........................................................................TTCAGATCGCCAGGTATTATATGTAAA........................................................................................................... 27 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAT........................................................................ 23 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGTC........................................................................ 23 2 1 5.00 5 4 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGATT....................................................................... 24 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATAA................................................................................................................ 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGCCATCTGAAGA......................................................................... 22 1 1 4.00 4 3 0 1 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAAG....................................................................... 24 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGC......................................................................... 22 1 1 4.00 4 3 1 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATGTA............................................................................................................. 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGCC........................................................................ 23 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATATCGGTCATCTGAAGA......................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
............................................................................TCAGATCGCCAGGTATTATATGTAA............................................................................................................ 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
..................................................................................................................TTTTATACCGGTCATCTGAAG.......................................................................... 21 1 1 3.00 3 0 0 0 0 0 0 0 0 0 3
.................................................................................................................GTGTTATACCGGTCATCTGAAGA......................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATCC.............................................................................................................. 24 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................CGTTATACCGGTCATCTGAAGA......................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.................................................................................................................ATGTTATACCGGTCATCTGAAG.......................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTTATCTGAAGA......................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTAATCTGAAG.......................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATGTC............................................................................................................. 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATATCGGTCATCTGAAGAAAAA..................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................CGTTATACCGGTCATCTGAAG.......................................................................... 21 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..................................................................................................................TCTTATACCGGTCATCTGAAGAA........................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATTT................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAGGA......................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACTGGTCATCTGAAG.......................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGGAGA......................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 1 0 0 0
..................................................................................................................TGCTATACCGGTCATCTGAAGA......................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TTATACCGGTCATCTGAAGA......................................................................... 20 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.................................................................................................................ATGTTATACCGGTCATCTGAAGA......................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................GTTATACCGGTCATCTGAA........................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCCGAAGA......................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATATTGGTCATCTGAAGA......................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTAATCTGAAGA......................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................TGTTTATACCGGTCATCTGAAG.......................................................................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................GTTATACCGGTCATCTGA............................................................................ 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGGATTATATG............................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAAAAA..................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATGTCC............................................................................................................ 26 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAG........................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCAATTGAAGA......................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGCCATCTGAAG.......................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAAAA........................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAACTCTG................................................................... 28 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATATGAAGA......................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTAAAGA......................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCTGTCATCTGAAGA......................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAAT....................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGCTCATCTGAAGA......................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0
...........................................................................TTCAGATCGCCAGGTATTATATGTAATTCCTT...................................................................................................... 32 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATGTCCA........................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................GTTATACCGGTCATCTGAAGC......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAGG.......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTAAACCGGTCATCTGAAG.......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TTTATACCGGTCATCTGAAGA......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAAA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGGTATACCGGTCATCTGAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGCTATACAGGTCATCTGAAG.......................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................TGTTATACCGGTCATCTGAAGTTA....................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................CTATACCGGTCATCTGAAGA......................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAAAA...................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATA............................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCCGTCATCTGA............................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTACACCGGTCATCTGAAG.......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGTCTG...................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATCTTG............................................................................................................ 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAG........................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGAAATACCGGTCATCTGAAGA......................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCAT................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGG......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAAAAGA...................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................GTTATACCGGTCATCTGAAGAA........................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCAACTGAAG.......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TTTTATACCGGTCATCTCAAGA......................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0
...........................................................................TTCAGATCGCCAGGTATTATATGTCCC........................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTTAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAAATCTG................................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TCTTATACCGGTCATCTGAAGA......................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0
...........................................................................TTCAGATCGCCAGGCATTATATT............................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................GTGTTATACCGGTCATCTGAAG.......................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGAATTATATGTAA............................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTGATCTGAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTCATACCGGTCATCTGAAGA......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................CGTTATACCGGTCATCTGAA........................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................TGTGATACCGGTCATCTGAAG.......................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................TGGTATACCGGTCATCTGA............................................................................ 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................GTTATACCGGTCATCTGAAGAC........................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCAGAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGATCTG..................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................TTATACCGGTCATCTGAAG.......................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAGA....................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGCT........................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTAT.................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGATCATCTGAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TCTTATACCGGTCATCTGAA........................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTGTACCGGTCATCTGAAGTA........................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATGCCGGTTATCTGAAGA......................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGCAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTCAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATGCCGGTCATCTGAAGA......................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1
...........................................................................TTCAGATCGCCAGGTATTATATGC.............................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATGTG............................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TATTATACCGGTCATCTGAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCGTCTGAAG.......................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCAGCTGAAG.......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATGAA............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCAGTCATCTGAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGT............................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1
..................................................................................................................TGTTATACCGGTCATCTGAAGTTT....................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTGATCTGAAG.......................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................TGTTATACCGGACATCTGAAGA......................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCACCTGAAGA......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCTCCAGGTATTATATGTAA............................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGAATTCTG................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................ATTTCAGATCGCCAGGTATTATAT................................................................................................................ 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGAATTATATT............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTCAGATCGCCAGGTATTATATGTCTGA.......................................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTGAAGTCC....................................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TGATATACCGGTCATCTGAAGAA........................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATACCGGTCATCTG............................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................TGTTATACCGTTCATCTGAAG.......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGTTATAGCGGTCATGTGGAGA......................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...........................................................................TTCGGATCGCCAGGTATTATATG............................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TGATATACCGGTCATATGAA........................................................................... 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................TTACACCGGTGATCTGATG.......................................................................... 19 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................AGCAACGAAATCCATGCCGGG.................................... 21 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................GCCGTGCTGGCCCCATTGGA...................... 20 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................ACACCGGTGATCTGATGAA........................................................................ 19 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0
.............TTTGACAACTCAACAATTCA................................................................................................................................................................................ 20 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AAGCGATGTTTCTATACTGTTGAGTTGGTTAGTTAATCACCGGCTTATGTACATATAAAGTTTACAAAAATCAAGAAGTCTAGCGGTCCATAATATACATTATGAATTTTTGGCACAATATGGCCAGTAGACTTCTTAATAAATGGTGTCTTTCGTTGTTTTAGGCACGGCACGCCCGAGGAAACCTCGATCACGAAATAATTCACCAC

**********************************************************....((...(((((((((((((.(((.(((((.(((((..............))))).)))))))).)))))))))))))...))......************************************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM444067

head

 M040

female body
.................................................................................................................................................................................GAGGACCCCTCGATCACGAATT.......... 22 3 1 1.00 1 1 0
.................................................................................................................................................................................GAGGAAACCGGGATCACGAATT.......... 22 3 3 0.33 1 1 0
................CTGTTGAGTTGTTAAGTTA.............................................................................................................................................................................. 19 2 5 0.20 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 XL_group1e:8367283-8367491 - dps-mir-2540 Known_mirbase TTCGCTACAA-AGATATGACAACTCAACCAATCAATTAGTGGCCGAATACATGTATATTTCAAATGTTTTTAGTTCTTCAGATCGCCAGGTATTATATGTAATACTTAAAAACCGTGTTATACCGGTCATCTGAAGAATTATTTACCACAGAAAGCAACAAAATCCGTGCCGTGCGGGCTCCTTTGGAGCTAGTGCTTTATTAAGTGGTG
droPer2 scaffold_13:196989-197159 + dpe_82 confident TTCGCTACAAAAGATATGTCAATTCAACCAATCAATTAGTGGCCAAATACATGTATATTTCAAATGTTTTTAGTTCCTTAGATCGCCAGGTATTATATGTTATATTTAAAAACCATGTTATACCGGTCATCTGAAGAATTATTTACCACAGATAACAACAAAATCCTTTCC---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTCGCTACAA-AGATATGACAACTCAACCAATCAATTAGTGGCCGAATACATGTATATTTCAAATGTTTTTAGTTCTTCAGATCGCCAGGTATTATATGTAATACTTAAAAACCGTGTTATACCGGTCATCTGAAGAATTATTTACCACAGAAAGCAACAAAATCCGTGCCGTGCGGGCTCCTTTGGAGCTAGTGCTTTATTAAGTGGTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................TGTTATACCGGTCATCTGAAGA.........................................................................2214062.004062219613523209629373722
...................................................................................................................TGTTATACCGGTCATCTGAAG..........................................................................2111662.00166237102331122514205
...................................................................................................................TGTTATACCGGTCATCTGAAGAA........................................................................231146.001463100002201200
............................................................................TTCAGATCGCCAGGTATTATATG...............................................................................................................231145.001453100011101272
............................................................................TTCAGATCGCCAGGTATTATAT................................................................................................................22173.0073000211150540
...................................................................................................................TGTTATACCGGTCATCTGAA...........................................................................20167.006703000030610
...................................................................................................................TGTTATACCGGTCATCTGAAGAAA.......................................................................24164.006425000070500
...................................................................................................................TGTTATACCGGTCATCTGA............................................................................19134.0034080001110140
....................................................................................................................GTTATACCGGTCATCTGAAGA.........................................................................21134.003402110010290
............................................................................TTCAGATCGCCAGGTATTATATGTAA............................................................................................................26133.003300000020310
...................................................................................................................TGTTATACCGGTCATCTGAAGT.........................................................................22128.002801001000260
...................................................................................................................TGTTATACCGGTCATCTGAAA..........................................................................21124.002400000020220
............................................................................TTCAGATCGCCAGGTATTATATT...............................................................................................................23114.00140000003290
............................................................................TTCAGATCGCCAGGTATTATATC...............................................................................................................23114.001400000010130
............................................................................TTCAGATCGCCAGGTATTATATGT..............................................................................................................24113.001300000000130
............................................................................TTCAGATCGCCAGGTATTATATGA..............................................................................................................24112.001200000000120
............................................................................TTCAGATCGCCAGGTATTATA.................................................................................................................21110.00100001012060
....................................................................................................................GTTATACCGGTCATCTGAAG..........................................................................2016.0060310000020
............................................................................TTCAGATCGCCAGGTATTATATGTAAA...........................................................................................................2716.0060000000060
...................................................................................................................TGTTATACCGGTCATCTGAAGAT........................................................................2315.0050000001040
...................................................................................................................TGTTATACCGGTCATCTGAAGTC........................................................................2315.0050000001040
............................................................................TTCAGATCGCCAGGTATTATAA................................................................................................................2214.0040000000040
...................................................................................................................TGTTATACCGGTCATCTGAAGAAG.......................................................................2414.0040000000040
...................................................................................................................TGTTATACCGGTCATCTGAAGC.........................................................................2214.0040000001030
............................................................................TTCAGATCGCCAGGTATTATATGTA.............................................................................................................2514.0040000000040
...................................................................................................................TGTTATACCGGTCATCTGAAGCC........................................................................2313.0030000000030
.............................................................................TCAGATCGCCAGGTATTATATGTAA............................................................................................................2513.0030000001020
..................................................................................................................GTGTTATACCGGTCATCTGAAGA.........................................................................2313.0030000000030
............................................................................TTCAGATCGCCAGGTATTATATCC..............................................................................................................2413.0030000000030
............................................................................TTCAGATCGCCAGGTATTATATGTC.............................................................................................................2512.0020000000020
.....................................................................................................................TTATACCGGTCATCTGAAGA.........................................................................2012.0020100000010
....................................................................................................................GTTATACCGGTCATCTGAA...........................................................................1912.0020000000020
....................................................................................................................GTTATACCGGTCATCTGA............................................................................1812.0020200000000
............................................................................TTCAGATCGCCAGGTATTATATGTCC............................................................................................................2612.0020000000020
...................................................................................................................TGTTATACCGGTCATCTGAAGAG........................................................................2312.0020000000020
...................................................................................................................TGTTATACCGGTCATCTGAAGAAT.......................................................................2412.0020000000020
............................................................................TTCAGATCGCCAGGTATTATATGTCCA...........................................................................................................2711.0010000000010
....................................................................................................................GTTATACCGGTCATCTGAAGC.........................................................................2111.0010000000010
...................................................................................................................TGTTATACCGGTCATCTGAAGTTA.......................................................................2411.0010000000010
...................................................................................................................TGTTATACCGGTCATCTGAAGAAAA......................................................................2511.0010000000010
............................................................................TTCAGATCGCCAGGTATTATATA...............................................................................................................2311.0010000000010
...................................................................................................................TGTTATACCGGTCATCTGAG...........................................................................2011.0010000000010
...................................................................................................................TGTTATACCGGTCAT................................................................................1511.0010000000010
...................................................................................................................TGTTATACCGGTCATCTGAAGG.........................................................................2211.0010000001000
....................................................................................................................GTTATACCGGTCATCTGAAGAA........................................................................2211.0010100000000
............................................................................TTCAGATCGCCAGGTATTATATGTCCC...........................................................................................................2711.0010000000010
..................................................................................................................GTGTTATACCGGTCATCTGAAG..........................................................................2211.0010100000000
....................................................................................................................GTTATACCGGTCATCTGAAGAC........................................................................2211.0010000001000
.....................................................................................................................TTATACCGGTCATCTGAAG..........................................................................1911.0010000000010
...................................................................................................................TGTTATACCGGTCATCTGAAGAGA.......................................................................2411.0010000000010
...................................................................................................................TGTTATACCGGTCATCTGAAGCT........................................................................2311.0010000000010
............................................................................TTCAGATCGCCAGGTATTAT..................................................................................................................2011.0010000001000
............................................................................TTCAGATCGCCAGGTATTATATGC..............................................................................................................2411.0010000000010
...................................................................................................................TGTTATACCGGTCATCTGT............................................................................1911.0010001000000
...................................................................................................................TGTTATACCGGTCATCTGAAGTCC.......................................................................2411.0010000001000
...................................................................................................................TGTTATACCGGTCATCTG.............................................................................1811.0011000000000
droPer2
TTCGCTACAAAAGATATGTCAATTCAACCAATCAATTAGTGGCCAAATACATGTATATTTCAAATGTTTTTAGTTCCTTAGATCGCCAGGTATTATATGTTATATTTAAAAACCATGTTATACCGGTCATCTGAAGAATTATTTACCACAGATAACAACAAAATCCTTTCC---------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................TGTTATACCGGTCATCTGAAG..........................................................................211165.0016510161436332
...................................................................................................................TGTTATACCGGTCATCTGAAGA.........................................................................221100.0010014122152829
...................................................................................................................TGTTATACCGGTCATCTGA............................................................................19129.002902010170
...................................................................................................................TGTTATACCGGTCATCTGAA...........................................................................20120.00200006113
...................................................................................................................TGTTATACCGGTCATCTGAAGAA........................................................................23119.00190100018
............................................................................CTTAGATCGCCAGGTATTATATG...............................................................................................................2318.008000026
............................................................................CTTAGATCGCCAGGTATTATATGTTA............................................................................................................2615.005000005
...................................................................................................................TGTTATACCGGTCATCTGAAA..........................................................................2113.003000120
.............................................................................TTAGATCGCCAGGTATTATATGT..............................................................................................................2313.003000003
............................................................................CTTAGATCGCCAGGTATTATAT................................................................................................................2213.003000021
...................................................................................................................TGTTATACCGGTCATCTGAAGAAA.......................................................................2412.002010001
............................................................................CTTAGATCGCCAGGTATTATATGT..............................................................................................................2412.002000002
...................................................................................................................TGTTATACCGGTCATCTGAAGAT........................................................................2312.002000101
...................................................................................................................TGTTATACCGGTCATCTGAAGG.........................................................................2212.002200000
...................................................................................................................TGTTATACCGGTCATCTG.............................................................................1812.002000020
....................................................................................................................GTTATACCGGTCATCTGAAGA.........................................................................2112.002020000
...................................................................................................................TGTTATACCGGTCATCTGAAGACA.......................................................................2411.001000001
...................................................................................................................TGTTATACCGGTCATCTGAAC..........................................................................2111.001000010
.............................................................................TTAGATCGCCAGGTATTATATG...............................................................................................................2211.001000001
............................................................................CTTAGATCGCCAGGTATTATATGA..............................................................................................................2411.001000001
...................................................................................................................TGTTATACCGGTCATCTGT............................................................................1911.001000010
...................................................................................................................TGTTATACCGGTCATCTGAT...........................................................................2011.001000010
...................................................................................................................TGTTATACCGGTCATCTGAAGT.........................................................................2211.001000001
............................................................................CTTAGATCGCCAGGTATTAT..................................................................................................................2011.001000010
.....................................................................................................................TTATACCGGTCATCTGAAGA.........................................................................2011.001000001
....................................................................................................................GTTATACCGGTCATCTGAAG..........................................................................2011.001010000

Generated: 10/20/2015 at 07:05 PM