ID:

dps-mir-2524

 Coordinate:

XL_group1e:8376659-8376751 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.5 -33.3 -32.8

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. XL_group1e:8376671-8376692 -
  2. XL_group1e:8377519-8377540 -
  3. dps_3416  XL_group1e:8381434-8381455 -
star
  1. dps_3414  XL_group1e:8373363-8373385 -
  2. XL_group1e:8376708-8376730 -
  3. XL_group1e:8377556-8377578 -
  4. dps_3416  XL_group1e:8381471-8381493 -

Sense Strand Reads

GTACCCATCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATAGAGAGTTATATAGTTTGTAGTTGGCCCGGTTCCCAGCACATGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGCCAATTATTAGCTCAAGACCAGCCGTGTACGAAAGGACCCCGGACGACAATCATTGGAAGTCCGG
********************************************************...((((.(((((((((((((.((.(((.(((((((((((......))))).))).))).))).)).))))))))))))).)))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M022
male body		 M040
female body
 SRR902012
CNS imaginal disc
 GSM444067
head
 M062
head
 SRR902010
ovaries
 GSM343916
embryo
 M059
embryo
.............................................................................................................TATTGTACTGCGACTCGGGCCA.............................................................. 22 0 3 2421.00 7263 6468 366 91 240 36 22 7 13 14 6
.............................................................................................................TATTGTACTGCGACTCGGG................................................................. 19 0 4 2388.50 9554 8860 472 31 115 33 32 4 6 0 1
.............................................................................................................TATTGTACTGCGACTCGGGC................................................................ 20 0 4 1601.75 6407 5757 201 224 146 20 16 13 28 1 1
.............................................................................................................TATTGTACTGCGACTCGGGCC............................................................... 21 0 3 1441.00 4323 3656 137 244 207 21 12 30 6 3 7
.............................................................................................................TATTGTACTGCGACTCGGGCCC.............................................................. 22 1 3 893.33 2680 2362 106 163 28 7 4 10 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCC............................................................. 23 2 3 214.00 642 584 21 29 3 1 1 3 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCT.............................................................. 22 1 3 188.00 564 444 65 30 21 0 3 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGT................................................................ 20 1 4 152.25 609 428 135 16 17 0 3 1 9 0 0
.............................................................................................................TATTGTACTGCGACTCGG.................................................................. 18 0 4 100.50 402 375 1 18 2 3 2 0 1 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCT............................................................... 21 1 4 90.75 363 278 50 19 10 1 3 0 2 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCC............................................................... 20 0 3 90.67 272 211 12 28 18 1 0 2 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCCC............................................................ 24 3 3 76.00 228 208 13 4 1 1 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTT............................................................... 21 2 4 54.50 218 149 53 2 4 0 5 1 4 0 0
..............................................................................................................ATTGTACTGCGACTCGGG................................................................. 18 0 4 52.50 210 201 2 0 7 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTC............................................................... 21 2 4 49.50 198 133 47 14 2 0 1 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGT................................................................. 19 1 4 43.00 172 158 9 1 3 0 1 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGC................................................................ 19 0 4 37.50 150 118 5 6 21 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTT................................................................ 20 3 4 36.75 147 104 35 2 5 0 1 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCA.............................................................. 21 0 3 35.67 107 84 1 0 22 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCC.............................................................. 22 3 4 35.25 141 113 20 2 6 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGA................................................................ 20 1 4 32.00 128 90 29 4 3 0 1 0 0 0 1
.............................................................................................................TATTGTACTGCGACTCGGGCCCT............................................................. 23 2 3 31.33 94 85 4 3 1 0 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTT................................................................ 20 2 4 28.75 115 94 17 1 2 0 0 0 1 0 0
.............................................................................................................TATTGTACTGCGACTCGTT................................................................. 19 2 4 27.75 111 93 6 4 6 1 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCCT............................................................ 24 3 3 25.33 76 71 5 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTC.............................................................. 22 2 4 24.00 96 81 9 4 1 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTT.............................................................. 22 3 4 20.00 80 52 21 2 4 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTC.............................................................. 22 3 4 19.25 77 62 7 2 1 2 1 2 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCC............................................................ 24 3 3 15.33 46 44 0 1 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTT............................................................... 21 3 4 14.25 57 46 11 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGA................................................................. 19 1 4 13.50 54 46 6 1 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTCC............................................................. 23 3 4 13.50 54 45 4 3 0 2 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTT.............................................................. 22 2 4 13.00 52 42 5 2 2 0 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAT............................................................. 23 1 3 12.67 38 30 1 1 6 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTC................................................................ 20 3 4 12.00 48 36 12 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTT............................................................. 23 2 3 11.67 35 32 1 2 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCC.............................................................. 21 1 3 10.00 30 23 1 4 2 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCT.............................................................. 22 3 4 10.00 40 24 12 3 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTTT................................................................. 19 3 4 9.25 37 37 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAA............................................................. 23 0 3 9.00 27 24 1 0 1 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTC............................................................. 23 2 3 8.00 24 19 3 2 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTC............................................................... 21 3 4 8.00 32 28 4 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCG............................................................... 21 1 4 7.50 30 28 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTC................................................................. 19 2 4 7.00 28 22 1 2 3 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGT................................................................ 19 1 4 6.00 24 16 3 0 4 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTA............................................................... 21 2 4 5.75 23 15 7 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGG................................................................ 20 1 4 5.50 22 22 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAA............................................................... 21 2 4 5.25 21 15 5 0 0 0 0 0 1 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCA............................................................. 23 2 3 4.33 13 11 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTTC............................................................. 23 3 4 4.25 17 15 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTA................................................................ 20 2 4 4.00 16 13 3 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCG.............................................................. 22 1 3 4.00 12 9 1 1 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTC................................................................ 20 2 4 4.00 16 8 7 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTA................................................................ 20 3 4 3.75 15 13 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCTC............................................................ 24 3 3 3.67 11 9 1 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTTT............................................................ 24 3 3 3.67 11 7 0 0 4 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTA.............................................................. 22 3 4 3.50 14 12 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCC............................................................... 21 3 4 3.25 13 11 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAC............................................................. 23 1 3 3.00 9 9 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCTT............................................................ 24 3 3 3.00 9 9 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGTT............................................................... 20 2 4 2.75 11 9 1 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATCC........................................................... 25 3 3 2.67 8 7 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAAA.............................................................. 22 3 4 2.50 10 7 2 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCCA............................................................ 24 3 3 2.33 7 7 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCT.............................................................. 21 1 3 2.33 7 5 0 0 2 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTTC............................................................ 24 3 3 2.33 7 7 0 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGC................................................................ 21 0 4 2.25 9 8 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAA................................................................ 20 2 4 2.25 9 5 4 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTTT............................................................. 23 3 4 2.25 9 9 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGCC.............................................................. 22 3 4 2.25 9 9 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTAA................................................................ 20 3 4 2.00 8 5 2 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGC................................................................. 19 1 4 2.00 8 7 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATT............................................................ 24 2 3 2.00 6 5 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGT.................................................................. 18 1 4 2.00 8 6 0 1 0 0 0 1 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCCA.............................................................. 20 0 3 2.00 6 3 0 0 3 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCC............................................................... 19 0 3 2.00 6 1 1 3 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCA.............................................................. 22 3 4 2.00 8 3 4 0 1 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGG................................................................. 20 0 4 2.00 8 8 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCG.............................................................. 22 3 4 1.75 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTA................................................................. 19 2 4 1.75 7 4 2 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAC............................................................... 21 2 4 1.75 7 2 0 5 0 0 0 0 0 0 0
.......................................................................GCCCGGTTCCCAGCACATGTATG................................................................................................... 23 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTA.............................................................. 22 2 4 1.75 7 5 1 0 1 0 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGGGC................................................................ 25 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCT............................................................... 21 3 4 1.75 7 6 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGC............................................................... 21 2 4 1.75 7 6 0 0 0 1 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAAA............................................................ 24 1 3 1.67 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCACC............................................................ 24 2 3 1.67 5 4 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCT............................................................... 20 1 4 1.50 6 3 1 0 2 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCT................................................................ 20 3 4 1.50 6 4 1 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCC................................................................ 20 3 4 1.50 6 2 4 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCC............................................................... 22 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCCC............................................................. 22 2 3 1.33 4 3 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCTA............................................................ 24 3 3 1.33 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAT............................................................... 21 2 4 1.25 5 4 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTA............................................................... 21 3 4 1.25 5 4 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTCT............................................................. 23 3 4 1.25 5 4 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGT................................................................. 18 1 4 1.25 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCG................................................................ 20 3 4 1.25 5 3 2 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGTC............................................................... 20 2 4 1.25 5 0 2 0 3 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATCA........................................................... 25 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACT..................................................................... 15 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCCT.............................................................. 23 1 3 1.00 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGTT................................................................ 19 2 4 1.00 4 2 1 0 1 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCCA.............................................................. 23 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAAT............................................................ 24 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAG............................................................... 21 2 4 1.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTAA.............................................................. 22 3 4 1.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTG................................................................ 20 3 4 1.00 4 2 0 0 1 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCG................................................................... 17 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCAGG................................................................. 19 3 4 1.00 4 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATAA........................................................... 25 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCG............................................................... 21 3 4 1.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATC............................................................ 24 2 3 1.00 3 0 0 2 1 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGG................................................................. 17 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTG.................................................................. 18 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCA............................................................... 21 3 4 0.75 3 2 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCA................................................................ 20 3 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGT............................................................... 21 2 4 0.75 3 2 0 1 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCGGG................................................................. 22 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTG............................................................... 21 2 4 0.75 3 2 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAAA............................................................... 21 3 4 0.75 3 1 2 0 0 0 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGGG................................................................. 24 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTCGG.................................................................. 27 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAC................................................................ 20 2 4 0.75 3 1 0 2 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGCG................................................................. 19 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCTT............................................................... 21 3 4 0.75 3 2 1 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGG.................................................................. 19 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTAA............................................................... 21 3 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGACC.............................................................. 22 3 4 0.75 3 2 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATTA........................................................... 25 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGGGCC............................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCTT............................................................. 22 2 3 0.67 2 1 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCA............................................................ 24 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATT........................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAGT............................................................ 24 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCCC.............................................................. 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATC........................................................... 25 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATTC........................................................... 25 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................TGTACTGCGACTCGGGCC............................................................... 18 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGATT.............................................................. 22 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGAAA................................................................ 20 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.....................................................TTATATAGTTTGTAGTTG.......................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................CATATTGTACTGCGACTCGGGC................................................................ 22 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCT................................................................ 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGACC............................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTGT............................................................. 23 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCG................................................................ 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTTA............................................................. 23 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGTCC.............................................................. 21 3 4 0.50 2 1 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAT................................................................ 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGAA.............................................................. 22 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTCG............................................................. 23 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCCA............................................................... 21 3 4 0.50 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGA............................................................... 21 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTTG................................................................. 19 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTCG................................................................... 26 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGCGC................................................................ 20 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGTTT................................................................ 19 3 4 0.50 2 1 0 0 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCCCC................................................................. 19 3 4 0.50 2 1 0 0 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCCC............................................................... 21 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAAG............................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTCT................................................................. 19 3 4 0.50 2 1 0 1 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCG................................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCGGGC................................................................ 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGAGC................................................................ 20 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTC.................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTA............................................................. 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATTG........................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCT............................................................ 24 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCCAT............................................................. 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................GTACTGCGACTCGGGCCA.............................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCACTG........................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCAA............................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCG........................................................ 28 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATA............................................................ 24 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAAAA........................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCG............................................................. 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................GTACTGCGACTCGGGCCC.............................................................. 18 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCCC.............................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCTTT............................................................ 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCG.............................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCC........................................................ 28 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCGT............................................................. 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCCCC............................................................ 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCG............................................................ 24 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAG............................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGATC.............................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCTC.............................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTCG................................................................. 19 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTCC................................................................. 19 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCGT.............................................................. 22 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGGA............................................................... 20 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCTT.............................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCT................................................................... 17 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGATA............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGATG............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGACA.............................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTTC................................................................. 19 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGAC.............................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGA................................................................ 19 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGTTC............................................................... 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTG............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGAAA............................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTG................................................................. 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTAT.............................................................. 22 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTG.............................................................. 22 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGT................................................................ 21 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................TTAAATATCATATTGTACTGCGAC...................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCCC.................................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCCTT................................................................. 19 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGA.................................................................. 18 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTGG................................................................. 19 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATTATTAGCTCAAGACCAGCCGTGTCCC.................................. 28 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTAT............................................................. 23 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCC................................................................ 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGA................................................................. 20 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTCGGGC................................................................ 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAAT.............................................................. 22 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGAGT................................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGC................................................................ 18 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.......................................................................GCCCGGTTCCCAGCACATGTATGAT................................................................................................. 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTAT............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................GTACTGCGACTCGGGC................................................................ 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGG.................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTT.................................................................. 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTC.................................................................... 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACT..................................................................... 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTAT................................................................ 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGACA............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCCGG................................................................. 19 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACT..................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CATGGGTAGTATGCACTGTAATTCAGGTTAGGCTTGTCCCTTAGTTATCTCTCAATATATCAAACATCAACCGGGCCAAGGGTCGTGTACATACAACTTAATTTATAGTATAACATGACGCTGAGCCCGGTTAATAATCGAGTTCTGGTCGGCACATGCTTTCCTGGGGCCTGCTGTTAGTAACCTTCAGGCC
***********************************************...((((.(((((((((((((.((.(((.(((((((((((......))))).))).))).))).)).))))))))))))).)))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M062
head
 GSM444067
head
 M022
male body		 M059
embryo
 SRR902012
CNS imaginal disc
 GSM343916
embryo
......................................................................CCGGGCCAAGGGTCGTGTACAT..................................................................................................... 22 0 4 1.75 7 7 0 0 0 0 0 0 0
.........................................................................GGCCAAGGGTCGTGTACAT..................................................................................................... 19 0 4 1.75 7 6 1 0 0 0 0 0 0
.......................................................................CGGGCCAAGGGTCGTGTACAT..................................................................................................... 21 0 4 1.50 6 5 0 1 0 0 0 0 0
......................................................................CCGGGCCAAGGGTCGTGTACA...................................................................................................... 21 0 4 1.00 4 2 1 1 0 0 0 0 0
........................................................................GGGCCAAGGGTCGTGTACAT..................................................................................................... 20 0 4 1.00 4 3 0 0 1 0 0 0 0
........................................................................GGGCCAAGGGTCGTGTACA...................................................................................................... 19 0 4 0.75 3 2 0 0 1 0 0 0 0
.....................................................................ACCGGGCCAAGGGTCGTGTACAT..................................................................................................... 23 0 4 0.50 2 0 1 0 0 0 0 0 1
.....................................................................TCCGGGCCAAGGGTCGTGTACAT..................................................................................................... 23 1 4 0.50 2 0 1 0 0 1 0 0 0
.....................................................................ACCGGGCCAAGGGTCGTGTACA...................................................................................................... 22 0 4 0.50 2 1 0 0 0 0 1 0 0
.......................................................................TGGGCCAAGGGTCGTGTACAT..................................................................................................... 21 1 4 0.50 2 2 0 0 0 0 0 0 0
......................................................................CCGGGCCAAGGGTCGTGTAC....................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................GGCCAAGGGTCGTGTACATA.................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................ACCGGGCCAAGGGTCGTGTACATA.................................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................TTGGCCAAGGGTCGTGTACAT..................................................................................................... 21 2 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................CGGGCCAAGGGTCGTGTAC....................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
................................................................................GGTCGTGTACATACAACTTAA............................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................................................................CGAGTTCTGGTCGGCACATGC.................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0
.................................................................ATCAACCGGGCCAAGGGTCGTGTAC....................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0
........................................................................GGGCCAAGGGTCGTGTACATACAAC................................................................................................ 25 0 4 0.25 1 0 0 0 0 0 0 1 0
......................................................................CCGGGCCAAGGGTCGTGTACATA.................................................................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................CCGGGCCAAGGGTCGTGTACATACAACT............................................................................................... 28 0 4 0.25 1 0 1 0 0 0 0 0 0
.....................................................................CCCGGGCCAAGGGTCGTGTACAT..................................................................................................... 23 1 4 0.25 1 0 0 1 0 0 0 0 0
.......................................................................CGGGCCAAGGGTCGTGTACA...................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
mature
  1. XL_group1e:8376671-8376692 -
  2. XL_group1e:8377519-8377540 -
  3. dps_3416  XL_group1e:8381434-8381455 -
star
  1. dps_3414  XL_group1e:8373363-8373385 -
  2. XL_group1e:8376708-8376730 -
  3. XL_group1e:8377556-8377578 -
  4. dps_3416  XL_group1e:8381471-8381493 -

Sense Strand Reads

GTACCCATCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATAGAGAGTTATATAGTTTGTAGTTGGCCCGGTTCCCAGCACATGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGCCAATTATTAGCTCAAGACCAGCCGTGTACGAAAGGACCCCGGACGACAATCATTGGAAGTCCGG
********************************************************...((((.(((((((((((((.((.(((.(((((((((((......))))).))).))).))).)).))))))))))))).)))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M022
male body		 M040
female body
 SRR902012
CNS imaginal disc
 GSM444067
head
 M062
head
 SRR902010
ovaries
 GSM343916
embryo
 M059
embryo
.............................................................................................................TATTGTACTGCGACTCGGGCCA.............................................................. 22 0 3 2421.00 7263 6468 366 91 240 36 22 7 13 14 6
.............................................................................................................TATTGTACTGCGACTCGGG................................................................. 19 0 4 2388.50 9554 8860 472 31 115 33 32 4 6 0 1
.............................................................................................................TATTGTACTGCGACTCGGGC................................................................ 20 0 4 1601.75 6407 5757 201 224 146 20 16 13 28 1 1
.............................................................................................................TATTGTACTGCGACTCGGGCC............................................................... 21 0 3 1441.00 4323 3656 137 244 207 21 12 30 6 3 7
.............................................................................................................TATTGTACTGCGACTCGGGCCC.............................................................. 22 1 3 893.33 2680 2362 106 163 28 7 4 10 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCC............................................................. 23 2 3 214.00 642 584 21 29 3 1 1 3 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCT.............................................................. 22 1 3 188.00 564 444 65 30 21 0 3 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGT................................................................ 20 1 4 152.25 609 428 135 16 17 0 3 1 9 0 0
.............................................................................................................TATTGTACTGCGACTCGG.................................................................. 18 0 4 100.50 402 375 1 18 2 3 2 0 1 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCT............................................................... 21 1 4 90.75 363 278 50 19 10 1 3 0 2 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCC............................................................... 20 0 3 90.67 272 211 12 28 18 1 0 2 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCCC............................................................ 24 3 3 76.00 228 208 13 4 1 1 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTT............................................................... 21 2 4 54.50 218 149 53 2 4 0 5 1 4 0 0
..............................................................................................................ATTGTACTGCGACTCGGG................................................................. 18 0 4 52.50 210 201 2 0 7 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTC............................................................... 21 2 4 49.50 198 133 47 14 2 0 1 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGT................................................................. 19 1 4 43.00 172 158 9 1 3 0 1 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGC................................................................ 19 0 4 37.50 150 118 5 6 21 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTT................................................................ 20 3 4 36.75 147 104 35 2 5 0 1 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCA.............................................................. 21 0 3 35.67 107 84 1 0 22 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCC.............................................................. 22 3 4 35.25 141 113 20 2 6 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGA................................................................ 20 1 4 32.00 128 90 29 4 3 0 1 0 0 0 1
.............................................................................................................TATTGTACTGCGACTCGGGCCCT............................................................. 23 2 3 31.33 94 85 4 3 1 0 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTT................................................................ 20 2 4 28.75 115 94 17 1 2 0 0 0 1 0 0
.............................................................................................................TATTGTACTGCGACTCGTT................................................................. 19 2 4 27.75 111 93 6 4 6 1 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCCT............................................................ 24 3 3 25.33 76 71 5 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTC.............................................................. 22 2 4 24.00 96 81 9 4 1 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTT.............................................................. 22 3 4 20.00 80 52 21 2 4 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTC.............................................................. 22 3 4 19.25 77 62 7 2 1 2 1 2 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCC............................................................ 24 3 3 15.33 46 44 0 1 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTT............................................................... 21 3 4 14.25 57 46 11 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTCC............................................................. 23 3 4 13.50 54 45 4 3 0 2 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGA................................................................. 19 1 4 13.50 54 46 6 1 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTT.............................................................. 22 2 4 13.00 52 42 5 2 2 0 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAT............................................................. 23 1 3 12.67 38 30 1 1 6 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTC................................................................ 20 3 4 12.00 48 36 12 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTT............................................................. 23 2 3 11.67 35 32 1 2 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCT.............................................................. 22 3 4 10.00 40 24 12 3 1 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCC.............................................................. 21 1 3 10.00 30 23 1 4 2 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTTT................................................................. 19 3 4 9.25 37 37 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAA............................................................. 23 0 3 9.00 27 24 1 0 1 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTC............................................................. 23 2 3 8.00 24 19 3 2 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTC............................................................... 21 3 4 8.00 32 28 4 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCG............................................................... 21 1 4 7.50 30 28 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTC................................................................. 19 2 4 7.00 28 22 1 2 3 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGT................................................................ 19 1 4 6.00 24 16 3 0 4 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTA............................................................... 21 2 4 5.75 23 15 7 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGG................................................................ 20 1 4 5.50 22 22 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAA............................................................... 21 2 4 5.25 21 15 5 0 0 0 0 0 1 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCA............................................................. 23 2 3 4.33 13 11 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTTC............................................................. 23 3 4 4.25 17 15 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTC................................................................ 20 2 4 4.00 16 8 7 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTA................................................................ 20 2 4 4.00 16 13 3 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCG.............................................................. 22 1 3 4.00 12 9 1 1 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTA................................................................ 20 3 4 3.75 15 13 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCTC............................................................ 24 3 3 3.67 11 9 1 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTTT............................................................ 24 3 3 3.67 11 7 0 0 4 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTA.............................................................. 22 3 4 3.50 14 12 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCC............................................................... 21 3 4 3.25 13 11 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAC............................................................. 23 1 3 3.00 9 9 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCTT............................................................ 24 3 3 3.00 9 9 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGTT............................................................... 20 2 4 2.75 11 9 1 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATCC........................................................... 25 3 3 2.67 8 7 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAAA.............................................................. 22 3 4 2.50 10 7 2 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCCA............................................................ 24 3 3 2.33 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTTC............................................................ 24 3 3 2.33 7 7 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCT.............................................................. 21 1 3 2.33 7 5 0 0 2 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAA................................................................ 20 2 4 2.25 9 5 4 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGCC.............................................................. 22 3 4 2.25 9 9 0 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGC................................................................ 21 0 4 2.25 9 8 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTTT............................................................. 23 3 4 2.25 9 9 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCCA.............................................................. 20 0 3 2.00 6 3 0 0 3 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGC................................................................. 19 1 4 2.00 8 7 0 1 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGG................................................................. 20 0 4 2.00 8 8 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTAA................................................................ 20 3 4 2.00 8 5 2 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGT.................................................................. 18 1 4 2.00 8 6 0 1 0 0 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCA.............................................................. 22 3 4 2.00 8 3 4 0 1 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCC............................................................... 19 0 3 2.00 6 1 1 3 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATT............................................................ 24 2 3 2.00 6 5 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGC............................................................... 21 2 4 1.75 7 6 0 0 0 1 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGGGC................................................................ 25 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTCG.............................................................. 22 3 4 1.75 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTA................................................................. 19 2 4 1.75 7 4 2 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAC............................................................... 21 2 4 1.75 7 2 0 5 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTA.............................................................. 22 2 4 1.75 7 5 1 0 1 0 0 0 0 0 0
.......................................................................GCCCGGTTCCCAGCACATGTATG................................................................................................... 23 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCT............................................................... 21 3 4 1.75 7 6 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAAA............................................................ 24 1 3 1.67 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCACC............................................................ 24 2 3 1.67 5 4 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCT............................................................... 20 1 4 1.50 6 3 1 0 2 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCC................................................................ 20 3 4 1.50 6 2 4 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCT................................................................ 20 3 4 1.50 6 4 1 0 1 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCC............................................................... 22 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCCC............................................................. 22 2 3 1.33 4 3 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCTA............................................................ 24 3 3 1.33 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTA............................................................... 21 3 4 1.25 5 4 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCG................................................................ 20 3 4 1.25 5 3 2 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGTC............................................................... 20 2 4 1.25 5 0 2 0 3 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAT............................................................... 21 2 4 1.25 5 4 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTCT............................................................. 23 3 4 1.25 5 4 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGT................................................................. 18 1 4 1.25 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAAT............................................................ 24 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCCT.............................................................. 23 1 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTAA.............................................................. 22 3 4 1.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTTG................................................................ 20 3 4 1.00 4 2 0 0 1 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACT..................................................................... 15 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGTT................................................................ 19 2 4 1.00 4 2 1 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATCA........................................................... 25 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCAGG................................................................. 19 3 4 1.00 4 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATAA........................................................... 25 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAG............................................................... 21 2 4 1.00 4 4 0 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCCA.............................................................. 23 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCG............................................................... 21 3 4 1.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCG................................................................... 17 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATC............................................................ 24 2 3 1.00 3 0 0 2 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGT............................................................... 21 2 4 0.75 3 2 0 1 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGG.................................................................. 19 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTCGG.................................................................. 27 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCGGG................................................................. 22 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTG.................................................................. 18 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCTT............................................................... 21 3 4 0.75 3 2 1 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGG................................................................. 17 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGCG................................................................. 19 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTCA................................................................ 20 3 4 0.75 3 3 0 0 0 0 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGGG................................................................. 24 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTCA............................................................... 21 3 4 0.75 3 2 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAAA............................................................... 21 3 4 0.75 3 1 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTAA............................................................... 21 3 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTG............................................................... 21 2 4 0.75 3 2 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGACC.............................................................. 22 3 4 0.75 3 2 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAC................................................................ 20 2 4 0.75 3 1 0 2 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATTA........................................................... 25 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATC........................................................... 25 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAGT............................................................ 24 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCA............................................................ 24 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCCC.............................................................. 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGGGCC............................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCTT............................................................. 22 2 3 0.67 2 1 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATT........................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................TGTACTGCGACTCGGGCC............................................................... 18 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATTC........................................................... 25 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCG................................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGTTT................................................................ 19 3 4 0.50 2 1 0 0 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCG................................................................ 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTC.................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCT................................................................ 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAT................................................................ 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCCA............................................................... 21 3 4 0.50 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGACC............................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTTG................................................................. 19 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTTA............................................................. 23 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTCG................................................................... 26 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGAGC................................................................ 20 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGAA.............................................................. 22 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................CATATTGTACTGCGACTCGGGC................................................................ 22 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCCCC................................................................. 19 3 4 0.50 2 1 0 0 0 0 1 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTGT............................................................. 23 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGCGC................................................................ 20 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGATT.............................................................. 22 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTCG............................................................. 23 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTCT................................................................. 19 3 4 0.50 2 1 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCCC............................................................... 21 3 4 0.50 2 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCGGGC................................................................ 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGTCC.............................................................. 21 3 4 0.50 2 1 0 0 1 0 0 0 0 0 0
.....................................................TTATATAGTTTGTAGTTG.......................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGA............................................................... 21 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGAAA................................................................ 20 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGAAG............................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAG............................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATTG........................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCGT............................................................. 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGCCAT............................................................. 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCG.............................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................GTACTGCGACTCGGGCCC.............................................................. 18 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCG............................................................ 24 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCATA............................................................ 24 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCAA............................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................GTACTGCGACTCGGGCCA.............................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCTTT............................................................ 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCCG............................................................. 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCACTG........................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTCT............................................................ 24 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCTA............................................................. 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCG........................................................ 28 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCCCCC............................................................ 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAAAA........................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGCCC.............................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCC........................................................ 28 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TATCATATTGTACTGCGACTCGG.................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGGAC.............................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTT.................................................................. 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGA................................................................ 19 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGACA.............................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGCC................................................................ 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCTT.............................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACTCCC.................................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTAT.............................................................. 22 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
.................................................................................................................GTACTGCGACTCGGGC................................................................ 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGATA............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGTTG.............................................................. 22 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGATC.............................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGACA............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................TTAAATATCATATTGTACTGCGAC...................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGATG............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTTG............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGGT................................................................ 21 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTTC................................................................. 19 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................ATATTGTACTGCGACTCGGA................................................................. 20 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCGT.............................................................. 22 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGGA............................................................... 20 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCT................................................................... 17 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACT..................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGAGT................................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................TAAATATCATATTGTACTGCGACTCGGGC................................................................ 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGCTAT............................................................. 23 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGGAAT.............................................................. 22 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTGG................................................................. 19 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTCC................................................................. 19 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGAAA............................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGTTC............................................................... 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTC.................................................................... 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................ATTGTACTGCGACTCGGGCTC.............................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCTCG................................................................. 19 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGGTAT............................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TCATATTGTACTGCGACT..................................................................... 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCCTT................................................................. 19 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.......................................................................GCCCGGTTCCCAGCACATGTATGAT................................................................................................. 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCCGG................................................................. 19 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TTGTACTGCGACTCGGGC................................................................ 18 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGA.................................................................. 18 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTAT................................................................ 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TATTGTACTGCGACTCGTG................................................................. 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATTATTAGCTCAAGACCAGCCGTGTCCC.................................. 28 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CATGGGTAGTATGCACTGTAATTCAGGTTAGGCTTGTCCCTTAGTTATCTCTCAATATATCAAACATCAACCGGGCCAAGGGTCGTGTACATACAACTTAATTTATAGTATAACATGACGCTGAGCCCGGTTAATAATCGAGTTCTGGTCGGCACATGCTTTCCTGGGGCCTGCTGTTAGTAACCTTCAGGCC
***********************************************...((((.(((((((((((((.((.(((.(((((((((((......))))).))).))).))).)).))))))))))))).)))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M062
head
 GSM444067
head
 M022
male body		 M059
embryo
 SRR902012
CNS imaginal disc
 GSM343916
embryo
......................................................................CCGGGCCAAGGGTCGTGTACAT..................................................................................................... 22 0 4 1.75 7 7 0 0 0 0 0 0 0
.........................................................................GGCCAAGGGTCGTGTACAT..................................................................................................... 19 0 4 1.75 7 6 1 0 0 0 0 0 0
.......................................................................CGGGCCAAGGGTCGTGTACAT..................................................................................................... 21 0 4 1.50 6 5 0 1 0 0 0 0 0
........................................................................GGGCCAAGGGTCGTGTACAT..................................................................................................... 20 0 4 1.00 4 3 0 0 1 0 0 0 0
......................................................................CCGGGCCAAGGGTCGTGTACA...................................................................................................... 21 0 4 1.00 4 2 1 1 0 0 0 0 0
........................................................................GGGCCAAGGGTCGTGTACA...................................................................................................... 19 0 4 0.75 3 2 0 0 1 0 0 0 0
.....................................................................TCCGGGCCAAGGGTCGTGTACAT..................................................................................................... 23 1 4 0.50 2 0 1 0 0 1 0 0 0
.....................................................................ACCGGGCCAAGGGTCGTGTACA...................................................................................................... 22 0 4 0.50 2 1 0 0 0 0 1 0 0
.......................................................................TGGGCCAAGGGTCGTGTACAT..................................................................................................... 21 1 4 0.50 2 2 0 0 0 0 0 0 0
.....................................................................ACCGGGCCAAGGGTCGTGTACAT..................................................................................................... 23 0 4 0.50 2 0 1 0 0 0 0 0 1
.................................................................ATCAACCGGGCCAAGGGTCGTGTAC....................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................CCGGGCCAAGGGTCGTGTACATACAACT............................................................................................... 28 0 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................CGGGCCAAGGGTCGTGTACA...................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................GGCCAAGGGTCGTGTACATA.................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
........................................................................GGGCCAAGGGTCGTGTACATACAAC................................................................................................ 25 0 4 0.25 1 0 0 0 0 0 0 1 0
................................................................................GGTCGTGTACATACAACTTAA............................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................TTGGCCAAGGGTCGTGTACAT..................................................................................................... 21 2 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................CCGGGCCAAGGGTCGTGTAC....................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................CGGGCCAAGGGTCGTGTAC....................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................ACCGGGCCAAGGGTCGTGTACATA.................................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0
.....................................................................CCCGGGCCAAGGGTCGTGTACAT..................................................................................................... 23 1 4 0.25 1 0 0 1 0 0 0 0 0
..........................................................................................................................................CGAGTTCTGGTCGGCACATGC.................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................CCGGGCCAAGGGTCGTGTACATA.................................................................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:8376609-8376801 - dps-miR-2524 GTACCCATCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATAGAGAG--TTATATAGTTTGTAGTTGGCCCGGTTCCCAGCACATGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGCCAATTATTAGCTCAAGACCAGCCGTGTACGAAAGGACCCCGGACGACAATCATTGGAAGTCCGG
droPer2 scaffold_13:190913-191104 + dpe_313 GTCTCC-TCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATCGAGAG--TTATATAGTTTATAGTTGGCCCGGTTCCCAGCACCTGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGTCAATTATTAGCTCAAGACCAGCCGTGGGCGAAAAGACCCCGGAGGACAATCATTGGAAGTCCGG
droVir3 scaffold_13050:2284226-2284244 - GCACCA-ATATGTGTGAGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:7564882-7564926 - ATG---------------------------------------------------------------------------------------TGTGTGTGAAATTAAATATTAGATTGAACTGAGAAGCAGTCC---------------------------------------------------------------
droBip1 scf7180000396640:1829192-1829258 - TTACCCATAATAAAATATGCTAAATACAACTCAGACAGGAATGTAATAAAAAATATTATATAGCCTG--------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302250:78103-78145 - TT------------------------------------------------------------------------------------------------GAATTATATATTGCACCGTACTGGGGCTTAAGCAAACCATT--------------------------------------------------------
dm3 chrX:14718607-14718643 - TTCTC-------------------------------------------------------------------------------AATACATGTATATAAAATTTAATATTTTATTG-------------------------------------------------------------------------------
droYak3 X:10525263-10525298 - GAA--------------------------------------ATCGATAGAGAG--CTATATGGTATATGGTATGCC-----------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTACCCATCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATAGAGAG--TTATATAGTTTGTAGTTGGCCCGGTTCCCAGCACATGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGCCAATTATTAGCTCAAGACCAGCCGTGTACGAAAGGACCCCGGACGACAATCATTGGAAGTCCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................TATTGTACTGCGACTCGGGCCA..............................................................2232421.0072639124067142236613646836
...............................................................................................................TATTGTACTGCGACTCGGG.................................................................1942388.50955431115140324726886033
...............................................................................................................TATTGTACTGCGACTCGGGC................................................................2041601.75640722414611311620128575720
...............................................................................................................TATTGTACTGCGACTCGGGCC...............................................................2131441.0043232442077303121376365621
...............................................................................................................TATTGTACTGCGACTCGGGCCC..............................................................223893.3326801632801004106023627
...............................................................................................................TATTGTACTGCGACTCGGGCCCC.............................................................233214.0064229303012105841
...............................................................................................................TATTGTACTGCGACTCGGGCCT..............................................................223188.00564302101036504440
...............................................................................................................TATTGTACTGCGACTCGGGT................................................................204152.256091617010313594280
...............................................................................................................TATTGTACTGCGACTCGG..................................................................184100.504021820002113753
...............................................................................................................TATTGTACTGCGACTCGGGCT...............................................................21490.75363191000035022781
................................................................................................................ATTGTACTGCGACTCGGGCC...............................................................20390.67272281802001202111
...............................................................................................................TATTGTACTGCGACTCGGGCCCCC............................................................24376.002284101001302081
...............................................................................................................TATTGTACTGCGACTCGGGTT...............................................................21454.502182401055341490
................................................................................................................ATTGTACTGCGACTCGGG.................................................................18452.50210070000202010
...............................................................................................................TATTGTACTGCGACTCGGGTC...............................................................21449.5019814201014701330
...............................................................................................................TATTGTACTGCGACTCGGT.................................................................19443.00172130001901580
................................................................................................................ATTGTACTGCGACTCGGGC................................................................19437.501506210000501180
...............................................................................................................TATTGTACTGCGACTCGTTT................................................................20436.751472500013501040
................................................................................................................ATTGTACTGCGACTCGGGCCA..............................................................21335.67107022000010840
...............................................................................................................TATTGTACTGCGACTCGGGTCC..............................................................22435.251412600002001130
...............................................................................................................TATTGTACTGCGACTCGGGA................................................................20432.00128431001290900
...............................................................................................................TATTGTACTGCGACTCGGGCCCT.............................................................23331.339431010040850
...............................................................................................................TATTGTACTGCGACTCGGTT................................................................20428.75115120000171940
...............................................................................................................TATTGTACTGCGACTCGTT.................................................................19427.7511146000160931
...............................................................................................................TATTGTACTGCGACTCGGGCCCCT............................................................24325.337600000050710
...............................................................................................................TATTGTACTGCGACTCGGGCTC..............................................................22424.009641000190810
...............................................................................................................TATTGTACTGCGACTCGGGTTT..............................................................22420.0080240001210520
...............................................................................................................TATTGTACTGCGACTCGGGTTC..............................................................22419.257721020170622
...............................................................................................................TATTGTACTGCGACTCGGGCCTCC............................................................24315.334611000000440
...............................................................................................................TATTGTACTGCGACTCGGTTT...............................................................21414.2557000000110460
...............................................................................................................TATTGTACTGCGACTCGGGCTCC.............................................................23413.505430000040452
...............................................................................................................TATTGTACTGCGACTCGGA.................................................................19413.505410000160460
...............................................................................................................TATTGTACTGCGACTCGGGCTT..............................................................22413.005222010050420
...............................................................................................................TATTGTACTGCGACTCGGGCCAT.............................................................23312.673816000010300
...............................................................................................................TATTGTACTGCGACTCGTTC................................................................20412.0048000000120360
...............................................................................................................TATTGTACTGCGACTCGGGCCTT.............................................................23311.673520000010320
...............................................................................................................TATTGTACTGCGACTCGGGTCT..............................................................22410.0040310000120240
................................................................................................................ATTGTACTGCGACTCGGGCCC..............................................................21310.003042000010230
...............................................................................................................TATTGTACTGCGACTCTTT.................................................................1949.253700000000370
...............................................................................................................TATTGTACTGCGACTCGGGCCAA.............................................................2339.002701000110240
...............................................................................................................TATTGTACTGCGACTCGGGCCTC.............................................................2338.002420000030190
...............................................................................................................TATTGTACTGCGACTCGGTTC...............................................................2148.003200000040280
...............................................................................................................TATTGTACTGCGACTCGGGCG...............................................................2147.503000000020280
...............................................................................................................TATTGTACTGCGACTCGTC.................................................................1947.002823000010220
................................................................................................................ATTGTACTGCGACTCGGGT................................................................1946.002404000130160
...............................................................................................................TATTGTACTGCGACTCGGGTA...............................................................2145.752301000070150
...............................................................................................................TATTGTACTGCGACTCGGGG................................................................2045.502200000000220
...............................................................................................................TATTGTACTGCGACTCGGGAA...............................................................2145.252100000051150
...............................................................................................................TATTGTACTGCGACTCGGGCCCA.............................................................2334.331300000020110
...............................................................................................................TATTGTACTGCGACTCGGGCTTC.............................................................2344.251700000020150
...............................................................................................................TATTGTACTGCGACTCGGTC................................................................2044.00160100007080
...............................................................................................................TATTGTACTGCGACTCGGTA................................................................2044.001600000030130
...............................................................................................................TATTGTACTGCGACTCGGGCCG..............................................................2234.00121100001090
...............................................................................................................TATTGTACTGCGACTCGTTA................................................................2043.751500000020130
...............................................................................................................TATTGTACTGCGACTCGGGCCCTC............................................................2433.67110100001090
...............................................................................................................TATTGTACTGCGACTCGGGCCTTT............................................................2433.67110400000070
...............................................................................................................TATTGTACTGCGACTCGGGTTA..............................................................2243.501400000020120
...............................................................................................................TATTGTACTGCGACTCGGTCC...............................................................2143.251300000020110
...............................................................................................................TATTGTACTGCGACTCGGGCCAC.............................................................2333.0090000000090
...............................................................................................................TATTGTACTGCGACTCGGGCCCTT............................................................2433.0090000000090
................................................................................................................ATTGTACTGCGACTCGGGTT...............................................................2042.75110100001090
...............................................................................................................TATTGTACTGCGACTCGGGCCATCC...........................................................2532.6781000000070
...............................................................................................................TATTGTACTGCGACTCGGGAAA..............................................................2242.50100100002070
...............................................................................................................TATTGTACTGCGACTCGGGCCCCA............................................................2432.3370000000070
...............................................................................................................TATTGTACTGCGACTCGGGCCTTC............................................................2432.3370000000070
................................................................................................................ATTGTACTGCGACTCGGGCCT..............................................................2132.3370200000050
...............................................................................................................TATTGTACTGCGACTCGGAA................................................................2042.2590000004050
...............................................................................................................TATTGTACTGCGACTCGGGGCC..............................................................2242.2590000000090
..............................................................................................................ATATTGTACTGCGACTCGGGC................................................................2142.2590100000080
...............................................................................................................TATTGTACTGCGACTCGGGCTTT.............................................................2342.2590000000090
.................................................................................................................TTGTACTGCGACTCGGGCCA..............................................................2032.0060300000030
...............................................................................................................TATTGTACTGCGACTCGGC.................................................................1942.0081000000070
..............................................................................................................ATATTGTACTGCGACTCGGG.................................................................2042.0080000000080
...............................................................................................................TATTGTACTGCGACTCGTAA................................................................2042.0081000002050
...............................................................................................................TATTGTACTGCGACTCGT..................................................................1842.0081001000060
...............................................................................................................TATTGTACTGCGACTCGGGTCA..............................................................2242.0080100004030
.................................................................................................................TTGTACTGCGACTCGGGCC...............................................................1932.0063100001010
...............................................................................................................TATTGTACTGCGACTCGGGCCATT............................................................2432.0060100000050
...............................................................................................................TATTGTACTGCGACTCGGGGC...............................................................2141.7570000000061
..........................................................................................................TATCATATTGTACTGCGACTCGGGC................................................................2541.7570000000070
...............................................................................................................TATTGTACTGCGACTCGGGTCG..............................................................2241.7570000000070
...............................................................................................................TATTGTACTGCGACTCGTA.................................................................1941.7571000002040
...............................................................................................................TATTGTACTGCGACTCGGGAC...............................................................2141.7575000000020
...............................................................................................................TATTGTACTGCGACTCGGGCTA..............................................................2241.7570100001050
.........................................................................GCCCGGTTCCCAGCACATGTATG...................................................................................................2341.7570000000070
...............................................................................................................TATTGTACTGCGACTCGGTCT...............................................................2141.7570000001060
...............................................................................................................TATTGTACTGCGACTCGGGCCAAA............................................................2431.6750000000050
...............................................................................................................TATTGTACTGCGACTCGGGCCACC............................................................2431.6750000001040
................................................................................................................ATTGTACTGCGACTCGGGCT...............................................................2041.5060200001030
...............................................................................................................TATTGTACTGCGACTCGTCC................................................................2041.5060000004020
...............................................................................................................TATTGTACTGCGACTCGTCT................................................................2041.5060100001040
..............................................................................................................ATATTGTACTGCGACTCGGGCC...............................................................2231.3340000000040
................................................................................................................ATTGTACTGCGACTCGGGCCCC.............................................................2231.3341000000030
...............................................................................................................TATTGTACTGCGACTCGGGCCCTA............................................................2431.3340000000040
...............................................................................................................TATTGTACTGCGACTCGGTTA...............................................................2141.2550000001040
...............................................................................................................TATTGTACTGCGACTCGTCG................................................................2041.2550000002030
................................................................................................................ATTGTACTGCGACTCGGGTC...............................................................2041.2550300002000
...............................................................................................................TATTGTACTGCGACTCGGGAT...............................................................2141.2550000001040
...............................................................................................................TATTGTACTGCGACTCGGGCTCT.............................................................2341.2550000001040
................................................................................................................ATTGTACTGCGACTCGGT.................................................................1841.2550000000050
...............................................................................................................TATTGTACTGCGACTCGGGCCAAT............................................................2431.0030000001020
..............................................................................................................ATATTGTACTGCGACTCGGGCCT..............................................................2331.0030000000030
...............................................................................................................TATTGTACTGCGACTCGGGTAA..............................................................2241.0040000000040
...............................................................................................................TATTGTACTGCGACTCGTTG................................................................2041.0040100010020
...............................................................................................................TATTGTACTGCGACT.....................................................................1541.0040000000040
................................................................................................................ATTGTACTGCGACTCGGTT................................................................1941.0040100001020
...............................................................................................................TATTGTACTGCGACTCGGGCCATCA...........................................................2531.0030000000030
...............................................................................................................TATTGTACTGCGACTCAGG.................................................................1941.0040000002020
...............................................................................................................TATTGTACTGCGACTCGGGCCATAA...........................................................2531.0030000000030
...............................................................................................................TATTGTACTGCGACTCGGGAG...............................................................2141.0040000000040
..............................................................................................................ATATTGTACTGCGACTCGGGCCA.......................

Re-alignment of all predicted orthologs

----------------------
Species Coordinate ID Alignment
dp5 XL_group1e:8376609-8376801 - dps-miR-2524 GTACCCATCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATAGAGAG--TTATATAGTTTGTAGTTGGCCCGGTTCCCAGCACATGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGCCAATTATTAGCTCAAGACCAGCCGTGTACGAAAGGACCCCGGACGACAATCATTGGAAGTCCGG
droPer2 scaffold_13:190913-191104 + dpe_313 GTCTCC-TCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATCGAGAG--TTATATAGTTTATAGTTGGCCCGGTTCCCAGCACCTGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGTCAATTATTAGCTCAAGACCAGCCGTGGGCGAAAAGACCCCGGAGGACAATCATTGGAAGTCCGG
droVir3 scaffold_13050:2284226-2284244 - GCACCA-ATATGTGTGAGAT---------------------------------------------------------------------------------------------------.......................................2331.0030000000030
...............................................................................................................TATTGTACTGCGACTCGGTCG...............................................................2141.0040000000040
...............................................................................................................TATTGTACTGCGACTCG...................................................................1741.0040000000040
...............................................................................................................TATTGTACTGCGACTCGGGCCATC............................................................2431.0032100000000
...............................................................................................................TATTGTACTGCGACTCGGGGT...............................................................2140.7531000000020
..............................................................................................................ATATTGTACTGCGACTCGG..................................................................1940.7530000000030
......................................................................................................TAAATATCATATTGTACTGCGACTCGG..................................................................2740.7530000000030
............................................................................................................TCATATTGTACTGCGACTCGGG.................................................................2240.7530000000030
...............................................................................................................TATTGTACTGCGACTCTG..................................................................1840.7530000000030
...............................................................................................................TATTGTACTGCGACTCGGCTT...............................................................2140.7530000001020
.................................................................................................................TTGTACTGCGACTCGGG.................................................................1740.7530000000030
...............................................................................................................TATTGTACTGCGACTCGCG.................................................................1940.7530000000030
...............................................................................................................TATTGTACTGCGACTCGTCA................................................................2040.7530000000030
..........................................................................................................TATCATATTGTACTGCGACTCGGG.................................................................2440.7530000000030
...............................................................................................................TATTGTACTGCGACTCGGTCA...............................................................2140.7530000001020
...............................................................................................................TATTGTACTGCGACTCGGAAA...............................................................2140.7530000002010
...............................................................................................................TATTGTACTGCGACTCGGTAA...............................................................2140.7530000000030
...............................................................................................................TATTGTACTGCGACTCGGGTG...............................................................2140.7530100000020
...............................................................................................................TATTGTACTGCGACTCGGGACC..............................................................2240.7531000000020
...............................................................................................................TATTGTACTGCGACTCGGAC................................................................2040.7532000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATTA...........................................................2530.6720000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCAATC...........................................................2530.6720000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCAGT............................................................2430.6720000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCTCA............................................................2430.6720000000020
.................................................................................................................TTGTACTGCGACTCGGGCCC..............................................................2030.6720000000020
..........................................................................................................TATCATATTGTACTGCGACTCGGGCC...............................................................2630.6720000000020
................................................................................................................ATTGTACTGCGACTCGGGCCTT.............................................................2230.6720100000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAATT...........................................................2530.6720000000020
..................................................................................................................TGTACTGCGACTCGGGCC...............................................................1830.6721000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATTC...........................................................2530.6720000000020
............................................................................................................TCATATTGTACTGCGACTCG...................................................................2040.5020000000020
................................................................................................................ATTGTACTGCGACTCGTTT................................................................1940.5020000010010
...............................................................................................................TATTGTACTGCGACTCGGCG................................................................2040.5020000000020
......................................................................................................TAAATATCATATTGTACTGCGACTC....................................................................2540.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGCT................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGAT................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGCCA...............................................................2140.5020000002000
...............................................................................................................TATTGTACTGCGACTCGGACC...............................................................2140.5020000000020
...............................................................................................................TATTGTACTGCGACTCTTG.................................................................1940.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGGCTTA.............................................................2340.5020000001010
......................................................................----------------------------------------------------------------------------
droMoj3 scaffold_6473:7564882-7564926 - ATG---------------------------------------------------------------------------------------TGTGTGTGAAATTAAATATTAGATTGAACTGAGAAGCAGTCC-----------------------------------------AGC................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGGGAA..............................................................2240.5020000000020
.............................................................................................................CATATTGTACTGCGACTCGGGC................................................................2240.5020000000020
...............................................................................................................TATTGTACTGCGACTCCCC.................................................................1940.5020000010010
...............................................................................................................TATTGTACTGCGACTCGGGCTGT.............................................................2340.5020000000020
...............................................................................................................TATTGTACTGCGACTCGCGC................................................................2040.5020000001010
...............................................................................................................TATTGTACTGCGACTCGGGATT..............................................................2240.5020000001010
...............................................................................................................TATTGTACTGCGACTCGGGCTCG.............................................................2340.5020000000020
...............................................................................................................TATTGTACTGCGACTCTCT.................................................................1940.5021000000010
...............................................................................................................TATTGTACTGCGACTCGGCCC...............................................................2140.5020000001010
............................................................................................................TCATATTGTACTGCGACTCGGGC................................................................2340.5020000000020
................................................................................................................ATTGTACTGCGACTCGGGTCC..............................................................2140.5020100000010
.......................................................TTATATAGTTTGTAGTTG..........................................................................................................................1820.5010000000010
...............................................................................................................TATTGTACTGCGACTCGGGGA...............................................................2140.5020000000020
...............................................................................................................TATTGTACTGCGACTCGAAA................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGAAG...............................................................2140.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCAG.............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATTG...........................................................2530.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCGT.............................................................2330.3310000000010
.................................................................................................................TTGTACTGCGACTCGGGCCAT.............................................................2130.3310100000000
................................................................................................................ATTGTACTGCGACTCGGGCCG..............................................................2130.3310000000010
...................................................................................................................GTACTGCGACTCGGGCCC..............................................................1830.3310001000000
...............................................................................................................TATTGTACTGCGACTCGGGCCTCG............................................................2430.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATA............................................................2430.3310000000010
................................................................................................................ATTGTACTGCGACTCGGGCCAA.............................................................2230.3310000000010
...................................................................................................................GTACTGCGACTCGGGCCA..............................................................1830.3310000000010
................................................................................................................ATTGTACTGCGACTCGGGCCTTT............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCCG.............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCACTG...........................................................2530.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCTCT............................................................2430.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCTA.............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCG........................................................2830.3310000000010
................................................................................................................ATTGTACTGCGACTCGGGCCCCC............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAAAA...........................................................2530.3310000000010
..............................................................................................................ATATTGTACTGCGACTCGGGCCC..............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCC........................................................2830.3310000000010
..........................................................................................................TATCATATTGTACTGCGACTCGG..................................................................2340.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGGAC..............................................................2240.251000000
droBip1 scf7180000396640:1829192-1829258 - TTACCCATAATAAAATATGCTAAATACAACTCAGACAGGAATGTAATAAAAAATATTATATAGCCTG--------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302250:78103-78145 - TT------------------------------------------------TT..................................................................1840.2510000000010
................................................................................................................ATTGTACTGCGACTCGGGA................................................................1940.2510000001000
...............................................................................................................TATTGTACTGCGACTCGGGACA..............................................................2240.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGCC................................................................2040.2510000000010
................................................................................................................ATTGTACTGCGACTCGGGCTT..............................................................2140.2510000000010
............................................................................................................TCATATTGTACTGCGACTCCC..................................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGTAT..............................................................2240.2510000010000
...................................................................................................................GTACTGCGACTCGGGC................................................................1640.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGATA...............................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGTTG..............................................................2240.2510100000000
...............................................................................................................TATTGTACTGCGACTCGGGATC..............................................................2240.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGACA...............................................................2140.2510000000010
.....................................................................................................TTAAATATCATATTGTACTGCGAC......................................................................2440.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGATG...............................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGTTG...............................................................2140.2510000000010
..............................................................................................................ATATTGTACTGCGACTCGGGT................................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCTTC.................................................................1940.2510000010000
..............................................................................................................ATATTGTACTGCGACTCGGA.................................................................2040.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGCGT..............................................................2240.2510000001000y">------------------------------------------------GAATTATATATTGCACCGTACTGGGGCTTAAGCAAACCATT--------------------------------------------------------
dm3 chrX:14718607-14718643 - TTCTC-------------------------------------------------------------------------------AATACATGTATATAAAATTTAATATTTTATTG-----
................................................................................................................ATTGTACTGCGACTCGGGGA...............................................................2040.2511000000000
...............................................................................................................TATTGTACTGCGACTCT...................................................................1740.2510000000010
......................................................................................................TAAATATCATATTGTACTGCGACT.....................................................................2440.2510000000010
...............................................................................................................TATTGTACTGCGACTCGAGT................................................................2040.2510000000010
......................................................................................................TAAATATCATATTGTACTGCGACTCGGGC................................................................2940.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGCTAT.............................................................2340.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGAAT..............................................................2240.2510000001000
...............................................................................................................TATTGTACTGCGACTCTGG.................................................................1940.2510000000010
...............................................................................................................TATTGTACTGCGACTCTCC.................................................................1940.2511000000000
................................................................................................................ATTGTACTGCGACTCGGAAA...............................................................2040.2510000001000
................................................................................................................ATTGTACTGCGACTCGGTTC...............................................................2040.2511000000000
...............................................................................................................TATTGTACTGCGACTC....................................................................1640.2510000000010
................................................................................................................ATTGTACTGCGACTCGGGCTC..............................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCTCG.................................................................1940.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGTAT...............................................................2140.2510000000010
............................................................................................................TCATATTGTACTGCGACT.....................................................................1840.2511000000000
...............................................................................................................TATTGTACTGCGACTCCTT.................................................................1940.2511000000000
.........................................................................GCCCGGTTCCCAGCACATGTATGAT.................................................................................................2540.2510000000010
...............................................................................................................TATTGTACTGCGACTCCGG.................................................................1940.2510000001000
.................................................................................................................TTGTACTGCGACTCGGGC................................................................1840.2510100000000
...............................................................................................................TATTGTACTGCGACTCGA..................................................................1840.2511000000000
...............................................................................................................TATTGTACTGCGACTCGTAT................................................................2040.2510000001000
...............................................................................................................TATTGTACTGCGACTCGTG.................................................................1940.2510000000010
.....................................................................................................................................ATTATTAGCTCAAGACCAGCCGTGTCCC..................................2840.2510000001000
droPer2
GTCTCC-TCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATCGAGAG--TTATATAGTTTATAGTTGGCCCGGTTCCCAGCACCTGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGTCAATTATTAGCTCAAGACCAGCCGTGGGCGAAAAGACCCCGGAGGACAATCATTGGAAGTCCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................TATTGTACTGCGACTCGGGTCA..............................................................221886.00886440121223795
...............................................................................................................TATTGTACTGCGACTCGGGTCT..............................................................221106.0010601110103
...............................................................................................................TATTGTACTGCGACTCGGGTC...............................................................21191.009111323765
...............................................................................................................TATTGTACTGCGACTCGGGTCC..............................................................22151.00512101047
...............................................................................................................TATTGTACTGCGACTCGGGT................................................................20132.00320200030
...............................................................................................................TATTGTACTGCGACTCGGGCCC..............................................................2219.009900000
................................................................................................................ATTGTACTGCGACTCGGGTCA..............................................................2118.008070001
...............................................................................................................TATTGTACTGCGACTCGGGTT...............................................................2116.006000006
...............................................................................................................TATTGTACTGCGACTCGGGCC...............................................................2115.005300002
...............................................................................................................TATTGTACTGCGACTCGGGTTT..............................................................2215.005000005
...............................................................................................................TATTGTACTGCGACTCGGGCCA..............................................................2214.004300001
...............................................................................................................TATTGTACTGCGACTCGGTT--------------------------------------------------------------------------
droYak3 X:10525263-10525298 - GAA--------------------------------------ATCGATAGAGAG--CTATATGGTATATGGTATGCC--------------------------------------------------------------------------------------------------------------T...............................................................2114.004000004
...............................................................................................................TATTGTACTGCGACTCGGGTTC..............................................................2214.004000004
...............................................................................................................TATTGTACTGCGACTCGGG.................................................................1914.004100003
...............................................................................................................TATTGTACTGCGACTCGGGTCAA.............................................................2313.003010002
...............................................................................................................TATTGTACTGCGACTCGGGC................................................................2013.003300000
...............................................................................................................TATTGTACTGCGACTCGGGCAA..............................................................2213.003200001
...............................................................................................................TATTGTACTGCGACTCGTTT................................................................2013.003000003
..................................................................................................................TGTACTGCGACTCGGGTCA..............................................................1913.003000003
...............................................................................................................TATTGTACTGCGACTCGGTT................................................................2013.003000003
...............................................................................................................TATTGTACTGCGACTCGGGCA...............................................................2113.003300000
...............................................................................................................TATTGTACTGCGACTCGGGTTTT.............................................................2313.003000003
................................................................................................................ATTGTACTGCGACTCGGGCC...............................................................2012.002200000
...............................................................................................................TATTGTACTGCGACTCGTT.................................................................1912.002000002
...............................................................................................................TATTGTACTGCGACTCGGGTCTT.............................................................2312.002000002
...............................................................................................................TATTGTACTGCGACTCGGGCCT..............................................................2212.002100001
...............................................................................................................TATTGTACTGCGACTCGTTC................................................................2012.002000002
...............................................................................................................TATTGTACTGCGACTCGGGTCCC.............................................................2312.002000002
...............................................................................................................TATTGTACTGCGACTCGGGCT...............................................................2112.002200000
...............................................................................................................TATTGTACTGCGACTCGGGGCA..............................................................2211.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTTAA.............................................................2311.001010000
...............................................................................................................TATTGTACTGCGACTCTTT.................................................................1911.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTCCCT............................................................2411.001000001
.........lass="mismatchAny">---------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTACCCATCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATAGAGAG--TTATATAGTTTGTAGTTGGCCCGGTTCCCAGCACATGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGCCAATTATTAGCTCAAGACCAGCCGTGTACGAAAGGACCCCGGACGACAATCATTGGAAGTCCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................TATTGTACTGCGACTCGGGCCA..............................................................2232421.0072639124067142236613646836
...............................................................................................................TATTGTACTGCGACTCGGG.................................................................1942388.50955431115140324726886033
...............................................................................................................TATTGTACTGCGACTCGGGC................................................................2041601.75640722414611311620128575720
...............................................................................................................TATTGTACTGCGACTCGGGCC...............................................................2131441.0043232442077303121376365621
...............................................................................................................TATTGTACTGCGACTCGGGCCC..............................................................223893.3326801632801004106023627
...............................................................................................................TATTGTACTGCGACTCGGGCCCC.............................................................233214.0064229303012105841
...............................................................................................................TATTGTACTGCGACTCGGGCCT..............................................................223188.00564302101036504440
...............................................................................................................TATTGTACTGCGACTCGGGT................................................................204152.256091617010313594280
...............................................................................................................TATTGTACTGCGACTCGG..................................................................184100.504021820002113753
...............................................................................................................TATTGTACTGCGACTCGGGCT...............................................................21490.75363191000035022781
................................................................................................................ATTGTACTGCGACTCGGGCC...............................................................20390.67272281802001202111
...............................................................................................................TATTGTACTGCGACTCGGGCCCCC............................................................24376.002284101001302081
...............................................................................................................TATTGTACTGCGACTCGGGTT...............................................................21454.502182401055341490
................................................................................................................ATTGTACTGCGACTCGGG.................................................................18452.502100700AA..............................................................2211.001000001
................................................................................................................ATTGTACTGCGACTCGGGTC...............................................................2011.001000001
...............................................................................................................TATTGTACTGCGACTCGGGCGA..............................................................2211.001100000
................................................................................................................ATTGTACTGCGACTCGGGTCT..............................................................2111.001000001
................................................................................................................ATTGTACTGCGACTCGGGTCC..............................................................2111.001000001
...................................................................................................................GTACTGCGACTCGGGTCA..............................................................1811.001000001
..............................................................................................................ATATTGTACTGCGACTCGGGTCA..............................................................2311.001010000
...............................................................................................................TATTGTACTGCGACTCGGGTCCG.............................................................2311.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTCTTT............................................................2411.001000001
.................................................................................................................TTGTACTGCGACTCGGGTCA..............................................................2011.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTA...............................................................2111.001000001
...............................................................................................................TATTGTACTGCGACTCGTTA................................................................2011.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTCG..............................................................2211.001000001
droVir3
GCACCA-ATATGTGTGAGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
No Reads
droMoj3
ATG---------------------------------------------------------------------------------------TGTGTGTGAAATTAAATATTAG00202010
...............................................................................................................TATTGTACTGCGACTCGGGTC...............................................................21449.5019814201014701330
...............................................................................................................TATTGTACTGCGACTCGGT.................................................................19443.00172130001901580
................................................................................................................ATTGTACTGCGACTCGGGC................................................................19437.501506210000501180
...............................................................................................................TATTGTACTGCGACTCGTTT................................................................20436.751472500013501040
................................................................................................................ATTGTACTGCGACTCGGGCCA..............................................................21335.67107022000010840
...............................................................................................................TATTGTACTGCGACTCGGGTCC..............................................................22435.251412600002001130
...............................................................................................................TATTGTACTGCGACTCGGGA................................................................20432.00128431001290900
...............................................................................................................TATTGTACTGCGACTCGGGCCCT.............................................................23331.339431010040850
...............................................................................................................TATTGTACTGCGACTCGGTT................................................................20428.75115120000171940
...............................................................................................................TATTGTACTGCGACTCGTT.................................................................19427.7511146000160931
...............................................................................................................TATTGTACTGCGACTCGGGCCCCT............................................................24325.337600000050710
...............................................................................................................TATTGTACTGCGACTCGGGCTC..............................................................22424.009641000190810
...............................................................................................................TATTGTACTGCGACTCGGGTTT..............................................................22420.0080240001210520
...............................................................................................................TATTGTACTGCGACTCGGGTTC..............................................................22419.257721020170622
...............................................................................................................TATTGTACTGCGACTCGGGCCTCC............................................................24315.334611000000440
...............................................................................................................TATTGTACTGCGACTCGGTTT...............................................................21414.2557000000110460
...............................................................................................................TATTGTACTGCGACTCGGGCTCC.............................................................23413.505430000040452
...............................................................................................................TATTGTACTGCGACTCGGA.................................................................19413.505410000160460
...............................................................................................................TATTGTACTGCGACTCGGGCTT..............................................................22413.00ATTGAACTGAGAAGCAGTCC---------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droBip1
TTACCCATAATAAAATATGCTAAATACAACTCAGACAGGAATGTAATAAAAAATATTATATAGCCTG--------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TT------------------------------------------------------------------------------------------------GAATTATATATTGCACCGTACTGGGGCTTAAGCAAACCATT--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3 <......................................................................................TATTGTACTGCGACTCGGGCCG..............................................................
TTCTC-------------------------------------->5222010050420
...............................................................................................................TATTGTACTGCGACTCGGGCCAT.............................................................23312.673816000010300
...............................................................................................................TATTGTACTGCGACTCGTTC................................................................20412.0048000000120360
...............................................................................................................TATTGTACTGCGACTCGGGCCTT.............................................................23311.673520000010320
...............................................................................................................TATTGTACTGCGACTCGGGTCT..............................................................22410.0040310000120240
................................................................................................................ATTGTACTGCGACTCGGGCCC..............................................................21310.003042000010230
...............................................................................................................TATTGTACTGCGACTCTTT.................................................................1949.253700000000370
...............................................................................................................TATTGTACTGCGACTCGGGCCAA.............................................................2339.002701000110240
...............................................................................................................TATTGTACTGCGACTCGGGCCTC.............................................................2338.002420000030190
...............................................................................................................TATTGTACTGCGACTCGGTTC...............................................................2148.003200000040280
...............................................................................................................TATTGTACTGCGACTCGGGCG...............................................................2147.503000000020280
...............................................................................................................TATTGTACTGCGACTCGTC.................................................................1947.002823000010220
................................................................................................................ATTGTACTGCGACTCGGGT................................................................1946.002404000130160
...............................................................................................................TATTGTACTGCGACTCGGGTA...............................................................2145.752301000070150
...............................................................................................................TATTGTACTGCGACTCGGGG................................................................2045.502200000000220
...............................................................................................................TATTGTACTGCGACTCGGGAA...............................................................2145.252100000051150
...............................................................................................................TATTGTACTGCGACTCGGGCCCA.............................................................2334.331300000020110
...............................................................................................................TATTGTACTGCGACTCGGGCTTC.............................................................2344.251700000020150
...............................................................................................................TATTGTACTGCGACTCGGTC................................................................2044.00160100007080
...............................................................................................................TATTGTACTGCGACTCGGTA................................................................2044.001600000030130
.........................-----------------------------------------AATACATGTATATAAAATTTAATATTTTATTG-------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		2234.00121100001090
...............................................................................................................TATTGTACTGCGACTCGTTA................................................................2043.751500000020130
...............................................................................................................TATTGTACTGCGACTCGGGCCCTC............................................................2433.67110100001090
...............................................................................................................TATTGTACTGCGACTCGGGCCTTT............................................................2433.67110400000070
...............................................................................................................TATTGTACTGCGACTCGGGTTA..............................................................2243.501400000020120
...............................................................................................................TATTGTACTGCGACTCGGTCC...............................................................2143.251300000020110
...............................................................................................................TATTGTACTGCGACTCGGGCCAC.............................................................2333.0090000000090
...............................................................................................................TATTGTACTGCGACTCGGGCCCTT............................................................2433.0090000000090
................................................................................................................ATTGTACTGCGACTCGGGTT...............................................................2042.75110100001090
...............................................................................................................TATTGTACTGCGACTCGGGCCATCC...........................................................2532.6781000000070
...............................................................................................................TATTGTACTGCGACTCGGGAAA..............................................................2242.50100100002070
...............................................................................................................TATTGTACTGCGACTCGGGCCCCA............................................................2432.3370000000070
...............................................................................................................TATTGTACTGCGACTCGGGCCTTC............................................................2432.3370000000070
................................................................................................................ATTGTACTGCGACTCGGGCCT..............................................................2132.3370200000050
...............................................................................................................TATTGTACTGCGACTCGGAA................................................................2042.2590000004050
...............................................................................................................TATTGTACTGCGACTCGGGGCC..............................................................2242.2590000000090
..............................................................................................................ATATTGTACTGCGACTCGGGC................................................................2142.2590100000080
...............................................................................................................TATTGTACTGCGACTCGGGCTTT.............................................................2342.2590000000090
.................................................................................................................TTGTACTGCGACTCGGGCCA..............................................................2032.0060300000030
...............................................td>SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2
.......................................................................................ACATGTATATAAAATTTAATATTTT...................................................................................2511.001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droYak3
GAA--------------------------------------ATCGATAGAGAG--CTATATGGTATATGGTATGCC-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae
No Reads
................................................................TATTGTACTGCGACTCGGC.................................................................		1942.0081000000070
..............................................................................................................ATATTGTACTGCGACTCGGG.................................................................2042.0080000000080
...............................................................................................................TATTGTACTGCGACTCGTAA................................................................2042.0081000002050
...............................................................................................................TATTGTACTGCGACTCGT..................................................................1842.0081001000060
...............................................................................................................TATTGTACTGCGACTCGGGTCA..............................................................2242.0080100004030
.................................................................................................................TTGTACTGCGACTCGGGCC...............................................................1932.0063100001010
...............................................................................................................TATTGTACTGCGACTCGGGCCATT............................................................2432.0060100000050
...............................................................................................................TATTGTACTGCGACTCGGGGC...............................................................2141.7570000000061
..........................................................................................................TATCATATTGTACTGCGACTCGGGC................................................................2541.7570000000070
...............................................................................................................TATTGTACTGCGACTCGGGTCG..............................................................2241.7570000000070
...............................................................................................................TATTGTACTGCGACTCGTA.................................................................1941.7571000002040
...............................................................................................................TATTGTACTGCGACTCGGGAC...............................................................2141.7575000000020
...............................................................................................................TATTGTACTGCGACTCGGGCTA..............................................................2241.7570100001050
.........................................................................GCCCGGTTCCCAGCACATGTATG...................................................................................................2341.7570000000070
...............................................................................................................TATTGTACTGCGACTCGGTCT...............................................................2141.7570000001060
...............................................................................................................TATTGTACTGCGACTCGGGCCAAA............................................................2431.6750000000050
...............................................................................................................TATTGTACTGCGACTCGGGCCACC............................................................2431.6750000001040
................................................................................................................ATTGTACTGCGACTCGGGCT...............................................................2041.5060200001030
...............................................................................................................TATTGTACTGCGACTCGTCC................................................................2041.5060000004020
...............................................................................................................TATTGTACTGCGACTCGTCT................................................................2041.5060100001040
..............................................................................................................ATATTGTACTGCGACTCGGGCC...............................................................2231.3340000000040
................................................................................................................ATTGTACTGCGACTCGGGCCCC.............................................................2231.3341000000030
...............................................................................................................TATTGTACTGCGACTCGGGCCCTA............................................................2431.3340000000040
...............................................................................................................TATTGTACTGCGACTCGGTTA...............................................................2141.2550000001040
...............................................................................................................TATTGTACTGCGACTCGTCG................................................................2041.2550000002030
................................................................................................................ATTGTACTGCGACTCGGGTC...............................................................2041.2550300002000
...............................................................................................................TATTGTACTGCGACTCGGGAT...............................................................2141.2550000001040
...............................................................................................................TATTGTACTGCGACTCGGGCTCT.............................................................2341.2550000001040
................................................................................................................ATTGTACTGCGACTCGGT.................................................................1841.2550000000050
...............................................................................................................TATTGTACTGCGACTCGGGCCAAT............................................................2431.0030000001020
..............................................................................................................ATATTGTACTGCGACTCGGGCCT..............................................................2331.0030000000030
...............................................................................................................TATTGTACTGCGACTCGGGTAA..............................................................2241.0040000000040
...............................................................................................................TATTGTACTGCGACTCGTTG................................................................2041.0040100010020
...............................................................................................................TATTGTACTGCGACT.....................................................................1541.0040000000040
................................................................................................................ATTGTACTGCGACTCGGTT................................................................1941.0040100001020
...............................................................................................................TATTGTACTGCGACTCGGGCCATCA...........................................................2531.0030000000030
...............................................................................................................TATTGTACTGCGACTCAGG.................................................................1941.0040000002020
...............................................................................................................TATTGTACTGCGACTCGGGCCATAA...........................................................2531.0030000000030
...............................................................................................................TATTGTACTGCGACTCGGGAG...............................................................2141.0040000000040
..............................................................................................................ATATTGTACTGCGACTCGGGCCA..............................................................2331.0030000000030
...............................................................................................................TATTGTACTGCGACTCGGTCG...............................................................2141.0040000000040
...............................................................................................................TATTGTACTGCGACTCG...................................................................1741.0040000000040
...............................................................................................................TATTGTACTGCGACTCGGGCCATC............................................................2431.0032100000000
...............................................................................................................TATTGTACTGCGACTCGGGGT...............................................................2140.7531000000020
..............................................................................................................ATATTGTACTGCGACTCGG..................................................................1940.7530000000030
......................................................................................................TAAATATCATATTGTACTGCGACTCGG..................................................................2740.7530000000030
............................................................................................................TCATATTGTACTGCGACTCGGG.................................................................2240.7530000000030
...............................................................................................................TATTGTACTGCGACTCTG..................................................................1840.7530000000030
...............................................................................................................TATTGTACTGCGACTCGGCTT...............................................................2140.7530000001020
.................................................................................................................TTGTACTGCGACTCGGG.................................................................1740.7530000000030
...............................................................................................................TATTGTACTGCGACTCGCG.................................................................1940.7530000000030
...............................................................................................................TATTGTACTGCGACTCGTCA................................................................2040.7530000000030
..........................................................................................................TATCATATTGTACTGCGACTCGGG.................................................................2440.7530000000030
...............................................................................................................TATTGTACTGCGACTCGGTCA...............................................................2140.7530000001020
...............................................................................................................TATTGTACTGCGACTCGGAAA...............................................................2140.7530000002010
...............................................................................................................TATTGTACTGCGACTCGGTAA...............................................................2140.7530000000030
...............................................................................................................TATTGTACTGCGACTCGGGTG...............................................................2140.7530100000020
...............................................................................................................TATTGTACTGCGACTCGGGACC..............................................................2240.7531000000020
...............................................................................................................TATTGTACTGCGACTCGGAC................................................................2040.7532000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATTA...........................................................2530.6720000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCAATC...........................................................2530.6720000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCAGT............................................................2430.6720000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCTCA............................................................2430.6720000000020
.................................................................................................................TTGTACTGCGACTCGGGCCC..............................................................2030.6720000000020
..........................................................................................................TATCATATTGTACTGCGACTCGGGCC...............................................................2630.6720000000020
................................................................................................................ATTGTACTGCGACTCGGGCCTT.............................................................2230.6720100000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAATT...........................................................2530.6720000000020
..................................................................................................................TGTACTGCGACTCGGGCC...............................................................1830.6721000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATTC...........................................................2530.6720000000020
............................................................................................................TCATATTGTACTGCGACTCG...................................................................2040.5020000000020
................................................................................................................ATTGTACTGCGACTCGTTT................................................................1940.5020000010010
...............................................................................................................TATTGTACTGCGACTCGGCG................................................................2040.5020000000020
......................................................................................................TAAATATCATATTGTACTGCGACTC....................................................................2540.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGCT................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGAT................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGCCA...............................................................2140.5020000002000
...............................................................................................................TATTGTACTGCGACTCGGACC...............................................................2140.5020000000020
...............................................................................................................TATTGTACTGCGACTCTTG.................................................................1940.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGGCTTA.............................................................2340.5020000001010
......................................................................................................TAAATATCATATTGTACTGCGACTCG...................................................................2640.5020000000020
...............................................................................................................TATTGTACTGCGACTCGAGC................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGGGAA..............................................................2240.5020000000020
.............................................................................................................CATATTGTACTGCGACTCGGGC................................................................2240.5020000000020
...............................................................................................................TATTGTACTGCGACTCCCC.................................................................1940.5020000010010
...............................................................................................................TATTGTACTGCGACTCGGGCTGT.............................................................2340.5020000000020
...............................................................................................................TATTGTACTGCGACTCGCGC................................................................2040.5020000001010
...............................................................................................................TATTGTACTGCGACTCGGGATT..............................................................2240.5020000001010
...............................................................................................................TATTGTACTGCGACTCGGGCTCG.............................................................2340.5020000000020
...............................................................................................................TATTGTACTGCGACTCTCT.................................................................1940.5021000000010
...............................................................................................................TATTGTACTGCGACTCGGCCC...............................................................2140.5020000001010
............................................................................................................TCATATTGTACTGCGACTCGGGC................................................................2340.5020000000020
................................................................................................................ATTGTACTGCGACTCGGGTCC..............................................................2140.5020100000010
.......................................................TTATATAGTTTGTAGTTG..........................................................................................................................1820.5010000000010
...............................................................................................................TATTGTACTGCGACTCGGGGA...............................................................2140.5020000000020
...............................................................................................................TATTGTACTGCGACTCGAAA................................................................2040.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGAAG...............................................................2140.5020000000020
...............................................................................................................TATTGTACTGCGACTCGGGCCAG.............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATTG...........................................................2530.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCGT.............................................................2330.3310000000010
.................................................................................................................TTGTACTGCGACTCGGGCCAT.............................................................2130.3310100000000
................................................................................................................ATTGTACTGCGACTCGGGCCG..............................................................2130.3310000000010
...................................................................................................................GTACTGCGACTCGGGCCC..............................................................1830.3310001000000
...............................................................................................................TATTGTACTGCGACTCGGGCCTCG............................................................2430.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCATA............................................................2430.3310000000010
................................................................................................................ATTGTACTGCGACTCGGGCCAA.............................................................2230.3310000000010
...................................................................................................................GTACTGCGACTCGGGCCA..............................................................1830.3310000000010
................................................................................................................ATTGTACTGCGACTCGGGCCTTT............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCCG.............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCACTG...........................................................2530.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCTCT............................................................2430.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCTA.............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCG........................................................2830.3310000000010
................................................................................................................ATTGTACTGCGACTCGGGCCCCC............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAAAA...........................................................2530.3310000000010
..............................................................................................................ATATTGTACTGCGACTCGGGCCC..............................................................2330.3310000000010
...............................................................................................................TATTGTACTGCGACTCGGGCCAATTCCC........................................................2830.3310000000010
..........................................................................................................TATCATATTGTACTGCGACTCGG..................................................................2340.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGGAC..............................................................2240.2510000000010
...............................................................................................................TATTGTACTGCGACTCTT..................................................................1840.2510000000010
................................................................................................................ATTGTACTGCGACTCGGGA................................................................1940.2510000001000
...............................................................................................................TATTGTACTGCGACTCGGGACA..............................................................2240.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGCC................................................................2040.2510000000010
................................................................................................................ATTGTACTGCGACTCGGGCTT..............................................................2140.2510000000010
............................................................................................................TCATATTGTACTGCGACTCCC..................................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGTAT..............................................................2240.2510000010000
...................................................................................................................GTACTGCGACTCGGGC................................................................1640.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGATA...............................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGTTG..............................................................2240.2510100000000
...............................................................................................................TATTGTACTGCGACTCGGGATC..............................................................2240.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGACA...............................................................2140.2510000000010
.....................................................................................................TTAAATATCATATTGTACTGCGAC......................................................................2440.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGATG...............................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGTTG...............................................................2140.2510000000010
..............................................................................................................ATATTGTACTGCGACTCGGGT................................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCTTC.................................................................1940.2510000010000
..............................................................................................................ATATTGTACTGCGACTCGGA.................................................................2040.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGCGT..............................................................2240.2510000001000
................................................................................................................ATTGTACTGCGACTCGGGGA...............................................................2040.2511000000000
...............................................................................................................TATTGTACTGCGACTCT...................................................................1740.2510000000010
......................................................................................................TAAATATCATATTGTACTGCGACT.....................................................................2440.2510000000010
...............................................................................................................TATTGTACTGCGACTCGAGT................................................................2040.2510000000010
......................................................................................................TAAATATCATATTGTACTGCGACTCGGGC................................................................2940.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGCTAT.............................................................2340.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGGAAT..............................................................2240.2510000001000
...............................................................................................................TATTGTACTGCGACTCTGG.................................................................1940.2510000000010
...............................................................................................................TATTGTACTGCGACTCTCC.................................................................1940.2511000000000
................................................................................................................ATTGTACTGCGACTCGGAAA...............................................................2040.2510000001000
................................................................................................................ATTGTACTGCGACTCGGTTC...............................................................2040.2511000000000
...............................................................................................................TATTGTACTGCGACTC....................................................................1640.2510000000010
................................................................................................................ATTGTACTGCGACTCGGGCTC..............................................................2140.2510000000010
...............................................................................................................TATTGTACTGCGACTCTCG.................................................................1940.2510000000010
...............................................................................................................TATTGTACTGCGACTCGGTAT...............................................................2140.2510000000010
............................................................................................................TCATATTGTACTGCGACT.....................................................................1840.2511000000000
...............................................................................................................TATTGTACTGCGACTCCTT.................................................................1940.2511000000000
.........................................................................GCCCGGTTCCCAGCACATGTATGAT.................................................................................................2540.2510000000010
...............................................................................................................TATTGTACTGCGACTCCGG.................................................................1940.2510000001000
.................................................................................................................TTGTACTGCGACTCGGGC................................................................1840.2510100000000
...............................................................................................................TATTGTACTGCGACTCGA..................................................................1840.2511000000000
...............................................................................................................TATTGTACTGCGACTCGTAT................................................................2040.2510000001000
...............................................................................................................TATTGTACTGCGACTCGTG.................................................................1940.2510000000010
.....................................................................................................................................ATTATTAGCTCAAGACCAGCCGTGTCCC..................................2840.2510000001000
droPer2
GTCTCC-TCATACGTGACATTAAGTCCAATCCGAACAGGGAATCAATCGAGAG--TTATATAGTTTATAGTTGGCCCGGTTCCCAGCACCTGTATGTTGAATTAAATATCATATTGTACTGCGACTCGGGTCAATTATTAGCTCAAGACCAGCCGTGGGCGAAAAGACCCCGGAGGACAATCATTGGAAGTCCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................TATTGTACTGCGACTCGGGTCA..............................................................221886.00886440121223795
...............................................................................................................TATTGTACTGCGACTCGGGTCT..............................................................221106.0010601110103
...............................................................................................................TATTGTACTGCGACTCGGGTC...............................................................21191.009111323765
...............................................................................................................TATTGTACTGCGACTCGGGTCC..............................................................22151.00512101047
...............................................................................................................TATTGTACTGCGACTCGGGT................................................................20132.00320200030
...............................................................................................................TATTGTACTGCGACTCGGGCCC..............................................................2219.009900000
................................................................................................................ATTGTACTGCGACTCGGGTCA..............................................................2118.008070001
...............................................................................................................TATTGTACTGCGACTCGGGTT...............................................................2116.006000006
...............................................................................................................TATTGTACTGCGACTCGGGCC...............................................................2115.005300002
...............................................................................................................TATTGTACTGCGACTCGGGTTT..............................................................2215.005000005
...............................................................................................................TATTGTACTGCGACTCGGGCCA..............................................................2214.004300001
...............................................................................................................TATTGTACTGCGACTCGGTTT...............................................................2114.004000004
...............................................................................................................TATTGTACTGCGACTCGGGTTC..............................................................2214.004000004
...............................................................................................................TATTGTACTGCGACTCGGG.................................................................1914.004100003
...............................................................................................................TATTGTACTGCGACTCGGGTCAA.............................................................2313.003010002
...............................................................................................................TATTGTACTGCGACTCGGGC................................................................2013.003300000
...............................................................................................................TATTGTACTGCGACTCGGGCAA..............................................................2213.003200001
...............................................................................................................TATTGTACTGCGACTCGTTT................................................................2013.003000003
..................................................................................................................TGTACTGCGACTCGGGTCA..............................................................1913.003000003
...............................................................................................................TATTGTACTGCGACTCGGTT................................................................2013.003000003
...............................................................................................................TATTGTACTGCGACTCGGGCA...............................................................2113.003300000
...............................................................................................................TATTGTACTGCGACTCGGGTTTT.............................................................2313.003000003
................................................................................................................ATTGTACTGCGACTCGGGCC...............................................................2012.002200000
...............................................................................................................TATTGTACTGCGACTCGTT.................................................................1912.002000002
...............................................................................................................TATTGTACTGCGACTCGGGTCTT.............................................................2312.002000002
...............................................................................................................TATTGTACTGCGACTCGGGCCT..............................................................2212.002100001
...............................................................................................................TATTGTACTGCGACTCGTTC................................................................2012.002000002
...............................................................................................................TATTGTACTGCGACTCGGGTCCC.............................................................2312.002000002
...............................................................................................................TATTGTACTGCGACTCGGGCT...............................................................2112.002200000
...............................................................................................................TATTGTACTGCGACTCGGGGCA..............................................................2211.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTTAA.............................................................2311.001010000
...............................................................................................................TATTGTACTGCGACTCTTT.................................................................1911.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTCCCT............................................................2411.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTAA..............................................................2211.001000001
................................................................................................................ATTGTACTGCGACTCGGGTC...............................................................2011.001000001
...............................................................................................................TATTGTACTGCGACTCGGGCGA..............................................................2211.001100000
................................................................................................................ATTGTACTGCGACTCGGGTCT..............................................................2111.001000001
................................................................................................................ATTGTACTGCGACTCGGGTCC..............................................................2111.001000001
...................................................................................................................GTACTGCGACTCGGGTCA..............................................................1811.001000001
..............................................................................................................ATATTGTACTGCGACTCGGGTCA..............................................................2311.001010000
...............................................................................................................TATTGTACTGCGACTCGGGTCCG.............................................................2311.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTCTTT............................................................2411.001000001
.................................................................................................................TTGTACTGCGACTCGGGTCA..............................................................2011.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTA...............................................................2111.001000001
...............................................................................................................TATTGTACTGCGACTCGTTA................................................................2011.001000001
...............................................................................................................TATTGTACTGCGACTCGGGTCG..............................................................2211.001000001
droVir3
GCACCA-ATATGTGTGAGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
No Reads
droMoj3
ATG---------------------------------------------------------------------------------------TGTGTGTGAAATTAAATATTAGATTGAACTGAGAAGCAGTCC---------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droBip1
TTACCCATAATAAAATATGCTAAATACAACTCAGACAGGAATGTAATAAAAAATATTATATAGCCTG--------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TT------------------------------------------------------------------------------------------------GAATTATATATTGCACCGTACTGGGGCTTAAGCAAACCATT--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTCTC-------------------------------------------------------------------------------AATACATGTATATAAAATTTAATATTTTATTG-------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2
.......................................................................................ACATGTATATAAAATTTAATATTTT...................................................................................2511.001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droYak3
GAA--------------------------------------ATCGATAGAGAG--CTATATGGTATATGGTATGCC-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae
No Reads

Generated: 11/04/2014 at 10:17 PM

Generated: 11/04/2014 at 10:17 PM