ID:

dps-mir-2518-4

 Coordinate:

Unknown_group_95:5483-5587 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

CDS

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.3 -38.3 -38.0

Flybase annnotation

CDS [Dpse\GA25502-cds]

No Repeatable elements found

mature

  1. dps-mir-2518-4  Unknown_group_95:5553-5575 +
  2. Unknown_group_95:14830-14852 +
  3. dps-mir-2518-2  Unknown_group_82:14101-14123 +
  4. dps-mir-2518-3  Unknown_group_82:18193-18215 +
  5. Unknown_singleton_2064:2998-3020 +
  6. Unknown_singleton_2064:13134-13156 +
  7. Unknown_singleton_2064:18208-18230 +
  8. dps-mir-2518-1  Unknown_singleton_1205:598-620 +
  9. Unknown_singleton_3319:156-178 +
  10. Unknown_singleton_2249:2085-2107 -
star

  1. dps-mir-2518-4  Unknown_group_95:5520-5544 +
  2. dps-mir-2518-3  Unknown_group_82:18160-18184 +
  3. Unknown_group_319:11761-11785 +
  4. Unknown_singleton_2064:8016-8040 +
  5. Unknown_singleton_2249:2116-2140 -

Sense Strand Reads

GAAGACGGAGGAGAGCTGGCAAGCCGACGCGCGGGAGCAGAGCGCAAAAACGGCCAACGGGCAGCCACACACACACACACGACCGGATCGAACCCGTTGCGAATCGAACTTGGTTTGAGTTCGAGCAGCGGGTCGATCCGAGCCATAGCCCAGCCTGACCCATCACAACCACAATCACAGCCAATCCCACCAACACCAAAACGAC

************************************************************************...........(((((((.(((((((((...((((((((.....))))))))))))))))))))))))..................*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 M059

embryo

 V112

male body		 GSM343916

embryo

 SRR902010

ovaries

 M062

head

 SRR902011

testis

 M022

male body
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGC.............................................................. 23 0 10 156.20 1562 1508 31 15 8 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCC............................................................. 24 0 10 52.90 529 526 1 1 1 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAG............................................................... 22 0 10 52.40 524 496 6 8 14 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCA............................................................ 25 0 10 19.10 191 185 0 6 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGA................................................................ 21 0 10 14.60 146 130 1 3 11 0 0 0 1
.......................................................................................................................TTCGAGCAACGGGTCGATCCGAGC.............................................................. 24 1 9 11.78 106 103 2 0 1 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGC.............................................................. 22 0 10 10.70 107 107 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAGC.............................................................. 23 1 10 6.20 62 62 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGT.............................................................. 23 1 10 5.80 58 55 2 0 1 0 0 0 0
....................................................................................................................................................................................CCAATCCCACCAACACCAAAACGAC 25 0 13 4.23 55 37 13 0 2 1 0 2 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGA.............................................................. 23 1 10 4.10 41 41 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATCCGAGCC............................................................. 25 1 9 3.78 34 31 0 2 1 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGCC............................................................. 23 0 10 3.50 35 35 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAG............................................................... 22 1 10 3.40 34 33 0 0 1 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATCCGAG............................................................... 23 1 9 3.11 28 26 1 1 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCG................................................................. 20 0 12 3.00 36 36 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAG............................................................... 21 0 10 2.80 28 28 0 0 0 0 0 0 0
....................................................................................................................................................................................CCAATCCCACCAACACCAAAACGA. 24 0 13 2.38 31 19 0 0 0 12 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCAT........................................................... 26 0 10 1.80 18 18 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAGCC............................................................. 24 1 10 1.50 15 15 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGCCA............................................................ 24 0 10 1.50 15 15 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGC.............................................................. 21 0 10 1.40 14 13 1 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGA................................................................ 21 1 10 1.20 12 12 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCT............................................................ 25 1 10 1.20 12 12 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCC.................................................................. 19 0 16 1.19 19 18 0 0 1 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGCCATAGC........................................................ 27 0 9 1.00 9 9 0 0 0 0 0 0 0
....................................................................................................................................................................................CCAATCCCACCAACACCGAAACGAC 25 1 17 0.82 14 11 3 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCA............................................................. 24 1 10 0.80 8 8 0 0 0 0 0 0 0
.......................................................................................TCGAACCCGTTGCGAATCGAACTTG............................................................................................. 25 0 5 0.80 4 4 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCT............................................................. 24 1 10 0.80 8 6 0 2 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGCCATAG......................................................... 26 0 9 0.78 7 7 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGGTCCGAGC.............................................................. 22 1 10 0.70 7 7 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGA................................................................ 20 0 10 0.70 7 6 0 1 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAG............................................................... 20 0 10 0.70 7 6 0 0 1 0 0 0 0
.......................................................................................................................TTCGAGCAGCGGGTCGATCCGAGC.............................................................. 24 0 6 0.67 4 4 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATCCGA................................................................ 22 1 9 0.67 6 5 1 0 0 0 0 0 0
........................................................................................CGAACCCGTTGCGAATCGAACTTGG............................................................................................ 25 0 5 0.60 3 3 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAGCCA............................................................ 25 1 10 0.60 6 6 0 0 0 0 0 0 0
.......................................................................................TCGAACCCGTTGCGAATCGAACTTGG............................................................................................ 26 0 5 0.60 3 3 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGAA............................................................. 24 2 10 0.60 6 5 1 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAAA.............................................................. 23 2 10 0.60 6 5 1 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAGT.............................................................. 23 2 10 0.60 6 6 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCG................................................................. 20 1 12 0.58 7 7 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGATCCGAGCCATAGC........................................................ 24 0 9 0.56 5 4 1 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATCCGAGCCA............................................................ 26 1 9 0.56 5 5 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGTT............................................................. 24 2 10 0.50 5 5 0 0 0 0 0 0 0
........................................................................................................................TCGAGCGGCGGGTCGATCCGAG............................................................... 22 1 12 0.50 6 6 0 0 0 0 0 0 0
.....................................................................................................................................................................CAACCACAATCACAGCCAATCCCA................ 24 0 4 0.50 2 2 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGCCA............................................................ 23 0 10 0.50 5 5 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAGCGGGTCGATCCGAG............................................................... 23 0 6 0.50 3 3 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGATCCGAGCCATAGCCC...................................................... 26 0 9 0.44 4 3 1 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCG................................................................. 19 0 12 0.42 5 5 0 0 0 0 0 0 0
........................................................................................................................TCGAGCGGCGGGTCGATCCGAGC.............................................................. 23 1 12 0.42 5 5 0 0 0 0 0 0 0
.......................................................................................................................GTCGAGCAGCGGGTCGATCCGAGC.............................................................. 24 1 10 0.40 4 4 0 0 0 0 0 0 0
........................................................................................................................TCGTGCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.40 4 1 3 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAA............................................................... 22 1 10 0.40 4 4 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGCC............................................................. 22 0 10 0.40 4 4 0 0 0 0 0 0 0
....................................................................................................................................................................................CCAATCCCACCAACACCAAAACG.. 23 0 13 0.38 5 5 0 0 0 0 0 0 0
................................................................................................................................CGGGTCGATCCGAGCCATAGCCCAGC................................................... 26 0 8 0.38 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................CCAATCCCACCAACACCGAAACGA. 24 1 17 0.35 6 6 0 0 0 0 0 0 0
...................................................................................................................................GTCGATCCGAGCCATAGCCCAGC................................................... 23 0 9 0.33 3 1 0 1 0 1 0 0 0
...............................................AAACGGCCAACGGGCAGCC........................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATCCGAGA.............................................................. 24 2 9 0.33 3 3 0 0 0 0 0 0 0
................................................AACGGCCAACGGGCAGCCAC......................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................AGCAGCGGGTCGATCCGAGCCATAGC........................................................ 26 0 9 0.33 3 3 0 0 0 0 0 0 0
..............................................................................................................................AGCGGGTCGATCCGAGCCATAGC........................................................ 23 0 9 0.33 3 3 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATCCG................................................................. 21 1 9 0.33 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACCGA...... 25 1 15 0.33 5 5 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAGCGGGTCGATCCGAGCC............................................................. 25 0 6 0.33 2 2 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCGGCGGGTCGATCCGAGC.............................................................. 24 1 6 0.33 2 2 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCGGCGGGTCGATCCGAG............................................................... 23 1 6 0.33 2 2 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGATCCGAGCCATAG......................................................... 23 0 9 0.33 3 3 0 0 0 0 0 0 0
.....................................................................................................................................CGGTCCGAGCCATAGCCCAGCCTGA............................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGTTCGAGCAACGGGTCGATCCGAGC.............................................................. 26 1 9 0.33 3 3 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATC................................................................... 18 0 16 0.31 5 5 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGT.............................................................. 22 1 10 0.30 3 3 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGAAA............................................................ 25 2 10 0.30 3 3 0 0 0 0 0 0 0
...........................................................................................................................AGCAGCGGGTCGATCCGAGC.............................................................. 20 0 10 0.30 3 3 0 0 0 0 0 0 0
.......................................................................................................................ATCGAGCAGCGGGTCGATCCGAGC.............................................................. 24 1 10 0.30 3 3 0 0 0 0 0 0 0
................................................................................................................................CGGGTCGATCCGAGCCATAGCCC...................................................... 23 0 10 0.30 3 2 1 0 0 0 0 0 0
....................................................................................................................................................................ACAGCCACAATCACAGCCAATCCCAC............... 26 1 7 0.29 2 2 0 0 0 0 0 0 0
....................................................................................................................................TCGATCCGAGCCATAGCCCAG.................................................... 21 0 11 0.27 3 3 0 0 0 0 0 0 0
.....................................................................................................................................CGATCCGAGCCATAGCCCAGCC.................................................. 22 0 8 0.25 2 2 0 0 0 0 0 0 0
.............................................................CAGCCACACACACACACACGAACGGA...................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................CAACCACAATCACAGCCAATCCCACCAA............ 28 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CAATCCCACCAACACCAAAACGAC 24 0 13 0.23 3 3 0 0 0 0 0 0 0
..............................................................................................................................AGCGGGTCGATCCGAGCCATAGCC....................................................... 24 0 9 0.22 2 2 0 0 0 0 0 0 0
............................................................................................CCCGTTGCGAATCGAACTTGGTT.......................................................................................... 23 0 9 0.22 2 2 0 0 0 0 0 0 0
....................................................................................................................................TCGATCCGAGCCATAGCCCAGC................................................... 22 0 9 0.22 2 2 0 0 0 0 0 0 0
...............................................................................................................................GCGGGTCGATCCGAGCCATAGC........................................................ 22 0 9 0.22 2 2 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCATAG......................................................... 28 0 9 0.22 2 2 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGATCCGAGCCATAGCC....................................................... 25 0 9 0.22 2 2 0 0 0 0 0 0 0
.....................................................................................GATCGAACCCGTTGCGAATCGAACTTG............................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGACA............................................................ 25 1 10 0.20 2 2 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGATCCGAGC.............................................................. 18 0 10 0.20 2 2 0 0 0 0 0 0 0
........................................................................................................................TCGAGCGGCGGGTCGATCCGAGCCA............................................................ 25 1 10 0.20 2 2 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGA.............................................................. 22 1 10 0.20 2 2 0 0 0 0 0 0 0
........................................................................................................................TCGATCAGCGGGTCGATCCGAGCCA............................................................ 25 1 10 0.20 2 2 0 0 0 0 0 0 0
...........................................................................................................................AGCAGCGGGTCGATCCGAGCC............................................................. 21 0 10 0.20 2 2 0 0 0 0 0 0 0
................................................................................................................................CGGGTCGATCCGAGCCATAGCCCAG.................................................... 25 0 10 0.20 2 2 0 0 0 0 0 0 0
........................................................................................................................CCGAGCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.20 2 2 0 0 0 0 0 0 0
....................................................................................GGATCGAACCCGTTGCGAATCGAACT............................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGGGCAGCGGGTCGATCCGAG............................................................... 22 1 10 0.20 2 1 1 0 0 0 0 0 0
................................................................................................................................CGGGTCGATCCGAGCCATAGCC....................................................... 22 0 10 0.20 2 2 0 0 0 0 0 0 0
........................................................................................CGAACCCGTTGCGAATCGAACTTG............................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................................................................................GATCGAACCCGTTGCGAATCG................................................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................CGAACCCGTTGCGAATCGAACTTGGTT.......................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAGCCAT........................................................... 26 1 10 0.20 2 2 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGCCGATCCGAGC.............................................................. 23 1 10 0.20 2 2 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCAA........................................................... 26 1 10 0.20 2 2 0 0 0 0 0 0 0
.......................................................................................TCGAACCCGTTGCGAATCGAACTTGGTT.......................................................................................... 28 0 5 0.20 1 1 0 0 0 0 0 0 0
..............................................................................ACGACCGGATCGAACCCGTTGCG........................................................................................................ 23 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAGA.............................................................. 23 2 10 0.20 2 2 0 0 0 0 0 0 0
.........................................................................................GAACCCGTTGCGAATCGAACTTGGT........................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................................................................................CTAGCAGCGGGTCGATCCGAGCC............................................................. 23 1 10 0.20 2 1 1 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGGTCCGAG............................................................... 21 1 10 0.20 2 2 0 0 0 0 0 0 0
......................................................................................ATCGAACCCGTTGCGAATCGAACT............................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCAATCCGAGC.............................................................. 23 1 10 0.20 2 1 1 0 0 0 0 0 0
.......................................................................................TCGAACCCGTTGCGAATCGAA................................................................................................. 21 0 5 0.20 1 1 0 0 0 0 0 0 0
.......................................................................................................................ATCGAGCAGCGGGTCGATCCGAGCC............................................................. 25 1 10 0.20 2 2 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGCCATA.......................................................... 26 0 10 0.20 2 2 0 0 0 0 0 0 0
.........................................................................................GAACCCGTTGCGAATCGAAC................................................................................................ 20 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGCCAT........................................................... 25 0 10 0.20 2 2 0 0 0 0 0 0 0
.......................................................................................................................ATCGAGCAGCGGGTCGATCCGAG............................................................... 23 1 10 0.20 2 2 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATA................................................................... 18 1 16 0.19 3 2 0 0 1 0 0 0 0
.........................................................................................................................................................................CACAATCACAGCCAATCCCACCAACACC........ 28 0 12 0.17 2 2 0 0 0 0 0 0 0
...............................................................GCCACATACACACACACGAACGGA...................................................................................................................... 24 2 6 0.17 1 1 0 0 0 0 0 0 0
...........................................................................CACACGAACGGATCGAACCCGTTG.......................................................................................................... 24 1 12 0.17 2 2 0 0 0 0 0 0 0
.......................................................................CACACACACGACCGGATCGAACCCGT............................................................................................................ 26 0 6 0.17 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACCAA...... 25 0 12 0.17 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................ACAATCACAGCCAATCCCACCAAC........... 24 0 12 0.17 2 2 0 0 0 0 0 0 0
...................................................................CACACACACACACGACCGGAT..................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0
......................................................................................................................CTTCGAGCAGCGGGTCGATCCGAGC.............................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................CACACACGACCGAATCGAACCCGTTG.......................................................................................................... 26 1 6 0.17 1 1 0 0 0 0 0 0 0
.................................................................CACACACACACACACGACCGG....................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCATT.......................................................... 27 1 12 0.17 2 2 0 0 0 0 0 0 0
....................................................................................................................TTGTTCGAGCAGCGGGTCGATCCGAGCC............................................................. 28 2 6 0.17 1 1 0 0 0 0 0 0 0
.......................................................................CACACACACGACCGGATCGAAC................................................................................................................ 22 0 6 0.17 1 1 0 0 0 0 0 0 0
...................................................................................CGGATCGAACCCGTTGCGAAT..................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................ACAATCACAGCCAATCCCACCAACACC........ 27 0 12 0.17 2 1 1 0 0 0 0 0 0
....................................................................ACACACACACACGACCGGATC.................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0
.................................................................CACACACACACACACGACCGGATCG................................................................................................................... 25 0 6 0.17 1 0 0 1 0 0 0 0 0
.........................................................................CACACACGACCGGATCGAACCCGT............................................................................................................ 24 0 6 0.17 1 0 0 1 0 0 0 0 0
....................................................................ACACACACACACGACCGGATCGA.................................................................................................................. 23 0 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................TCCCACCAACACCAAAACGA. 20 0 13 0.15 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................GCCAATCCCACCAACACCAAAACGA. 25 0 13 0.15 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................CAATCCCACCAACACCAAAACGA. 23 0 13 0.15 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................CAGCCACAATCACAGCCAATCCCAC............... 25 1 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................ACACACACGACCGGATCGA.................................................................................................................. 19 0 7 0.14 1 1 0 0 0 0 0 0 0
...............................................................................................................................GCGGGTCGATCCGAGCCATAGCCCAGC................................................... 27 0 7 0.14 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACCGAAA.... 27 1 15 0.13 2 1 1 0 0 0 0 0 0
............................................CCAAAACGGCCAACGGGCAGCCAC......................................................................................................................................... 24 1 8 0.13 1 1 0 0 0 0 0 0 0
...................................................................................................................................GTCGGTCCGAGCCATAGCCCAGCC.................................................. 24 1 8 0.13 1 1 0 0 0 0 0 0 0
.................................................................................................................................GGGTCGATCCGAGCCATAGCCCAGCC.................................................. 26 0 8 0.13 1 1 0 0 0 0 0 0 0
.......................................................................CACACACACGAACGGATCGAACCCG............................................................................................................. 25 1 8 0.13 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCA.................................................................. 19 1 16 0.13 2 2 0 0 0 0 0 0 0
...................................................................................................................................GTCGATCCGAGCCATAGCCCAGCC.................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCC.................................................................. 19 1 16 0.13 2 2 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATT................................................................... 18 1 16 0.13 2 2 0 0 0 0 0 0 0
................................................................................................................................CGCGTCGATCCGAGCCATAGCCCAGC................................................... 26 1 8 0.13 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................................GCCAATCCCACCAACACCGAAACGA. 25 1 17 0.12 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................AGCCAATCCCACCAACACCGAAACGA. 26 1 17 0.12 2 2 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATCCGAGT.............................................................. 24 2 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCAATCCG................................................................. 21 2 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGGTCCGAGCCATAG......................................................... 23 1 9 0.11 1 1 0 0 0 0 0 0 0
....................................ACAGAGCGCCAAAACGGCCAACGGG................................................................................................................................................ 25 2 9 0.11 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGTTCGAGCAACGGGTCGATCCGAG............................................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0
....................................................................................................................GAGTTCGAGCAACGGGTCGATCCGAG............................................................... 26 1 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................TTTCGAGCAACGGGTCGATCCGAGCC............................................................. 26 2 9 0.11 1 1 0 0 0 0 0 0 0
.................................GGAGCAGAGCGCCAAAACGGCCAAC................................................................................................................................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGGTCCGAGCCATAG......................................................... 26 1 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGGTCCGAGCCATAGC........................................................ 24 1 9 0.11 1 1 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGCCATAGA........................................................ 27 1 9 0.11 1 1 0 0 0 0 0 0 0
..................................................................................................................................GGTCGATCCGAGCCATAGCCCAGC................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0
..............................................................................................................................AGCGGGTCGATCCGAGCCATAGCCC...................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0
...............................................................................................................................GCGGGTCGATCCGAGCCATAGCCCAG.................................................... 26 0 9 0.11 1 1 0 0 0 0 0 0 0
.....................................................................................................................................CGATCCGAGCCATAGCCCAGC................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0 0
.................................................................................................TGCGAATCGAACTTGGTA.......................................................................................... 18 1 9 0.11 1 1 0 0 0 0 0 0 0
............................................................................................................................GCAGCGGGTCGATCCGAGCCATAGCCC...................................................... 27 0 9 0.11 1 1 0 0 0 0 0 0 0
...............................................................................................................................GCGGGTCGATCCGAGCCATAGCCC...................................................... 24 0 9 0.11 1 0 0 0 0 0 1 0 0
...........................................................................................ACCCGTTGCGAGTCGAACTTGGTT.......................................................................................... 24 1 9 0.11 1 1 0 0 0 0 0 0 0
............................................................................................................................GCAGCGGGTCGATCCGAGCCATAGC........................................................ 25 0 9 0.11 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................CACAACTACAAACACAGCCAA..................... 21 2 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCAACGGGTCGATGCGAGCCA............................................................ 26 2 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................TGCGAGCAACGGGTCGATCCGAGCC............................................................. 25 2 9 0.11 1 0 1 0 0 0 0 0 0
..................................GAACAGAGCGCCAAAACGGCCAACGG................................................................................................................................................. 26 2 9 0.11 1 1 0 0 0 0 0 0 0
................................................................................................TTGCGAATCGAACTTGGTT.......................................................................................... 19 0 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................TGCGAGCAACGGGTCGATCCGAGC.............................................................. 24 2 9 0.11 1 0 1 0 0 0 0 0 0
.....................................................................................................................................CGATCCGAGCAATAGCCCAGC................................................... 21 1 9 0.11 1 0 0 0 1 0 0 0 0
..........................................................................................................................ATGCAGCGGGTCGATCCGAGCCATAGCC....................................................... 28 2 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGATCCGAGCCATAGCCCT..................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................TTCGAGCCACGGGTCGATCCGAGCC............................................................. 25 2 9 0.11 1 0 1 0 0 0 0 0 0
.................................GGAGCAGAGCGCCAAAACGGCCAACG.................................................................................................................................................. 26 1 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................TGCGATCAACGGGTCGATCCGAGC.............................................................. 24 3 9 0.11 1 0 1 0 0 0 0 0 0
.....................................CAGAGCGCCAAAACGGCCAACGGGC............................................................................................................................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0
.....................................................................................................................AGTTCGAGCAACGGGTCGATCCGA................................................................ 24 1 9 0.11 1 1 0 0 0 0 0 0 0
..........................................................................................................................GAGCGGCGGGTCGATCCGAGCCATAGC........................................................ 27 1 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................CAGCGGGTCGATCCGAGCCATAGCCCA..................................................... 27 0 9 0.11 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATAA.................................................................. 19 2 19 0.11 2 0 0 0 0 2 0 0 0
..........................................................................................................................GAGCAGCGGGTCGGTCCGAG............................................................... 20 1 10 0.10 1 1 0 0 0 0 0 0 0
...................................................................CACACACACACACGAACGGATCGAACC............................................................................................................... 27 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGTGCAGCGGGTCGATCCGAGCC............................................................. 24 1 10 0.10 1 0 1 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCAA............................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0
............................................................................................................................GCAGCGGGTCGATCCGAGC.............................................................. 19 0 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGAAC............................................................ 25 3 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCCAGCAGCGGGTCGATCCGAGT.............................................................. 23 2 10 0.10 1 1 0 0 0 0 0 0 0
..........................ATGCGCGGTAGCGGAGCGC................................................................................................................................................................ 19 3 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGCCATAA......................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TGGAGCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGATT.............................................................. 23 3 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGATT.............................................................. 23 2 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGTTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGATCGATCCGAG............................................................... 22 1 10 0.10 1 0 0 0 1 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAT............................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TGGAGCAGCGGGTCGGTCCGAG............................................................... 22 2 10 0.10 1 0 1 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCTATCAGAG............................................................... 22 2 10 0.10 1 0 0 1 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTAGATCCGAGC.............................................................. 23 1 10 0.10 1 0 0 0 1 0 0 0 0
.......................................................................................................................ATCGAGCAGCGGGTCGATCCGA................................................................ 22 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................CCGAGCAGCGGGTCGATCCGAGCC............................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCAAGCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGTGT............................................................ 25 3 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGGGCAGCGGGTCGATCCGAGCCA............................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGATCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGACCCGAGCCA............................................................ 25 1 10 0.10 1 0 0 1 0 0 0 0 0
........................................................................................................................TCGAACAGCGGGTCGATCCGAGCC............................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCCAGCAGCGGGTCGATCCGAG............................................................... 22 1 10 0.10 1 0 0 1 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGATCC............................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGGTCCGAGCC............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGCCGATCCGAG............................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGCTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGACC.............................................................. 22 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGTA............................................................. 24 2 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TGGAGCAGCGGGTCGATCCGAG............................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGACCCGAGCC............................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCCGGTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGGGCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................CGGGTCGATCCGAGCCATAGC........................................................ 21 0 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGAA............................................................. 22 2 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTTGATCCGAGAAA............................................................ 25 3 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGTTTT........................................................... 26 3 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGATCAGCGGGTCGATCCGAG............................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGGGCAGCGGGTCGATCCGAC............................................................... 22 2 10 0.10 1 0 1 0 0 0 0 0 0
........................................................................................................................TTGAGCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.10 1 0 1 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGTA............................................................. 23 2 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGAT............................................................. 24 2 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGGTCCGAGC.............................................................. 21 1 10 0.10 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGGTCCGAGA.............................................................. 22 2 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGACCAGCGGGTCGATCCGAGC.............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGGTCCGAA............................................................... 22 2 10 0.10 1 1 0 0 0 0 0 0 0
............................................................................................................................GCAGCGGGTCGATCCGAGCCA............................................................ 21 0 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCATA.......................................................... 27 0 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCCC............................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCCGAGCT............................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................GCGAGCAGCGGGTCGATCCGAG............................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGGC............................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGAGCTA............................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGGGCAGCGGGTCGATCCGAGCC............................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCTGGTCGATCCGAGCC............................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................................................................GAGCAGCGGGTCGATCCGAGCCAT........................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0
.....................................................................CACACACACACGAACGGATCGAAC................................................................................................................ 24 1 11 0.09 1 1 0 0 0 0 0 0 0
...........................................................................CACACGAACGGATCGAACCCGTTGCG........................................................................................................ 26 1 11 0.09 1 0 0 0 1 0 0 0 0
........................................................................................................................TCGAGCATCGGGTCGATCCGAGC.............................................................. 23 1 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................................................................................GGGTCGATCCGAGCCATAGCCCAG.................................................... 24 0 11 0.09 1 1 0 0 0 0 0 0 0
.........................................................................CACACACGAACGGATCGAACCCGTTGC......................................................................................................... 27 1 11 0.09 1 1 0 0 0 0 0 0 0
.....................................................................CACATACACACGAACGGATCGAACC............................................................................................................... 25 2 11 0.09 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCATCGGGTCGATCCGAG............................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGCG............................................................... 22 1 12 0.08 1 0 0 0 1 0 0 0 0
........................................................................................................................TCGAGCGGCGGGTCGATCCGAGT.............................................................. 23 2 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGCGC.............................................................. 23 1 12 0.08 1 0 0 0 1 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGC................................................................ 21 1 12 0.08 1 0 1 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCGGGCC............................................................. 24 1 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAAC........... 20 0 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCGGCGGGTCGATCCGA................................................................ 21 1 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACCAAAAC... 28 0 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACC........ 23 0 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCGGCGGGTCGATCCGAG............................................................... 21 1 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACCAAAA.... 27 0 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................CACACACGAACGGATCGAACCCGTTG.......................................................................................................... 26 1 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................ACACACGAACGGATCGAACCCGTTG.......................................................................................................... 25 1 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCGGCGGGTCGATCCGAGC.............................................................. 22 1 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCGGCGGGTCGATCCGAGCC............................................................. 24 1 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................ACACACGAACGGATCGAACCCGT............................................................................................................ 23 1 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................CACAATCACAGCCAATCCCACCAACACA........ 28 1 12 0.08 1 1 0 0 0 0 0 0 0
...........................................................................CACACGAACGGATCGAACCC.............................................................................................................. 20 1 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACCAAA..... 26 0 12 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CCAATACCACCAACACCAAAACGA. 24 1 13 0.08 1 0 0 0 0 1 0 0 0
..................................................................................................................................................................................AGCCAATCCCACCAACACCAAAACGA. 26 0 13 0.08 1 1 0 0 0 0 0 0 0
.................................GGAGCAGAGCGCCAAAACGGCCA..................................................................................................................................................... 23 1 13 0.08 1 1 0 0 0 0 0 0 0
...............................CCGGAACAGAGCGCCAAAACGGCC...................................................................................................................................................... 24 3 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................CGCGGATCGAACCCGGTGCG........................................................................................................ 20 3 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................CACAGCCAATCCCACCAACACCAAAACGA. 29 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................CTGGAACAGAGCGCCAAAACGGCC...................................................................................................................................................... 24 3 13 0.08 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................CACCAACACCAAAACGAC 18 0 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGAGGGTCGATCCG................................................................. 20 1 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CGAATCCCACCAACACCAAAACGAC 25 1 13 0.08 1 0 1 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCTAGCC............................................................. 24 1 14 0.07 1 0 0 1 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCTAGC.............................................................. 23 1 14 0.07 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................AATCACAGCCAATCCCACCAACACCG....... 26 1 15 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCACAGCCAATCCCACCAACACCGAA..... 26 1 15 0.07 1 1 0 0 0 0 0 0 0
.........................................................................................................................CGAGCAGCGGGTCGATCC.................................................................. 18 0 16 0.06 1 1 0 0 0 0 0 0 0
........................................................................................................................TCGAGCAGCGGGTCGATCCAAGCC............................................................. 24 1 16 0.06 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

CTTCTGCCTCCTCTCGACCGTTCGGCTGCGCGCCCTCGTCTCGCGTTTTTGCCGGTTGCCCGTCGGTGTGTGTGTGTGTGCTGGCCTAGCTTGGGCAACGCTTAGCTTGAACCAAACTCAAGCTCGTCGCCCAGCTAGGCTCGGTATCGGGTCGGACTGGGTAGTGTTGGTGTTAGTGTCGGTTAGGGTGGTTGTGGTTTTGCTG

***********************************************...........(((((((.(((((((((...((((((((.....))))))))))))))))))))))))..................************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 V112

male body		 SRR902011

testis

 GSM343916

embryo

 SRR902010

ovaries

 M059

embryo

 GSM444067

head

 M062

head
.................................................................................................................................CCCAGCTAGGCTCGGTATCGGGT..................................................... 23 0 11 12.36 136 134 0 0 0 0 1 0 1
...............................................................................................................................CGCCCAGCTAGGCTCGGTATCGGGT..................................................... 25 0 9 12.33 111 111 0 0 0 0 0 0 0
................................................................................................................................GCCCAGCTAGGCTCGGTATCGGGT..................................................... 24 0 10 12.20 122 116 3 0 1 0 1 0 1
..................................................................................................................................CCAGCTAGGCTCGGTATCGGGT..................................................... 22 0 11 10.27 113 112 0 0 0 1 0 0 0
......................................................................TGTGTGTGTGCTGGCCTAGCT.................................................................................................................. 21 0 7 4.00 28 25 2 1 0 0 0 0 0
........................................................................................................................................................................GGTGTTAGTGTCGGTTAGGGTG............... 22 0 4 3.50 14 14 0 0 0 0 0 0 0
.......................................................................GTGTGTGTGCTGGCCTAGCT.................................................................................................................. 20 0 7 3.43 24 16 6 1 1 0 0 0 0
...................................................................................................................................CAGCTAGGCTCGGTATCGGGT..................................................... 21 0 11 2.64 29 29 0 0 0 0 0 0 0
.............................................................................................................................GTCGCCCAGCTAGGCTCGGTATCGGGT..................................................... 27 0 9 2.56 23 22 1 0 0 0 0 0 0
..............................................................................................................................TCGCCCAGCTAGGCTCGGTATCGGGT..................................................... 26 0 9 2.11 19 18 1 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTGGCCT...................................................................................................................... 19 0 6 2.00 12 12 0 0 0 0 0 0 0
........................................................................TGTGTGTGCTGGCCTAGCTTGGGC............................................................................................................. 24 0 6 2.00 12 5 2 2 0 2 1 0 0
......................................................................TGTGTGTGTGCTTGCCTAGC................................................................................................................... 20 1 13 1.85 24 24 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCTCGGTATCGGG...................................................... 22 0 11 1.82 20 20 0 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTGGCCTAGCT.................................................................................................................. 23 0 6 1.67 10 7 3 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTTGCCTAGC................................................................................................................... 22 1 11 1.64 18 18 0 0 0 0 0 0 0
.......................................................................................................................................................................TGATGTTTGTGTCGGTTAGGGTC............... 23 3 11 1.55 17 16 0 0 0 0 1 0 0
........................................................................................................................................................................GGTGTTAGTGTCGGTTAGGGT................ 21 0 9 1.44 13 13 0 0 0 0 0 0 0
........................................................................TGTGTGTGCTGGCCTAGCT.................................................................................................................. 19 0 7 1.43 10 9 0 0 0 1 0 0 0
................................................................................................................................GCCCAGCTAGGCTCGGTATCGGG...................................................... 23 0 10 1.30 13 13 0 0 0 0 0 0 0
..................................................................................................................................CCAGCTAGGCTCGGTATCGGG...................................................... 21 0 11 1.27 14 14 0 0 0 0 0 0 0
.....................................................................GTGTGTGTGTGCTTGCCTAGC................................................................................................................... 21 1 12 1.25 15 15 0 0 0 0 0 0 0
...............................................................................................................................CGCCCAGCTAGGCTCGGTATCGGG...................................................... 24 0 9 1.22 11 11 0 0 0 0 0 0 0
.......................................................................GTGTGTGTGCTGGCCTAGCTTGGGC............................................................................................................. 25 0 6 1.00 6 4 1 1 0 0 0 0 0
......................................................................TGTGTGTGTGCTGGCCTAGCTT................................................................................................................. 22 0 7 1.00 7 4 0 3 0 0 0 0 0
..........................................................................TGTGTGCTGGCCTAGCTTGGGC............................................................................................................. 22 0 6 1.00 6 3 0 2 1 0 0 0 0
.....................................................................GTGTGTGTGTGCTGGCCTAGCT.................................................................................................................. 22 0 7 1.00 7 5 2 0 0 0 0 0 0
.....................................................................GTGTGTGTGTGCTGGCCT...................................................................................................................... 18 0 7 1.00 7 7 0 0 0 0 0 0 0
.....................................................................GTGTGTGTGTGCTGGCCTAGCTT................................................................................................................. 23 0 7 0.86 6 5 1 0 0 0 0 0 0
........................................................................TGTGTGTGCTGGCCTAGCTT................................................................................................................. 20 0 7 0.86 6 5 0 0 0 0 0 1 0
...................................................................GTGTGTGTGTGTGCTGGCCT...................................................................................................................... 20 0 6 0.83 5 3 2 0 0 0 0 0 0
.......................................................................GTGTGTGTGCTTGCCTAGC................................................................................................................... 19 1 13 0.77 10 8 0 0 2 0 0 0 0
.........................................................................GTGTGTGCTGGCCTAGCTT................................................................................................................. 19 0 7 0.71 5 5 0 0 0 0 0 0 0
.......................................................................GTGTGTGTGCTGGCCTAGCTT................................................................................................................. 21 0 7 0.71 5 3 2 0 0 0 0 0 0
......................................................................TGTGTGTGTGCTGGCCTAGC................................................................................................................... 20 0 7 0.71 5 3 2 0 0 0 0 0 0
...............................................................................................................................................................................GTGTCGGTTAGGGTGGTTG........... 19 0 13 0.69 9 9 0 0 0 0 0 0 0
...................................................................GTGTGTGTGTGTGCTGGCC....................................................................................................................... 19 0 6 0.67 4 3 1 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTGGCC....................................................................................................................... 18 0 6 0.67 4 2 0 0 1 0 0 1 0
.....................................................................................................................................................................GTTGATGTTTGTGTCGGTTAGGGTC............... 25 3 8 0.63 5 5 0 0 0 0 0 0 0
..............................................................TCGGTGTATGTTTGTGTGCTTGCCT...................................................................................................................... 25 3 5 0.60 3 3 0 0 0 0 0 0 0
.......................................................................................AGCTTGGGCAACGCTTAGCTTGAAC............................................................................................. 25 0 5 0.60 3 3 0 0 0 0 0 0 0
.............................................................................GTGCTGGCCTAGCTTGGGCAACGC........................................................................................................ 24 0 5 0.60 3 2 0 0 0 0 0 1 0
.....................................................................GTGTGTGTGTGCTGGCCTAG.................................................................................................................... 20 0 7 0.57 4 4 0 0 0 0 0 0 0
.....................................................................GTGTGTGTGTGCTGGCCTAGC................................................................................................................... 21 0 7 0.57 4 3 1 0 0 0 0 0 0
.............................................................................................................................GTCGCCCAGCTAGGCTCGGTATCGGG...................................................... 26 0 9 0.56 5 5 0 0 0 0 0 0 0
.......................................................................................................................................................................CGGTGTTAGTGTCGGTTAGGGTG............... 23 1 9 0.56 5 5 0 0 0 0 0 0 0
....................................................................................................................................AGCTAGGCTCGGTATCGGGT..................................................... 20 0 11 0.45 5 5 0 0 0 0 0 0 0
..................................................................................................................................ACAGCTAGGCTCGGTATCGGGT..................................................... 22 1 11 0.45 5 5 0 0 0 0 0 0 0
.......................................................................................................................................................................TGGTGTTAGTGTCGGTTAGGGTC............... 23 1 9 0.44 4 4 0 0 0 0 0 0 0
........................................................................................................................................................................GGTGTTAGGGTCGGTTAGGGT................ 21 1 9 0.44 4 0 0 2 0 2 0 0 0
.......................................................................GTGTGTGTGCTGGCCTAGC................................................................................................................... 19 0 7 0.43 3 3 0 0 0 0 0 0 0
...........................................................................................................................................................................GTTAGTGTCGGTTAGGGTGGTTG........... 23 0 12 0.42 5 5 0 0 0 0 0 0 0
....................................................................................CCTAGCTTGGGCAACGCTTAGCT.................................................................................................. 23 0 5 0.40 2 2 0 0 0 0 0 0 0
.............................................................................................................................GTCGCCCAGCTAGGCTCGGTA........................................................... 21 0 10 0.40 4 4 0 0 0 0 0 0 0
........................................................................................GCTTGGGCAACGCTTAGCTTGAA.............................................................................................. 23 0 5 0.40 2 2 0 0 0 0 0 0 0
.............................................................................................................................GTCGCCCAGCTAGGCTCGGTAT.......................................................... 22 0 10 0.40 4 4 0 0 0 0 0 0 0
...................................................................................................................................CAGCTAGGCTCGGTATCGGG...................................................... 20 0 11 0.36 4 4 0 0 0 0 0 0 0
..........................................................................TGTGTGCTGGCCTAGCTTGGGCAAC.......................................................................................................... 25 0 6 0.33 2 0 0 2 0 0 0 0 0
...............................................................................................................................CGCCCAGCTAGGCTCGGTATCG........................................................ 22 0 9 0.33 3 3 0 0 0 0 0 0 0
.........................................................................GTGTGTGCTGGCCTAGCTTGGGC............................................................................................................. 23 0 6 0.33 2 1 1 0 0 0 0 0 0
..........................................................................TGTGTGCTGGCCTAGCTTGGG.............................................................................................................. 21 0 6 0.33 2 2 0 0 0 0 0 0 0
........................................................................TGTGTGTGCTGGCCTAGCTTG................................................................................................................ 21 0 6 0.33 2 0 0 2 0 0 0 0 0
...................................................CCGGTTGCCCGTCGGTGTGTGT.................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................GCCTAGCTTGGGCAACGCT....................................................................................................... 19 0 6 0.33 2 1 0 0 1 0 0 0 0
.........................................................................GTGTGTGCTGGCCTAGCTTGGGCAA........................................................................................................... 25 0 6 0.33 2 1 0 0 1 0 0 0 0
..................................................................TGTGTGTGTGTGTGCTGGCCT...................................................................................................................... 21 0 6 0.33 2 1 1 0 0 0 0 0 0
........................................................................................................................................................................................AGGGTGGTTGTGGTTTTG... 18 0 13 0.31 4 4 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTTAGGGTGGTTGTGGTT...... 18 0 13 0.31 4 4 0 0 0 0 0 0 0
............................................................................................................................CGTCGCCCAGCTAGGCTCGGT............................................................ 21 0 10 0.30 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................TTGATGTTTGTGTCGGTTAGGGTC............... 24 3 10 0.30 3 3 0 0 0 0 0 0 0
.....................................................................................................................................................................GTCGGTGTTAGTGTCGGTTAGGGTG............... 25 1 7 0.29 2 2 0 0 0 0 0 0 0
........................................................................TGTGTGTGCTGGCCTAGC................................................................................................................... 18 0 7 0.29 2 2 0 0 0 0 0 0 0
.........................................................................GTGTGTGCTGGCCTAGCT.................................................................................................................. 18 0 7 0.29 2 2 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCTCGGTATCGG....................................................... 21 0 11 0.27 3 3 0 0 0 0 0 0 0
.................................................................................................................................AACAGCTAGGCTCGGTATCGGGT..................................................... 23 2 11 0.27 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................TTGGTGTTAGTGTCGGTTAGGGTG............... 24 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................GTGTTGGTGTTAGTGTCGGTTAG................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGTTAGTGTCGGTTAGGGTG............... 21 0 12 0.25 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................GTGTTGGTGTTAGTGTCGGTTAGGGT................ 26 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGTTAGTGTCGGTTAGGGTGGTTG........... 24 0 12 0.25 3 2 1 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTTGCCTAG.................................................................................................................... 21 1 12 0.25 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................TGTTGGTGTTAGTGTCGGTTAGGGT................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................GTGTTGGTGTTAGTGTCGGT...................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TAGTGTCGGTTAGGGTGGTTG........... 21 0 12 0.25 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................GTGTTGGTGTTAGTGTCGGTT..................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TCGGTTAGGGTGGTTGTGGT....... 20 0 13 0.23 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................GGTTAGGGTGGTTGTGGTT...... 19 0 13 0.23 3 3 0 0 0 0 0 0 0
.............................................................................................GGCAACGCTTAGCTTGAACC............................................................................................ 20 0 9 0.22 2 2 0 0 0 0 0 0 0
...............................................................................................................................CGCCCAGCTAGGCTCGGTATCGG....................................................... 23 0 9 0.22 2 2 0 0 0 0 0 0 0
...............................................................................................................................CGCCCAGCTAGGCTCGGTATC......................................................... 21 0 9 0.22 2 2 0 0 0 0 0 0 0
......................................................................TGTGTGTGTGCTTGCCTAG.................................................................................................................... 19 1 14 0.21 3 3 0 0 0 0 0 0 0
............................................................................TGTGCTGGCCTAGCTTGGGCAACG......................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TTGTGTTGGTGTTAGTGTCGGTT..................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTGATGTTTGTGTCGGTTAGGG................. 22 2 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GGTGTTTGTGTCGGTTAGGGTG............... 22 1 5 0.20 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................TGATGTTTGTGTCGGTTAGGGT................ 22 2 5 0.20 1 1 0 0 0 0 0 0 0
.......................................................................................AGCTTGGGCAACGCTTAGCTTGAACCA........................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GATGTTTGTGTCGGTTAGGGT................ 21 2 10 0.20 2 2 0 0 0 0 0 0 0
.................................................................................TGGCCTAGCTTGGGCAACGC........................................................................................................ 20 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................................TGGGCAACGCTTAGCTTGAACCA........................................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................GTGTGCTGGCCTAGCTTGGGCAACG......................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................................GTGTGTGCTGGCCTAGCTTGGGCAACG......................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................................................................................CTTGGGCAACGCTTAGCTTGA............................................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0
............................................................................................................................CGTCGCCCAGCTAGGCTCGGTAT.......................................................... 23 0 10 0.20 2 2 0 0 0 0 0 0 0
................................................................GGTGTGTGTGTGTGTGCTTGCCTAGC................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................................TGGGCAACGCTTAGCTTGAA.............................................................................................. 20 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTGATGTTTGTGTCGGTTAGGGT................ 24 2 5 0.20 1 1 0 0 0 0 0 0 0
...............................................................................................................................CGCCCAGCTAGGCTCGGTAT.......................................................... 20 0 10 0.20 2 1 1 0 0 0 0 0 0
........................................................................................GCTTGGGCAACGCTTAGCTT................................................................................................. 20 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................................TGGGCAACGCTTAGCTTGAACCAA.......................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0
..................................................................................GGCCTAGCTTGGGCAACGC........................................................................................................ 19 0 5 0.20 1 1 0 0 0 0 0 0 0
...............................................................................GCTGGCCTAGCTTGGGCAACGC........................................................................................................ 22 0 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................................TGGGCAACGCTTAGCTTGAACC............................................................................................ 22 0 5 0.20 1 1 0 0 0 0 0 0 0
............................................................................TTTGCTGGCCTAGCTTGGGCAACG......................................................................................................... 24 1 5 0.20 1 1 0 0 0 0 0 0 0
.............................................................................................................................................CCTTATCGGGTCGGACTGGC............................................ 20 3 5 0.20 1 1 0 0 0 0 0 0 0
...........................................................................GTGTGCTGGCCTAGCTTGGGCAACGC........................................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTGATGTTTGTGTCGGTTAGGGT................ 23 2 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................................................TTGGGCAACGCTTAGCTTGAACC............................................................................................ 23 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................GCTTGGGCAACGCTTAGCT.................................................................................................. 19 0 5 0.20 1 0 0 0 1 0 0 0 0
..........................................................................TGTGTGCTGGCCTAGCTTGGGCAACGC........................................................................................................ 27 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................................................................................CTAGCTTGGGCAACGCTTAGCTTGAAC............................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................GCTTGGGCAACGCTTAGCTGG................................................................................................ 21 1 5 0.20 1 0 0 0 0 0 1 0 0
...........................................................................................................................TCGTCGCCCAGCTAGGCTCGGTA........................................................... 23 0 10 0.20 2 2 0 0 0 0 0 0 0
..................................................................................................................................CCAGCCAGGCTCGGTATCGGGT..................................................... 22 1 11 0.18 2 2 0 0 0 0 0 0 0
.......................................................................ATGTGTGTGCTGGCCTAGCT.................................................................................................................. 20 1 11 0.18 2 2 0 0 0 0 0 0 0
..................................................................................................................................CCAGCTAGGCTCGGTATC......................................................... 18 0 11 0.18 2 2 0 0 0 0 0 0 0
....................................................................................................................................AGCTAGGCTCGGTATCGGG...................................................... 19 0 11 0.18 2 2 0 0 0 0 0 0 0
.....................................................................................................................................GCTAGGCTCGGTATCGGG...................................................... 18 0 11 0.18 2 2 0 0 0 0 0 0 0
...........................................................................GTGTGCTGGCCTAGCTTGGGC............................................................................................................. 21 0 6 0.17 1 1 0 0 0 0 0 0 0
...........................................................................GTGTGCTGGCCTAGCTTGGGCA............................................................................................................ 22 0 6 0.17 1 0 0 0 0 1 0 0 0
................................................................GGTGTATGTTTGTGTGCTTGCCTAGC................................................................................................................... 26 3 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................GTGTGTGCTGGCCTAGCTTG................................................................................................................ 20 0 6 0.17 1 0 0 1 0 0 0 0 0
......................................................................TGTGTGTGTGCTGGCCTAGCTTGGG.............................................................................................................. 25 0 6 0.17 1 1 0 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTGGCCTAGCTT................................................................................................................. 24 0 6 0.17 1 1 0 0 0 0 0 0 0
......................................................................TGTGTGTGTGCTGGCCTAGCTTGGGC............................................................................................................. 26 0 6 0.17 1 1 0 0 0 0 0 0 0
..................................................................TGTGTGTGTGTGTGCTGGCC....................................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCTCGGTATCGGGTCATA................................................. 27 2 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................AGCTCGTCGCCCAGCTAGGC................................................................. 20 0 12 0.17 2 2 0 0 0 0 0 0 0
...................GTTTGGCTGCGCGCCCTCGTCT.................................................................................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0
.............................................................................GTGCTGGCCTAGCTTGGGC............................................................................................................. 19 0 6 0.17 1 1 0 0 0 0 0 0 0
...........................................................................CTGTGCTGGCCTAGCTTGGGC............................................................................................................. 21 1 6 0.17 1 0 1 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTGGCCTAGC................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTGGCCTA..................................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0
...................................................................GTGTGTGTGTGTGCTGGCCTA..................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................GTGTGTGCTGGCCTAGCTTGGGCA............................................................................................................ 24 0 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................TTGTGTGCTGGCCTAGCTTGGGC............................................................................................................. 23 1 6 0.17 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GGTTAGGGTGGTTGTGGTTTT.... 21 0 13 0.15 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................TTAGGGTGGTTGTGGTTTT.... 19 0 13 0.15 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCGGTTAGGGTGGTTG........... 18 0 13 0.15 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................................GTCGGTTAGGGTGGTTGTGGTTT..... 23 0 13 0.15 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................AGGGTGGTTGTGGTTTTGC.. 19 0 13 0.15 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................GGGTGGTTGTGGTTTTGCT. 19 0 13 0.15 2 2 0 0 0 0 0 0 0
........................................................................AGTGTGTGCTGGCCTAGCT.................................................................................................................. 19 1 7 0.14 1 1 0 0 0 0 0 0 0
......................................................................................AAGCTTGGGCAAAGCTTAGCTTGAACC............................................................................................ 27 2 7 0.14 1 1 0 0 0 0 0 0 0
.......................................................................TTGTGTGTGCTGGCCTAGCT.................................................................................................................. 20 1 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................CTGTGTGTGTGCTGGCCTAGCT.................................................................................................................. 22 1 7 0.14 1 0 1 0 0 0 0 0 0
.......................................................................GTGTGTGTGCTGGCCTAGCG.................................................................................................................. 20 1 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................AATGTGTGCTGGCCTAGCT.................................................................................................................. 19 2 7 0.14 1 1 0 0 0 0 0 0 0
....................................................................AAAGTGTGTGTGCTGGCCTAGCT.................................................................................................................. 23 3 7 0.14 1 1 0 0 0 0 0 0 0
...................................................................CTGTGTGTGTGTGCTGGCCT...................................................................................................................... 20 1 7 0.14 1 0 1 0 0 0 0 0 0
.....................................................................GTGTGTGTGTGCTGGCCTAGCC.................................................................................................................. 22 1 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................AGTGTGTGCTGGCCTAGCTT................................................................................................................. 20 1 7 0.14 1 1 0 0 0 0 0 0 0
......................................................................AGTGTGTGTGCTGGCCTAGCTTC................................................................................................................ 23 2 7 0.14 1 1 0 0 0 0 0 0 0
.......................................................................GCGTGTGTGCTGGCCTAGCT.................................................................................................................. 20 1 7 0.14 1 0 1 0 0 0 0 0 0
..........................................................................TGTGTGCTGGCCTAGCTTC................................................................................................................ 19 1 7 0.14 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TGTTAGGGTGGTTGTGGTTTT.... 21 1 14 0.14 2 0 0 0 0 1 1 0 0
...............................................................CGGTGTATGTTTGTGTGCTTGCCT...................................................................................................................... 24 3 7 0.14 1 1 0 0 0 0 0 0 0
.......................................................................GTGTGTGTGTTGGCCTAGCT.................................................................................................................. 20 1 7 0.14 1 0 1 0 0 0 0 0 0
....................................................................AGTGTGTGTGTGCTGGCCT...................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCTCGGTATCGGGTCGG.................................................. 26 0 8 0.13 1 1 0 0 0 0 0 0 0
..................................................................CCTGTGTGTGTGTGCTGGCCT...................................................................................................................... 21 2 8 0.13 1 0 1 0 0 0 0 0 0
........................................................................................................................................AGGCTCGGTATCGGGTCGG.................................................. 19 0 8 0.13 1 1 0 0 0 0 0 0 0
.....................................................................GTGTCTATGTGCTGGCCTAGC................................................................................................................... 21 2 8 0.13 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................GGTTAGGGTGGTTGTGGCTTTGC.. 23 1 17 0.12 2 2 0 0 0 0 0 0 0
............................................................................................................................CGTCGCCCAGCTAGGCTCGGTATCGGGT..................................................... 28 0 9 0.11 1 1 0 0 0 0 0 0 0
...............................................................................................................................CGCCCAGTTAGGCTCGGTATCGGG...................................................... 24 1 9 0.11 1 1 0 0 0 0 0 0 0
..................................................................TGTGTGTGTGTGTGCTTGCCTAGC................................................................................................................... 24 1 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TGGTGTCAGTGTCGGTTAGGGTC............... 23 2 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................TTCGCCCAGCTAGGCTCGGTATCGGGT..................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TCGGTGTTAGTGTCGGTTAGGGTG............... 24 1 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................TGCAACGCTTAGCTTGAACCA........................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTGGTGTCAGTGTCGGTTAGGGTC............... 24 2 9 0.11 1 1 0 0 0 0 0 0 0
..............................................................................................................................CCGCCCAGCTAGGCTCGGTATCGGGT..................................................... 26 1 9 0.11 1 1 0 0 0 0 0 0 0
..............................................................................................................................TCGCCCAGCTAGGCTCGGTATCGG....................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0
..................................................................TGTGTGTGTGTGTGCTGGC........................................................................................................................ 19 0 9 0.11 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................GGTGTTAGTGTCGGTTAGGG................. 20 0 9 0.11 1 1 0 0 0 0 0 0 0
...............................................................................................................................CGCCCACCTAGGCTCGGTATCGGGT..................................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................CAAGCTCGTTGCCCAGCTAGGCTCGGTA........................................................... 28 1 9 0.11 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................GGTGTTAGTGTCGGTTAGG.................. 19 0 9 0.11 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TGGTGTCAGCGTCGGTTAGGGTC............... 23 3 9 0.11 1 1 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCTCGGTATCGGGTTG................................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0
........................................................................................................................TGCTCGTCGCCCAGCTAGGCT................................................................ 21 1 10 0.10 1 0 0 0 0 1 0 0 0
...............................................................................................................................CGCCCAGCTAGGCTCGGTA........................................................... 19 0 10 0.10 1 1 0 0 0 0 0 0 0
...............................................................................................................................CGCCCAGCTAGGCTCGGCAT.......................................................... 20 1 10 0.10 1 0 0 0 0 0 1 0 0
.............................................................................................................................GTCGCCCAGCTAGGCTCGGT............................................................ 20 0 10 0.10 1 1 0 0 0 0 0 0 0
..............................................................................................................................TCGCCCAGCTAGGCTCGGTA........................................................... 20 0 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................................................................ATCGTCGCCCAGCTAGGCTCGGTAT.......................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCCAGCTAGGCCCGGTATCGGGT..................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCCAGCTGGGCTCGGTATCGGGT..................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0
...........................................................................................................................TCGTCGCCCAGCTAGGCTCGGT............................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0
..............................................................................................................................TCGCCCAGCTAGGCTCGGTAT.......................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................GTCGCCCAGCTAGGCTCG.............................................................. 18 0 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................................................................CTCGTCGCCCAGCTAGGCTCGGTAT.......................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCCAGCTAGGCTCGGTATCAGGTT.................................................... 25 2 10 0.10 1 1 0 0 0 0 0 0 0
..........................................................................................................................CTCGCCGCCCAGCTAGGCTCGGTAT.......................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCCCGCTAGGCTCGGTATCGGGT..................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TGATGTTTGTGTCGGTTAGGGTCGTTG........... 27 3 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCCAGCTAGACTCGGTATCGGGT..................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................ATCGCCCAGCTAGGCTCGGTAT.......................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TGATGTTTGTGTCGGTTAGGGTCGTT............ 26 3 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................AGCAACGCTTAGCTTGAAC............................................................................................. 19 1 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................GCCGCCCAGCTAGGCTCGGT............................................................ 20 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................GGTGTATGTTTGTGTGCTTGCCT...................................................................................................................... 23 3 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCCAGCTAGTCTCGGTATCGGGT..................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCCAGCTAGGCTCGGTATCGGGTC.................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0
........................................................................................................................AGCTCGTCGCCCAGCTAGGCT................................................................ 21 0 10 0.10 1 1 0 0 0 0 0 0 0
...............................................................................................................................AGCCCAGCTAGGCTCGGTATCGGG...................................................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0
....................................................................TGTATGAGTGTGCTGTCCTAGC................................................................................................................... 22 3 10 0.10 1 0 0 0 1 0 0 0 0
.........................................................................................................................GCTCGTCGCCCAGCTAGGCT................................................................ 20 0 10 0.10 1 1 0 0 0 0 0 0 0
..................................................................................................................................CAAGCTAGGCTCGGTATCGGGT..................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
......................................................................AATGTGTGTGCTGGCCTAGCT.................................................................................................................. 21 2 11 0.09 1 1 0 0 0 0 0 0 0
..................................................................................................................................CCAGCTAGGCTCGTTATCGGGT..................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................CAGCTAGGCTCGGTATCGGTT..................................................... 21 1 11 0.09 1 0 0 0 0 0 1 0 0
.................................................................................................................................CCCAGCCAGGCTCGGTATCGGGT..................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................GTGTGTGTGTGTGCTTGCCTAGC................................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCTCAGTATCGGGT..................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCTCGGTGTCGGGT..................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0
.......................................................................AAGTGTGTGCTGGCCTAGCT.................................................................................................................. 20 2 11 0.09 1 1 0 0 0 0 0 0 0
..................................................................................................................................CCAGCTAGGCTCGGTATCGGTT..................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
..................................................................................................................................CCAGCTAGGCTCGGTATCGGCT..................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
............................................................................................................................CGCCCCCCAGCTAGGCTCGGTAT.......................................................... 23 2 11 0.09 1 0 0 0 1 0 0 0 0
.......................................................................................................................................................................TGATGTTTGTGTCGGTTAGGGTCG.............. 24 3 11 0.09 1 1 0 0 0 0 0 0 0
.................................CCTTGTCTCGCGGTTTTGCCGGTT.................................................................................................................................................... 24 2 11 0.09 1 1 0 0 0 0 0 0 0
.....................................................................................................................................GCTAGGCTCGGTATCGGGT..................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0 0
............................................................................................................................CGTCTCCCAGCTAGGCTCGGTAT.......................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0
..................................................................................................................................CCAGCTAGGCTCTGTATCGGGT..................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0
CTTCTGCCTCCTCTCGTCCG......................................................................................................................................................................................... 20 1 11 0.09 1 0 0 0 0 0 1 0 0
..................................................................................................................................ACAGCTAGGCTCGGTATCGGG...................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0 0
...................................................................................................................................AAGCTAGGCTCGGTATCGGGT..................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0 0
............................................................................................................................CGTCGCCCAGCTAGGC................................................................. 16 0 12 0.08 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................GTTAGTGTCGGTTAGGGTGGT............. 21 0 12 0.08 1 1 0 0 0 0 0 0 0
......................................................................AAAGTGTGTGCTGGCCTAGCT.................................................................................................................. 21 3 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................AGTGTCGGTTAGGGTGGTTGT.......... 21 0 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGTTAGTGTCGGTTAGGGTGGTT............ 23 0 12 0.08 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................TTAGTGTCGGTTAGGGTGGTTG........... 22 0 12 0.08 1 1 0 0 0 0 0 0 0
.............................................GTTTTGCCGGTTGCCCGTCG............................................................................................................................................ 20 1 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGTTAGTGTCGGTTAGGGTGGT............. 23 0 12 0.08 1 0 1 0 0 0 0 0 0
.....................................................................GTGTGTGTGTGCTTGCCTAGCT.................................................................................................................. 22 1 12 0.08 1 1 0 0 0 0 0 0 0
.........................................................................................................................GCTCGTCGCCCAGCTAGGC................................................................. 19 0 12 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................AGGGTGGTTGTGGTTTTGCT. 20 0 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................CCCAGCTAGGCACGGTATCGGG...................................................... 22 1 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................GTGTCGGTTAGGGTGGTTGTGGT....... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
......................................................................TGTGTGTGTGCTTGCCTAGCT.................................................................................................................. 21 1 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................GTCGGTTAGGGTGGTTGTGGTT...... 22 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................CGGTTAGGGTGGTTGTGGTT...... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................CGGTTAGGGTGGTTGTGGTTTTGCT. 25 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................GTGTGTGTGTGCTTGCCTAG.................................................................................................................... 20 1 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TCGGTTAGGGTGGTTGTGGTTT..... 22 0 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TCGGTTAGGGTGGTTGTGGTT...... 21 0 13 0.08 1 1 0 0 0 0 0 0 0
..................................CTTGTCTCGCGGTTTTGCCGGT..................................................................................................................................................... 22 2 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GGTTAGGGTGGTTGTGGTTTTGC.. 23 0 13 0.08 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................ATAGGGTGGTTGTGGTTTTG... 20 1 13 0.08 1 0 0 0 0 1 0 0 0
....................................................................................................................................................................................GGTTAGGGTGGTTGTGGTTT..... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GGTTAGGGTGGTTGTGGT....... 18 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TTGTCGGTTAGGGTGGTTG........... 19 1 13 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................TGTCGGTTAGGGTGGTTGTGGTT...... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................GTGTGTGTGCTTGCCTAGCT.................................................................................................................. 20 1 13 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................TTCGGTTAGGGTGGTTGTGGT....... 21 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................GTGTGTGTGCTTGCCTAGCTT................................................................................................................. 21 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................TAGGGTGGTTGTGGTTTT.... 18 0 13 0.08 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................AGTCGGTTAGGGTGGTTG........... 18 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................TAGGGTGGTTGTGGTTTTGC.. 20 0 13 0.08 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTTAGGGTGGTTGTGGTTT..... 19 0 13 0.08 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................GTGTCGGTTAGGGTGGTTGT.......... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................GTATGTGTGCTTGCCTAGC................................................................................................................... 19 2 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................ATGGTGGTTGTGGTTTTGC.. 19 1 13 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................GGTGGTTGTGGTTTTGCTG 19 0 13 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................CTTATCGGGTCGGACTGGC............................................ 19 3 14 0.07 1 1 0 0 0 0 0 0 0
..........................................................................................................................CTCGTCGCCCAGCTAGGATC............................................................... 20 1 14 0.07 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................................AGGTTAGGGTGGTTGTGGT....... 19 1 14 0.07 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................AACGGTTAGGGTGGTTGTGGT....... 21 2 15 0.07 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................AATGTGTCGGTTAGGGTGGTT............ 21 3 16 0.06 1 1 0 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTTGCCTA..................................................................................................................... 20 1 16 0.06 1 0 1 0 0 0 0 0 0
..................................................................AAAGTGTGTGTGTGCTGGCCT...................................................................................................................... 21 3 17 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGTTAGTGTCGGTTAGGGT................ 19 0 17 0.06 1 1 0 0 0 0 0 0 0
......................................TCTCGCGCTCTTGCAGGTTG................................................................................................................................................... 20 3 17 0.06 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................GGTTAGGGTGGTTGTGGCTTTG... 22 1 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGTTAGTGTCGGTTAGGGT................ 20 0 17 0.06 1 1 0 0 0 0 0 0 0
......................................................................AGTATGTGTGCTTGCCTAGC................................................................................................................... 20 3 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGTTAGGGTCGGTTAGGGT................ 20 1 17 0.06 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................ATGTTAGTGTCGGTTAGGGT................ 20 1 17 0.06 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TCGGTTAGGGTGGTTGTGGCTC..... 22 2 17 0.06 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................TGTGTTAGTGTCGGTTAGG.................. 19 1 18 0.06 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAAGGTGGTTGTGGTTTTGC.. 20 2 18 0.06 1 1 0 0 0 0 0 0 0
....................................................................TGTGTGTGTGTGCTTGCCTATC................................................................................................................... 22 2 18 0.06 1 0 0 0 0 0 1 0 0
...................................................................................................................................TAGCTAGGCTCGGTTTCGAG...................................................... 20 3 18 0.06 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................GTTATGGTGGTTGTGGGTTT.... 20 2 19 0.05 1 1 0 0 0 0 0 0 0
......................................................................TGTGTGTGTGCTTGCCTA..................................................................................................................... 18 1 19 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................ATGTTTGTGTCGGTTAGGGT................ 20 2 19 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................TTTGTGTCGGTTAGGGTTGTTG........... 22 2 19 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................AACAGCTAGGCTCGGTAT.......................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 Unknown_group_95:5433-5637 + dps-mir-2518-4 Known_mirbase GAAGACGGAGGAGAGCTGGCAAGCCGACGCGCGGGAGCAGAGCGCAAAAACG-GCCAACGGGCAGCCACACA--CACACACACGACCGGATCGAACCCGTTGCGAATCGAACTTGGTTTGAGTTCGAG----CAGCGGGTCGATCCGAGCCATAGCCCA--------------------------------GCCTGACCCATCACAACCACAATCACAGCCAATCCCACCAACACCA----AAACGAC-----------------------------------
droPer2 scaffold_2866:692-898 - GAAGTCGGAGGAGAGCTGGCAAGCCGACGCGCAGGAGCAGAGCGCCAAAACG-GCCAACGGGCAGCCACACACACACACACACGAACGGATCGAACCCGTTGCGAGACGAACTTGGTTCGAGTTCGAG----CAACGGGTCGATCCAAGCCATAGCCCA--------------------------------GCCAGCAACTACACAACCGCAAACACAGCCAATCCCACCAACACCA----AAACGAC-----------------------------------
droVir3 scaffold_13246:2557297-2557304 - AAAACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------------------------------
droMoj3 scaffold_6482:1229833-1229952 + AGCGCACTG---------------------------------TGCATCAAGC-AG----------------------------------------------------------GAGCTGGAGGATGAG----GAGCAGCTTGAGCAGACACA--------GCACCAGGAACTGGACCTAGATCA--------------------GCATCACGATCTCGACCAGGACCACGACAATGA----CAGCAAC-----------------------------------
droGri2 scaffold_8095:3969-4031 + TGGCATTTCGTCAGGCGG-----------------AGCATGGCAAAGCGACA-ACCAACACACTCACACACA--CACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC--------------------------------
droAna3 scaffold_13513:6806-6861 - GGAGAAGAG---------------------------------CCCGCCAAAA-ATAAATGCAAATACACACA--CACACACACAGCCAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------
droBip1 scf7180000393161:6019-6061 + GCCAC-----------------------------------------------------TATGCAGCCACGCA--CACACACACACACGCATTGCTC---------------------------------------------------------------------------------------------------------------------------------------------------------CC--------------------------------
droFic1 scf7180000453829:1092815-1092850 + CAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATCGCAGGGAATCTCA----CAGGG----AAATGGT-----------------------------------
droRho1 scf7180000779324:22812-22868 + TCATGCTTAGTTT----------------------------------------------------------------------------------------------------------GGGTCCGAT----CAGCGGGTTCAGCTGCGTCATGTAACA--------------------------------GCA--------------------------------------C----A----------GCC--------------------------------
droBia1 scf7180000302126:3507736-3507824 + GCAGCAGCAGCAGCAACAGCAA----------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAGCAACATCAGCCAGCA--------------------------------------C----AG--CAGCAAC--ATGCACATGCCCTGCTCGTAGACGTGGTGAATC
droTak1 scf7180000415377:398096-398129 + GGGGACGAGGACGGGCGGACTGGCCGACGGGCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:6941644-6941674 + CCCAC------------------------------------------------------GTTCAGACACACA--CACACACACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC--------------------------------
droSec2 scaffold_7:206273-206458 + GCAGCTATTGCCCGGCACATGGACCGCCGGCCGT-GGCAG--CCCCAAATGGCG-CCATCGGCCATCATCCCCACATTCATGCCCATCCTCCGCACACCCATTCGCATGCCCATCCTCCCCATTCGCATCACGCACAG--------------------CAGCAACAGCAACAGCAGCAGCAGCA--------------------G---------------CAGCTTCATCATCACC-AT--CAGCAAC-----------------------------------
droYak3 3R:15187919-15188005 + TAAGCCTGCGCAAGGCGCGCAAAAGGACACGCGCACACACAGAGCCGCACTC-ACCCACACACAGACACACA--CCCACACACACACGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:14517685-14517744 - GCCGTAGCCA----------------------------------------------------------------------------------------------------------------------------------------------------TGACAACAGCAACACCAACGACACCA--------------------A---------CAACACCAACCA------CACC-AACA-------ACA--------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAAGACGGAGGAGAGCTGGCAAGCCGACGCGCGGGAGCAGAGCGCAAAAACG-GCCAACGGGCAGCCACACA--CACACACACGACCGGATCGAACCCGTTGCGAATCGAACTTGGTTTGAGTTCGAG----CAGCGGGTCGATCCGAGCCATAGCCCA--------------------------------GCCTGACCCATCACAACCACAATCACAGCCAATCCCACCAACACCA----AAACGAC-----------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGC.....................................................................................................................................2310156.201562015083108015000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCC....................................................................................................................................241052.90529052610101000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAG......................................................................................................................................221052.405240496601408000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCA...................................................................................................................................251019.10191018500006000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGA.......................................................................................................................................211014.601461130101103000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGC.....................................................................................................................................221010.70107010700000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGT.....................................................................................................................................23105.805805520100000
...........................................................................................................................................................................................................................CCAATCCCACCAACACCA----AAACGAC-----------------------------------25134.2355037130200120
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGA.....................................................................................................................................23104.104104100000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGCC....................................................................................................................................23103.503503500000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCG........................................................................................................................................20123.003603600000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAG......................................................................................................................................21102.802802800000000
...........................................................................................................................................................................................................................CCAATCCCACCAACACCA----AAACGA....................................24132.3831019000001200
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCAT..................................................................................................................................26101.801801800000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGCCA...................................................................................................................................24101.501501500000000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGC.....................................................................................................................................21101.401401310000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCT...................................................................................................................................25101.201201200000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCC.........................................................................................................................................19161.191901800100000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGCCATAGC...............................................................................................................................2791.0090900000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCA....................................................................................................................................24100.8080800000000
..........................................................................................TCGAACCCGTTGCGAATCGAACTTG........................................................................................................................................................................2550.8040400000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCT....................................................................................................................................24100.8080600002000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGCCATAG................................................................................................................................2690.7870700000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGA.......................................................................................................................................20100.7070600001000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAG......................................................................................................................................20100.7070600100000
..........................................................................................................................TTCGAG----CAGCGGGTCGATCCGAGC.....................................................................................................................................2460.6740400000000
...........................................................................................CGAACCCGTTGCGAATCGAACTTGG.......................................................................................................................................................................2550.6030300000000
..........................................................................................TCGAACCCGTTGCGAATCGAACTTGG.......................................................................................................................................................................2650.6030300000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGAA....................................................................................................................................24100.6060510000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAAA.....................................................................................................................................23100.6060510000000
....................................................................................................................................CAGCGGGTCGATCCGAGCCATAGC...............................................................................................................................2490.5650410000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGTT....................................................................................................................................24100.5050500000000
............................................................................................................................................................................................................CAACCACAATCACAGCCAATCCCA.......................................................2440.5020200000000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGCCA...................................................................................................................................23100.5050500000000
..........................................................................................................................TTCGAG----CAGCGGGTCGATCCGAG......................................................................................................................................2360.5030300000000
....................................................................................................................................CAGCGGGTCGATCCGAGCCATAGCCC.............................................................................................................................2690.4440310000000
............................................................................................................................CGAG----CAGCGGGTCGATCCG........................................................................................................................................19120.4250500000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAA......................................................................................................................................22100.4040400000000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGCC....................................................................................................................................22100.4040400000000
...........................................................................................................................................................................................................................CCAATCCCACCAACACCA----AAACG.....................................23130.3850500000000
.......................................................................................................................................CGGGTCGATCCGAGCCATAGCCCA--------------------------------GC..........................................................................................2680.3830300000000
..........................................................................................................................................GTCGATCCGAGCCATAGCCCA--------------------------------GC..........................................................................................2390.3330100001100
...............................................AAACG-GCCAACGGGCAGCC........................................................................................................................................................................................................................1930.3310100000000
................................................AACG-GCCAACGGGCAGCCAC......................................................................................................................................................................................................................2030.3310100000000
..............................................................................................................................AG----CAGCGGGTCGATCCGAGCCATAGC...............................................................................................................................2690.3330300000000
.....................................................................................................................................AGCGGGTCGATCCGAGCCATAGC...............................................................................................................................2390.3330300000000
..........................................................................................................................TTCGAG----CAGCGGGTCGATCCGAGCC....................................................................................................................................2560.3320200000000
....................................................................................................................................CAGCGGGTCGATCCGAGCCATAG................................................................................................................................2390.3330300000000
...........................................................................................................................TCGAG----CAGCGGGTCGATC..........................................................................................................................................18160.3150500000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGT.....................................................................................................................................22100.3030300000000
..............................................................................................................................AG----CAGCGGGTCGATCCGAGC.....................................................................................................................................20100.3030300000000
.......................................................................................................................................CGGGTCGATCCGAGCCATAGCCC.............................................................................................................................23100.3030210000000
...........................................................................................................................................TCGATCCGAGCCATAGCCCA--------------------------------G...........................................................................................21110.2730300000000
............................................................................................................................................CGATCCGAGCCATAGCCCA--------------------------------GCC.........................................................................................2280.2520200000000
............................................................................................................................................................................................................CAACCACAATCACAGCCAATCCCACCAA...................................................2840.2510100000000
............................................................................................................................................................................................................................CAATCCCACCAACACCA----AAACGAC-----------------------------------24130.2330300000000
.....................................................................................................................................AGCGGGTCGATCCGAGCCATAGCC..............................................................................................................................2490.2220200000000
...............................................................................................CCCGTTGCGAATCGAACTTGGTT.....................................................................................................................................................................2390.2220200000000
...........................................................................................................................................TCGATCCGAGCCATAGCCCA--------------------------------GC..........................................................................................2290.2220200000000
......................................................................................................................................GCGGGTCGATCCGAGCCATAGC...............................................................................................................................2290.2220200000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCATAG................................................................................................................................2890.2220200000000
....................................................................................................................................CAGCGGGTCGATCCGAGCCATAGCC..............................................................................................................................2590.2220200000000
........................................................................................GATCGAACCCGTTGCGAATCGAACTTG........................................................................................................................................................................2750.2010100000000
....................................................................................................................................CAGCGGGTCGATCCGAGC.....................................................................................................................................18100.2020200000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGA.....................................................................................................................................22100.2020200000000
..............................................................................................................................AG----CAGCGGGTCGATCCGAGCC....................................................................................................................................21100.2020200000000
.......................................................................................................................................CGGGTCGATCCGAGCCATAGCCCA--------------------------------G...........................................................................................25100.2020200000000
.......................................................................................GGATCGAACCCGTTGCGAATCGAACT..........................................................................................................................................................................2650.2010100000000
.......................................................................................................................................CGGGTCGATCCGAGCCATAGCC..............................................................................................................................22100.2020200000000
...........................................................................................CGAACCCGTTGCGAATCGAACTTG........................................................................................................................................................................2450.2010100000000
........................................................................................GATCGAACCCGTTGCGAATCG..............................................................................................................................................................................2150.2010100000000
...........................................................................................CGAACCCGTTGCGAATCGAACTTGGTT.....................................................................................................................................................................2750.2010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCAA..................................................................................................................................26100.2020200000000
..........................................................................................TCGAACCCGTTGCGAATCGAACTTGGTT.....................................................................................................................................................................2850.2010100000000
.................................................................................ACGACCGGATCGAACCCGTTGCG...................................................................................................................................................................................2350.2010100000000
............................................................................................GAACCCGTTGCGAATCGAACTTGGT......................................................................................................................................................................2550.2010100000000
.........................................................................................ATCGAACCCGTTGCGAATCGAACT..........................................................................................................................................................................2450.2010100000000
..........................................................................................TCGAACCCGTTGCGAATCGAA............................................................................................................................................................................2150.2010100000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGCCATA.................................................................................................................................26100.2020200000000
............................................................................................GAACCCGTTGCGAATCGAAC...........................................................................................................................................................................2050.2010100000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGCCAT..................................................................................................................................25100.2020200000000
...........................................................................................................................TCGAG----CAGCGGGTCGATA..........................................................................................................................................18160.1930200100000
................................................................................................................................................................................................................CACAATCACAGCCAATCCCACCAACACC...............................................28120.1720200000000
..........................................................................CACACACACGACCGGATCGAACCCGT.......................................................................................................................................................................................2660.1710000001000
.....................................................................................................................................................................................................................TCACAGCCAATCCCACCAACACCA----A.........................................25120.1720200000000
.................................................................................................................................................................................................................ACAATCACAGCCAATCCCACCAAC..................................................24120.1720200000000
....................................................................CACA--CACACACACGACCGGAT................................................................................................................................................................................................2160.1710100000000
..................................................................CACACA--CACACACACGACCGG..................................................................................................................................................................................................2160.1710100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCATT.................................................................................................................................27120.1720200000000
..........................................................................CACACACACGACCGGATCGAAC...........................................................................................................................................................................................2260.1710100000000
......................................................................................CGGATCGAACCCGTTGCGAAT................................................................................................................................................................................2160.1710100000000
.................................................................................................................................................................................................................ACAATCACAGCCAATCCCACCAACACC...............................................27120.1720110000000
.....................................................................ACA--CACACACACGACCGGATC...............................................................................................................................................................................................2160.1710100000000
..................................................................CACACA--CACACACACGACCGGATCG..............................................................................................................................................................................................2560.1710000001000
............................................................................CACACACGACCGGATCGAACCCGT.......................................................................................................................................................................................2460.1710000001000
.....................................................................ACA--CACACACACGACCGGATCGA.............................................................................................................................................................................................2360.1710100000000
...............................................................................................................................................................................................................................TCCCACCAACACCA----AAACGA....................................20130.1520200000000
..........................................................................................................................................................................................................................GCCAATCCCACCAACACCA----AAACGA....................................25130.1520200000000
............................................................................................................................................................................................................................CAATCCCACCAACACCA----AAACGA....................................23130.1520200000000
...........................................................................ACACACACGACCGGATCGA.............................................................................................................................................................................................1970.1410100000000
......................................................................................................................................GCGGGTCGATCCGAGCCATAGCCCA--------------------------------GC..........................................................................................2770.1410100000000
........................................................................................................................................GGGTCGATCCGAGCCATAGCCCA--------------------------------GCC.........................................................................................2680.1310100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCA.........................................................................................................................................19160.1320200000000
..........................................................................................................................................GTCGATCCGAGCCATAGCCCA--------------------------------GCC.........................................................................................2480.1310100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATT..........................................................................................................................................18160.1320200000000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGCCATAGA...............................................................................................................................2790.1110100000000
.........................................................................................................................................GGTCGATCCGAGCCATAGCCCA--------------------------------GC..........................................................................................2490.1110100000000
.....................................................................................................................................AGCGGGTCGATCCGAGCCATAGCCC.............................................................................................................................2590.1110100000000
......................................................................................................................................GCGGGTCGATCCGAGCCATAGCCCA--------------------------------G...........................................................................................2690.1110100000000
............................................................................................................................................CGATCCGAGCCATAGCCCA--------------------------------GC..........................................................................................2190.1110100000000
....................................................................................................TGCGAATCGAACTTGGTA.....................................................................................................................................................................1890.1110100000000
...............................................................................................................................G----CAGCGGGTCGATCCGAGCCATAGCCC.............................................................................................................................2790.1110100000000
......................................................................................................................................GCGGGTCGATCCGAGCCATAGCCC.............................................................................................................................2490.1110001000000
...............................................................................................................................G----CAGCGGGTCGATCCGAGCCATAGC...............................................................................................................................2590.1110010000000
...................................................................................................TTGCGAATCGAACTTGGTT.....................................................................................................................................................................1990.1110100000000
....................................................................................................................................CAGCGGGTCGATCCGAGCCATAGCCCT--------------------------------............................................................................................2790.1110100000000
....................................................................................................................................CAGCGGGTCGATCCGAGCCATAGCCCA--------------------------------............................................................................................2790.1110100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATAA.........................................................................................................................................19190.1120000000200
...............................................................................................................................G----CAGCGGGTCGATCCGAGC.....................................................................................................................................19100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGAAC...................................................................................................................................25100.1010100000000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGCCATAA................................................................................................................................26100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGATT.....................................................................................................................................23100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAT......................................................................................................................................22100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGTGT...................................................................................................................................25100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGTA....................................................................................................................................24100.1010100000000
.......................................................................................................................................CGGGTCGATCCGAGCCATAGC...............................................................................................................................21100.1010100000000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGAA....................................................................................................................................22100.1010100000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGTA....................................................................................................................................23100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGAT....................................................................................................................................24100.1010100000000
...............................................................................................................................G----CAGCGGGTCGATCCGAGCCA...................................................................................................................................21100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCATA.................................................................................................................................27100.1010100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGAGCCC...................................................................................................................................25100.1010100000000
............................................................................................................................CGAG----CAGCGGGTCGATCCGAGCT....................................................................................................................................23100.1010100000000
.............................................................................................................................GAG----CAGCGGGTCGATCCGAGCCAT..................................................................................................................................24100.1010100000000
........................................................................................................................................GGGTCGATCCGAGCCATAGCCCA--------------------------------G...........................................................................................24110.0910100000000
...........................................................................................................................TCGAG----CAGCGGGTCGATCCGC.......................................................................................................................................21120.0810010000000
.....................................................................................................................................................................................................................TCACAGCCAATCCCACCAAC..................................................20120.0810100000000
.....................................................................................................................................................................................................................TCACAGCCAATCCCACCAACACCA----AAAC......................................28120.0810100000000
.....................................................................................................................................................................................................................TCACAGCCAATCCCACCAACACC...............................................23120.0810100000000
.....................................................................................................................................................................................................................TCACAGCCAATCCCACCAACACCA----AAA.......................................27120.0810100000000
................................................................................................................................................................................................................CACAATCACAGCCAATCCCACCAACACA...............................................28120.0810100000000
.....................................................................................................................................................................................................................TCACAGCCAATCCCACCAACACCA----AA........................................26120.0810100000000
.........................................................................................................................................................................................................................AGCCAATCCCACCAACACCA----AAACGA....................................26130.0810100000000
......................................................................................................................................................................................................................CACAGCCAATCCCACCAACACCA----AAACGA....................................29130.0810100000000
..................................................................................................................................................................................................................................CACCAACACCA----AAACGAC-----------------------------------18130.0810100000000
...................................................................................................................................................................................................................AATCACAGCCAATCCCACCAACACCG----..........................................26150.0710100000000
............................................................................................................................CGAG----CAGCGGGTCGATCC.........................................................................................................................................18160.0610100000000
droPer2
GAAGTCGGAGGAGAGCTGGCAAGCCGACGCGCAGGAGCAGAGCGCCAAAACG-GCCAACGGGCAGCCACACACACACACACACGAACGGATCGAACCCGTTGCGAGACGAACTTGGTTCGAGTTCGAG----CAACGGGTCGATCCAAGCCATAGCCCA--------------------------------GCCAGCAACTACACAACCGCAAACACAGCCAATCCCACCAACACCA----AAACGAC-----------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................CGCGCAGGAGCAGAGCGCCAAAACG-G.....................................................................................................................................................................................................................................26200.55110110000
...........................CGCGCAGGAGCAGAGCGCCAAAACG-......................................................................................................................................................................................................................................25200.357061000
.......................................................................ACACACACACACGAACGGATCGAACCC.........................................................................................................................................................................................2760.332200000
...............................................................................ACACGAACGGATCGAACCC.........................................................................................................................................................................................1970.292200000
..............................................................................CACACGAACGGATCGAACCC.........................................................................................................................................................................................2070.292200000
...........................CGCGCAGGAGCAGAGCGCCAAAAC........................................................................................................................................................................................................................................24200.255050000
.................................................................................................................................................CAAGCCATAGCCCA--------------------------------GCCAGCAACTACAC..............................................................................2850.201100000
................................................................................................................................................CCAAGCCATAGCCCA--------------------------------GCCAGCAAC...................................................................................2450.201010000
.................................................................................................................................................CAAGCCATAGCCCA--------------------------------GCCAGCAACTA.................................................................................2550.201010000
....................................................................CACACACACACACACGAACGGATC...............................................................................................................................................................................................24110.182020000
...........................CGCGCAGGAGCAGAGCGCCAAAACG-GC....................................................................................................................................................................................................................................27200.153020001
...........................CGCGCAGGAGCAGAGCGCCAAA..........................................................................................................................................................................................................................................22200.153030000
...........................................................................................................................TCGAG----CAACGGGTCGATCCAAGCCA...................................................................................................................................25200.153030000
..........................................................CGGGCAGCCACACACACACACAC..........................................................................................................................................................................................................2380.131010000
...........................CGCGCAGGAGCAGAGCGCCAAAAA........................................................................................................................................................................................................................................24200.102020000
...........................CGCGCAGGAGCAGAGCGCCAAAA.........................................................................................................................................................................................................................................23200.102020000
...........................CGCGCAGGAGCAGAGCGCCAAAAAA-......................................................................................................................................................................................................................................25200.102020000
...........................CGCGCAGGAGCAGAGCGCC.............................................................................................................................................................................................................................................19200.102020000
....................................................................CACACACACACACACGAACGGATCGA.............................................................................................................................................................................................26110.091010000
..........................................................................CACACACACGAACGGATCGAACC..........................................................................................................................................................................................23150.071010000
......................................................................CACACACACACACGAACGGATCGAAC...........................................................................................................................................................................................26160.061010000
...............................................................................................................................................TCCAAGCCATAGCCCA--------------------------------GCCAGC......................................................................................22160.061010000
............................................................................................................................................CGATCCAAGCCATAGCCCA--------------------------------GCCAGC......................................................................................25160.061010000
.......................................................................ACACACACACACGAACGGATCGA.............................................................................................................................................................................................23160.061010000
........................................................................CACACACACACGAACGGATCGAAAA..........................................................................................................................................................................................25180.061010000
............................................................................................................................................CGATCCAAGCCATAGCCCA--------------------------------GCCAG.......................................................................................24190.051010000
.............................................................................................................................................GATCCAAGCCATAGCCCA--------------------------------GCCAG.......................................................................................23190.051010000
...................CAAGCCGACGCGCAGGAGCAGAGCGCCC............................................................................................................................................................................................................................................28190.051010000
...........................CGCGCAGGAGCAGAGCGC..............................................................................................................................................................................................................................................18200.051100000
...............................................AAACG-GCCAACGGGCAGC.........................................................................................................................................................................................................................18200.051010000
......................................................................................................................................ACGGGTCGATCCAAGCCATAGCC..............................................................................................................................23200.051010000
...........................................................................................................................TCGAG----CAACGGGTCGATCCAAGC.....................................................................................................................................23200.051010000
.........................................GCGCCAAAACG-GCCAACGGGCT...........................................................................................................................................................................................................................22200.051010000
.......................................................CAACGGGCAGCCACACACACAA..............................................................................................................................................................................................................22200.051010000
.......................................................CAACGGGCAGCCACACACAA................................................................................................................................................................................................................20200.051010000
............................GCGCAGGAGCAGAGCGCCAAAAC........................................................................................................................................................................................................................................23200.051010000
.........................................................................................................................................GGTCGATCCAAGCCATAGA...............................................................................................................................19200.051010000
...................................................G-GCCAACGGGCAGCCACACACAC................................................................................................................................................................................................................23200.051010000
........................................................................................................................AGTTCGAG----CAACGGGTCGAT...........................................................................................................................................20200.051000001
...............................CAGGAGCAGAGCGCCAAAA.........................................................................................................................................................................................................................................19200.051010000
.......................CCGACGCGCAGGAGCAGAGCGCCAA...........................................................................................................................................................................................................................................25200.051010000
............................................................................................................................CGAG----CAACGGGTCGATCCAAG......................................................................................................................................21200.051000100
........................CGACGCGCAGGAGCAGAGC................................................................................................................................................................................................................................................19200.051000001
....................................................................................................................................CAACGGGTCGATCCAAGCCATAGC...............................................................................................................................24200.051010000
...........................CGCGCAGGAGCAGAGCGCCAAAACG-GT....................................................................................................................................................................................................................................27200.051010000
...........................CGCGCAGGAGCAGAGCGCCA............................................................................................................................................................................................................................................20200.051010000
...............................CAGGAGCAGAGCGCCAAAACG-GCC...................................................................................................................................................................................................................................24200.051010000
......................................................................................................................................................................................................................CACAGCCAATCCCACCAAC..................................................19200.051010000
droVir3
AAAACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
No Reads
droMoj3
AGCGCACTG---------------------------------TGCATCAAGC-AG----------------------------------------------------------GAGCTGGAGGATGAG----GAGCAGCTTGAGCAGACACA--------GCACCAGGAACTGGACCTAGATCA--------------------GCATCACGATCTCGACCAGGACCACGACAATGA----CAGCAAC-----------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................................................................................................AGCTTGAGCAGACACA--------GCACCAGGAACT...............................................................................................................2813.003300000
...................................................................................................................................................................................GATCA--------------------GCATCACGATCTCGACC..............................................................2212.002200000
......................................................................................................................................................................................................................CTCGACCAGGACCACGACAATGA----CAGCA.....................................2811.001100000
..........................................................................................................................................CTTGAGCAGACACA--------GCACCAGGAACT...............................................................................................................2611.001100000
..................................................................................................................................................................ACCAGGAACTGGACCTAGAT.....................................................................................................2011.001100000
......................................................................................................................................................CA--------GCACCAGGAACTGGACC..........................................................................................................1911.001000010
............................................................................................................................................................................GGACCTAGATCA--------------------GCATCACGATCT...................................................................2411.001100000
......................................................................................................................GGAGGATGAG----GAGCAGCTTGAGC..........................................................................................................................................2311.001000001
..................................................GC-AG----------------------------------------------------------GAGCTGGAGGATGAG----GA.....................................................................................................................................................2111.001000001
........................................................................................................................AGGATGAG----GAGCAGCTTGA............................................................................................................................................1911.001000001
.....................................................................................................................................................................AGGAACTGGACCTAGATCA--------------------GCATC..........................................................................2411.001100000
...................................................................................................................................................................................GATCA--------------------GCATCACGATCTCGACCAGGACC........................................................2811.001100000
...................................................................................................................................................................................................................GATCTCGACCAGGACCACGAC...................................................2111.001100000
............................................................................................................................................TGAGCAGACACA--------GCACCAGGAACT...............................................................................................................2411.001100000
.................................................AGC-AG----------------------------------------------------------GAGCTGGAGGATGAG----GA.....................................................................................................................................................2211.001000001
......................................................................................................................................................................................CA--------------------GCATCACGATCTCGACCAGG...........................................................2211.001100000
.................................................................................................................................................................................................................ACGATCTCGACCAGGACCACGACAAT................................................2611.001100000
...........................................................................................................................ATGAG----GAGCAGCTTGAGCAG........................................................................................................................................2011.001000001
................................................................................................................................................................................................................CACGATCTCGACCAGGAC.........................................................1811.001000010
droGri2
TGGCATTTCGTCAGGCGG-----------------AGCATGGCAAAGCGACA-ACCAACACACTCACACACA--CACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC--------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..............................................................CTCACACACA--CACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA.................................18200.05110
droAna3
GGAGAAGAG---------------------------------CCCGCCAAAA-ATAAATGCAAATACACACA--CACACACACAGCCAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................AATGCAAATACACACA--CACACACAC........................................................................................................................................................................................................25200.051100000
droBip1
GCCAC-----------------------------------------------------TATGCAGCCACGCA--CACACACACACACGCATTGCTC---------------------------------------------------------------------------------------------------------------------------------------------------------CC--------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATCGCAGGGAATCTCA----CAGGG----AAATGGT-----------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCATGCTTAGTTT----------------------------------------------------------------------------------------------------------GGGTCCGAT----CAGCGGGTTCAGCTGCGTCATGTAACA--------------------------------GCA--------------------------------------C----A----------GCC--------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCAGCAGCAGCAGCAACAGCAA----------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAGCAACATCAGCCAGCA--------------------------------------C----AG--CAGCAAC--ATGCACATGCCCTGCTCGTAGACGTGGTGAATCSizeHit CountTotal NormTotal
No Reads
droTak1
GGGGACGAGGACGGGCGGACTGGCCGACGGGCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CCCAC------------------------------------------------------GTTCAGACACACA--CACACACACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC--------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................TTCAGACACACA--CACACACA.........................................................................................................................................................................................................2050.201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTCAGACACACA--CACACACAA........................................................................................................................................................................................................2180.131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................TTCAGACACACA--CACACACACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------G..................................23130.081000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TCAGACACACA--CACACAC..........................................................................................................................................................................................................18160.061000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSec2
GCAGCTATTGCCCGGCACATGGACCGCCGGCCGT-GGCAG--CCCCAAATGGCG-CCATCGGCCATCATCCCCACATTCATGCCCATCCTCCGCACACCCATTCGCATGCCCATCCTCCCCATTCGCATCACGCACAG--------------------CAGCAACAGCAACAGCAGCAGCAGCA--------------------G---------------CAGCTTCATCATCACC-AT--CAGCAAC-----------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
................................................................................................................................................................GCAACAGCAACAGCAGCAGCAGCA--------------------...............................................................................24200.0510001
..............................................................................................................................................................CAGCAACAGCAACAGCAGCAG........................................................................................................21200.0510100
..................................................................................................................................................................AACAGCAACAGCAGCAGCAGC....................................................................................................21200.0510001
.................................................................................................................................................................CAACAGCAACAGCAGCAGC.......................................................................................................19200.0510010
droYak3
TAAGCCTGCGCAAGGCGCGCAAAAGGACACGCGCACACACAGAGCCGCACTC-ACCCACACACAGACACACA--CCCACACACACACGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
No Reads
droEre2
GCCGTAGCCA----------------------------------------------------------------------------------------------------------------------------------------------------TGACAACAGCAACACCAACGACACCA--------------------A---------CAACACCAACCA------CACC-AACA-------ACA--------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads

Generated: 10/20/2015 at 07:02 PM