ID:

dps-mir-219

 Coordinate:

XR_group6:9338113-9338212 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.3 -30.3 -30.3

Flybase annnotation

utr5 [utr5_plus_8436]; pre_miRNA [Dpse\mir-219-RM]; miRNA [Dpse\miR-219-RA]

No Repeatable elements found

Sense Strand Reads

GTAGCCAGCATCCAGATACGAGTACTCGTATCAGTATCAAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATATCCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCAGCAACCAAAATCTAATTTAAACGTACTCAATATCCAATATCCTAAAT

*****************************************************(((.(((((.((((.((((.(((((..(((((((((((...............)))))))))))..))))))))).)))).)))))..))).******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 M062

head

 SRR902012

CNS imaginal disc

 GSM444067

head

 M059

embryo

 GSM343916

embryo

 SRR902011

testis

 V112

male body		 M022

male body
....................................................................TGATTGTCCAAACGCAATTCTTG............................................................................................................. 23 0 1 894.00 894 842 22 4 13 7 4 2 0 0
....................................................................TGATTGTCCAAACGCAATTCT............................................................................................................... 21 0 1 493.00 493 314 163 0 12 2 0 2 0 0
............................................................................................................AGGGTTGTGACTGGACATCGCG...................................................................... 22 0 1 185.00 185 17 3 102 18 17 20 4 3 1
....................................................................TGATTGTCCAAACGCAATTCTT.............................................................................................................. 22 0 1 169.00 169 127 35 0 7 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTC................................................................................................................ 20 0 1 138.00 138 97 33 0 7 1 0 0 0 0
.....................................................................GATTGTCCAAACGCAATTCTTG............................................................................................................. 22 0 1 60.00 60 60 0 0 0 0 0 0 0 0
....................................................................TTATTGTCCAAACGCAATTCT............................................................................................................... 21 1 1 46.00 46 1 44 0 0 1 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCC............................................................................................................... 21 1 1 31.00 31 0 30 0 0 1 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCGC....................................................................... 21 0 1 23.00 23 0 0 12 3 4 4 0 0 0
.....................................................................GATTGTCCAAACGCAATTCT............................................................................................................... 20 0 1 18.00 18 18 0 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATT................................................................................................................. 19 0 1 16.00 16 11 5 0 0 0 0 0 0 0
....................................................................TTATTGTCCAAACGCAATTCTT.............................................................................................................. 22 1 1 14.00 14 0 14 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCTTGT............................................................................................................ 24 0 1 13.00 13 5 4 0 4 0 0 0 0 0
....................................................................TTATTGTCCAAACGCAATTC................................................................................................................ 20 1 1 12.00 12 0 12 0 0 0 0 0 0 0
....................................................................TTATTGTCCAAACGCAATTCTTG............................................................................................................. 23 1 1 10.00 10 0 5 0 0 5 0 0 0 0
....................................................................TTATTGTCCAAACGCAATTCC............................................................................................................... 21 2 1 8.00 8 0 8 0 0 0 0 0 0 0
.....................................................................GATTGTCCAAACGCAATTCTT.............................................................................................................. 21 0 1 8.00 8 8 0 0 0 0 0 0 0 0
...........................................................................................................AAGGGTTGTGACTGGACATCGC....................................................................... 22 0 1 8.00 8 0 0 3 0 2 3 0 0 0
............................................................................................................ATGGTTGTGACTGGACATCGCG...................................................................... 22 1 1 7.00 7 0 0 0 0 7 0 0 0 0
...................................................................CTGATTGTCCAAACGCAATTCT............................................................................................................... 22 1 1 6.00 6 3 3 0 0 0 0 0 0 0
.....................................................................GATTGTCCAAACGCAATTC................................................................................................................ 19 0 1 6.00 6 6 0 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTT................................................................................................................ 20 1 1 4.00 4 3 1 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCGCGT..................................................................... 23 1 1 3.00 3 0 0 0 0 1 1 0 1 0
.............................................................................................................GGGTTGTGACTGGACATCGCG...................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCTTGC............................................................................................................ 24 1 1 3.00 3 0 3 0 0 0 0 0 0 0
....................................................................TGATTGTCCACACGCAATTCT............................................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0 0 0 0
........................................................................TGTCCAAACGCAATTCTTG............................................................................................................. 19 0 1 3.00 3 2 0 0 0 0 1 0 0 0
....................................................................TGATTTTCCAAACGCAATTCTTG............................................................................................................. 23 1 1 3.00 3 2 0 0 0 0 0 0 1 0
....................................................................TGATTGTCCAAACGCAATTCTC.............................................................................................................. 22 1 1 3.00 3 0 3 0 0 0 0 0 0 0
...................................................................CTGATTGTCCAAACGCAATTCTT.............................................................................................................. 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACTCAATTCTTG............................................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.......................................................................TTGTCCAAACGCAATTCTT.............................................................................................................. 19 0 1 2.00 2 1 1 0 0 0 0 0 0 0
...................................................................CTGATTGTCCAAACGCAATTC................................................................................................................ 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0
....................................................................TGAATGTCCAAACGCAATTCT............................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCGTG...................................................................... 22 1 1 2.00 2 0 0 0 0 0 2 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCG........................................................................ 20 0 1 2.00 2 1 0 0 1 0 0 0 0 0
....................................................................TGACTGTCCAAACGCAATTCT............................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0
....................................................................TTACTGTCCAAACGCAATTCT............................................................................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0 0 0
....................................................................TGATTGTACAAACGCAATTCT............................................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCACTTCTTG............................................................................................................. 23 1 1 2.00 2 0 0 0 1 0 1 0 0 0
....................................................................TGATTGGCCAAACGCAATTCT............................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0
...................................................................CTGATTGTCCAAACGCAATTCTTG............................................................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0
....................................................................TGCTTGTCCAAACGCAATTC................................................................................................................ 20 1 1 2.00 2 0 2 0 0 0 0 0 0 0
....................................................................TGATTGTCCAGACGCAATTCTT.............................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0
............................................................................................................AGGGTTGCGACTGGGCATCGCG...................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TTATTTTCCAAACGCAATTCTT.............................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................TGGGTTGTGACTGAGCATCGC....................................................................... 21 3 1 1.00 1 0 0 0 0 0 1 0 0 0
................................................................GATCTGATTGTCCAAACGCAATTCC............................................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TTATTGTCCAAACGCAAT.................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTTTCCAAACGCAATTCT............................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................GATTGTCCAAACGCAATTCTTGT............................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TGCTTGTCCAAACGCAATTCT............................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................ATTTTCCAAACGCAATTCTTG............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCTCG...................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................TGAGTGTCCAAACGCAATTCC............................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TTATTGTCCACACGCAATTCT............................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGACTGTCCAAACGCTATTCTT.............................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATC......................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................................................................TTGTCCAAACGCAATTCTTG............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................CTGATTGTCCAAACGCAATTCC............................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCA............................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................TTGATTGTCCAAACGCAATTCT............................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGCCATCGCG...................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................TGATTGTCCAAACGCAACTCTTG............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCTCG............................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................ATGGTTGTGACTGGACATCG........................................................................ 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................TGATTGTCCAAACGCTATTCTTG............................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................CGATTGTCCAAACGCAATTCTTG............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................GGATTGTCCAAACGCAATTCTTG............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................ACTGATTGTCCAAACGCAATTCTTG............................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................AGGGATGTGACTGGACATCGCC...................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................TGATTGTCCAAGCGCAATTCT............................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TTAGTGTCCAAACGCAATTC................................................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................ATGATTGTCCAAACGCAATTCTTG............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCGCGG..................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................TGATTGTCCAAATGCAATTCTTG............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................GATTGTCCAAACGCAATTCTTT............................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACCCAATTCTT.............................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCGCC...................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................TTGATTGTCCAAACGCAATTCTT.............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................TATTGTCCAAACGCAATTCTT.............................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATCGTCCAAACGCAATTCTTG............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATGGCG...................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................TTATTGTCCAAAAGCAATTCTTG............................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCTCC............................................................................................................. 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................GAATGTCCAAACGCAATTCT............................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTTTTG............................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................................AGGTTTGTGACTGGACATCGC....................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACCTCGCG...................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
..................................................................GTTGATTGTCCAAACGCAATTCTTG............................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TTAGTGTCCAAACGCAATTCT............................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................ATGGTTGTGACTGGACATCGC....................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................ATTGTCCAAACGCAATTCT............................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGCAATTCTTGTA........................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TGCTTGTCCAAACGCAATTCTT.............................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TTATTCTCCAAACGCAATTCTT.............................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................TTGTCCAAACGCAATTCT............................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................AGGGTGGCGACTGGCCATCGCG...................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................TGATTGTCCAAACGAAATTTT............................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGACATCACG...................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................TGATTGTCCGAACGCAATTCTTG............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TGGTTGTCCAAACGCAATTCTC.............................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGAAATTCTTG............................................................................................................. 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................................AGGGTTGTGATTGGACATCGCG...................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
......................................................................ATTGTCCAAACGCAATTCTTG............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TAATTGTCCAAACGCAGTTCT............................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................................AGGGTTGGGACTGGACTTCGCC...................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................TGATTGTCCAAACGCAATTCTTGA............................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TGACTGTCCAAACGCAATTCTTG............................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................CTTGATTGTCCAAACGCAATTCT............................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................TCATTGTCCAAACGCAATTCTTGT............................................................................................................ 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................TGAATGTCCAAACGCAATTCTTG............................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACTCAATTCT............................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTTTCCAAACGCAATTCC............................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................AGGGTTGTGACTGGGCATCGCG...................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................TGATTTTCCAAACGCAATTC................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAAAGCAATTCT............................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................TTATTGTCCAAACGCAACTCC............................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................................................................................AGGGCTGTGTCTGGACATCTCG...................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0
.....................................................................TATGGTCCAAACGCAATTCTT.............................................................................................................. 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGAAATTCG............................................................................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................................TGATTGTCCAAACGATATTCT............................................................................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................................................CGGATGGTCCAAACGCAATTCT............................................................................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CATCGGTCGTAGGTCTATGCTCATGAGCATAGTCATAGTTTTATAAACCAATTAAGCTAAAAATCGATACTAACAGGTTTGCGTTAAGAACAACTATAGGTTATGAGTTCCCAACACTGACCTGTAGCGCCGAGCTTTATTCTTATGTTGGGTCGTTGGTTTTAGATTAAATTTGCATGAGTTATAGGTTATAGGATTTA

*******************************************************(((.(((((.((((.((((.(((((..(((((((((((...............)))))))))))..))))))))).)))).)))))..))).***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 GSM343916

embryo

 V112

male body
...............................................................................................................................................TATGTTTGGTCGTAGCTTTTAGATT................................ 25 3 1 1.00 1 1 0 0
....................................................................................................................................................TTGGTCGTAGCTTTTAGATTA............................... 21 3 3 0.33 1 1 0 0
........................................................................TCCGGTTTGCGTTAAGTACAA........................................................................................................... 21 3 4 0.25 1 0 1 0
..............................................AGCAATTAGGCTAAAAGTCG...................................................................................................................................... 20 3 14 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 XR_group6:9338063-9338262 - dps-mir-219 Known_mirbase GTAGC-CAG------------------CATCCAGATACGAGTACTCGTATC---AGTATCAAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCAGCAACCAAAATCTAATTTAAACGTACTCAATA------------------------------------------------TCCAATATC-CTAAAT
droPer2 scaffold_35:387420-387619 + dpe-mir-219 Known_mirbase GTAGC-CAG------------------CATCCAGATACGAGTACTCGTATC---AGTATCAAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCATCAACCAAAATCTAATTTAAGCGTACTCAATA------------------------------------------------TCCAATATC-CTAAAT
droWil2 scf2_1100000004768:2086475-2086643 + dwi-mir-219 Known_mirbase CA-----------------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATAAGAATACA-CCCAATAACCAAA-----------GTGAAAC-A---TTGTAAATATTCATTTAATTTGTAATAA--------------------------ATT-GTAAAT
droVir3 scaffold_13049:5991417-5991545 - dvi-mir-219 Known_mirbase ------------------------------------------------------AGTGTATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATGAGAATCCAACCCA-CAACCAAA---------------------------------------------------------------------------------------
droMoj3 scaffold_6680:4316890-4317044 - dmo-mir-219 Known_mirbase AAAG---------------CTTTCAAGTGTCT-------------------AAATACAAACATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTTTTAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATCCAACACAA-AGCCAAAATATA----------------------------------------------------------------------------------
droGri2 scaffold_15110:13121819-13121972 + dgr-mir-219 Known_mirbase -------------------------------------------------------------AAACATTTGGTGAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAAAACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATACAACACAAAAATCAAAACACATTTT----GTATTCAATT----------------------------------------------------ATGTCAATTTAT
droAna3 scaffold_13337:8265320-8265448 + dan-mir-219 Known_mirbase C-AGTG----------ACCT-------------------------------GAAAAACAAAATAT-TTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAAC---------------------------------------------------------------------------------------------------
droBip1 scf7180000396541:409862-410011 + C-AGTG----------ACCT-------------------------------GAAAAACAAAATATTTTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACAAAGAAAACCATTTAAACAT-------------------------------------------------------------------------------
droKik1 scf7180000302474:640177-640300 + GT------------------------------------------------------------TATACTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAT-T-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACGACTCGGCAACCAAGA--------------------------------------------------------------------------------------
droFic1 scf7180000454107:825200-825333 + TG-----------------C--------------------------------AAAATAAACAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAA----------------------------------------------------------------------------------------
droEle1 scf7180000490993:219043-219209 + G---------------------------------------------------AAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAATTCATTTATAAACTGCATTATACG-------------------CCGTAT----------------------------------TAAAT
droRho1 scf7180000780124:81249-81422 + GAAG---------------C-------------------------------GAAAATAAATATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAAATCATCAATAAAGTGCTTTATA-AATAA-----------------------------AACGA---------------TA---CTG---
droBia1 scf7180000302428:6673837-6673997 + GA---------------------------------------------------AACAAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCGTGAATCAAGTGCATTATTTATCGA-----------------------------A------------------------------
droTak1 scf7180000415815:374361-374532 - G---------------------------------------------------AGAATATATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAAATCTTAAACCCAGTGCATTATAGA-------------------TTGGAATAAATTGAAA-----------------------------
droEug1 scf7180000409711:25981-26136 - GTAG---------------C-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAGCCAAATCATCATTGAAGTGCATT---------------------------------------------------------------------
dm3 chr3L:17308066-17308235 + dme-mir-219 Known_mirbase ATAGC-TTGCGCCGCGGAGC-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTGAAGTGAACT---------------------------------------------------------------------
droSim2 3l:16883559-16883749 + dsi-mir-219 Known_mirbase GGAG---------------C-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTGAAGTGAACT-TTTATTGA-----------------------------AACGAAATCGGTTCATGTGATATC-CTG---
droSec2 scaffold_0:9359453-9359646 + dse-mir-219 Known_mirbase GGAG---------------C-------------------------------GAAAATAAATAAATATTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTGTAGTGAACT-TTTATTGA-----------------------------AACGAAATCGGTTCATGTGATATC-CTGCAG
droYak3 3L:16762547-16762717 - dya-mir-219 Known_mirbase GAAGCG----------AAGC-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTAAAGTGAACTTTTTATCGA-----------------------------A------------------------------
droEre2 scaffold_4784:16541248-16541449 - der-mir-219 Known_mirbase GC-G-------CCGCGAAGC-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTAAAGTGTACATTTTATTGA-----------------------------AACGAAATTGGTTCATACGATACT-GTTCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTAGC-CAG------------------CATCCAGATACGAGTACTCGTATC---AGTATCAAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCAGCAACCAAAATCTAATTTAAACGTACTCAATA------------------------------------------------TCCAATATC-CTAAATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231894.0089408427224130024
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................211493.00493031421630120020
...................................................................................................................................AGGGTTGTGACTGGACATCGCG.......................................................................................................................221185.001851171732018304102
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................221169.001690127035070000
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................201138.00138097133070000
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22160.006006000000000
..........................................................................................TGATTGTCCAAACGCAATTCC.................................................................................................................................................................21131.003100130000000
...................................................................................................................................AGGGTTGTGACTGGACATCGC........................................................................................................................21123.002300404300012
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................20118.001801800000000
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19116.001601105000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................24113.00130504040000
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2118.0080800000000
..................................................................................................................................AAGGGTTGTGACTGGACATCGC........................................................................................................................2218.0080020300003
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1916.0060600000000
..........................................................................................TGATTGTCCAAACGCAATTT..................................................................................................................................................................2014.0040301000000
...................................................................................................................................AGGGTTGTGACTGGACATCGCGT......................................................................................................................2313.0030010101000
....................................................................................................................................GGGTTGTGACTGGACATCGCG.......................................................................................................................2113.0030300000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGC..............................................................................................................................................................2413.0030003000000
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1913.0030200100000
..........................................................................................TGATTGTCCAAACGCAATTCTC................................................................................................................................................................2213.0030003000000
.............................................................................................TTGTCCAAACGCAATTCTT................................................................................................................................................................1912.0020101000000
...................................................................................................................................AGGGTTGTGACTGGACATCG.........................................................................................................................2012.0020100010000
...........................................................................................GATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2311.0010100000000
...................................................................................................................................AGGGTTGTGACTGGACATC..........................................................................................................................1911.0010010000000
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2011.0010100000000
..........................................................................................TGATTGTCCAAACGCAATTCA.................................................................................................................................................................2111.0010100000000
.........................................................................................ATGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2411.0010100000000
...................................................................................................................................AGGGTTGTGACTGGACATCGCGG......................................................................................................................2311.0010000000001
...........................................................................................GATTGTCCAAACGCAATTCTTT...............................................................................................................................................................2211.0010100000000
...................................................................................................................................AGGGTTGTGACTGGACATCGCC.......................................................................................................................2211.0010000010000
..........................................................................................TGATTGTCCAAACGCAATTCTCC...............................................................................................................................................................2311.0010010000000
............................................................................................ATTGTCCAAACGCAATTCT.................................................................................................................................................................1911.0010001000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGTA.............................................................................................................................................................2511.0010100000000
.............................................................................................TTGTCCAAACGCAATTCT.................................................................................................................................................................1811.0010001000000
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2111.0010100000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGA..............................................................................................................................................................2411.0010100000000
droPer2
GTAGC-CAG------------------CATCCAGATACGAGTACTCGTATC---AGTATCAAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCCATCAACCAAAATCTAATTTAAGCGTACTCAATA------------------------------------------------TCCAATATC-CTAAATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231191.001912148120200
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................21196.009606509220
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................22164.006404604140
...................................................................................................................................AGGGTTGTGACTGGACATCGCG.......................................................................................................................22163.0063162414243
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................20118.00180100260
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2419.009030150
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2219.009090000
...................................................................................................................................AGGGTTGTGACTGGACATCGC........................................................................................................................2117.007001330
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................1917.007040120
..................................................................................................................................AAGGGTTGTGACTGGACATCGC........................................................................................................................2215.005300020
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1914.004022000
...............................................................................................GTCCAAACGCAATTCTTG...............................................................................................................................................................1813.003300000
...................................................................................................................................AGGGTTGTGACTGGACATC..........................................................................................................................1912.002100100
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................2012.002020000
..........................................................................................TGATTGTCCAAACGCAATTCTTT...............................................................................................................................................................2312.002010100
...................................................................................................................................AGGGTTGTGACTGGACATCGCT.......................................................................................................................2212.002000020
.........................................................................................ATGATTGTCCAAACGCAATTCT.................................................................................................................................................................2211.001010000
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2111.001010000
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1911.001010000
..........................................................................................TGATTGTCCAAACGCAATTCTTC...............................................................................................................................................................2311.001000010
..............................................................................................................................ACTCAAGGGTTGTGACTGGA..............................................................................................................................2011.001000010
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2011.001000100
droWil2
CA-----------------------------------------------------------AAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATAAGAATACA-CCCAATAACCAAA-----------GTGAAAC-A---TTGTAAATATTCATTTAATTTGTAATAA--------------------------ATT-GTAAATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231486.004864537811448
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................211351.00351552690027
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................201263.00263169781114
...................................................................................................................................AGGGTTGCATCTGGGCATCGCG.......................................................................................................................221176.00176182211341
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................22188.00887680112
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19128.0028319006
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22125.0025025000
...................................................................................................................................AGGGTTGCATCTGGGCATCGC........................................................................................................................21121.0021101154
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................20116.0016016000
..................................................................................................................................AAGGGTTGCATCTGGGCATCGC........................................................................................................................22112.001240053
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................21110.001036001
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2417.00701015
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1915.00505000
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2014.00420002
...................................................................................................................................AGGGTTGCATCTGGGCATCG.........................................................................................................................2014.00421001
...............................................................................................GTCCAAACGCAATTCTTG...............................................................................................................................................................1814.00421001
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1914.00411002
...................................................................................................................................AGGGTTGCATCTGGGCATC..........................................................................................................................1914.00400004
..........................................................................................TGATTGTCCAAACGCAATTCC.................................................................................................................................................................2112.00220000
............................................................................................ATTGTCCAAACGCAATTCT.................................................................................................................................................................1911.00101000
..........................................................................................TGATTGTCCAAACGCAATTT..................................................................................................................................................................2011.00100001
..........................................................................................TGATTGTCCAAACGCAAT....................................................................................................................................................................1811.00110000
..........................................................................................TGATTGTCCAAACGCAATTCG.................................................................................................................................................................2111.00100001
...................................................................................................................................AGGGTTGCATCTGGGCATCGCT.......................................................................................................................2211.00110000
...........................................................................................GATTGTCCAAACGCAATTCTC................................................................................................................................................................2111.00101000
.........................................................................................ATGATTGTCCAAACGCAATTCT.................................................................................................................................................................2211.00101000
...........................................................................................GATTGTCCAAACGCAATT...................................................................................................................................................................1811.00101000
....................................................................................................................................GGGTTGCATCTGGGCATCGCG.......................................................................................................................2111.00100010
..........................................................................................TGATTGTCCAAACGCAATTCTTGG..............................................................................................................................................................2411.00101000
............................................................................................ATTGTCCAAACGCAATTCTT................................................................................................................................................................2011.00101000
..........................................................................................TGATTGTCCAAACGCAATTCA.................................................................................................................................................................2111.00100001
..........................................................................................TGATTGTCCAAACGCAATTA..................................................................................................................................................................2011.00100001
...................................................................................................................................AGGGTTGCATCTGGGCATCGCGT......................................................................................................................2311.00100010
.....................................................................................................................................GGTTGCATCTGGGCATCGCG.......................................................................................................................2011.00101000
.........................................................................................ATGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2411.00101000
droVir3
------------------------------------------------------AGTGTATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATGAGAATCCAACCCA-CAACCAAA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2311947.00194706841800000000002671195615955660142187010002247000011000000000000000000010313100001004000000000
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................2111553.001553114393200000000002621138315989600202152000000000000000000000000000000000011017000000003000001000
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................221857.00857021671000000000016472416658440117109000001102000000000000000000000000000012000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................201216.00216450821000000000018126426091100000000000000000000000000000000000004000000007000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCG.......................................................................................................................221126.00126251190000000000111147211880000000000000000000000000000000000121720500000000000010000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................24187.00870020000000000022103966091600000000000000000000000000000000000004000000000000000000
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22161.006101590000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19143.004301170000000000056031102100000000000000000000000000000000000006000000000000000000
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................20120.002000200000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................21117.001700160000000000000001000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTT...............................................................................................................................................................23116.00160020000000000040002105200000000000000000000000000000000000000000000000000000000
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1917.0070021000000000021010000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGTCCAAACGCAATTCTT................................................................................................................................................................1816.0060010000000000001120000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATC..........................................................................................................................1916.0060600000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1914.0040130000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AAGGGTTGCGACTGGGCATCGC........................................................................................................................2213.0031001000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................ATTGTCCAAACGCAATTCT.................................................................................................................................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGA..............................................................................................................................................................2413.0030000000000000020000001000000000000000000000000000000000000000000000000000000000
.........................................................................................ATGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2413.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCG.................................................................................................................................................................2112.0020000000000000001000000000000000000000000000000000000000000001000000000000000000
.............................................................................................TTGTCCAAACGCAATTCT.................................................................................................................................................................1812.0020000000000000010001000000000000000000000000000000000000000000000000000000000000
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGG......................................................................................................................2312.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ATTGTCCAAACGCAATTCTT................................................................................................................................................................2012.0020010000000000000100000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGC..............................................................................................................................................................2411.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTC................................................................................................................................................................2211.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGTT.............................................................................................................................................................2511.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCC.......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTA................................................................................................................................................................2211.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGA......................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GTCCAAACGCAATTCTTG...............................................................................................................................................................1811.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGG..............................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCC.................................................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTG................................................................................................................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TT-CAAATACTCAAGGGTT.......................................................................................................................................1811.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTA...............................................................................................................................................................2311.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAAT....................................................................................................................................................................1811.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATA...................................................................................................................................................................1911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCG.........................................................................................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................GATTGTCCAAACGCAATTCTG................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCA.................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ATGATTGTCCAAACGCAATT...................................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGTCCAAACGCAATTCTTC...............................................................................................................................................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTTA..............................................................................................................................................................2411.0010000000000000000100000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGAAA............................................................................................................................................................2611.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2011.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGC......................................................................................................................2311.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGTTC............................................................................................................................................................2611.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................AAGGGTTGCGACTGGGCATC..........................................................................................................................2011.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................ATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2211.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.........................................................................................ATGATTGTCCAAACGCAATTCTT................................................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
AAAG---------------CTTTCAAGTGTCT-------------------AAATACAAACATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTTTTAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATCCAACACAA-AGCCAAAATATA----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231999.0099993402628110
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................211488.004884351192751
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................221193.00193176041030
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................201110.001109707510
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22168.00686800000
...................................................................................................................................AGGGTTGCATCTGGGCATCGCG.......................................................................................................................22162.00629967301
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19122.00221802200
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................20120.00202000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................24112.0012312420
...................................................................................................................................AGGGTTGCATCTGGGCATCGC........................................................................................................................2118.008013040
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2118.008800000
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2117.007700000
..........................................................................................TGATTGTCCAAACGCAATTCC.................................................................................................................................................................2115.005000050
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2014.004400000
..........................................................................................TGATTGTCCAAACGCAATTCTTGC..............................................................................................................................................................2413.003100020
..........................................................................................TGATTGTCCAAACGCAATTCTTT...............................................................................................................................................................2313.003200100
............................................................................................ATTGTCCAAACGCAATTCTT................................................................................................................................................................2013.003300000
.........................................................................................ATGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2413.003300000
..........................................................................................TGATTGTCCAAACGCAATTT..................................................................................................................................................................2012.002200000
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1912.002200000
..........................................................................................TGATTGTCCAAACGCAATTCTG................................................................................................................................................................2212.002200000
...................................................................................................................................AGGGTTGCATCTGGGCATCGCGT......................................................................................................................2311.001000010
............................................................................................ATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2211.001100000
................................................................................................TCCAAACGCAATTCTTGT..............................................................................................................................................................1811.001000100
.........................................................................................ATGATTGTCCAAACGCAATTCTT................................................................................................................................................................2311.001100000
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1911.001100000
...................................................................................................................................AGGGTTGCATCTGGGCATCGCGC......................................................................................................................2311.001000010
...................................................................................................................................AGGGTTGCATCTGGGCATCG.........................................................................................................................2011.001000100
...........................................................................................GATTGTCCAAACGCAATTCTTGG..............................................................................................................................................................2311.001100000
...........................................................................................GATTGTCCAAACGCAATT...................................................................................................................................................................1811.001100000
...............................................................................................GTCCAAACGCAATTCTTG...............................................................................................................................................................1811.001100000
..........................................................................................TGATTGTCCAAACGCAATTCTTGGCA............................................................................................................................................................2611.001100000
..........................................................................................TGATTGTCCAAACGCAATTCTTGGG.............................................................................................................................................................2511.001100000
droGri2
-------------------------------------------------------------AAACATTTGGTGAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATTT-CAAAAACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATACAACACAAAAATCAAAACACATTTT----GTATTCAATT----------------------------------------------------ATGTCAATTTATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................23193.0093930
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................21140.0040400
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22110.0010100
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................2217.00770
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................2016.00660
...................................................................................................................................AGGGTTGCATCTGGGCATCGCG.......................................................................................................................2213.00303
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................1912.00220
...........................................................................................GATTGTCCAAACGCAATTCTA................................................................................................................................................................2111.00110
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1911.00110
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2111.00110
..........................................................................................TGATTGTCCAAACGCAATTCTTGG..............................................................................................................................................................2411.00110
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................2011.00110
droAna3
C-AGTG----------ACCT-------------------------------GAAAAACAAAATAT-TTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAAC---------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231162.001621172015226
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................211114.00114674013129
...................................................................................................................................AGGGTTGCGACTGGGCATCGCG.......................................................................................................................22186.008681016259
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................20154.00543140739
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................22141.004123104112
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19112.0012200118
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................24111.0011100406
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2216.006600000
...................................................................................................................................AGGGTTGCGACTGGGCATCGC........................................................................................................................2116.006210003
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................2014.004400000
..................................................................................................................................AAGGGTTGCGACTGGGCATCGC........................................................................................................................2214.004010003
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1914.004300001
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2113.003300000
...................................................................................................................................AGGGTTGCGACTGGGCATCG.........................................................................................................................2012.002200000
..........................................................................................TGATTGTCCAAACGCAATTT..................................................................................................................................................................2012.002100001
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2112.002200000
..........................................................................................TGATTGTCCAAACGCAATTCTTGA..............................................................................................................................................................2411.001100000
...................................................................................................................................AGGGTTGCGACTGGGCATC..........................................................................................................................1911.001010000
..........................................................................................TGATTGTCCAAACGCAATTCTC................................................................................................................................................................2211.001010000
..........................................................................................TGATTGTCCAAACGCAATTCTTTG..............................................................................................................................................................2411.001100000
..........................................................................................TGATTGTCCAAACGCAATTCTG................................................................................................................................................................2211.001100000
....................................................................................................................................GGGTTGCGACTGGGCATCGCG.......................................................................................................................2111.001100000
..........................................................................................TGATTGTCCAAACGCAATTCTTGG..............................................................................................................................................................2411.001100000
droBip1
C-AGTG----------ACCT-------------------------------GAAAAACAAAATATTTTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAATT-CAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACAAAGAAAACCATTTAAACAT-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GT------------------------------------------------------------TATACTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGAT-T-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACGACTCGGCAACCAAGA--------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TG-----------------C--------------------------------AAAATAAACAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-CCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAA----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
G---------------------------------------------------AAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAATTCATTTATAAACTGCATTATACG-------------------CCGTAT----------------------------------TAAATSizeHit CountTotal NormTotal
No Reads
droRho1
GAAG---------------C-------------------------------GAAAATAAATATATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAGCAACCAAATCATCAATAAAGTGCTTTATA-AATAA-----------------------------AACGA---------------TA---CTG---SizeHit CountTotal NormTotal
No Reads
droBia1
GA---------------------------------------------------AACAAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCGTGAATCAAGTGCATTATTTATCGA-----------------------------A------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
G---------------------------------------------------AGAATATATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCAACAACCAAATCTTAAACCCAGTGCATTATAGA-------------------TTGGAATAAATTGAAA-----------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTAG---------------C-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAGCCAAATCATCATTGAAGTGCATT---------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATAGC-TTGCGCCGCGGAGC-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTGAAGTGAACT---------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................21126557.0026557000012660012241020019000100002283896411945500000000000000000000003000000000000000000023343539017700027133846281307641497414929873840190231816101481129366842214020918069947486538000000000000000000000000000000000000196822460116723563129940101631246133123500000017930000000000000000000000000000000000100070000000010016000010160500000500000000000000000000000000008101130001000000010110000000000000000012301000000062
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................23119837.00198370000230010102004103900001000301131552341245027270000000000100000000000310000000000000000000000462702517200046109311154827146196727001016196180240133111160461568138959339248000000000000000000001000000000000000110010890712783653826961672460123441588701630000013890000000000000000000000000000031000000040000000014150120000380500000310000000000000000000000000000118020101000000030341000000000000000114210110000024
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................2218633.00863300003310101001010002000000004143550862922000000000000000000000012100000000000000000010099100200000216711335914531026975100090711411202250104802011111224681861670000000000000000000000000000000000007926360594241896903554815303247710000005290000000000000000000000000000000000000020000000000002000012010000060000000000000000000000000000333150030010000200000000000000000000200000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCG.......................................................................................................................2211753.001753000000010300000000000000000100000000000000001000000000000000000000000000000000000110011000020243012147180000000011000019413041406036000000000013300000000000000000000000201401201322111702602840000011500000000010000000000000000000000000001200000000286101350000913060000012000000000000000030000010000086874671133622410020000331434200001000000000001129120191516000000
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................201872.00872000021000000001001000000000075104911200000000000000000000000000000000000000000000101300020000006001832000111710000000000000510001300248111200000000000000000000000000000000000022380102041076110821030400000350000000000000000000000000000001000000000000000001000000041200000000000000000000000000000000000021140000010000000000000000000000000400000000000
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................191587.0058700000000000000000000000000011462523120000000000000000000000100000000000000000000000110000000007001001000041000001000100001210001000201114110000000000000000000000000000000000003050017111725726175526280000047000000000000000000000000000000000000000000000000000100001203000003000000000000000000000000000010020000010000000000000000000000000200000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................241325.00325000011000100000000000000000010413512000000000000000000000010000000000000000000000000000000000200200000020000000010000010000100010081300000000000000000000000000000000000026200170053804231301600000015000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000021010010000000000000000000000000000000000000000
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................221283.0028300000000000000000000000000001226280000000000000000000000000000000000000000000000001000000000000030000009000000000000000000000006155000000000000000000000000000000000000232107305342292712530000033000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................201142.001420000000000000000000000000000008140100000000000000000000000000000000000000000000000000000000000010000002000000000000004000000003112000000000000000000000000000000000000161403004160801301900000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTT...............................................................................................................................................................231111.00111000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010030000001000000000000101000000003121321000000000000000000000000000000000000870300140601000000004000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCG.................................................................................................................................................................21184.008400001000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000100200000000000000000000000000000000000002020002000280401000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................21169.0069000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002011000000000000000000000000000000000000143013001130206060000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGT......................................................................................................................23153.0053000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000003000000000000001000001000000000000000000000000000000000000000000100000010000053000000000000000000000000000000000000000000000000000000200000001000000000000000000000000000000000000044450210000000001100000000000000001911000000000
..........................................................................................TGATTGTCCAAACGCAAT....................................................................................................................................................................18144.0044000000000000000000000000000160204100000000000000000000000000000000000000000000000000000000010021000004000000100000000000000000100000000000000000000000000000000000000000021000280020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000120000000000000000000000000000000100000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGA..............................................................................................................................................................24143.00430000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000050000000000000010000000010010000000000000000000000000000000000002603000004040200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011
..........................................................................................TGATTGTCCAAACGCAATTCA.................................................................................................................................................................21141.00410000200000000000000000000000000000000000000000000000000000000000000000000000000050000000000120000000001000400000000001000000000000000000000000000000000000000000000000230200100001060000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCC.................................................................................................................................................................21141.0041000030000002000000000000000000000000000000000000000000000000000000000000000000000000000010040020000007000000000000001000000001000000000000000000000000000000000000000210200210201050000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................21132.0032000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000000000000000000000230211051305110000002000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTA...............................................................................................................................................................23132.0032000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000010010000001000000000000000000000000020000000000000000000000000000000000000110200141401140000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTC................................................................................................................................................................22130.00300000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000003003001002000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015
...................................................................................................................................AGGGTTGCGACTGGGCATCGC........................................................................................................................21127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100110000000000000000010003000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001200000000001000001000000000000000000100000000000100300000000000100000000000000000521000000000
..................................................................................................................................AAGGGTTGCGACTGGGCATCGC........................................................................................................................22127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000100000000000000001100000000000000000000000000000000000000000000020100511000000101000000000000000000900000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGATC....................................................................................................................25124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................20123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000003000000000000001000000000000000000000000000000000000000000000000030000050302010000002000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTC...............................................................................................................................................................23118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000400400210001001000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ATGATTGTCCAAACGCAATTCT.................................................................................................................................................................22116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000020100018000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................19115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010040000000000000000000000000000001002000000000000000000000000000000000000000000010102020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTG................................................................................................................................................................22114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000200000000000000000000000000000000000000000000000000110000000105020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATTGTCCAAACGCAATTT..................................................................................................................................................................20114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000002001000000000000000000000000000000000000110100030200010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGAG---------------C-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTGAAGTGAACT-TTTATTGA-----------------------------AACGAAATCGGTTCATGTGATATC-CTG---SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................2112637.0026372991204394217901200007000
..........................................................................................TGATTGTCCAAACGCAAT....................................................................................................................................................................1811679.0016798000127154400000000000
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................2011631.0016311010293113554300000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231733.00733120417755845401000211000
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................221336.003362300212227000000000000
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................191104.001042200057700000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCG.......................................................................................................................22179.007923025000010002811000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................24141.00410000113000000000000
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................20119.0019171100000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGC........................................................................................................................21115.001590500000000100000
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22115.001500025800000000000
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................20114.0014000001400000000000
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................21113.0013111010000000000000
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1918.00830000500000000000
...................................................................................................................................AGGGTTGCGACTGGGCATC..........................................................................................................................1917.00750200000000000000
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1917.00700000700000000000
...............................................................................................GTCCAAACGCAATTCTTG...............................................................................................................................................................1816.00650100000000000000
..............................................................................................TGTCCAAACGCAATTCTT................................................................................................................................................................1816.00600000600000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGA......................................................................................................................2315.00550000000000000000
..................................................................................................................................AAGGGTTGCGACTGGGCATCGC........................................................................................................................2214.00430100000000000000
.........................................................................................ATGATTGTCCAAACGCAAT....................................................................................................................................................................1914.00400000400000000000
.............................................................................................TTGTCCAAACGCAATTCTT................................................................................................................................................................1912.00200002000000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGTT.............................................................................................................................................................2512.00200000200000000000
............................................................................................ATTGTCCAAACGCAATTC..................................................................................................................................................................1812.00210000100000000000
..........................................................................................TGATTGTCCAAACGCA......................................................................................................................................................................1612.00200000000020000000
..........................................................................................TGATTGTCCAAACGCAATTCC.................................................................................................................................................................2112.00220000000000000000
..........................................................................................TGATTGTCCAAACGCAATTCG.................................................................................................................................................................2112.00220000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCG.........................................................................................................................2012.00220000000000000000
............................................................................................ATTGTCCAAACGCAATTCT.................................................................................................................................................................1911.00110000000000000000
...........................................................................................GATTGTCCAAACGCAATT...................................................................................................................................................................1811.00100000100000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGC..............................................................................................................................................................2411.00100010000000000000
..........................................................................................TGATTGTCCAAACGCAATTT..................................................................................................................................................................2011.00110000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGC......................................................................................................................2311.00110000000000000000
...........................................................................................GATTGTCCAAACGCA......................................................................................................................................................................1511.00100000001000000000
..........................................................................................TGATTGTCCAAACGCAATTCTG................................................................................................................................................................2211.00100010000000000000
..............................................................................................TGTCCAAACGCAATTCTTGT..............................................................................................................................................................2011.00100000100000000000
..........................................................................................TGATTGTCCAAACGCAATTTG.................................................................................................................................................................2111.00100010000000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGT......................................................................................................................2311.00100000000000100000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGG......................................................................................................................2311.00110000000000000000
...................................................................................................................................AGGGTTGCGACTGGGCAT...........................................................................................................................1811.00100000100000000000
..........................................................................................TGATTGTCCAAACGC.......................................................................................................................................................................1511.00100000000001000000
........................................................................................TATGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2511.00100010000000000000
..................................................................TTTGGTTAATTCGAT...............................................................................................................................................................................................1520.50100000000010000000
droSec2
GGAG---------------C-------------------------------GAAAATAAATAAATATTTGGTTAATTCAATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTGTAGTGAACT-TTTATTGA-----------------------------AACGAAATCGGTTCATGTGATATC-CTGCAGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................211353.003533223028
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231298.002982710423
...................................................................................................................................AGGGTTGCGACTGGGCATCGCG.......................................................................................................................221135.001355157243
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................221121.001211063012
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................20130.003026004
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22114.001414000
..................................................................................................................................AAGGGTTGCGACTGGGCATCGC........................................................................................................................22114.001400122
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19113.001330010
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................2017.0077000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGT......................................................................................................................2316.0060051
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGA......................................................................................................................2313.0030012
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2013.0030003
...................................................................................................................................AGGGTTGCGACTGGGCATCGC........................................................................................................................2113.0030012
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2112.0022000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2412.0020002
.............................................................................................TTGTCCAAACGCAATTCTTGA..............................................................................................................................................................2111.0010001
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1911.0010001
..........................................................................................TGATTGTCCAAACGCAATTCTA................................................................................................................................................................2211.0011000
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2111.0011000
.............................................................................................TTGTCCAAACGCAATTCT.................................................................................................................................................................1811.0011000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCT.......................................................................................................................2211.0010001
............................................................................................ATTGTCCAAACGCAATTCT.................................................................................................................................................................1911.0010001
.....................................................................................................................................GGTTGCGACTGGGCATCGCG.......................................................................................................................2011.0010001
..........................................................................................TGATTGTCCAAACGCAATTCG.................................................................................................................................................................2111.0011000
............................................................................................ATTGTCCAAACGCAATTCTTT...............................................................................................................................................................2111.0011000
............................................................................................ATTGTCCAAACGCAATTC..................................................................................................................................................................1811.0011000
droYak3
GAAGCG----------AAGC-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTAAAGTGAACTTTTTATCGA-----------------------------A------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................231987.009871192521271650000
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................211240.0024015204607800000
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................221162.001621149404400000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCG.......................................................................................................................221153.0015314124821163650010
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................20179.00792250002320000
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22158.0058058000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGC........................................................................................................................21119.0019601120000000
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19113.001309100200010
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................20110.0010010000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2419.00903001410000
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2119.00909000000000
..................................................................................................................................AAGGGTTGCGACTGGGCATCGC........................................................................................................................2218.00830320000000
..............................................................................................TGTCCAAACGCAATTCTTG...............................................................................................................................................................1916.00606000000000
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2115.00505000000000
...................................................................................................................................AGGGTTGCGACTGGGCATC..........................................................................................................................1915.00550000000000
..........................................................................................TGATTGTCCAAACGCAATTCC.................................................................................................................................................................2114.00420200000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGT......................................................................................................................2313.00300110100000
...................................................................................................................................AGGGTTGCGACTGGGCATCG.........................................................................................................................2013.00310200000000
.........................................................................................ATGATTGTCCAAACGCAATTCT.................................................................................................................................................................2213.00303000000000
...............................................................................................GTCCAAACGCAATTCTTG...............................................................................................................................................................1812.00211000000000
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2011.00101000000000
...........................................................................................GATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2311.00100010000000
..........................................................................................TGATTGTCCAAACGCAATTT..................................................................................................................................................................2011.00100001000000
..........................................................................................TGATTGTCCAAACGCAAA....................................................................................................................................................................1811.00110000000000
.........................................................................................ATGATTGTCCAAACGCAATTCTT................................................................................................................................................................2311.00101000000000
......................................................................................................................................GTTGCGACTGGGCATCGCG.......................................................................................................................1911.00110000000000
..........................................................................................TGATTGTCCAAACGCAATTCTC................................................................................................................................................................2211.00101000000000
..........................................................................................TGATTGTCCAAACGCAATTCTGC...............................................................................................................................................................2311.00101000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGA..............................................................................................................................................................2411.00101000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGT........................................................................................................................2111.00100100000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGC..............................................................................................................................................................2411.00101000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGA......................................................................................................................2311.00110000000000
..........................................................................................TGATTGTCCAAACGCAATTCTTT...............................................................................................................................................................2311.00101000000000
.........................................................................................ATGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2411.00101000000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGTT.....................................................................................................................2411.00110000000000
...................................................................................................................................AGGGTTGCGACTGGGCAC...........................................................................................................................1811.00100100000000
..........................................................................................TGATTGTCCAAACGCAAAA...................................................................................................................................................................1940.25101000000000
droEre2
GC-G-------CCGCGAAGC-------------------------------GAAAATAAATAAATATTTGGTTAATTCGATTTTTAGCTATGATTGTCCAAACGCAATTCTTGTTGATAT-TCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTCGGCAACCAAATCACCACTAAAGTGTACATTTTATTGA-----------------------------AACGAAATTGGTTCATACGATACT-GTTCAGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................TGATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2311017.00101794471410510
..........................................................................................TGATTGTCCAAACGCAATTCT.................................................................................................................................................................211333.00333252513003924
...................................................................................................................................AGGGTTGCGACTGGGCATCGCG.......................................................................................................................221199.00199802211131450
..........................................................................................TGATTGTCCAAACGCAATTCTT................................................................................................................................................................221155.001551281200240
...........................................................................................GATTGTCCAAACGCAATTCTTG...............................................................................................................................................................22144.004444000000
..........................................................................................TGATTGTCCAAACGCAATTC..................................................................................................................................................................20141.004130210080
..........................................................................................TGATTGTCCAAACGCAATT...................................................................................................................................................................19112.00128000040
...........................................................................................GATTGTCCAAACGCAATTCT.................................................................................................................................................................20110.001010000000
...........................................................................................GATTGTCCAAACGCAATTCTT................................................................................................................................................................2119.0099000000
..................................................................................................................................AAGGGTTGCGACTGGGCATCGC........................................................................................................................2219.0090001260
.............................................................................................TTGTCCAAACGCAATTCTTG...............................................................................................................................................................2018.0082000060
...................................................................................................................................AGGGTTGCGACTGGGCATCGC........................................................................................................................2117.0070310030
............................................................................................ATTGTCCAAACGCAATTCTTG...............................................................................................................................................................2117.0077000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2415.0051020020
...................................................................................................................................AGGGTTGCGACTGGGCATCGCGT......................................................................................................................2314.0040001120
..........................................................................................TGATTGTCCAAACGCAATTCTTGA..............................................................................................................................................................2413.0033000000
............................................................................................ATTGTCCAAACGCAATTCTTGT..............................................................................................................................................................2213.0031000020
..........................................................................................TGATTGTCCAAACGCAATTCTTA...............................................................................................................................................................2313.0032000010
..........................................................................................TGATTGTCCAAACGCAATTCTTT...............................................................................................................................................................2312.0021000010
...........................................................................................GATTGTCCAAACGCAATTC..................................................................................................................................................................1911.0011000000
..........................................................................................TGATTGTCCAAACGCAATTCTG................................................................................................................................................................2211.0011000000
..........................................................................................TGATTGTCCAAACGCAATTCG.................................................................................................................................................................2111.0011000000
...................................................................................................................................AGGGTTGCGACTGGGCATCGCT.......................................................................................................................2211.0010000010
..........................................................................................TGATTGTCCAAACGCAATTCTTGAA.............................................................................................................................................................2511.0011000000
.........................................................................................ATGATTGTCCAAACGCAATTCT.................................................................................................................................................................2211.0011000000
..........................................................................................TGATTGTCCAAACGCAATTCA.................................................................................................................................................................2111.0011000000
..........................................................................................TGATTGTCCAAACGCAATTCTA................................................................................................................................................................2211.0011000000
..........................................................................................TGATTGTCCAAACGCAATTCTTGG..............................................................................................................................................................2411.0011000000
...................................................................................................................................AGGGTTGCGACTGGGCATCG.........................................................................................................................2011.0010000010

Generated: 10/20/2015 at 07:11 PM