ID:

dps-mir-124

 Coordinate:

4_group3:10867628-10867725 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.6 -30.5 -30.5

Flybase annnotation

utr5 [utr5_plus_2319]; pre_miRNA [Dpse\mir-124-RM]; miRNA [Dpse\miR-124-RA]

No Repeatable elements found

Sense Strand Reads

TATTCCCGTGGTCCCGCCTTGTATGGGGGATCCATTTTTCTCAGTGCTCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTATCAAAAACAGCAAACGACGCCAAAAGTGTTTAAGAAAATGTGAATAAAAG

********************************************************....(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM444067

head

 M062

head

 GSM343916

embryo

 M059

embryo

 M040

female body

 V112

male body		 SRR902012

CNS imaginal disc

 M022

male body		 SRR902010

ovaries
..........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................................... 21 0 1 49140.00 49140 34432 5099 3038 2118 3959 458 33 3 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................................... 23 0 1 20538.00 20538 5557 2465 4518 4578 3094 126 199 0 1
..........................................................................................................TAAGGCACGCGGTGAATGCC........................................................................ 20 0 1 13545.00 13545 5470 6338 207 616 697 215 1 1 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................................... 22 0 1 7820.00 7820 3599 378 2270 1172 331 19 51 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................................... 24 1 1 1723.00 1723 440 726 72 349 110 21 5 0 0
.......................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................................... 24 0 1 1271.00 1271 120 42 346 281 127 20 334 1 0
..........................................................................................................TAAGGCACGCGGTGAATGC......................................................................... 19 0 1 933.00 933 252 461 4 40 132 34 10 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................................... 21 1 1 619.00 619 354 193 12 2 51 5 0 2 0
........................................................................GGTATCCACTGTAGGCCTATATG....................................................................................................... 23 0 1 610.00 610 14 6 194 198 16 0 179 1 2
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................................... 24 0 1 593.00 593 171 252 24 87 52 4 3 0 0
...........................................................................................................AAGGCACGCGGTGAATGCCA....................................................................... 20 0 1 502.00 502 113 37 5 2 344 1 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGCCAAG..................................................................... 22 0 1 421.00 421 51 22 45 16 283 2 2 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................................... 21 1 1 295.00 295 224 45 23 1 2 0 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGCC........................................................................ 20 1 1 285.00 285 4 259 1 21 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................................... 21 1 1 232.00 232 173 9 44 5 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................................... 21 1 1 222.00 222 177 19 15 7 4 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 215.00 215 4 92 2 113 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGC.................................................................... 24 1 1 210.00 210 13 119 12 62 4 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................................... 22 1 1 197.00 197 42 117 3 13 22 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCACG..................................................................... 23 1 1 186.00 186 96 11 64 15 0 0 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 185.00 185 29 104 0 48 3 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................................... 23 1 1 178.00 178 43 23 30 58 18 2 4 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCA....................................................................... 21 1 1 175.00 175 10 115 0 49 0 1 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCC........................................................................ 21 1 1 156.00 156 3 146 1 5 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCCAG..................................................................... 23 1 1 153.00 153 40 0 112 1 0 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCAAG..................................................................... 24 1 1 121.00 121 8 48 10 47 8 0 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGCC........................................................................ 19 0 1 120.00 120 15 40 0 2 63 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................................... 21 1 1 112.00 112 98 2 6 2 3 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGAC........................................................................ 20 1 1 112.00 112 15 81 3 12 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAC..................................................................... 23 1 1 111.00 111 14 23 6 68 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................................... 21 1 1 110.00 110 79 9 15 6 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................................... 21 1 1 108.00 108 90 6 7 2 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................................... 22 1 1 96.00 96 28 0 68 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................................... 21 1 1 96.00 96 73 13 3 6 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................................... 22 1 1 94.00 94 37 15 5 33 4 0 0 0 0
..........................................................................................................TACGGCACGCGGTGAATGCCA....................................................................... 21 1 1 88.00 88 71 10 2 4 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................................... 23 1 1 87.00 87 28 26 6 23 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCAAG..................................................................... 23 1 1 86.00 86 40 8 24 11 2 1 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 85.00 85 3 29 1 51 1 0 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 85.00 85 42 25 6 10 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGACA....................................................................... 21 1 1 84.00 84 77 1 5 0 1 0 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................................... 21 1 1 82.00 82 71 1 7 0 3 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................................... 21 1 1 78.00 78 67 1 9 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................................... 22 1 1 78.00 78 35 23 7 1 11 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCAAG..................................................................... 23 1 1 75.00 75 24 3 40 8 0 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCC........................................................................ 20 1 1 73.00 73 3 59 0 10 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................................... 21 1 1 73.00 73 57 0 15 0 1 0 0 0 0
.......................................................................TTGTATCCACTGTAGGCCTATATG....................................................................................................... 24 1 1 71.00 71 0 10 1 60 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATG.......................................................................... 18 0 1 69.00 69 38 4 3 3 13 2 6 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................................... 21 1 1 67.00 67 61 0 6 0 0 0 0 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 62.00 62 32 15 2 13 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................................... 21 1 1 61.00 61 50 5 2 2 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................................... 21 1 1 60.00 60 45 9 5 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................................... 21 1 1 59.00 59 51 2 1 2 2 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................................... 21 1 1 57.00 57 39 5 11 1 0 1 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGCCAA...................................................................... 21 0 1 56.00 56 13 4 5 3 29 1 1 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................................... 21 1 1 56.00 56 49 4 1 0 1 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................................... 21 1 1 55.00 55 40 2 11 2 0 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................................... 21 1 1 54.00 54 20 17 10 7 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATACCA....................................................................... 21 1 1 54.00 54 42 4 4 3 1 0 0 0 0
........................................................................GTTATCCACTGTAGGCCTATATG....................................................................................................... 23 1 1 53.00 53 0 0 0 52 1 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTATAT........................................................................................................ 23 0 1 51.00 51 7 1 18 1 3 1 20 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCA....................................................................... 21 1 1 50.00 50 47 0 2 0 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCAAG..................................................................... 23 1 1 50.00 50 22 1 20 2 4 0 1 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCC........................................................................ 20 1 1 50.00 50 26 20 1 2 0 1 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTATA......................................................................................................... 22 0 1 50.00 50 1 1 26 10 4 0 8 0 0
..........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................................... 21 1 1 49.00 49 39 4 3 2 1 0 0 0 0
..........................................................................................................TTAGGCACGCGGTGAATGCC........................................................................ 20 1 1 48.00 48 0 45 0 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCAA...................................................................... 22 1 1 48.00 48 31 1 13 1 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................................... 21 1 1 48.00 48 43 0 2 0 3 0 0 0 0
..........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................................... 21 1 1 47.00 47 32 3 6 3 3 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCCA....................................................................... 21 1 1 46.00 46 33 7 3 0 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCAA...................................................................... 22 1 1 44.00 44 16 1 24 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................................... 21 1 1 43.00 43 36 3 2 2 0 0 0 0 0
..........................................................................................................TTAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 43.00 43 1 30 2 10 0 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCAAGT.................................................................... 24 2 1 43.00 43 0 34 0 8 1 0 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 42.00 42 5 12 8 15 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCATT..................................................................... 23 2 1 41.00 41 17 16 0 1 7 0 0 0 0
..........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................................... 21 1 1 41.00 41 22 7 5 5 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCCAAG..................................................................... 23 1 1 39.00 39 7 2 24 6 0 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCAA...................................................................... 22 1 1 38.00 38 0 12 2 23 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCT........................................................................ 20 1 1 38.00 38 12 22 1 1 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCC........................................................................ 20 1 1 37.00 37 22 12 3 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAAGCCA....................................................................... 21 1 1 37.00 37 35 1 1 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCGAG..................................................................... 23 1 1 37.00 37 15 1 18 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................................... 21 1 1 36.00 36 32 1 1 0 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAGG..................................................................... 23 1 1 36.00 36 15 0 10 5 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGACAAG..................................................................... 23 1 1 35.00 35 11 0 24 0 0 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTA........................................................................................................... 20 0 1 35.00 35 24 1 1 0 6 0 3 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 34.00 34 20 6 0 7 1 0 0 0 0
..........................................................................................................TTAGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 34.00 34 1 10 0 23 0 0 0 0 0
..........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................................... 21 1 1 34.00 34 28 1 3 1 0 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGATTGCCA....................................................................... 21 1 1 34.00 34 11 17 1 5 0 0 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGCCAAGT.................................................................... 23 1 1 34.00 34 2 16 1 3 12 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCTAAG..................................................................... 23 1 1 34.00 34 12 8 9 4 1 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGCCAAG..................................................................... 23 1 1 33.00 33 3 11 7 12 0 0 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................................... 21 1 1 33.00 33 31 0 2 0 0 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCA....................................................................... 19 0 1 33.00 33 8 0 2 0 23 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCGA...................................................................... 22 1 1 33.00 33 10 1 19 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGTT................................................................... 25 2 1 32.00 32 12 14 0 2 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................................... 21 1 1 32.00 32 20 6 3 2 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCC........................................................................ 20 1 1 32.00 32 19 13 0 0 0 0 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGCC........................................................................ 20 1 1 31.00 31 6 23 0 1 1 0 0 0 0
..........................................................................................................TACGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 31.00 31 11 6 1 13 0 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCAA...................................................................... 23 1 1 31.00 31 6 7 6 10 1 0 1 0 0
..........................................................................................................TGAGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 29.00 29 2 4 4 19 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCC........................................................................ 20 1 1 28.00 28 17 8 0 2 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................................... 21 1 1 28.00 28 20 0 7 1 0 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGCC........................................................................ 20 1 1 28.00 28 3 21 0 4 0 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCAAG..................................................................... 21 0 1 28.00 28 6 1 7 0 14 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCT....................................................................... 21 2 1 28.00 28 28 0 0 0 0 0 0 0 0
.........................................................................................................CGAAGGCACGCGGTGAATGCCA....................................................................... 22 2 1 28.00 28 0 25 0 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAG...................................................................... 22 1 1 27.00 27 8 6 6 4 3 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCAAGT.................................................................... 22 1 1 27.00 27 10 7 3 2 4 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCATG..................................................................... 23 1 1 27.00 27 8 2 17 0 0 0 0 0 0
..........................................................................................................TATGGCACGCGGTGAATGCCA....................................................................... 21 1 1 27.00 27 27 0 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCAAG..................................................................... 23 1 1 27.00 27 10 3 8 6 0 0 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 26.00 26 14 2 5 4 0 0 1 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 26.00 26 2 4 7 12 1 0 0 0 0
..........................................................................................................TAAGACACGCGGTGAATGCCA....................................................................... 21 1 1 26.00 26 18 1 2 4 1 0 0 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCC........................................................................ 20 1 1 26.00 26 3 21 0 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................................... 21 1 1 26.00 26 18 0 8 0 0 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTATA......................................................................................................... 21 0 1 25.00 25 0 0 15 7 0 0 3 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCAAG..................................................................... 23 1 1 25.00 25 7 1 5 8 3 1 0 0 0
..........................................................................................................TAAGGCATGCGGTGAATGCCAAG..................................................................... 23 1 1 25.00 25 9 0 7 7 2 0 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................................... 21 1 1 25.00 25 16 6 1 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCC........................................................................ 20 1 1 25.00 25 8 15 0 1 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATACCAAG..................................................................... 23 1 1 24.00 24 10 0 9 4 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCC........................................................................ 20 1 1 24.00 24 20 2 0 0 2 0 0 0 0
..........................................................................................................TAAGGCACGCGATGAATGCCA....................................................................... 21 1 1 23.00 23 17 1 2 2 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGTC........................................................................ 20 1 1 23.00 23 9 9 0 5 0 0 0 0 0
.........................................................................................................CGAAGGCACGCGGTGAATGCCAAG..................................................................... 24 2 1 22.00 22 0 11 0 11 0 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCCAAG..................................................................... 23 1 1 22.00 22 7 5 3 6 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGTCAAG..................................................................... 23 1 1 22.00 22 5 3 10 4 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCCAAG..................................................................... 23 1 1 22.00 22 10 3 5 3 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCCAAG..................................................................... 23 1 1 22.00 22 5 0 16 0 1 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTCTATG....................................................................................................... 23 1 1 22.00 22 0 0 11 11 0 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCAAG..................................................................... 23 1 1 22.00 22 8 0 11 2 1 0 0 0 0
..........................................................................................................TAAGGCACGTGGTGAATGCCAAG..................................................................... 23 1 1 22.00 22 6 1 7 8 0 0 0 0 0
.........................................................................................................CGAAGGCACGCGGTGAATGCC........................................................................ 21 2 1 22.00 22 0 22 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCA........................................................................ 20 1 1 21.00 21 17 1 0 0 2 1 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCAA...................................................................... 22 1 1 21.00 21 14 0 7 0 0 0 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCCA....................................................................... 21 1 1 21.00 21 10 7 1 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCCAAG..................................................................... 23 1 1 21.00 21 5 4 6 5 1 0 0 0 0
..........................................................................................................TACGGCACGCGGTGAATGCC........................................................................ 20 1 1 21.00 21 10 9 1 1 0 0 0 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCC........................................................................ 20 1 1 21.00 21 2 18 0 1 0 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCAAGT.................................................................... 25 2 1 21.00 21 0 15 0 6 0 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCC........................................................................ 20 1 1 21.00 21 9 7 1 3 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCTAG..................................................................... 23 1 1 21.00 21 12 0 8 0 1 0 0 0 0
..........................................................................................................TCAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 20.00 20 9 8 2 0 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAATT.................................................................... 24 2 1 20.00 20 6 11 0 2 1 0 0 0 0
........................................................................GGCATCCACTGTAGGCCTATATG....................................................................................................... 23 1 1 20.00 20 0 2 0 18 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGCAAG..................................................................... 23 1 1 20.00 20 3 0 17 0 0 0 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGC......................................................................... 18 0 1 19.00 19 1 8 0 0 10 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTATATGA...................................................................................................... 25 1 1 19.00 19 0 0 11 1 2 0 5 0 0
..........................................................................................................TAAGGCACGCGGTGATTGCCAAG..................................................................... 23 1 1 19.00 19 1 4 2 12 0 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTATATGA...................................................................................................... 24 1 1 19.00 19 0 0 8 1 2 0 8 0 0
..........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................................... 21 1 1 18.00 18 11 4 0 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCCAAG..................................................................... 23 1 1 18.00 18 8 2 2 3 1 2 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCC........................................................................ 20 1 1 18.00 18 0 17 0 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAAA.................................................................... 24 1 1 18.00 18 2 6 1 7 2 0 0 0 0
..........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................................... 21 1 1 18.00 18 14 0 0 2 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCC....................................................................... 21 2 1 18.00 18 15 0 3 0 0 0 0 0 0
..........................................................................................................TAAGGCACCCGGTGAATGCCA....................................................................... 21 1 1 17.00 17 13 1 0 3 0 0 0 0 0
..........................................................................................................TAAGGCATGCGGTGAATGCC........................................................................ 20 1 1 17.00 17 12 5 0 0 0 0 0 0 0
........................................................................................................TCTAAGGCACGCGGTGAATGCC........................................................................ 22 2 1 17.00 17 0 16 0 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCAA...................................................................... 22 1 1 17.00 17 12 2 2 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCC........................................................................ 20 1 1 17.00 17 6 8 0 2 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATACC........................................................................ 20 1 1 17.00 17 11 6 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCCAAG..................................................................... 23 1 1 17.00 17 6 1 7 1 2 0 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCCAAG..................................................................... 23 1 1 17.00 17 5 2 4 5 1 0 0 0 0
..........................................................................................................TAAGGCACGCGTTGAATGCCA....................................................................... 21 1 1 16.00 16 14 1 0 0 1 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTAT.......................................................................................................... 21 0 1 16.00 16 4 1 5 1 5 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................ 22 0 1 16.00 16 1 1 6 4 1 0 3 0 0
..........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................................... 21 1 1 16.00 16 11 3 1 0 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTTAATGCCAAG..................................................................... 23 1 1 16.00 16 1 2 4 9 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCAAG..................................................................... 23 1 1 16.00 16 8 0 6 1 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGT......................................................................... 19 1 1 15.00 15 4 3 0 0 7 1 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCC........................................................................ 20 1 1 15.00 15 5 7 0 2 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCAAAG..................................................................... 23 1 1 15.00 15 12 0 2 0 0 0 1 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 15.00 15 0 3 3 9 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCC........................................................................ 20 1 1 14.00 14 10 3 1 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGATTGCC........................................................................ 20 1 1 14.00 14 0 13 0 1 0 0 0 0 0
..........................................................................................................TAAGGCACGAGGAGAATGCCA....................................................................... 21 2 1 14.00 14 12 0 2 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCCAA...................................................................... 22 1 1 14.00 14 10 0 4 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCAGTGAATGCCAAG..................................................................... 23 1 1 14.00 14 7 0 4 2 1 0 0 0 0
..........................................................................................................TAAGGCACGTGGTGAATGCC........................................................................ 20 1 1 14.00 14 6 7 1 0 0 0 0 0 0
..........................................................................................................TAAGGCAGGCGGTGAATGCCA....................................................................... 21 1 1 14.00 14 10 1 2 1 0 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCT............................................................................................................ 19 0 1 13.00 13 8 1 0 0 3 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCCAG..................................................................... 23 2 1 13.00 13 0 0 13 0 0 0 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGCCAAGT.................................................................... 24 2 1 13.00 13 0 8 0 5 0 0 0 0 0
..........................................................................................................TAAGTCACGCGGTGAATGCCAAG..................................................................... 23 1 1 13.00 13 1 4 0 7 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAGGCC........................................................................ 20 1 1 13.00 13 7 4 2 0 0 0 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 13.00 13 4 2 5 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGACA....................................................................... 21 2 1 13.00 13 13 0 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCC........................................................................ 20 1 1 12.00 12 10 0 2 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCAA...................................................................... 22 1 1 12.00 12 5 0 7 0 0 0 0 0 0
.........................................................................................................TTAAGGCACGCGGTGAATGCCA....................................................................... 22 1 1 12.00 12 0 5 0 1 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCTAA...................................................................... 22 1 1 12.00 12 7 2 2 1 0 0 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCC........................................................................ 20 1 1 12.00 12 11 1 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAGGCCAAG..................................................................... 23 1 1 12.00 12 2 3 5 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATCCC........................................................................ 20 1 1 12.00 12 5 6 0 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCC........................................................................ 20 1 1 12.00 12 10 2 0 0 0 0 0 0 0
..........................................................................................................TAAGGCCCGCGGTGAATGCCA....................................................................... 21 1 1 12.00 12 8 0 4 0 0 0 0 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 12.00 12 2 0 6 4 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCC........................................................................ 20 1 1 12.00 12 12 0 0 0 0 0 0 0 0
..........................................................................................................TCAGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 12.00 12 0 8 1 2 1 0 0 0 0
..........................................................................................................TAAGACACGCGGTGAATGCCAAG..................................................................... 23 1 1 11.00 11 4 2 3 2 0 0 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCAAG..................................................................... 23 1 1 11.00 11 3 1 7 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCG....................................................................... 21 2 1 11.00 11 11 0 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAAGGCCA....................................................................... 21 2 1 11.00 11 10 0 1 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAAGCC........................................................................ 20 1 1 11.00 11 10 0 1 0 0 0 0 0 0
..........................................................................................................TCAGGCACGCGGTGAATGCC........................................................................ 20 1 1 11.00 11 0 11 0 0 0 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCAA...................................................................... 20 0 1 11.00 11 4 0 2 0 5 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCAA...................................................................... 22 1 1 11.00 11 5 0 6 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGCCAA...................................................................... 22 1 1 11.00 11 2 0 8 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGC........................................................................ 20 1 1 11.00 11 9 2 0 0 0 0 0 0 0
..........................................................................................................TAAGGCGCGCGGTGAATGCC........................................................................ 20 1 1 11.00 11 4 6 0 0 0 1 0 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCCAA...................................................................... 22 1 1 11.00 11 2 2 4 2 0 0 1 0 0
..........................................................................................................TAAGACACGCGGTGAATGCCAA...................................................................... 22 1 1 11.00 11 4 1 4 2 0 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGC......................................................................... 20 1 1 10.00 10 0 9 0 1 0 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 10.00 10 7 1 2 0 0 0 0 0 0
.........................................................................................................GTAAGGCACGCGGTGAATGCCA....................................................................... 22 1 1 10.00 10 0 0 0 0 10 0 0 0 0
..........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................................... 21 1 1 10.00 10 8 0 1 0 1 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCC........................................................................ 20 1 1 10.00 10 3 7 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTTAATGCC........................................................................ 20 1 1 10.00 10 2 8 0 0 0 0 0 0 0
..........................................................................................................TAAGGCGCGCGGTGAATGCCAAG..................................................................... 23 1 1 10.00 10 4 1 3 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGCAA...................................................................... 22 1 1 10.00 10 3 0 7 0 0 0 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCCAAG..................................................................... 23 1 1 10.00 10 1 3 4 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCAGTGAATGCC........................................................................ 20 1 1 10.00 10 6 2 0 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGACAA...................................................................... 22 1 1 10.00 10 5 0 5 0 0 0 0 0 0
..........................................................................................................TAAGGCACCCGGTGAATGCCAAG..................................................................... 23 1 1 10.00 10 0 2 1 7 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCAA...................................................................... 22 1 1 10.00 10 7 0 3 0 0 0 0 0 0
...........................................................................................................AAGGCACGCGGTGAATGCCAAGA.................................................................... 23 0 1 10.00 10 1 2 0 0 7 0 0 0 0
..........................................................................................................TAAGGCAAGCGGCGAATGCCA....................................................................... 21 2 1 10.00 10 9 0 1 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCCAAG..................................................................... 23 1 1 10.00 10 2 4 2 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCACGT.................................................................... 24 2 1 10.00 10 4 3 0 3 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCTA...................................................................... 22 1 1 10.00 10 7 0 2 1 0 0 0 0 0
........................................................................................................TCTAAGGCACGCGGTGAATGCCA....................................................................... 23 2 1 10.00 10 2 7 0 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGG.................................................................... 24 1 1 10.00 10 1 3 0 2 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCC........................................................................ 20 1 1 9.00 9 9 0 0 0 0 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCAAGA.................................................................... 24 1 1 9.00 9 0 7 0 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCACT..................................................................... 23 2 1 9.00 9 6 1 0 1 1 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCC........................................................................ 20 1 1 9.00 9 9 0 0 0 0 0 0 0 0
.........................................................................................................ATAAGGCACGCGGTGAATGCCAAG..................................................................... 24 0 1 9.00 9 0 0 0 0 9 0 0 0 0
..........................................................................................................TATGGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 9.00 9 8 1 0 0 0 0 0 0 0
.........................................................................................................TTAAGGCACGCGGTGAATGCCAAG..................................................................... 24 1 1 9.00 9 0 0 0 2 7 0 0 0 0
..........................................................................................................TAAGGCACGCCGTGAATGCCA....................................................................... 21 1 1 9.00 9 8 0 1 0 0 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCAAGC.................................................................... 24 2 1 9.00 9 0 7 0 2 0 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCAAGA.................................................................... 22 0 1 9.00 9 3 1 0 1 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCCAA...................................................................... 22 1 1 9.00 9 0 0 9 0 0 0 0 0 0
..........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................................... 21 1 1 9.00 9 5 2 1 1 0 0 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCC........................................................................ 20 1 1 9.00 9 1 8 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGATGAATGCCAAG..................................................................... 23 1 1 9.00 9 1 2 5 1 0 0 0 0 0
..........................................................................................................TAAGGCACACGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 6 0 1 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGCATGCCA....................................................................... 21 2 1 8.00 8 6 0 2 0 0 0 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGC......................................................................... 19 1 1 8.00 8 0 8 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGTGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 3 0 2 3 0 0 0 0 0
..........................................................................................................TAAGGCACCCGGTGAATGCC........................................................................ 20 1 1 8.00 8 2 5 0 0 1 0 0 0 0
..........................................................................................................TAAAGCACGCGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 3 0 3 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAACGCCA....................................................................... 21 2 1 8.00 8 8 0 0 0 0 0 0 0 0
...........................................................................................................AGGGCACGCGGTGAATGCCAAG..................................................................... 22 1 1 8.00 8 6 1 0 0 1 0 0 0 0
..........................................................................................................TACGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 5 0 2 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATACCAA...................................................................... 22 1 1 8.00 8 3 0 5 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGTCAA...................................................................... 22 1 1 8.00 8 0 0 6 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGATGGCCA....................................................................... 21 2 1 8.00 8 8 0 0 0 0 0 0 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 1 2 0 5 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCCTGCCA....................................................................... 21 2 1 8.00 8 8 0 0 0 0 0 0 0 0
..........................................................................................................TAAGTCACGCGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 1 1 1 4 1 0 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 5 0 3 0 0 0 0 0 0
.......................................................................TGGCATCCACTGTAGGCCTATATG....................................................................................................... 24 1 1 8.00 8 0 0 3 4 1 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTAT.......................................................................................................... 20 0 1 8.00 8 1 0 1 1 4 0 1 0 0
..........................................................................................................TAAAGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 8.00 8 2 1 3 2 0 0 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCAA...................................................................... 22 1 1 8.00 8 1 0 7 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAAGGCCA....................................................................... 21 2 1 8.00 8 7 0 1 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCTGTGAATGCCAAG..................................................................... 23 1 1 8.00 8 1 0 3 1 1 1 1 0 0
...........................................................................................................AGGGCACGCGGTGAATGCCA....................................................................... 20 1 1 7.00 7 2 4 0 0 1 0 0 0 0
..........................................................................................................TAAGGCACGGGGTGAATGCCA....................................................................... 21 1 1 7.00 7 4 0 3 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCAGTGAATGCCAA...................................................................... 22 1 1 7.00 7 3 0 3 1 0 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCC........................................................................ 18 0 1 7.00 7 1 3 0 0 3 0 0 0 0
........................................................................GTCATCCACTGTAGGCCTATATG....................................................................................................... 23 2 1 7.00 7 0 0 0 7 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAAAGCCA....................................................................... 21 2 1 7.00 7 7 0 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCACG..................................................................... 23 2 1 7.00 7 2 1 4 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGCATGCCA....................................................................... 21 2 1 7.00 7 6 0 1 0 0 0 0 0 0
........................................................................................................TCTAAGGCACGCGGTGAATGCCAAG..................................................................... 25 2 1 7.00 7 0 3 0 3 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATTCCA....................................................................... 21 2 1 7.00 7 6 1 0 0 0 0 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCCAA...................................................................... 22 1 1 7.00 7 0 1 4 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATAC......................................................................... 19 1 1 7.00 7 0 6 0 1 0 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTT........................................................................................................... 20 1 1 7.00 7 3 0 0 0 4 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCCAA...................................................................... 22 1 1 7.00 7 5 0 2 0 0 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTCTATG....................................................................................................... 24 1 1 7.00 7 0 0 6 1 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAAAGCCA....................................................................... 21 2 1 7.00 7 5 0 2 0 0 0 0 0 0
..........................................................................................................TAACACACGCGGTGAATGCCA....................................................................... 21 2 1 7.00 7 7 0 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGGATGCCA....................................................................... 21 2 1 7.00 7 6 0 1 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCCA...................................................................... 22 2 1 7.00 7 0 0 7 0 0 0 0 0 0
..........................................................................................................TATGGCACGCGGTGAATGCC........................................................................ 20 1 1 7.00 7 7 0 0 0 0 0 0 0 0
.........................................................................................................CGAAGGCACGCGGTGAATGCCAAGT.................................................................... 25 3 1 6.00 6 0 4 0 2 0 0 0 0 0
..........................................................................................................TAAGGCACGCTGTGAATGCC........................................................................ 20 1 1 6.00 6 3 3 0 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCCAA...................................................................... 22 1 1 6.00 6 2 0 4 0 0 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCAA...................................................................... 22 1 1 6.00 6 5 0 1 0 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCAAGT.................................................................... 24 2 1 6.00 6 1 2 2 1 0 0 0 0 0

Anti-sense strand reads

ATAAGGGCACCAGGGCGGAACATACCCCCTAGGTAAAAAGAGTCACGAGCAGCAAACCATGCAAAAAGAGGACCATAGGTGACATCCGGATATACATAAAGCTGGTATTCCGTGCGCCACTTACGGTTCTCGCCTGCTTTGAGATGATAGTTTTTGTCGTTTGCTGCGGTTTTCACAAATTCTTTTACACTTATTTTC

********************************************************....(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 GSM343916

embryo

 V112

male body		 SRR902010

ovaries

 GSM444067

head
.......................................................................................................GGTATTCGGTGCGCCAGT............................................................................. 18 2 1 1.00 1 0 1 0 0 0
..............................................................AAAAAGAGGACCAAAGGTG..................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
...............................................................AAAAGAGGACCAAAGGTG..................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0
..............................................................AAACAGAGGACCAAAGGTG..................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0
...................................AAAAGAGTCACGAGTAGTAGA.............................................................................................................................................. 21 3 5 0.20 1 0 0 1 0 0
......................................................................................TGGATATACATAAGGTTGGT............................................................................................ 20 3 12 0.17 2 0 2 0 0 0
......................................................................................CGGGTATACATAAGGTTGGT............................................................................................ 20 3 9 0.11 1 0 1 0 0 0
.............................................................AAAAAAGAGGACCAAAGGTG..................................................................................................................... 20 2 9 0.11 1 0 0 0 1 0
................................................................AAAGAGGACCTTAAGTGACCT................................................................................................................. 21 3 10 0.10 1 1 0 0 0 0
...................................AAAAGGGTCACGAACAGC................................................................................................................................................. 18 2 14 0.07 1 1 0 0 0 0
.......................................................................................................................................................TTTGGTCGATTGGTGCGGT............................ 19 3 16 0.06 1 0 0 1 0 0
.......................................................................................GGGTATACATAAGGTTGGT............................................................................................ 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 4_group3:10867578-10867775 - dps-mir-124 Known_mirbase TATTCCCGTG-----------GTCCCGCCTTGTAT---------------------------------------GGGGGATCCATT--------------------T---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-----TCAAA-----------------AACAGCAAACGAC---GCCAAAAGTGTT--TAAGAAA-------AT-------------GTGAATAA-AAG
droPer2 scaffold_8:2078675-2078872 - dpe-mir-124 Known_mirbase TATTCCCGTG-----------GTCCCGCCTTGTAT---------------------------------------GGGGGATCCATT--------------------T---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-----TCAAA-----------------AACAGCAAACGAC---GCCAAAAGTGTT--TAAGAAA-------AT-------------GTGAATAA-AAG
droWil2 scf2_1100000004577:940153-940365 - dwi-mir-124 Known_mirbase T-----CGCG-----------ATCGC---------CCTTGGATATCAAATTCTTTATGAATTGACATACATTTTGGAG--TGCTTT--------------------A---T----------------TCTCA-------GAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAAA-CCAAAACG-------CAAA----AA----------T-ATAAAAA------T--AAAGAAA-------AC-------------GGACAAAA-AAG
droVir3 scaffold_12963:16493156-16493302 + dvi-mir-124 Known_mirbase -----------------------------------------------------------------------------------------------------------------------------------AGTGC----CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTAACAAA-------------------AATAACAAACGACCTGACAAAAAGTGTCCTTA-------------------------------------AG
droMoj3 scaffold_6500:21419485-21419606 + dmo-mir-124 Known_mirbase --------------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAATC-------------------------CAACAAGCGAC-CTCT--A------------------------------------------------AA
droGri2 scaffold_15252:13906826-13906979 + dgr-mir-124 Known_mirbase --------------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTC-C---ATTC--------AAATATAACCAGCAAACGAC-TGCTTTAAAGTGTG--T----------------------------GTGAAGTG-AAA
droAna3 scaffold_12916:3309682-3309858 - dan-mir-124 Known_mirbase TATTTCTTCGAGTTC-CTGTCTTCC----------C---------------------------------A-TT------------------------AAGATGGTTA---TGCA--ATCG-CCTTGCCCAGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACTAC----------------------------AAATGAC----------------------------------------------------------
droBip1 scf7180000396737:1463446-1463623 + TATTTCTTCGAGTTACC-GTCCTCC----------C---------------------------------A-TTC-----------------------AAGATGGTTA---TGCA--ATCG-CCTCGCCCTGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAATC--T--------------------------CAAACGAC----------------------------------------------------------
droKik1 scf7180000302246:118920-119128 - TATTCCTGCCCCTGG--------------------------ATATTT-CCTCATCATAATT------CGG-TTC--------------------------ATAATTA---CGCA--ATGA-GGACCCCTGAAGTGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTTACTCAAAAATTTAAC-TAAA----AA----------C-CAGTTAAGAGTGTT--TA---------------------------------------
droFic1 scf7180000453855:351009-351179 + TATTCTCGCCCCTGG--------------------------ATAT----------------------ATT-TGC--CC--AGCTTTTGTGACGACGT--------TA---TGCA--ATGA-GTAAAGCCCAAGTGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC----------------------------------------------------------------------------------------------------
droEle1 scf7180000491046:269562-269761 + TATTTCCTGAGCTTCAG----------------------------------------------------C-TTC-----------------------AATGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTTACTCAAACAAAAAACAAAGC----GA----------C-AAACAAAAAGTGTT--TA---------------------------------------
droRho1 scf7180000758059:247-453 + TATTTCCTGAACTTCAG------------------------------------------CC------A-----C--------------------------ATCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCAAAGC--------AAA----TA----------C-AAACAAAAAGTGCT--TAAAAAG-------GC-------------CTACAAAT-AAG
droBia1 scf7180000302422:6140579-6140794 - TATTCCCCCAGCTTCAG------------------------------------------CA------G-C-T-----------------------------TTGTTA---TGCA--ATGA-GTAAAGTCCAAGTGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAGG----AA----------C-CAACAAAAAGTGTT--CAGAAG-CCT------CATAAAATATAAA-----AGG-AAT
droTak1 scf7180000415617:20642-20832 - TATTTCCTCAACTTCAG------------------------------------------TA------A-----C--------------------------TTCGTTA---TGCA--ATGA-GTTCAGCCCAAGTGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATAAT-------TATA----AA----------C-AAACAAAAAGTGTT--TAA--------------------------------------
droEug1 scf7180000409016:190068-190224 + TATTTCCTCAACTTGAG------------------------------------------AT------ACT-TCC--------------------------GCTGTTA---TGCA--ATGA-GTAAACCCCAAGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC----------------------------------------------------------------------------------------------------
dm3 chr2L:17566303-17566522 + dme-mir-124 Known_mirbase TATTATCGCAACTTCAG------------------------------------------TG------AGT-TTC--------------------------GTTGTTACATTGCATAACGACATAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----AA----------T-AGACAGAAAGTGTT--TAAAAG-CCT-GAAA---------------T-CATAA-TAG
droSim2 2l:17125742-17125936 + dsi-mir-124 Known_mirbase TATTACCGCAACTTCAG------------------------------------------TG------AGC-TTC--------------------------GACGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----GA----------T-ACACCGAAAGTGTT--TAA--------------------------------------
droSec2 scaffold_7:1207259-1207474 + dse-mir-124 Known_mirbase TATTACCGCAACTTCAG------------------------------------------TG------AGC-TTC--------------------------GTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----GA----------T-AGACAGAAATAATA--GACAAA-TTT------CAAATAATA---------AAG-AAA
droYak3 2R:3533184-3533340 - dya-mir-124 Known_mirbase TATTTCCTAAACTTCAG------------------------------------------TG------AGT-TTC--------------------------GTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC----------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:6683910-6684128 - der-mir-124 Known_mirbase TATTTCCGCAGCTTCAG------------------------------------------TG------AGT-TTC--------------------------GTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----GA----------T-AGACCAAAAGTGTT--TGAAGG-CCCTAAAAC-------------TTCAATAACAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TATTCCCGTG-----------GTCCCGCCTTGTAT---------------------------------------GGGGGATCCATT--------------------T---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-----TCAAA-----------------AACAGCAAACGAC---GCCAAAAGTGTT--TAAGAAA-------AT-------------GTGAATAA-AAGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................21149140.004914033959211850993038344324580033
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................23120538.002053803094457824654518555712610199
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20113545.0013545169761663382075470215001
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................2217820.0078200331117237822703599190051
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................2411723.00172301103497267244021005
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................2411271.0012711127281423461202000334
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................191933.009330132404614252340010
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................211619.006192512193123545000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................231610.00610116198619414020179
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................241593.0059305287252241714003
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201502.00502034423751131000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................221421.004210283162245512002
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................211295.0029502145232240000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC....................................................................................................................241210.00210046211912130000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231178.00178018582330432004
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................191120.001200632400150000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................231111.001110068236140000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211110.00110016915790000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................22194.00940433155370000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................23187.00870423266280000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................22178.00780111237350001
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................18169.0069013343382006
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21156.0056029345131001
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATAT........................................................................................................................................................23151.0051031118710020
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATA.........................................................................................................................................................22150.0050041012610008
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23141.0041071160170000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................20138.0038021221120000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTA...........................................................................................................................................................20135.003506011240003
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT....................................................................................................................23134.0034012316120000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19133.003302300280000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT...................................................................................................................25132.0032042140120000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.....................................................................................................................21128.002801401760000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22127.00270346680000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT....................................................................................................................22127.002704273101000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................21125.002500701500003
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................20121.002102010171000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT....................................................................................................................24120.002001211060000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18119.001901008010000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA......................................................................................................................................................25119.001902101100005
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGA......................................................................................................................................................24119.00190210800008
...................................................................................................................................................................TGGTATCCACTGTAGGCCTAT..........................................................................................................................................................21116.00160511540000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................................................................22116.00160141610003
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................19115.00150703041000
...................................................................................................................................................................TGGTATCCACTGTAGGCCT............................................................................................................................................................19113.00130301080001
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA......................................................................................................................20111.00110500240000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA....................................................................................................................23110.00100702010000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG....................................................................................................................24110.00100423010000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT.....................................................................................................................2319.0090111060000
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2419.0090900000000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA....................................................................................................................2219.0090411030000
....................................................................................................................................................................GGTATCCACTGTAGGCCTAT..........................................................................................................................................................2018.0080410110001
........................................................................................................................................................................................................AGGCACGCGGTGAATGCC........................................................................................................................1817.0070303010000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTT...........................................................................................................................................................2017.0070400030000
droPer2
TATTCCCGTG-----------GTCCCGCCTTGTAT---------------------------------------GGGGGATCCATT--------------------T---T----------------TCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA-----TCAAA-----------------AACAGCAAACGAC---GCCAAAAGTGTT--TAAGAAA-------AT-------------GTGAATAA-AAGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................21162853.006285384984992971831672458
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20114609.00146091535852449033220
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................23110994.00109942534750945675365181
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................2214506.00450615582592796134038
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................241955.009550171233057521
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................191889.00889022121259955
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................211685.006850901605115
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................241482.004822514621522272
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................211473.004730021932780
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................241389.00389011413922312
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211251.00251011611880
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201247.002470412831210
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................231192.001921353331191
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................221116.00116035233460
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231114.0011401355532
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181103.0010303219790
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................22197.009702141530
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................22185.008500143410
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................23167.006701023430
...................................................................................................................................................................TGGTATCCACTGTAGGCCTA...........................................................................................................................................................20153.005302021300
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................23146.004600116290
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................20144.004400022220
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................19138.003804011230
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................20131.00310009220
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT.....................................................................................................................23131.00310006250
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC....................................................................................................................24128.002801010170
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATA.........................................................................................................................................................22126.0026308960
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21126.00260401570
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19125.00250209140
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT....................................................................................................................22122.002200010120
...................................................................................................................................................................TGGTATCCACTGTAGGCCT............................................................................................................................................................19118.00180102150
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT...................................................................................................................25116.0016000790
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23116.00160005110
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.......................................................................................................................21116.0016000790
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.....................................................................................................................21115.0015021660
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................19114.00140002120
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATAT........................................................................................................................................................23114.00140011030
...................................................................................................................................................................TGGTATCCACTGTAGGCCTAT..........................................................................................................................................................21113.0013000760
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG.......................................................................................................................21113.00130001120
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG....................................................................................................................2419.009000180
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................2219.009000180
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................2118.008201140
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT....................................................................................................................2418.008000521
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT....................................................................................................................2318.008020150
...................................................................................................................................................................TGGTATCCACTGTAGGCC.............................................................................................................................................................1818.008000170
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA....................................................................................................................2217.007000250
droWil2
T-----CGCG-----------ATCGC---------CCTTGGATATCAAATTCTTTATGAATTGACATACATTTTGGAG--TGCTTT--------------------A---T----------------TCTCA-------GAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAAA-CCAAAACG-------CAAA----AA----------T-ATAAAAA------T--AAAGAAA-------AC-------------GGACAAAA-AAGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................21176943.007694349918907293438639439
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................22124092.00240928728063218781784
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................19123262.002326229668534722735
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20120630.0020630549245360221717259
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2315236.005236651423334711525
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231491.00491341377106
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201309.00309117414786
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181291.0029146413264
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................201263.002630016256
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................211244.00244254712196
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................231193.0019312113950
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211158.00158132126116
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................241123.001234503579
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................191110.001100002108
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................21198.00983002867
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................24181.00811613241
....................................................................................................................................................................GGTATCCACTGCAGGCCTATATG.......................................................................................................................................................23176.007638120206
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21156.00560200306
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................19152.00520210229
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18147.0047050339
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................22142.004211301711
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................19137.0037011035
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................22136.00360102411
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................22136.0036410823
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19136.00360911511
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................20125.0025003517
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................23121.0021000138
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22119.0019210115
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG........................................................................................................................20113.0013000013
......................................................................................................................................................................................................TAAGGCACGCGGTGAATCA.........................................................................................................................1927.5015000114
...................................................................................................................................................................TGGTATCCACTGCAGGCCTATATG.......................................................................................................................................................2417.00711050
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGG.........................................................................................................................1916.00610005
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.....................................................................................................................2115.00500050
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT....................................................................................................................2415.00500041
droVir3
-----------------------------------------------------------------------------------------------------------------------------------AGTGC----CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTAACAAA-------------------AATAACAAACGACCTGACAAAAAGTGTCCTTA-------------------------------------AGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................211126422.001264229813934141511807030000172509625480897771020349926159781836411022191561105022811501000010111743512111108028224428012111016000020012
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATG.......................................................................................................................................................23160381.0060381156123753020000000000104451100700000000000020000273641746228942483321761433960744958023827523243342852211401135615434000131331263511000701982106785
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20119738.00197385102620533000401100012199154539751341657119511694000000200000002000000000000000110291298886524600001109005000165
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................2219515.009515174155521200000000121293038569848938518211133000013203106262313000100030025125710110122135419313500100001000020001
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................2113666.003666071400000000003832421252644132860148811900000000000000000000000000000000000114319000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................1912407.002407081122800010000008579426997390103117000000000000000000000000000000000011315654500000000002001405
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG.......................................................................................................................................................2412306.0023060100190000000000100100012000000000000000001244310382119244182264218154213138171311450911000028000000210674
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2311958.00195855106151000000000022513177166938401852760000000000000110000000100331412612710121832751000000100000000002
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................211977.009770152770001000000397231425215098800000000000000000000000000000000000010491600000000000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201544.005440036780000000000201341413403030000000000000000000000000000000000000041000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231531.005310014290000000000675030662535048770010001000001110000000000000201300031362100000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTA.........................................................................................................................................................211260.00260214114000000000000011000000000000000000100000001779341137191219130103810000001400000011100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211211.00211067200000000009251443015200000000000000000000000000000000000003112000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................231206.00206006250000000000411732210502327000000000000000000000000000001000000518200000000010000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................221198.00198001620000000000281471217902931000000000000000000000000000000000000032100000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTAT........................................................................................................................................................221168.001681102400000000000101000020000000001001000000010931196201984100003142100010001000001121
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181144.001440011100000000008109117701212000000000000000000000000000000000001152000000000000001100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................221126.00126003130000000000196311990166000000000000000000000000000000000000525100000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATA.......................................................................................................................................................231111.0011100010000000000000000000000000000000000000000110691671569570001710000000100000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................24184.00840054000000000098293100416000000000000000000000000000010000000013000000000000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................19183.0083015210000000000021241042000000000000000000000000000000000000112000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................24173.00730041200000000001051714038000000000000001000000000000000000000116000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCT..........................................................................................................................................................20164.006401406000000000000011000100000000000000000001000013025324000522000003201000013001
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21162.006200406000000000040001303100000000000000000000000000000000000013000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATT.......................................................................................................................................................23160.006009000000000000000010000000000000000000000000001041403440009190000000100000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA......................................................................................................................................................24155.005500020000000000000000000000000000000000000000024094108522100500000000000000000100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23150.005000300000000000850542011700000000000000000000000000000000000004100000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................20149.004900000000000000520300023000000000000000000000000000000000000033000000000000000001
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19145.0045002100000000000400111033000000000000000000000000000000000000011000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCT............................................................................................................................................................18138.003801900000000000000000000000000000000000000000000023305120000300000000000000000000
............................................................................................................................................................................CTGTAGGCCTCTATG.......................................................................................................................................................15136.00360000000000000000000000000000000000000000000002123253044010900000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22136.00360083000000000012121203600000000000000000000000000000001000015000000000000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................22136.003600108000000000033021003300000000000000000000000000000010000110000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT......................................................................................................................................................24134.00340301000000000000000000000000000000000000000002103226022000900000000000000000100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................23131.00310019000000000030032201200000000000010000000000000000000000114000000100000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATC.......................................................................................................................................................23129.00290101000000000000000000000000000000000000000000052282221000300000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATAT......................................................................................................................................................24122.00220000000000000000000000000000000000000000000002030432103000400000000000000000000
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.......................................................................................................................22121.002100180000000000000010100100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TCCACTGTAGGCCTCTATG.......................................................................................................................................................19120.002001700000000000000000000000000000000000000000000000001010000100000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT....................................................................................................................24118.00180002000000000051013002200000000000000000000000000000000000101000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................20117.001700010000000000100010011000000000000000000000000000000000000012000000000000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18114.00140080000000000002000000000000000000000000000000000000000000004000000000000000000
.........................................................................................................................................................................CCACTGTAGGCCTCTATG.......................................................................................................................................................18113.001301000000000000000000000000000000000000000000000100010000000100000000000000000000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCTA.........................................................................................................................................................22112.00120000000000000000000000000000000000000000000000112021030000100000000100000000000
......................................................................................................................................................................TATCCACTGTAGGCCTCTATG.......................................................................................................................................................21111.00110400000000000000000000000000000000000000000000000110000201200000000000000000000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT........................................................................................................................................................23111.00110000000000000000100100100000000000010000000001100101001000110000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................19111.00110010000000000000000000000000000000000000000000000000000000019000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.......................................................................................................................21110.00100000000000000010000001000000000000000000000000000000000000017000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAAT...........................................................................................................................1719.0090000000000000000000000000000000000000000000000000000000000104000000100000010020
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCT..........................................................................................................................................................2119.0090200000000000000102000100000000000100000000000000001000000001000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATTT....................................................................................................................2419.0090000000000000001220001200000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................1919.0090010000000000001000000100000000000000000000000000000000000006000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAATC-------------------------CAACAAGCGAC-CTCT--A------------------------------------------------AASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................211148445.0014844556403768316744978456696883
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................22149537.00495376843483181329034057975
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20133691.003369164426210559150926791343
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2319441.009441309488600926708830
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATG.......................................................................................................................................................2315658.0056589704232748878
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................1914792.004792128916912282549133
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................2112286.00228654684713284011
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................2311720.0017201480508714872
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................2311224.0012241614396610890
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................211996.00996045663270180
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................221977.0097731633259000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201961.00961518537703292
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................231402.0040219163850
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG.......................................................................................................................................................241367.00367261652921
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................241362.003627730612534
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................211355.00355685362730
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211347.0034721194165741
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................221289.0028940445901091
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181238.0023810683125113
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTAT........................................................................................................................................................221188.00188019011680
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................241147.001471341448671
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................221128.0012832444840
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................191109.00109550219330
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTA.........................................................................................................................................................211108.0010803001050
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................20196.0096003643170
....................................................................................................................................................................GGTATCCACTGTAGGCCTCT..........................................................................................................................................................20194.00940500890
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................20170.007012204223
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23164.006470113790
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19163.00631901117151
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT....................................................................................................................24161.00611047490
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22151.005186611200
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC....................................................................................................................24142.00420111390
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................19141.004100112703
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA......................................................................................................................................................24137.00370000370
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTAC........................................................................................................................................................22126.00260000260
....................................................................................................................................................................GGTATCCACTGTAGGCCTCC..........................................................................................................................................................20123.00230000230
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA......................................................................................................................20123.00232101190
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT........................................................................................................................................................23122.002201001110
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18121.00211501230
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATT.......................................................................................................................................................23121.00210611130
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT....................................................................................................................24120.00200000200
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT.....................................................................................................................23119.00190041140
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.......................................................................................................................22118.00181201320
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT.......................................................................................................................21117.00170071000
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT......................................................................................................................................................24117.00170300131
droGri2
--------------------------------------------------------------------------------------------------------------------------------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTC-C---ATTC--------AAATATAACCAGCAAACGAC-TGCTTTAAAGTGTG--T----------------------------GTGAAGTG-AAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................211652.0065258765
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................231164.0016415014
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................22189.0089809
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................20167.0067670
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20149.0049454
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................24110.001082
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................2218.00880
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................1916.00660
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................2115.00550
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.......................................................................................................................2215.00550
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG.......................................................................................................................................................2415.00523
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................1915.00550
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................1913.00321
....................................................................................................................................................................GGTATCCACTGTAGGCCTCTATG.......................................................................................................................................................2313.00321
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................2313.00330
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................2413.00330
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................2312.00220
...................................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT........................................................................................................................................................2312.00211
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA....................................................................................................................2312.00220
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................2212.00220
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT....................................................................................................................2411.00110
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAT.....................................................................................................................2411.00110
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................2311.00101
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................2211.00110
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2411.00110
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................2111.00110
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGCT...................................................................................................................2411.00110
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................1811.00110
..................................................................................................................................................................CTGGTATCCACTGTAGGCCTCT..........................................................................................................................................................2211.00110
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG....................................................................................................................2411.00110
droAna3
TATTTCTTCGAGTTC-CTGTCTTCC----------C---------------------------------A-TT------------------------AAGATGGTTA---TGCA--ATCG-CCTTGCCCAGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACTAC----------------------------AAATGAC----------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................21186069.00860691689183029734073128346897
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20150146.00501463541236471421188333415
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................19137468.0037468156742323925033747
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................2214890.0048901396499322241351650
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2313791.003791218350341151661972
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................2112160.0021602551961371131
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181511.005118111725324
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211445.0044553120711218
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................211442.00442014343490
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................231342.003427951752216
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................201323.00323010646252
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201288.0028813010067180
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231211.002114382622103
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................241209.002093253514123
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................241193.001931290533116
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................191192.00192000180174
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................201167.0016715077975
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................191158.001585002310120
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................241117.001171117426455
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................19199.0099219021246
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18180.008011001068
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................23176.0076110119144
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................22173.007350137129
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................22162.006219239011
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................22151.0051272012010
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................23141.004102011406
..................................................................................................................................................................CTGGTATCCACTGTAGGCCTATA.........................................................................................................................................................23132.00321000130
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21129.00297301009
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22129.00295002202
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19127.00276008013
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG........................................................................................................................20127.00270008118
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................21121.00211530012
......................................................................................................................................................................................................TAAGGCACGCGGTGAATT..........................................................................................................................18119.0019200908
........................................................................................................................................................................................................AGGCACGCGGTGAATGCC........................................................................................................................18118.00181007010
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATA.........................................................................................................................................................22118.00180103014
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23117.00170001106
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................................................................22116.0016082105
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGG.........................................................................................................................19114.00140003110
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCTT......................................................................................................................22112.0012000606
......................................................................................................................................................................................................TAAGGCACGCGGTGAATC..........................................................................................................................18112.00120001011
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG.......................................................................................................................21112.00120001101
droBip1
TATTTCTTCGAGTTACC-GTCCTCC----------C---------------------------------A-TTC-----------------------AAGATGGTTA---TGCA--ATCG-CCTCGCCCTGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAATC--T--------------------------CAAACGAC----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TATTCCTGCCCCTGG--------------------------ATATTT-CCTCATCATAATT------CGG-TTC--------------------------ATAATTA---CGCA--ATGA-GGACCCCTGAAGTGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTTACTCAAAAATTTAAC-TAAA----AA----------C-CAGTTAAGAGTGTT--TA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TATTCTCGCCCCTGG--------------------------ATAT----------------------ATT-TGC--CC--AGCTTTTGTGACGACGT--------TA---TGCA--ATGA-GTAAAGCCCAAGTGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TATTTCCTGAGCTTCAG----------------------------------------------------C-TTC-----------------------AATGTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTTACTCAAACAAAAAACAAAGC----GA----------C-AAACAAAAAGTGTT--TA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TATTTCCTGAACTTCAG------------------------------------------CC------A-----C--------------------------ATCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCAAAGC--------AAA----TA----------C-AAACAAAAAGTGCT--TAAAAAG-------GC-------------CTACAAAT-AAGSizeHit CountTotal NormTotal
No Reads
droBia1
TATTCCCCCAGCTTCAG------------------------------------------CA------G-C-T-----------------------------TTGTTA---TGCA--ATGA-GTAAAGTCCAAGTGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAGG----AA----------C-CAACAAAAAGTGTT--CAGAAG-CCT------CATAAAATATAAA-----AGG-AATSizeHit CountTotal NormTotal
No Reads
droTak1
TATTTCCTCAACTTCAG------------------------------------------TA------A-----C--------------------------TTCGTTA---TGCA--ATGA-GTTCAGCCCAAGTGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATAAT-------TATA----AA----------C-AAACAAAAAGTGTT--TAA--------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TATTTCCTCAACTTGAG------------------------------------------AT------ACT-TCC--------------------------GCTGTTA---TGCA--ATGA-GTAAACCCCAAGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TATTATCGCAACTTCAG------------------------------------------TG------AGT-TTC--------------------------GTTGTTACATTGCATAACGACATAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----AA----------T-AGACAGAAAGTGTT--TAAAAG-CCT-GAAA---------------T-CATAA-TAGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................211710203.007102030000399013672026213601581071159015093306885390018121039420136225118349578263113111000220360203012000311717205030000000000000000010211047738317236177986523241115920644915492709141996714321627493140317476832115291376088188318105516547656460810154348366496427591341209317352440513832775151996626847663336561610000000000189161592910020001604520000008012814121841693501038559244388111552591296016846902345355441921700133031041443020560432000007001420324201744392300030000200006300670487344136211185185513358251039682297020135316103032321701210015940311441304106121767340122612635068816130412444109313542146183673323713541213693230020211121115430597306100531039271271218
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................221237584.0023758400009583832220160517601501046134095317614401002202006205224401060100000100000020010003321736200000000000000000021223734154774255573881615723796944657184480429119608180460177013831347461891564130118641943452182199154116481620890342325771639282540130165312773116420100000000001392619287701001200400000000170006801129080150265520215716284130632000008279141000505000000110000000116133811000302000056002881282815421520012344861128020004540000000010010001101007050000054710177989321114419712456402801157096165000021011000002175612322941723104200
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................201191799.0019179900001154025352152080922111080000404424467330561877108780000001000800100000001931124900000000000000000000043915131232441001120614144188121576358171591177456719711867301313110615031111522102721514608446115248979461512110000000000262280000010000101000000004617312887011821961552219879334656179281365159212104730210140300130141000000000000017050151156011000010000220041750207741189818912192765150106888011001700001100027000000261014110100251495614861181802797869954494169960120421251112916430200503000000020304295785431844422713341117114
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................19151356.005135600000000000000684010200000020219204242543770000000000000000000002816700000000000000000000066255181106010421312034142112277641005035218621027217089127012340431721371980000000000505400000011000000000000201813480103921313112146724175580270000035960700004020000000000000150000116000001000000000019402892353291093304976149500000386000000011000000000000000000139742562521167323543517222000218401061310000000000000000172180921614276102840113110
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................23131933.003193300009140812213912947045202517000000100101856745101000000000000000000000054332200000000000000000000094121511697179242039491822181653879835169859325237124711621243131610583660558398117810011046415014119116135000000000037738123101000000000000000000405696038220102452619629113861406610010025833020000200000000000000000001117020513230000000050157914835450001434691104020001810000000010100000511010300002820158312481359437185013052330100940478000000000012000111087919301091523001500
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................21111343.00113430000500011001000000000000000000000000000000000000000000000000000000000000000000028202611300004151994188212511554212013212000021072201163228529410288075123129276535874300000000004020000000000000000000002126921101570051001303041000001600000000000000000000000000000000000000000000100694804261311002140170024000001600000000000000000000000000002855413117541040000003801109132000000000000000024000100000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................23110344.0010344000012123084304680100000000000026214246503510000000000000000000002010000000000000000000001350710522611204280110131592710581455410125913421200032121422791040713201209049260371131410000000000210227610000000300000000000005055080622756050502214918316378000002900000000000000000000000000001000001000000000000158144010111000173307000004000100000000000000000000001164102871451475603211312110012018180000000200000000213921511000100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................2319113.00911300005400435508453030011110000300000000001000000000000000000000000000000000000000000000966020686640520814110247113124742187514814618423329522231812939131419405006700901203027228380000000000817040000000000000000000001181990870014110521040900735000004010020000101000000000000000101000000000100000010056570215000018410140000012100000000000000000000010000075102708319112149000000120711000000000000000002800202000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................1817444.00744400000000000000100130000402001935929430000000000000000000000100000000000000000000000159025447000416115161654122697114215739001041124217250712416010251094710000000000000100000000000000010000000213608502036459222847620000043103000010100000000000008000000300000000000000005160480300111225180000013000000000000000000000000000020911425733789321100000380313100000001000000004624431795317001000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................2114729.00472900004700001229301400410000000000000000000000000000000000000000000000000000000000000128002422000232519811916381914173195690050201630025098419017210907928800000000000010000000000000000000000016218201000025654421530246000006010100000000000000000000000000000000000000005100121101510930027946002500000280000000010000000000000000000132871532452102201000090670000000000000000241231112000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................2013007.00300700003000020210000010000000000000000000000000000000000000737013000000000000000000000700111600020717125102210111014223000200111263031112121350269260330826000000000000000000000000000000000000381340019000562146185097013180000020110000000000000000000000000000000000000000000000580115100071302000006000000000000000000000000000028334052321330000002022000000000000000001510111000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................2112959.002959000035200210231070013000010000000000000000000000000000000000000000000000000000000020710162300032152261392565266527455881301105157720260140501102401114040122180000000000000000000000000000000000001401180800093602322001910000046000000000000000000000000000100100000000000000001621036730003170070001028000000000000000000001000000031595454030531100007045000000000000000005601100000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................2312270.00227000001010082201100100310000200000000000000000000000000000000000000000000000000000000195714514400060226148111982014202855707270202018065690160110000101016187000000000021200000000000000000000000293902700242902901008000000580000000000000000000000000000000000000000000140015190121000790100000300000000000000000000000000001144221941621000000500400000000000000001601000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................2412147.002147000082000412200001000000000001423201000000000000000000000052000000000000000000010094051200013318521141520231016243200400333527010354040614011114120000000000000000000000000000000000004486051001234014704317510000002652030000204000000000000000000000010000000000000028021620001330090000011000000000000000000000000000087140788722213500000010024000000000000000022520300000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................2212123.0021230000132121624212303005100000000000000000000000000000000000000000000000000000000000003212015995000451161135401316173414368352207011422490190201010711023141400000000000000000000000000000000000027360211051302309043000006000000000000000000000000000000000000000000064002601500004300100000200000000000000000000000000002516153004110000005002000000000000000012010010000000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................2411517.0015170000400143000040000000000000000000000000000000000000000000000000000000000000000021126566000015204230012392000300005215030750204050415200000000004141360000000000000000000001526019002182170263491000000600000000000000000000000000000000000000000000000443202400005160100000900000000000000000000000000013686761032432304100000030610000000010000000017920915000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................2211470.00147000003200120200200110000000000000000000000000000000000000000000000000000000000000388333389000119323831310552516192100300201615801014560104110382392100000000001020000000000000000000000018150130045040101000000100000000000000000000000000000000000000000000100013902160000340200000400000000000000000000000000004371761611000000700300000000000000000300000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................2011421.001421000014200010200200110000001000000006000000000000000000000000000000000000000000000200100000001107151003430001001031101226101020140100390000000000000000000000000000000000001216040183132301311220000021000000000000000000000000000000100000000000000004101280001511805000006000000000000000000000000000050286382051011000040480000000000000000566622011000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................1911384.0013840000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000000020000000000000040000000000510000000000000000000000000000000000000500001519090030000030000000101000000000000040000000000000000000000000031000001850100000200000000000000000000000000002410122400000200001002000000000000000012113321011000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................2411280.00128000006000110200000300000000000000000000000000000000000000000000000000000000000000921233600011714124106212151112166000401002519130001220301110915700000000000010000000000000000000000020330220057171291280310000001320000000000000000000000000000000000000000000000012150124000033505000003000000000000000010000000000030373030530430000004036000000000000001017120010000000
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.......................................................................................................................2211056.00105600001600019160051004000000000000000000000000000000000000000000000000000000000000030006391003114403381835152317454905004011025591100000000006034000000000000000000000000000000000000000200000300000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021110200000000000000000000000000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................221738.007380000160007162810100000000000000000000000000000000000000000000000000000000000000000211415265000207393172935641128166200001115440150603100020005014000000000000000000000000000000000000620300250402030000005000000000000000000000000000000000000000000000004400300001400000002000000000000000000000000000033291200000000200000000000000000000600000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................201724.0072400005000000100000000000100000000000000000000000000000000000000000000000000000000700000001008000010000461000000000001112000050201601110000000000000000000000000000000000000613080011501408010000000910000000000000000000000000000000000000000000000010317300056402000003000000000000000000000000000023263635023001000020240000000000000000427001111000000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................191682.00682000000000000000000000000000000000000000000000000000000003000000000000000000000001300513100311315014116171782122400000001621000300302100100000000000000000000000000000000000000018150200076090506000000280000000000000000000000000000000000000000000000053010000007050000020000000000000000000000000000111091301110000000001100000000000000000200000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................191628.006280000000000000031000000000001000000000000000000000000000042100000000000000000000040000000000001102000190000000002002016002011050402300000000000000000000000000000000000060580260115472480410420000005600000000000000000000000000000000000000000000000000170000350400000400000000000000000000000000001620283702100000002010000000000000000002400000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................191616.0061600000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000110002000402200000000000000000000000000000000000026020007010501000000300000000000000000000000000000000000000000000000000012000003701000002000000000000000000000000000037275017000000000040320000000000000000537140100000000
.....................................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAA......................................................................................................................231606.006060000200175140000005000000000000000000000000000000000000000000000000000000000000092506315000040109132161113161815500000000243370100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATC.....................................................................................................................231551.005510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010110000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335208000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................................................................221535.00535000010005100000000000000000100000000000000000000000000000000000000000000000000002397139774001063034000021714000101006187010000000000001200000000001107100000000000000000000027044146320645300000300000000000000000000000000000000000000000000000860020000110000000000000000000000000000000000004511611200000000001100000000000000000400000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATC....................................................................................................................241467.004670000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000100001000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000278180000000000000100000000000000000000000000000000000000010100000000000000000000000000000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................231466.004660000100032041000000000000000000000100000000000000000000000000000000000000000000061125570000082302022120346440000000115241406012000000004027000000000000200000000000000000000000460500551203020000001800000000000000000000000000000000002000000004200480000000140100000000000000000000000000000000006117932300010000100100000000000000000500000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................211461.0046100002000001200000000000000000000000000000000000000000000114200000000000000000000077044430015165028230310319640002000074301010010022201011000000000000000000000000000000000000232201300114011050900000016000000000000000000000000000000000000000000000006300000003000000002000000000000000000000000000011220800000000000000000000000000000000000000000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA......................................................................................................................201283.002830000100000000000000000000000000000000000000000000000000001000000000000000000000016628760003053010222131911540000000061540000000000000000000000000000000000000000000000000000040100020100000000003000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGA......................................................................................................................................................241270.00270000000004010000000000000000000000000000000000000000000000000000000000000000000000120996510000010212001002000000001160050000000000000000000000000000000000000000000000000020000001100100000000000000000000000000000000000000000000000000000000230000000000000000000000000000000000000000000000000361100000000000000000000000000000000000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................221258.0025800000000000000000000000000000000000000000000000000000000110000000000000000000000110460001002033010011390000000031000030000000000100000000000000000000000000000000000001510012001591110110100000003600000000000000000000000000000000000000000000000200010000110100000200000000000000000000000000002135831220000000000000000000000000000110000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG........................................................................................................................201257.0025700000000000000000000000000000000000000000000000000000000000000000000000000000000200110000006001000002500000000000000120110301060620000000000000000000000000000000000004502001120723312620000010000000000000000000000000000000000000000000000000201600000500000002000000000000000000000000000061210300100000001011000000000000000024900000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCATC......................................................................................................................221254.002540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................211254.002540000000100000000000000000004040301000000000000000000000002000000000000000000000021015517000001001700002400000000004200110000015010220000000000202000000000000000000000006302134035007101000000000000000000000000000000000000000000000000000000850010000130100000000000000000000000000000000104526326000000000001000000000000000002101000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTAT..........................................................................................................................................................201191.0019100000000110000000000000000020000005000000000000000000000000000000000000000000000070342700001100250000031010010000213100000000000000040000000000000000000000000000000000000170222022104645000000000000000000000000000000000000000000000000000002500000001300000000000000000000000000000000000000203300000000000000000000000000000400000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCCC......................................................................................................................221183.001830000000000000000000000000000000000000000000000000000000000000000000000000000000080003600000060824000010100000000002001610000000012293000000000000000000000000000000000000320100000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droSim2
TATTACCGCAACTTCAG------------------------------------------TG------AGC-TTC--------------------------GACGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----GA----------T-ACACCGAAAGTGTT--TAA--------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................21120419.00204198302572275231156210221031358308731312
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................2019569.009569152620849150749905915028700010
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................2216139.00613990153448542630234601141611601315
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................2313611.00361110372622973170053023101000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................1912368.00236810000433221403140302202
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................1812061.002061910126201601110400001
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................231893.0089316315446023001012157802012
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201359.0035900023831800000900001
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................................................................221192.00192151153011100300800000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................211192.001923501210015000002100000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................211164.001641581010000000400000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................241140.0014058156102000002200000
....................................................................................................................................................................GGTATCCACTGTAGGCCT............................................................................................................................................................181137.0013712011000600000000000
..................................................................................................................................................................CTGGTATCCACTGTAGGCCT............................................................................................................................................................201109.001091081000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................23184.0084506300020306203000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................19182.0082000237700000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21179.0079000237000000200101
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................21168.00682120000000004500000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................24161.006110000140313260400000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGA......................................................................................................................................................24156.0056204800000000600000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18154.0054000025200000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................21152.00523127200000001000000
........................................................................................................................................................................TCCACTGTAGGCCTATATG.......................................................................................................................................................19150.0050480200000000000000
......................................................................................................................................................................TATCCACTGTAGGCCTATATG.......................................................................................................................................................21135.00352401100000000000000
.....................................................................................................................................................................GTATCCACTGTAGGCCTATATG.......................................................................................................................................................22132.00321401800000000000000
.................................................................................................................................................................CCTGGTATCCACTGTAGGCCT............................................................................................................................................................21126.0026230300000000000000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19124.0024000202100000100000
....................................................................................................................................................................GGTATCCACTGTAGGCCTAT..........................................................................................................................................................20123.002380500600000400000
.........................................................................................................................................................................CCACTGTAGGCCTATATG.......................................................................................................................................................18121.0021200100000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................24116.0016200100000001300000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGT......................................................................................................................................................24115.001540900100000100000
................................................................................................................................................................TCCTGGTATCCACTGTAGGCCT............................................................................................................................................................22113.001350800000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................22113.001320000001000226000
..................................................................................................................................................................CTGGTATCCACTGTAGGCCC............................................................................................................................................................20113.0013130000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................23113.001330000002100205000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA......................................................................................................................20112.0012000001200000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAA............................................................................................................................16111.001100000006410000000
....................................................................................................................................................................GGTATCCACTGTAGGCCC............................................................................................................................................................18111.0011110000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTA...........................................................................................................................................................19110.001030200400000100000
..................................................................................................................................................................CTGGTATCCACTGTAGGCCTAT..........................................................................................................................................................2219.00990000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................2319.00910000000000800000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATA.........................................................................................................................................................2219.00910201200000300000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................2318.00800000000000017000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATAT........................................................................................................................................................2318.00820202200000000000
.................................................................................................................................................................CCTGGTATCCACTGTAGGCCC............................................................................................................................................................2117.00770000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAC........................................................................................................................................................2217.00710600000000000000
.........................................................................................................................................................................................................GGCACGCGGTGAATGCCA.......................................................................................................................1817.00700000600001000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................2217.00700000000000700000
...................................................................................................................................................................TGGTATCCACTGTAGGCCT............................................................................................................................................................1916.00640000200000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGG......................................................................................................................................................2416.00600600000000000000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA....................................................................................................................2216.00600000500000100000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................2216.00600011200000200000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................2216.00620110000000200000
......................................................................................................................................................................................................TAAGGCACGCGGTGA.............................................................................................................................1516.00600000005010000000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.....................................................................................................................2115.00500010300000100000
.......................................................................................................................................................................ATCCACTGTAGGCCTATATG.......................................................................................................................................................2015.00520300000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................2015.00530000002000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATA.......................................................................................................................................................2315.00510200000000200000
......................................................................................................................................................................................................TAAGGCACGCGGTGAAT...........................................................................................................................1715.00500000001220000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATT.......................................................................................................................................................2314.00410100000000200000
...................................................................................................................................................................TGGTATCCACTGTAGGCC.............................................................................................................................................................1814.00420000200000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTT...........................................................................................................................................................1914.00440000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................1914.00400000003000001000
....................................................................................................................................................................GGTATCCACTGTAGGCCG............................................................................................................................................................1814.00440000000000000000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTAT..........................................................................................................................................................2114.00400000200110000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................2013.00310000000000101000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGC......................................................................................................................................................2413.00310200000000000000
..................................................................................................................................................................CTGGTATCCACTGTAGGCCG............................................................................................................................................................2013.00330000000000000000
..................................................................................................................................................................CTGGTATCCACTGTAGGCCTATA.........................................................................................................................................................2313.00330000000000000000
.....................................................................................................................................................................GTATCCACTGTAGGCCTATA.........................................................................................................................................................2013.00300300000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATTT.........................................................................................................................1922.50500000001010003000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................1912.00200000002000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAG........................................................................................................................................................2212.00200200000000000000
...................................................................................................................................................................TGGTATCCACTGTAGGCCC............................................................................................................................................................1912.00220000000000000000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATAA......................................................................................................................................................2412.00200200000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATTA.........................................................................................................................1912.00200000000000002000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATGT......................................................................................................................................................2512.00200000100000001000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGAGCG.................................................................................................................2512.00200000200000000000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCC........................................................................................................................1812.00200000200000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT....................................................................................................................2412.00200000001000001000
..............................................................................................................................................................TCTCCTGGTATCCACTGTAGGCC.............................................................................................................................................................2312.00200200000000000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA....................................................................................................................2312.00200000200000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGG.........................................................................................................................1911.00110000000000000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA.....................................................................................................................2311.00100000000000100000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA......................................................................................................................................................2511.00100000000000100000
................................................................................................................................................................TCCTGGTATCCACTGTAGGCCC............................................................................................................................................................2211.00100100000000000000
droSec2
TATTACCGCAACTTCAG------------------------------------------TG------AGC-TTC--------------------------GTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----GA----------T-AGACAGAAATAATA--GACAAA-TTT------CAAATAATA---------AAG-AAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................21199797.0099797138821622742468823
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20144949.00449493001282126442103
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................19119485.00194855820610819113
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................22111729.001172911510689592549
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2315283.00528313012222962735
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................2111002.00100214199960
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231463.0046396237211
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................231461.0046113339946
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181380.00380823367
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................241291.0029141342232
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201283.00283136333111
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................241225.002252653164
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................241212.002124413371
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................201196.00196155185
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................231135.00135314883
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211134.00134333791
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................211133.00133014092
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................221114.0011491599
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................191111.00111090102
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................19188.0088200068
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................19165.006516058
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................21155.0055003124
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................20154.005412051
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19145.0045901125
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................22136.0036801216
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18134.003460028
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23133.003313029
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.....................................................................................................................21132.003220525
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATA.........................................................................................................................................................22129.0029011414
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................22128.002810819
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................23127.0027101511
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21124.002414055
........................................................................................................................................................................................................AGGCACGCGGTGAATGCC........................................................................................................................18120.002000020
......................................................................................................................................................................................................TAAGGCACGCGGTGAATT..........................................................................................................................18120.002000020
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................................................................22119.001910153
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22119.00190199
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT....................................................................................................................22119.001900514
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATAT........................................................................................................................................................23115.00150087
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC....................................................................................................................24115.001500312
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG........................................................................................................................20111.00110119
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA....................................................................................................................22111.00110038
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGA......................................................................................................................................................24110.001000100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT....................................................................................................................2418.0080224
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT...................................................................................................................2518.0080008
...................................................................................................................................................................TGGTATCCACTGTAGGCCTAT..........................................................................................................................................................2118.0081052
....................................................................................................................................................................GGTATCCACTGTAGGCCTAT..........................................................................................................................................................2018.0080062
..................................................................................................................................................................CTGGTATCCACTGTAGGCCTATA.........................................................................................................................................................2317.0070106
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA.....................................................................................................................2317.0070007
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA......................................................................................................................2016.0060006
...................................................................................................................................................................TGGTATCCACTGTAGGCCTA...........................................................................................................................................................2016.0060015
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG....................................................................................................................2415.0051004
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGTT........................................................................................................................2015.0050005
droYak3
TATTTCCTAAACTTCAG------------------------------------------TG------AGT-TTC--------------------------GTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................211142288.0014228815938099452392640696835516901220
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20140745.0040745258518535631811212227872950010
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................22114074.00140741424258223893124928073033110
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2314473.004473914317155996231365181000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................1914095.0040951377240212662463340000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................2112757.002757202433416228200000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................2111903.0019031716226433140720000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................2311797.0017976938820245151600000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231830.008302144381068318410020
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201568.0056803693933212410000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211566.0056673101110443100000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................231267.00267051468386910000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................221215.002150462202310500100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................241189.0018916522329600000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................231168.0016800129492510000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181163.0016323634610120000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................241157.0015711677255510000
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................241150.0015017480318910000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................221139.00139011114397310000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................211106.0010614072200000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................201100.0010001111226410000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................19198.0098046121102900000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................20175.00750130244700000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................................................................22159.005915027170000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21158.00580202072900000
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................19153.00530234061910000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22149.0049032593000000
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................22139.00392129331000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23123.0023013081100000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACA.....................................................................................................................23121.0021002321400000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG........................................................................................................................20121.0021000051600000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC....................................................................................................................24118.0018001402200000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................19118.0018010071000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT.......................................................................................................................21118.0018001001700000
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATGT......................................................................................................................................................24117.001761820000000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.......................................................................................................................21117.0017000141200000
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................19115.0015000031200000
droEre2
TATTTCCGCAGCTTCAG------------------------------------------TG------AGT-TTC--------------------------GTCGTTA---TGCA--ATGA-GTAAAGCCCAAGTGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACC-------CAAT----GA----------T-AGACCAAAAGTGTT--TGAAGG-CCCTAAAAC-------------TTCAATAACAAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.......................................................................................................................211303392.003033923542220183393243054892063370
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCC........................................................................................................................20175048.00750484671056107352141677608990
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGC.........................................................................................................................19112704.001270455432661191121480
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA......................................................................................................................22112519.00125195147613124125028565850
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.....................................................................................................................2315016.00501633431980521912432150
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.......................................................................................................................2111841.0018412115604602320
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.......................................................................................................................2111661.00166112152841810980
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.....................................................................................................................231810.00810294912338205510
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.......................................................................................................................201779.0077925711133353700
....................................................................................................................................................................GGTATCCACTGTAGGCCTATATG.......................................................................................................................................................231688.00688171325312263580
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCA........................................................................................................................201551.005510041055050
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.......................................................................................................................211494.00494192220742420
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA....................................................................................................................241313.00313912523122250
......................................................................................................................................................................................................TAAGGCACGCGGTGAATG..........................................................................................................................181210.00210100173111690
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.....................................................................................................................231210.0021061731231510
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT....................................................................................................................241199.0019971327651410
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCC........................................................................................................................191164.0016431114101170
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT......................................................................................................................221145.001451013441950
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCA.......................................................................................................................191132.001321812401880
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC......................................................................................................................221124.001242107280320
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.......................................................................................................................................................241122.00122687131870
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.....................................................................................................................23199.00990221021640
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA......................................................................................................................21170.0070432920140
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCT........................................................................................................................20159.0059011302430
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGA.........................................................................................................................19153.005300100520
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG......................................................................................................................22148.0048521621220
....................................................................................................................................................................GGTATCCACTGTAGGCCTATA.........................................................................................................................................................21143.004339080230
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.....................................................................................................................22140.0040181510150
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.......................................................................................................................21136.003600331020
........................................................................................................................................................................................................AGGCACGCGGTGAATGCC........................................................................................................................18129.002910300250
.......................................................................................................................................................................................................AAGGCACGCGGTGAATGC.........................................................................................................................18125.002500100240
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.....................................................................................................................23123.002310601150
....................................................................................................................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................................................................22122.002214160100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGT.........................................................................................................................19121.002100002190
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.....................................................................................................................21120.002020311130
...................................................................................................................................................................TGGTATCCACTGTAGGCCTATA.........................................................................................................................................................22116.001600020140
....................................................................................................................................................................GGTATCCACTGTAGGCCTAT..........................................................................................................................................................20115.00151212090
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT....................................................................................................................22114.001410201100
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCG........................................................................................................................20112.00120060150
......................................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC....................................................................................................................24112.00120301080
........................................................................................................................................................................................................AGGCACGCGGTGAATGCCAA......................................................................................................................20111.00111102070

Generated: 10/20/2015 at 10:22 PM