dps-mir-12

intron [Dpse\GA22886-in]; pre_miRNA [Dpse\mir-12-RM]; utr5 [utr5_plus_15222]; miRNA [Dpse\miR-12-RA]

CCAACTCCGCTAACCATTCGCGACGCGTTTCCAGGATCCAGCAGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGACCAAGCCAAAGCCAAAGACAAA ***************************************..(((((((((((((..(((((.((((.((((((((((((............)).)))))))))))))).)))))..))))))))..)).))).*************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M040 female body	M059 embryo	SRR902011 testis	GSM343916 embryo	V112 male body	GSM444067 head	M062 head	SRR902010 ovaries	M022 male body	SRR902012 CNS imaginal disc
........................................................TGAGTATTACATCAGGTACTGG................................................................................................	22	0	1	74199.00	74199	58586	3954	7231	793	602	439	1089	1351	73	81
........................................................TGAGTATTACATCAGGTACTGGT...............................................................................................	23	0	1	48802.00	48802	26954	6379	1775	6456	3142	3181	585	254	56	20
........................................................TGAGTATTACATCAGGTACTG.................................................................................................	21	0	1	19037.00	19037	15180	46	1976	214	707	536	35	147	193	3
........................................................TGAGTATTACATCAGGTACT..................................................................................................	20	0	1	9342.00	9342	8158	130	360	77	149	20	198	4	244	2
.........................................................GAGTATTACATCAGGTACTGG................................................................................................	21	0	1	6179.00	6179	5998	71	60	6	1	5	22	12	3	1
........................................................TGAGTATTACATCAGGTACTGGTT..............................................................................................	24	1	1	3371.00	3371	2295	224	318	142	186	112	41	33	18	2
.........................................................GAGTATTACATCAGGTACTGGT...............................................................................................	22	0	1	2705.00	2705	2572	34	15	51	12	10	1	6	4	0
........................................................TGAGTATTACATCAGGTACTGT................................................................................................	22	1	1	2606.00	2606	554	3	961	0	101	24	10	37	913	3
........................................................TTAGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	2044.00	2044	16	1871	0	4	4	2	147	0	0	0
........................................................TGAGTATTACATCAGGTACTGGC...............................................................................................	23	1	1	1927.00	1927	61	1679	7	19	6	12	140	0	3	0
........................................................TTAGTATTACATCAGGTACTGG................................................................................................	22	1	1	1486.00	1486	44	1145	4	0	0	0	293	0	0	0
.........................................................GAGTATTACATCAGGTACTG.................................................................................................	20	0	1	1438.00	1438	1416	0	14	1	0	1	0	1	5	0
........................................................TGAGTATTACATCAGGTACTGGTG..............................................................................................	24	0	1	860.00	860	264	234	242	72	3	7	11	12	5	10
........................................................TGAGTATTACATCAGGTAC...................................................................................................	19	0	1	607.00	607	397	83	7	2	4	9	29	1	75	0
.........................................................GAGTATTACATCAGGTACT..................................................................................................	19	0	1	548.00	548	543	1	0	1	0	0	1	1	1	0
.....................................CCAGCAGCGTCTGTACGGC......................................................................................................................	19	0	1	483.00	483	365	7	26	6	68	4	2	1	4	0
........................................................TTAGTATTACATCAGGTACTGGC...............................................................................................	23	2	1	465.00	465	0	423	0	0	0	0	42	0	0	0
........................................................TGAGTATTACATCAGGTACTGGA...............................................................................................	23	1	1	446.00	446	251	26	101	11	8	14	13	20	2	0
........................................................TGAGTATTACATCAGGTACTGGTA..............................................................................................	24	1	1	426.00	426	316	29	33	30	4	9	2	3	0	0
........................................................TGAGTATTACATCAGGTACTGGTTT.............................................................................................	25	1	1	296.00	296	204	4	49	5	19	7	2	4	1	1
..........................................................AGTATTACATCAGGTACTGG................................................................................................	20	0	1	287.00	287	284	1	1	0	0	1	0	0	0	0
....................................TCCAGCAGCGTCTGTACGGC......................................................................................................................	20	0	1	236.00	236	83	7	15	7	115	3	1	1	2	2
........................................................TGAGTATTACATCAGGTACTGTT...............................................................................................	23	1	1	224.00	224	81	1	71	9	12	17	1	5	27	0
.........................................................GAGTATTACATCAGGTACTGGTT..............................................................................................	23	1	1	189.00	189	187	0	1	1	0	0	0	0	0	0
..................................................................................................CAGTACTTATGTTATACTACGC......................................................	22	0	1	172.00	172	60	90	10	5	0	0	5	2	0	0
......................................CAGCAGCGTCTGTACGGC......................................................................................................................	18	0	1	167.00	167	79	2	4	2	9	1	4	0	63	3
..........................................................AGTATTACATCAGGTACTGGT...............................................................................................	21	0	1	138.00	138	136	0	1	0	0	1	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGC................................................................................................	22	1	1	136.00	136	4	62	3	2	0	1	7	0	57	0
.........................................................GAGTATTACATCAGGTACTGGTG..............................................................................................	23	0	1	131.00	131	102	19	5	0	0	0	3	0	1	1
.......................................................CTGAGTATTACATCAGGTACTGG................................................................................................	23	0	1	121.00	121	93	11	8	0	0	0	8	1	0	0
...................................ATCCAGCAGCGTCTGTACGGC......................................................................................................................	21	0	1	112.00	112	37	4	4	3	63	1	0	0	0	0
........................................................TTAGTATTACATCAGGTACT..................................................................................................	20	1	1	112.00	112	3	40	0	0	0	0	69	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTGT.............................................................................................	25	0	1	108.00	108	51	22	4	16	12	2	1	0	0	0
........................................................TGATTATTACATCAGGTACTGGT...............................................................................................	23	1	1	97.00	97	10	71	1	1	5	1	8	0	0	0
........................................................TGAGTATTACATCAGGGACTGGT...............................................................................................	23	1	1	96.00	96	3	23	0	52	1	15	1	0	0	1
........................................................TGAGTATTACATCAGGTACC..................................................................................................	20	1	1	91.00	91	5	33	0	0	0	0	49	0	4	0
........................................................TTAGTATTACATCAGGTACTGGTT..............................................................................................	24	2	1	87.00	87	2	61	0	0	0	0	24	0	0	0
........................................................TGAGTATTACATCAGGTACTGA................................................................................................	22	1	1	86.00	86	27	5	43	0	0	2	6	2	0	1
.............................................................ATTACATCAGGTACTGGT...............................................................................................	18	0	1	85.00	85	47	2	3	27	1	2	0	1	2	0
........................................................TGAGTATTACATCAGGTACTGGG...............................................................................................	23	1	1	84.00	84	37	20	0	22	0	2	1	0	2	0
........................................................TGAGTATTACATCAGGTACTGGTC..............................................................................................	24	1	1	82.00	82	19	40	0	10	3	3	6	0	1	0
........................................................TTAGTATTACATCAGGTACTGGTG..............................................................................................	24	1	1	80.00	80	0	78	0	0	0	0	2	0	0	0
........................................................TGAGTATTACATCAGGCACTGGT...............................................................................................	23	1	1	75.00	75	8	4	2	34	7	19	0	0	1	0
...........................................................GTATTACATCAGGTACTGG................................................................................................	19	0	1	71.00	71	63	3	4	0	0	0	0	0	1	0
..........................................................AGTATTACATCAGGTACTG.................................................................................................	19	0	1	71.00	71	71	0	0	0	0	0	0	0	0	0
........................................................TGATTATTACATCAGGTACTGG................................................................................................	22	1	1	71.00	71	29	30	1	0	0	0	10	1	0	0
.......................................................CTGAGTATTACATCAGGTACTGGT...............................................................................................	24	0	1	70.00	70	54	8	1	4	0	2	1	0	0	0
........................................................TGAGTATTACCTCAGGTACTGGT...............................................................................................	23	1	1	67.00	67	0	38	0	16	3	4	6	0	0	0
............................................................TATTACATCAGGTACTGG................................................................................................	18	0	1	63.00	63	59	1	1	1	1	0	0	0	0	0
.......................................................TTGAGTATTACATCAGGTACTGG................................................................................................	23	1	1	62.00	62	56	2	4	0	0	0	0	0	0	0
........................................................TGAGCATTACATCAGGTACTGGT...............................................................................................	23	1	1	60.00	60	16	12	1	17	7	5	2	0	0	0
.........................................................GAGTATTACATCAGGTACTGT................................................................................................	21	1	1	60.00	60	51	0	3	0	0	0	0	0	6	0
........................................................TGAGTATTACATCAGGAACTGG................................................................................................	22	1	1	56.00	56	21	2	23	0	0	4	2	3	0	1
........................................................TGAGAATTACATCAGGTACTGGT...............................................................................................	23	1	1	56.00	56	8	14	4	23	0	5	2	0	0	0
........................................................TGAGTATTACATCAGGTACTGAC...............................................................................................	23	2	1	51.00	51	0	50	1	0	0	0	0	0	0	0
........................................................TGAGTATTACCTCAGGTACTGG................................................................................................	22	1	1	50.00	50	2	33	2	1	0	1	11	0	0	0
........................................................TGAGGATTACATCAGGTACTGGT...............................................................................................	23	1	1	50.00	50	5	5	0	29	0	11	0	0	0	0
...........................................................GTATTACATCAGGTACTGGT...............................................................................................	20	0	1	50.00	50	46	2	0	1	0	1	0	0	0	0
........................................................TGAGTATTACATCAGTTACTGG................................................................................................	22	1	1	50.00	50	32	10	4	0	1	1	2	0	0	0
........................................................TGAGTATTACATCGGGTACTGGT...............................................................................................	23	1	1	49.00	49	23	6	1	12	4	3	0	0	0	0
........................................................TGAGAATTACATCAGGTACTGG................................................................................................	22	1	1	49.00	49	13	15	10	2	2	1	2	4	0	0
........................................................TGGGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	49.00	49	14	4	3	16	6	6	0	0	0	0
.......................................................GTGAGTATTACATCAGGTACTGG................................................................................................	23	1	1	48.00	48	48	0	0	0	0	0	0	0	0	0
........................................................CGAGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	48.00	48	11	15	4	12	2	3	1	0	0	0
.......................................................ATGAGTATTACATCAGGTACTGG................................................................................................	23	1	1	47.00	47	42	0	5	0	0	0	0	0	0	0
........................................................CGAGTATTACATCAGGTACTGG................................................................................................	22	1	1	45.00	45	26	7	3	2	1	0	5	1	0	0
............................................................TATTACATCAGGTACTGGT...............................................................................................	19	0	1	45.00	45	34	3	0	3	4	1	0	0	0	0
........................................................TAAGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	44.00	44	5	29	0	4	1	1	4	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTTTT............................................................................................	26	2	1	44.00	44	22	0	14	0	3	1	4	0	0	0
........................................................TGAGCATTACATCAGGTACTGG................................................................................................	22	1	1	44.00	44	33	5	2	2	0	0	2	0	0	0
........................................................TCAGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	43.00	43	7	31	1	0	2	0	2	0	0	0
........................................................TGAGTATTACATCAGGTACTTGT...............................................................................................	23	1	1	43.00	43	4	8	0	23	0	7	1	0	0	0
........................................................TGAGTATTACATCGGGTACTGG................................................................................................	22	1	1	42.00	42	32	4	1	1	1	0	2	1	0	0
........................................................TGAGTATTACATCAGGGACTGG................................................................................................	22	1	1	41.00	41	12	16	5	1	0	1	5	1	0	0
........................................................TGAGTATTACACCAGGTACTGG................................................................................................	22	1	1	40.00	40	29	6	2	1	0	0	2	0	0	0
........................................................TGCGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	40.00	40	0	23	0	6	2	6	3	0	0	0
........................................................TGAGTATTACATAAGGTACTGGT...............................................................................................	23	1	1	38.00	38	1	22	1	9	0	3	2	0	0	0
........................................................TTAGTATTACATCAGGTAC...................................................................................................	19	1	1	38.00	38	0	26	0	0	0	0	12	0	0	0
........................................................TGAGTATTACATCAGTTACTGGT...............................................................................................	23	1	1	38.00	38	18	6	1	1	4	2	2	0	4	0
........................................................TGAGTATTACATCAGGTA....................................................................................................	18	0	1	38.00	38	19	1	4	2	10	1	1	0	0	0
........................................................TGAGTATTACATCAGGCACTGG................................................................................................	22	1	1	37.00	37	23	3	3	1	2	4	0	1	0	0
.........................................................GAGTATTACATCAGGTAC...................................................................................................	18	0	1	37.00	37	33	3	0	0	0	0	0	0	1	0
........................................................TGAGGATTACATCAGGTACTGG................................................................................................	22	1	1	36.00	36	14	9	7	5	0	0	1	0	0	0
........................................................TTAGTATTACATCAGGTACTG.................................................................................................	21	1	1	36.00	36	12	14	0	1	0	0	8	0	1	0
........................................................TGGGTATTACATCAGGTACTGG................................................................................................	22	1	1	35.00	35	29	3	1	1	0	1	0	0	0	0
........................................................TGAGTATTACACCAGGTACTGGT...............................................................................................	23	1	1	34.00	34	10	9	0	10	3	1	1	0	0	0
.........................................................GAGTATTACATCAGGTACTGGTA..............................................................................................	23	1	1	34.00	34	29	0	1	0	0	0	0	4	0	0
........................................................TGCGTATTACATCAGGTACTGG................................................................................................	22	1	1	34.00	34	3	20	0	0	0	3	8	0	0	0
........................................................TCAGTATTACATCAGGTACTGG................................................................................................	22	1	1	34.00	34	7	17	6	0	0	0	4	0	0	0
........................................................TGAGTATTACATCAGGTACCGG................................................................................................	22	1	1	33.00	33	22	6	2	2	0	0	1	0	0	0
........................................................TGAGTATTGCATCAGGTACTGG................................................................................................	22	1	1	33.00	33	28	2	0	2	1	0	0	0	0	0
.........................................................GAGTATTACATCAGGTACTGGA...............................................................................................	22	1	1	32.00	32	28	2	1	0	0	0	1	0	0	0
........................................................TGAGTATTACATTAGGTACTGGT...............................................................................................	23	1	1	32.00	32	5	4	0	17	2	1	1	2	0	0
.......................................................TTGAGTATTACATCAGGTACTGGT...............................................................................................	24	1	1	31.00	31	31	0	0	0	0	0	0	0	0	0
........................................................GGAGTATTACATCAGGTACTGG................................................................................................	22	1	1	30.00	30	18	10	0	0	0	0	2	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTAA.............................................................................................	25	2	1	30.00	30	18	2	4	0	0	2	0	4	0	0
........................................................TGAGTATTACATCAGGTACTGTTT..............................................................................................	24	2	1	30.00	30	14	0	13	0	1	0	0	1	1	0
........................................................TGAGTATTACATCAGGTACTGAT...............................................................................................	23	1	1	30.00	30	3	3	1	13	3	7	0	0	0	0
........................................................TGAGTATTACATCATGTACTGGT...............................................................................................	23	1	1	29.00	29	11	1	0	12	2	2	0	0	1	0
........................................................TGAGTATTACATCAGGTGCTGGT...............................................................................................	23	1	1	29.00	29	8	1	0	16	1	3	0	0	0	0
........................................................TGAGTGTTACATCAGGTACTGGT...............................................................................................	23	1	1	29.00	29	1	14	0	7	3	3	1	0	0	0
........................................................TGAGTATTACATCAGGTACCGGT...............................................................................................	23	1	1	28.00	28	12	5	0	6	5	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGGAA..............................................................................................	24	2	1	27.00	27	8	1	12	0	0	1	0	5	0	0
.......................................................ATGAGTATTACATCAGGTACTGGT...............................................................................................	24	1	1	27.00	27	23	0	4	0	0	0	0	0	0	0
........................................................TGAGTATTACATCATGTACTGG................................................................................................	22	1	1	26.00	26	23	1	1	1	0	0	0	0	0	0
........................................................TGAGTGTTACATCAGGTACTGG................................................................................................	22	1	1	26.00	26	11	13	1	0	1	0	0	0	0	0
.......................................................ATGAGTATTACATCAGGTACTG.................................................................................................	22	1	1	26.00	26	15	0	11	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTT.................................................................................................	21	1	1	26.00	26	21	0	5	0	0	0	0	0	0	0
........................................................TGAGTATTACGTCAGGTACTGGT...............................................................................................	23	1	1	26.00	26	7	1	0	14	3	1	0	0	0	0
........................................................TGAGTATTACGTCAGGTACTGG................................................................................................	22	1	1	25.00	25	19	3	0	2	0	1	0	0	0	0
........................................................TAAGTATTACATCAGGTACTGG................................................................................................	22	1	1	25.00	25	4	16	3	0	0	0	2	0	0	0
..................................................................................................CAGTACTTATGTTATACTACG.......................................................	21	0	1	25.00	25	19	1	2	2	0	0	1	0	0	0
........................................................TGAGTATTACATCAGGTTCTGGT...............................................................................................	23	1	1	24.00	24	1	6	0	13	0	4	0	0	0	0
........................................................TGAGTATTACATCAGGAACTGGT...............................................................................................	23	1	1	23.00	23	1	3	2	8	2	7	0	0	0	0
........................................................TGAGTATTACATCAGGTACTA.................................................................................................	21	1	1	23.00	23	7	0	12	0	0	0	0	4	0	0
.......................................................GTGAGTATTACATCAGGTACTGGT...............................................................................................	24	1	1	23.00	23	23	0	0	0	0	0	0	0	0	0
.................................................................................................CCAGTACTTATGTTATACTACG.......................................................	22	0	1	23.00	23	12	0	11	0	0	0	0	0	0	0
.........................................................GAGTATTACATCAGGTACTGGC...............................................................................................	22	1	1	22.00	22	11	10	0	0	0	0	1	0	0	0
........................................................TGAGTATTACATAAGGTACTGG................................................................................................	22	1	1	22.00	22	5	10	0	2	1	0	4	0	0	0
........................................................TGAGTATTACATCAGGTGCTGG................................................................................................	22	1	1	21.00	21	18	0	1	2	0	0	0	0	0	0
........................................................TGAGTATTACATCACGTACTGGT...............................................................................................	23	1	1	21.00	21	5	2	2	8	2	1	1	0	0	0
........................................................TGAGTACTACATCAGGTACTGG................................................................................................	22	1	1	21.00	21	18	0	1	1	0	1	0	0	0	0
........................................................TGAGTAGTACATCAGGTACTGGT...............................................................................................	23	1	1	21.00	21	1	5	0	11	0	4	0	0	0	0
..........................................................AGTATTACATCAGGTACT..................................................................................................	18	0	1	20.00	20	20	0	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGCT...............................................................................................	23	1	1	20.00	20	3	4	0	6	0	7	0	0	0	0
........................................................AGAGTATTACATCAGGTACTGG................................................................................................	22	1	1	20.00	20	12	3	1	0	0	1	1	1	1	0
........................................................TTAGTATTACATCAGGTACC..................................................................................................	20	2	1	20.00	20	0	8	0	0	0	0	12	0	0	0
........................................................TGAGTATTACATCCGGTACTGGT...............................................................................................	23	1	1	20.00	20	1	0	0	18	0	1	0	0	0	0
........................................................TGAGTATTACATCAGGTAATGGT...............................................................................................	23	1	1	20.00	20	0	0	0	14	2	4	0	0	0	0
.......................................................TTGAGTATTACATCAGGTACTG.................................................................................................	22	1	1	20.00	20	20	0	0	0	0	0	0	0	0	0
........................................................TTAGTATTACCTCAGGTACTGG................................................................................................	22	2	1	19.00	19	0	17	0	0	0	0	2	0	0	0
........................................................TGAGTATTACATTAGGTACTGG................................................................................................	22	1	1	19.00	19	13	2	2	1	0	1	0	0	0	0
.......................................................CTGAGTATTACATCAGGTACTG.................................................................................................	22	0	1	19.00	19	16	0	3	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTTG................................................................................................	22	1	1	19.00	19	4	4	0	7	0	1	2	1	0	0
........................................................TTAGTATTACATCAGGTACTGGTC..............................................................................................	24	2	1	19.00	19	0	16	0	0	0	0	3	0	0	0
........................................................TGAGTATTGCATCAGGTACTGGT...............................................................................................	23	1	1	19.00	19	14	1	0	1	2	1	0	0	0	0
........................................................TGAGTATCACATCAGGTACTGGT...............................................................................................	23	1	1	19.00	19	7	2	0	3	2	3	1	1	0	0
........................................................TGAGTACTACATCAGGTACTGGT...............................................................................................	23	1	1	18.00	18	7	1	0	7	0	3	0	0	0	0
........................................................TGAGTATTACATCAGGTATTGG................................................................................................	22	1	1	18.00	18	8	4	0	2	2	0	2	0	0	0
........................................................TGAGTATTACATCAGGTATTGGT...............................................................................................	23	1	1	18.00	18	3	5	2	3	3	2	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGTA...............................................................................................	23	2	1	18.00	18	5	0	12	0	0	1	0	0	0	0
........................................................TGAGTATTAAATCAGGTACTGGT...............................................................................................	23	1	1	18.00	18	1	0	0	10	2	5	0	0	0	0
........................................................GGAGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	18.00	18	6	9	0	2	0	0	1	0	0	0
........................................................TGAGTATTACATCTGGTACTGGT...............................................................................................	23	1	1	18.00	18	2	1	0	13	0	2	0	0	0	0
........................................................TGAGTATTACATCAGGTCCTGGT...............................................................................................	23	1	1	17.00	17	2	1	0	6	1	7	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGAA...............................................................................................	23	2	1	17.00	17	1	0	16	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGTTACTG.................................................................................................	21	1	1	17.00	17	5	0	0	0	2	4	0	0	6	0
...........................................................GTATTACATCAGGTACTG.................................................................................................	18	0	1	17.00	17	17	0	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGCACTG.................................................................................................	21	1	1	17.00	17	5	0	2	0	3	7	0	0	0	0
........................................................TGAGTATTATATCAGGTACTGGT...............................................................................................	23	1	1	17.00	17	3	6	0	6	0	1	1	0	0	0
..................................GATCCAGCAGCGTCTGTACGGC......................................................................................................................	22	0	1	17.00	17	13	0	0	0	4	0	0	0	0	0
........................................................TGAGTATTACATCAAGTACTGGT...............................................................................................	23	1	1	16.00	16	2	4	0	9	0	1	0	0	0	0
........................................................TTAGTATTACCTCAGGTACTGGT...............................................................................................	23	2	1	16.00	16	0	14	0	0	0	0	2	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTTA.............................................................................................	25	2	1	16.00	16	8	0	7	0	1	0	0	0	0	0
.......................................................GTGAGTATTACATCAGGTACTG.................................................................................................	22	1	1	16.00	16	16	0	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTAGT...............................................................................................	23	1	1	16.00	16	2	2	0	8	0	4	0	0	0	0
........................................................TTAGTATTACATCAGGTACTGC................................................................................................	22	2	1	16.00	16	0	15	0	0	0	0	1	0	0	0
........................................................TGATTATTACATCAGGTACTGGC...............................................................................................	23	2	1	16.00	16	0	15	0	0	0	0	1	0	0	0
........................................................TGACTATTACATCAGGTACTGGT...............................................................................................	23	1	1	16.00	16	4	1	0	3	1	5	1	1	0	0
.........................................................GAGTATTACATCAGGTACTGGTTT.............................................................................................	24	1	1	16.00	16	16	0	0	0	0	0	0	0	0	0
.........................................................GAGTATTACATCAGGTACTGGTGT.............................................................................................	24	0	1	15.00	15	12	2	0	0	0	1	0	0	0	0
.............................................................ATTACATCAGGTACTGGTT..............................................................................................	19	1	1	15.00	15	10	0	2	2	0	1	0	0	0	0
...............................................................................GTGCTTTAAATCCAACAAC............................................................................	19	0	1	15.00	15	6	9	0	0	0	0	0	0	0	0
..........................................................AGTATTACATCAGGTACTGGTG..............................................................................................	22	0	1	14.00	14	14	0	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGATACTGGT...............................................................................................	23	1	1	14.00	14	6	3	0	3	0	2	0	0	0	0
.......................................................TTGAGTATTACATCAGGTACT..................................................................................................	21	1	1	14.00	14	14	0	0	0	0	0	0	0	0	0
........................................................TGAGTATTACCTCAGGTACTGGC...............................................................................................	23	2	1	14.00	14	0	12	0	0	0	0	2	0	0	0
........................................................TGAGTATTACATCAGGAACTG.................................................................................................	21	1	1	14.00	14	9	0	3	0	2	0	0	0	0	0
........................................................TTATTATTACATCAGGTACTGGT...............................................................................................	23	2	1	14.00	14	0	13	0	0	0	0	1	0	0	0
........................................................TGAGTATTATATCAGGTACTGG................................................................................................	22	1	1	14.00	14	1	4	6	1	0	1	1	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTTTTT...........................................................................................	27	3	1	13.00	13	9	0	4	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGCTACTG.................................................................................................	21	1	1	13.00	13	6	0	0	1	0	0	0	0	6	0
........................................................TGAGTATCACATCAGGTACTGG................................................................................................	22	1	1	13.00	13	7	3	1	0	0	0	0	2	0	0
........................................................AGAGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	13.00	13	1	7	1	4	0	0	0	0	0	0
........................................................TTAGTATTACATCAGGTACTGAC...............................................................................................	23	3	1	13.00	13	0	13	0	0	0	0	0	0	0	0
........................................................TGGGTATTACATCAGGTACTG.................................................................................................	21	1	1	13.00	13	12	0	0	0	1	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTAG................................................................................................	22	1	1	13.00	13	8	0	0	3	0	2	0	0	0	0
........................................................TGAGTATTACATCAGGTACTCGT...............................................................................................	23	1	1	13.00	13	1	0	0	8	2	2	0	0	0	0
........................................................TGAATATTACATCAGGTACTGG................................................................................................	22	1	1	12.00	12	7	2	3	0	0	0	0	0	0	0
.......................................................CTGAGTATTACATCAGGTACT..................................................................................................	21	0	1	12.00	12	12	0	0	0	0	0	0	0	0	0
..........................................................AGTATTACATCAGGTACTGGTT..............................................................................................	22	1	1	12.00	12	12	0	0	0	0	0	0	0	0	0
........................................................TGAGTTTTACATCAGGTACTGGT...............................................................................................	23	1	1	12.00	12	2	5	0	4	0	0	0	1	0	0
........................................................TGAGAATTACATCAGGGACTGGT...............................................................................................	23	2	1	12.00	12	0	0	0	12	0	0	0	0	0	0
..............................CCAGGATCCAGCAGCGTCTGTACGGC......................................................................................................................	26	0	1	11.00	11	1	0	6	0	4	0	0	0	0	0
........................................................TTAGTATTACATCAGGTACTGGTA..............................................................................................	24	2	1	11.00	11	0	10	0	0	0	0	1	0	0	0
..................................................................................................CAGTACTTATGTCATACTACGC......................................................	22	1	1	11.00	11	5	5	0	1	0	0	0	0	0	0
.........................................................TAGTATTACATCAGGTACTGG................................................................................................	21	1	1	11.00	11	5	2	2	0	0	0	0	2	0	0
........................................................TGATTATTACATCAGGTACTG.................................................................................................	21	1	1	11.00	11	7	2	0	0	0	0	0	0	2	0
........................................................TGAGTATTACATCAGGTACTC.................................................................................................	21	1	1	11.00	11	9	1	0	0	0	0	0	0	1	0
........................................................TGAGTATTACATCAGGTACGGG................................................................................................	22	1	1	11.00	11	2	0	2	6	0	1	0	0	0	0
........................................................TGAGTATTACAGCAGGTACTGGT...............................................................................................	23	1	1	11.00	11	0	0	0	9	0	2	0	0	0	0
........................................................TGAGGATTACATCAGGTACTG.................................................................................................	21	1	1	11.00	11	4	0	3	1	0	1	0	1	1	0
........................................................CGAGTATTACATCAGGTACTG.................................................................................................	21	1	1	11.00	11	10	0	0	0	0	1	0	0	0	0
........................................................TTATTATTACATCAGGTACTGG................................................................................................	22	2	1	11.00	11	0	10	0	0	0	0	1	0	0	0
........................................................TGAGTATTACATCAGGTACTTT................................................................................................	22	2	1	11.00	11	10	1	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCTGGTACTGG................................................................................................	22	1	1	11.00	11	4	0	5	2	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGTAA..............................................................................................	24	3	1	10.00	10	1	0	9	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTGCTG.................................................................................................	21	1	1	10.00	10	9	0	0	1	0	0	0	0	0	0
........................................................TGAGTATTACATCGGGTACTG.................................................................................................	21	1	1	10.00	10	9	0	0	1	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACCG.................................................................................................	21	1	1	10.00	10	8	0	0	2	0	0	0	0	0	0
........................................................TGAGTATTGCATCAGGTACTG.................................................................................................	21	1	1	10.00	10	8	1	0	0	0	1	0	0	0	0
........................................................TGAGTATTACATCAGGGACTG.................................................................................................	21	1	1	10.00	10	4	0	3	2	0	0	0	1	0	0
...............................CAGGATCCAGCAGCGTCTGTACGGC......................................................................................................................	25	0	1	10.00	10	0	0	5	0	5	0	0	0	0	0
........................................................TGAGTATTACACCAGGTACTG.................................................................................................	21	1	1	10.00	10	8	0	0	0	1	1	0	0	0	0
.........................................................GGGTATTACATCAGGTACTGG................................................................................................	21	1	1	10.00	10	4	5	0	0	0	0	1	0	0	0
........................................................TGAGTATTACATCACGTACTGG................................................................................................	22	1	1	10.00	10	7	0	0	2	0	0	1	0	0	0
........................................................TGAGTATTACATCAGGTTCTGG................................................................................................	22	1	1	10.00	10	6	3	0	1	0	0	0	0	0	0
........................................................TGAATATTACATCAGGTACTGGT...............................................................................................	23	1	1	10.00	10	1	2	0	4	1	2	0	0	0	0
......................................................ATTGAGTATTACATCAGGTACTGG................................................................................................	24	2	1	9.00	9	9	0	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTAT.............................................................................................	25	1	1	9.00	9	8	0	0	0	1	0	0	0	0	0
........................................................ATAGTATTACATCAGGTACTGG................................................................................................	22	2	1	9.00	9	0	9	0	0	0	0	0	0	0	0
........................................................TGACTATTACATCAGGTACTGG................................................................................................	22	1	1	9.00	9	8	0	0	1	0	0	0	0	0	0
........................................................TGAGTATGACATCAGGTACTGGT...............................................................................................	23	1	1	9.00	9	1	1	0	2	0	5	0	0	0	0
........................................................GTAGTATTACATCAGGTACTGGT...............................................................................................	23	2	1	9.00	9	0	9	0	0	0	0	0	0	0	0
........................................................CTAGTATTACATCAGGTACTGGT...............................................................................................	23	2	1	9.00	9	0	9	0	0	0	0	0	0	0	0
.........................................................GAGTATTACATCAGGTACTGA................................................................................................	21	1	1	9.00	9	7	0	1	0	0	0	1	0	0	0
...........................................................GTATTACATCAGGTACTGGTT..............................................................................................	21	1	1	9.00	9	6	1	2	0	0	0	0	0	0	0
........................................................TGAGAATTACATCAGGTACTG.................................................................................................	21	1	1	9.00	9	4	1	1	2	0	0	0	0	1	0
........................................................TGAGTATTACTTCAGGTACTGGT...............................................................................................	23	1	1	9.00	9	4	0	0	2	1	2	0	0	0	0
........................................................TGAGTATTAAATCAGGTACTGG................................................................................................	22	1	1	9.00	9	5	0	1	2	0	0	0	1	0	0
.......................................................GTGAGTATTACATCAGGTACT..................................................................................................	21	1	1	9.00	9	9	0	0	0	0	0	0	0	0	0
........................................................TTCGTATTACATCAGGTACTGGT...............................................................................................	23	2	1	9.00	9	0	9	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTAGTGGT...............................................................................................	23	1	1	9.00	9	0	0	1	8	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTGC.............................................................................................	25	1	1	9.00	9	0	9	0	0	0	0	0	0	0	0
........................................................TTAGGATTACATCAGGTACTGGT...............................................................................................	23	2	1	9.00	9	0	8	0	1	0	0	0	0	0	0
........................................................TGATTATTACATCAGGTACT..................................................................................................	20	1	1	8.00	8	4	1	0	0	0	0	3	0	0	0
.......................................................ATGAGTATTACATCAGGTACT..................................................................................................	21	1	1	8.00	8	7	0	1	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGGACT..................................................................................................	20	1	1	8.00	8	4	0	0	0	0	0	2	0	2	0
........................................................TGAGTATTACATCAGGTACTGGAAA.............................................................................................	25	3	1	8.00	8	3	0	2	0	0	0	0	3	0	0
........................................................TGAGTATTACATCAGATACTGG................................................................................................	22	1	1	8.00	8	4	0	2	0	1	1	0	0	0	0
........................................................TGCGTATTACATCAGGTACT..................................................................................................	20	1	1	8.00	8	1	4	0	1	0	0	2	0	0	0
........................................................TGAGTATTACATCAGG......................................................................................................	16	0	1	8.00	8	0	0	8	0	0	0	0	0	0	0
..................................................................................................CGGTACTTATGTTATACTACGC......................................................	22	1	1	8.00	8	0	7	0	0	0	0	1	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTGA.............................................................................................	25	1	1	8.00	8	3	1	2	2	0	0	0	0	0	0
........................................................TGAGTATTACATCAGCTACTGGT...............................................................................................	23	1	1	8.00	8	1	2	0	2	1	2	0	0	0	0
........................................................TTAGTATTACCTCAGGTACTGGC...............................................................................................	23	3	1	8.00	8	0	8	0	0	0	0	0	0	0	0
........................................................TGCGTATTACATCAGGTACTGGC...............................................................................................	23	2	1	7.00	7	0	6	0	0	0	0	1	0	0	0
........................................................TGAGCATTACATCAGGTACTG.................................................................................................	21	1	1	7.00	7	5	0	0	0	0	2	0	0	0	0
.........................................................GGGTATTACATCAGGTACTGGT...............................................................................................	22	1	1	7.00	7	2	4	0	0	0	0	1	0	0	0
........................................................TGAGTATTACATCAGGTACTCG................................................................................................	22	1	1	7.00	7	2	0	2	2	0	1	0	0	0	0
........................................................TGAGTATTACATCATGTACTG.................................................................................................	21	1	1	7.00	7	6	0	0	0	0	1	0	0	0	0
........................................................GTAGTATTACATCAGGTACTGG................................................................................................	22	2	1	7.00	7	0	5	0	0	0	0	2	0	0	0
........................................................TGAGTATTACAACAGGTACTGG................................................................................................	22	1	1	7.00	7	3	2	1	0	0	0	1	0	0	0
........................................................TGAGAATTACATCAGGTACT..................................................................................................	20	1	1	7.00	7	3	0	2	0	0	0	1	0	1	0
........................................................TGAGTATAACATCAGGTACTGGT...............................................................................................	23	1	1	7.00	7	0	5	0	1	0	0	1	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTAAA............................................................................................	26	3	1	7.00	7	7	0	0	0	0	0	0	0	0	0
..................................................................................................CAGTACTTATGTTATACTACGCT.....................................................	23	1	1	7.00	7	3	3	0	1	0	0	0	0	0	0
........................................................TTCGTATTACATCAGGTACTGG................................................................................................	22	2	1	7.00	7	0	5	0	0	0	0	2	0	0	0
........................................................TGAGTGTTACATCAGGTACTG.................................................................................................	21	1	1	6.00	6	3	0	1	0	0	2	0	0	0	0
........................................................TGAGTATTACATCAGGGACTGGC...............................................................................................	23	2	1	6.00	6	0	4	0	1	0	1	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTTC.............................................................................................	25	2	1	6.00	6	2	0	2	0	1	0	1	0	0	0
........................................................TGAGTATTACATCAGGGACTGT................................................................................................	22	2	1	6.00	6	0	0	1	0	0	0	0	0	5	0
........................................................TGAGGATTACATCAGGTACTGT................................................................................................	22	2	1	6.00	6	0	0	1	0	0	0	0	0	5	0
........................................................TGAGTATTACGTCAGGTACTG.................................................................................................	21	1	1	6.00	6	4	0	1	0	0	1	0	0	0	0
........................................................TTAGTATTACATCAGGGACTGG................................................................................................	22	2	1	6.00	6	0	6	0	0	0	0	0	0	0	0
........................................................TTAGTATTACATCAGGTACTGGA...............................................................................................	23	2	1	6.00	6	0	4	0	0	0	0	2	0	0	0
.........................................................GAGTATTACATCAGGAACTGG................................................................................................	21	1	1	6.00	6	5	1	0	0	0	0	0	0	0	0
........................................................TGAGTATTCCATCAGGTACTGGT...............................................................................................	23	1	1	6.00	6	1	0	0	4	1	0	0	0	0	0
........................................................TGAGTATTACATCAGGTATT..................................................................................................	20	1	1	6.00	6	3	1	0	0	2	0	0	0	0	0
........................................................TGAGTATTACATGAGGTACTGG................................................................................................	22	1	1	6.00	6	3	0	2	1	0	0	0	0	0	0
........................................................TAAGTATTACATCAGGTACTGGC...............................................................................................	23	2	1	6.00	6	0	6	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTAATG.................................................................................................	21	1	1	6.00	6	1	0	0	3	1	1	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGAAA..............................................................................................	24	3	1	6.00	6	0	0	6	0	0	0	0	0	0	0
........................................................TTAGTATTACATCAGGGACTGGT...............................................................................................	23	2	1	6.00	6	0	6	0	0	0	0	0	0	0	0
........................................................TGAGTATTAGATCAGGTACTGGT...............................................................................................	23	1	1	6.00	6	2	0	0	3	0	1	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGGAT..............................................................................................	24	2	1	6.00	6	4	0	0	0	0	0	0	0	2	0
........................................................TAAGTATTACATCAGGTACTG.................................................................................................	21	1	1	6.00	6	4	0	1	0	0	1	0	0	0	0
........................................................TCAGTATTACATCAGGTACTGGC...............................................................................................	23	2	1	6.00	6	0	6	0	0	0	0	0	0	0	0
...................................................................................................AGTACTTATGTTATACTACGC......................................................	21	0	1	6.00	6	6	0	0	0	0	0	0	0	0	0
........................................................TGAGTACTACATCAGGTACTG.................................................................................................	21	1	1	6.00	6	4	0	0	0	1	1	0	0	0	0
........................................................TTAGTATTACATAAGGTACTGGT...............................................................................................	23	2	1	6.00	6	0	6	0	0	0	0	0	0	0	0
.............................TCCAGGATCCAGCAGCGTCTGTACGGC......................................................................................................................	27	0	1	6.00	6	1	0	3	1	1	0	0	0	0	0
........................................................TGAGTATTACATCAGGTTT...................................................................................................	19	2	3	5.33	16	14	0	1	0	1	0	0	0	0	0
........................................................TTAGTATTACATCAGGTACCGG................................................................................................	22	2	1	5.00	5	0	3	0	0	0	0	2	0	0	0
........................................................TGAGTATTACATCAGGAACT..................................................................................................	20	1	1	5.00	5	2	0	1	1	0	0	1	0	0	0
........................................................TGAGTATTACTTCAGGTACTGG................................................................................................	22	1	1	5.00	5	1	0	1	1	0	2	0	0	0	0
.........................................................GAGGATTACATCAGGTACTGG................................................................................................	21	1	1	5.00	5	3	1	0	0	0	0	1	0	0	0
........................................................GGAGTATTACATCAGGTACTG.................................................................................................	21	1	1	5.00	5	4	0	0	0	0	0	0	0	1	0
........................................................TGAGTATTACATCGGGTACT..................................................................................................	20	1	1	5.00	5	3	0	0	0	1	1	0	0	0	0
........................................................TGAGTATTACATCAGGTATTG.................................................................................................	21	1	1	5.00	5	2	0	0	1	1	1	0	0	0	0
........................................................TTAGTATTACACCAGGTACTGGT...............................................................................................	23	2	1	5.00	5	0	4	0	0	0	0	1	0	0	0
........................................................TGAGGATTACATCAGGTACT..................................................................................................	20	1	1	5.00	5	4	0	0	1	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACGGGT...............................................................................................	23	1	1	5.00	5	0	1	1	1	0	2	0	0	0	0
........................................................TGTGTATTACATCAGGTACTGG................................................................................................	22	1	1	5.00	5	4	0	1	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGGTGTTT...........................................................................................	27	2	1	5.00	5	3	0	0	0	1	1	0	0	0	0
.........................................................GAGTATTACATCAGTTACTGG................................................................................................	21	1	1	5.00	5	5	0	0	0	0	0	0	0	0	0
........................................................TGGGTATTACATCAGGTACT..................................................................................................	20	1	1	5.00	5	4	0	0	1	0	0	0	0	0	0
........................................................TGAGTATTACATCAGTTACTGGTT..............................................................................................	24	2	1	5.00	5	4	0	0	0	0	0	1	0	0	0
........................................................TGAGTATTACATCAGGTACTGGCT..............................................................................................	24	2	1	5.00	5	3	0	0	0	1	1	0	0	0	0
........................................................TGAGTATTACATCAGGTCCTGG................................................................................................	22	1	1	5.00	5	0	0	2	2	1	0	0	0	0	0
.........................................................GAGTATTACATCATGTACTGG................................................................................................	21	1	1	5.00	5	4	0	0	1	0	0	0	0	0	0
........................................................TGAGGATTACATCAGGGACTGGT...............................................................................................	23	2	1	5.00	5	0	0	0	2	0	3	0	0	0	0
........................................................TGAGTATTACATCAGGCACT..................................................................................................	20	1	1	5.00	5	4	0	0	0	0	1	0	0	0	0
........................................................TGTGTATTACATCAGGTACTGGT...............................................................................................	23	1	1	5.00	5	1	0	0	3	0	1	0	0	0	0
........................................................TGAGTATTACAACAGGTACTGGT...............................................................................................	23	1	1	5.00	5	3	0	0	1	0	1	0	0	0	0
........................................................TTAGTATTACACCAGGTACTGG................................................................................................	22	2	1	5.00	5	0	5	0	0	0	0	0	0	0	0
........................................................TGAGTATTACATCAGGTACTGCC...............................................................................................	23	2	1	5.00	5	0	4	0	0	0	0	1	0	0	0
.......................................................TTGAGTATTACATCAGGTACTGGTT..............................................................................................	25	2	1	5.00	5	5	0	0	0	0	0	0	0	0	0
........................................................AGAGTATTACATCAGGTACTG.................................................................................................	21	1	1	5.00	5	4	0	0	0	0	1	0	0	0	0
........................................................TTAGTATTACATCAGTTACTGG................................................................................................	22	2	1	5.00	5	0	3	0	0	0	0	2	0	0	0
........................................................TGAGTATTACATCAAGTACTGG................................................................................................	22	1	1	5.00	5	3	0	1	1	0	0	0	0	0	0

GGTTGAGGCGATTGGTAAGCGCTGCGCAAAGGTCCTAGGTCGTCGCAGACATGCCGACTCATAATGTAGTCCATGACCACACGAAATTTAGGTTGTTGGTCATGAATACAATATGATGCGGCACGTGACTAGCGTGATTGGCGTACGGTTCTGGTTCGGTTTCGGTTTCTGTTT *************************************..(((((((((((((..(((((.((((.((((((((((((............)).)))))))))))))).)))))..))))))))..)).))).***************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M059 embryo	M040 female body	GSM343916 embryo	GSM444067 head
.................................................................................................GGTCATGACTACATTATGATT........................................................	21	3	1	1.00	1	1	0	0	0
.........................................................................TGACCACACGAAATTTAGGTTG...............................................................................	22	0	1	1.00	1	1	0	0	0
......................................................................CCATGACCACAGGAAATCT.....................................................................................	19	2	1	1.00	1	0	0	1	0
.......................................................CACTCATAATGTAGTCCATGACCACA.............................................................................................	26	1	1	1.00	1	0	1	0	0
.................................................................................................GGTCATGACTACATTATGAG.........................................................	20	3	6	0.17	1	0	1	0	0
..................................................................................................................................ACCGTGAGTGGCGGACGGTTC.......................	21	3	6	0.17	1	0	0	0	1

Species	Coordinate	ID	Type	Alignment
dp5	XL_group1a:977960-978133 +	dps-mir-12	Known_mirbase	CCAA-------------------C-TCCGCTAACCA----------------------TT--CGCGACG-------------CGTTTCCAG------------------------------GATCCAGC------AGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGA----CC-A------------------------AGC----CAAAGCCAAAGACAAA
droPer2	scaffold_26:1092601-1092769 +	dpe-mir-12	Known_mirbase	CCAA-------------------C-TCCGCTAACCA----------------------TT--CGCGACG-------------CGTTTCCAG------------------------------GATCCAGC------AGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGA----CC-A------------------------AGC----CAAAGCC-----AAAG
droWil2	scf2_1100000004515:1592703-1592891 -	dwi-mir-12	Known_mirbase	ACAA-------------------A-TCT------CA----------------------TT--GGAGAT-----------------TCTCTCGAGCGGCTCCATCGAACACAG---------CCGCTGGC------AGCGCCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACTGCATGTCCACA----CCAT-------------------------CCTGATCATCATCATCGTGAAC
droVir3	scaffold_12970:2049264-2049447 +	dvi-mir-12	Known_mirbase	CCAGCCGCATCAACATTAATAGCA-GCCGC-----------------------------------------------ATCAACA----GCC---------------------GCATCAGCATCCGCATC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC----T-T----T----------CA----------------AAAAT--GTTTATG
droMoj3	scaffold_6359:3259742-3259910 +	dmo-mir-12	Known_mirbase	CAAC-------------------A-ACAAC---------A------------------AC--AGCAAC----TG--CATCAGC-------------------------------------ATCAGCATC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCAATTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC----T-T------------------------AAA----CAAAAATATATAAAAA
droGri2	scaffold_14853:6951687-6951837 -	dgr-mir-12	Known_mirbase	CAGC-------------------A-TCAGC-----------------------------------------------ATCAGCA----TCC------------------------------GAAGCAGCATCACAAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACCAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC----T--------------------------------------------ACAAA
droAna3	scaffold_12929:2898532-2898666 -	dan-mir-12	Known_mirbase	----------------------------------------------------------------------------------------------------------------------------------------GCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCTC-------------------------CAAAAAAAAAAA----CAAAACAGAAAACTAA
droBip1	scf7180000396740:80320-80456 -			----------------------------------------------------------------------------------------------------------------------------------------GCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC--C-A-GATACCTCAAAATATATCCA----------------AA-------ACAGA
droKik1	scf7180000302696:761527-761679 +			CCGC-------------------C-ACAGCAGATCA----------------------GA--TCAGAGC-------------AGATCGGAG------------------------------GAGC--TC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGCCAAA----------------------------------------------------GCAA
droFic1	scf7180000454038:647484-647672 +			CCAT-------------------T-GG---------AGCAGTAGCACTTCAATCGGCCCT--CGGGAAG---TG--AAGGACCCAAT----------------CGAA---AG---------AAGAGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTAAAATCGAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC--C-A-GAA------------------------CC-CGAG------------AAAA
droEle1	scf7180000491023:1178525-1178694 -			AGC---------------------------TATCCAACGAGTAGGGAT--------CCCT--CGCGACG---TGAGAAGGAACAGC----------------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCCTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCAAA--------------------------------------------------ATACAAA
droRho1	scf7180000777097:73405-73553 -			TCAT-------------------C-GC------------------CAT--------CCCT--CGCGACG---TG--AAGGAGC-------------------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAACTTAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCA-------------------------------------------------------AAA
droBia1	scf7180000302041:37876-37995 +			ACAG-------------------C------------------------------------------------------------------------------------------------CCCAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCC-----------------------------------------------------------
droTak1	scf7180000414432:174037-174180 +			CCAA-------------------C-GC--------------------------------------G-----------AGGA--------A------------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAC-------------------------CA----------------AAAGA--AAAGAAA
droEug1	scf7180000409533:552713-552874 +			TAAA-------------------GGACAGCCATCCA----------------------TC----------------------CATCCATAC-----------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAAATAAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC--TTACC-A------------------------CG-CGCG------------CGCT
dm3	chrX:15403456-15403601 +	dme-mir-12	Known_mirbase	CCAT-------------------T-GC-----------------------------------CGCGACGCACTG--AAGGATCGTCTGTAC------------------------------GAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATG-------------------------------------------------------------
droSim2	x:14568734-14568894 +	dsi-mir-12	Known_mirbase	CCAT-------------------A-------------------GGGAACCA-------TTGCCGCGACGCACTG--AAGGATCGTCTGTAC------------------------------GATGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGAC--------------------------------------------------------CAA
droSec2	scaffold_73:137869-138029 +	dse-mir-12	Known_mirbase	CCAT-------------------A-------------------GGGAAACA-------TTGCCGCGACGCACTG--AAGGATCGTCTGTAC------------------------------GATGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGAC--------------------------------------------------------CAA
droYak3	3L:22017614-22017643 -			GCCA-------------------T-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAT-----------------------------------------AGT----CAAAGCCATAGCCAAA
droEre2	scaffold_4690:11630931-11631097 -	der-mir-12	Known_mirbase	AGCA-------------------G-TCCG-------ACGAGTAGGGCATCA-------TTCCCGCGACGCAGTG--AAGGATCGGCTGTAC------------------------------GAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAAACCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATG-------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

dp5

CCAA-------------------C-TCCGCTAACCA----------------------TT--CGCGACG-------------CGTTTCCAG------------------------------GATCCAGC------AGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGA----CC-A------------------------AGC----CAAAGCCAAAGACAAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	74199.00	74199	73	58586	3954	1089	793	439	602	1351	7231	81
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	48802.00	48802	56	26954	6379	585	6456	3181	3142	254	1775	20
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	19037.00	19037	193	15180	46	35	214	536	707	147	1976	3
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	9342.00	9342	244	8158	130	198	77	20	149	4	360	2
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	6179.00	6179	3	5998	71	22	6	5	1	12	60	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	3371.00	3371	18	2295	224	41	142	112	186	33	318	2
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	2705.00	2705	4	2572	34	1	51	10	12	6	15	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	2606.00	2606	913	554	3	10	0	24	101	37	961	3
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	1927.00	1927	3	61	1679	140	19	12	6	0	7	0
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	1438.00	1438	5	1416	0	0	1	1	0	1	14	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	860.00	860	5	264	234	11	72	7	3	12	242	10
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	607.00	607	75	397	83	29	2	9	4	1	7	0
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	548.00	548	1	543	1	1	1	0	0	1	0	0
............................................................................................................................CCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	19	1	483.00	483	4	365	7	2	6	4	68	1	26	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	446.00	446	2	251	26	13	11	14	8	20	101	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	426.00	426	0	316	29	2	30	9	4	3	33	0
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	287.00	287	0	284	1	0	0	1	0	0	1	0
...........................................................................................................................TCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	20	1	236.00	236	2	83	7	1	7	3	115	1	15	2
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	189.00	189	0	187	0	0	1	0	0	0	1	0
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGC.......................................................................................	22	1	172.00	172	0	60	90	5	5	0	0	2	10	0
.............................................................................................................................CAGC------AGCGTCTGTACGGC.......................................................................................................................................................	18	1	167.00	167	63	79	2	4	2	1	9	0	4	3
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	138.00	138	0	136	0	0	0	1	0	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	136.00	136	57	4	62	7	2	1	0	0	3	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG...............................................................................................................................	23	1	131.00	131	1	102	19	3	0	0	0	0	5	1
....................................................................................................................................................CTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	121.00	121	0	93	11	8	0	0	0	1	8	0
..........................................................................................................................ATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	21	1	112.00	112	0	37	4	0	3	1	63	0	4	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	108.00	108	0	51	22	1	16	2	12	0	4	0
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	91.00	91	4	5	33	49	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	86.00	86	0	27	5	6	0	2	0	2	43	1
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	85.00	85	2	47	2	0	27	2	1	1	3	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	84.00	84	2	37	20	1	22	2	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	82.00	82	1	19	40	6	10	3	3	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	71.00	71	1	63	3	0	0	0	0	0	4	0
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	71.00	71	0	71	0	0	0	0	0	0	0	0
....................................................................................................................................................CTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	70.00	70	0	54	8	1	4	2	0	0	1	0
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	63.00	63	0	59	1	0	1	0	1	0	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	60.00	60	6	51	0	0	0	0	0	0	3	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC................................................................................................................................	23	1	51.00	51	0	0	50	0	0	0	0	0	1	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	50.00	50	0	46	2	0	1	1	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	45.00	45	0	34	3	0	3	1	4	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	38.00	38	0	19	1	1	2	1	10	0	4	0
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	37.00	37	1	33	3	0	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	34.00	34	0	29	0	0	0	0	0	4	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	32.00	32	0	28	2	1	0	0	0	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	30.00	30	0	18	2	0	0	2	0	4	4	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	27.00	27	0	8	1	0	0	1	0	5	12	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	26.00	26	0	21	0	0	0	0	0	0	5	0
...............................................................................................................................................................................................CAGTACTTATGTTATACTACG........................................................................................	21	1	25.00	25	0	19	1	1	2	0	0	0	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	23.00	23	0	7	0	0	0	0	0	4	12	0
..............................................................................................................................................................................................CCAGTACTTATGTTATACTACG........................................................................................	22	1	23.00	23	0	12	0	0	0	0	0	0	11	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGC................................................................................................................................	22	1	22.00	22	0	11	10	1	0	0	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACT...................................................................................................................................	18	1	20.00	20	0	20	0	0	0	0	0	0	0	0
....................................................................................................................................................CTGAGTATTACATCAGGTACTG..................................................................................................................................	22	1	19.00	19	0	16	0	0	0	0	0	0	3	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTA................................................................................................................................	23	1	18.00	18	0	5	0	0	0	1	0	0	12	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAA................................................................................................................................	23	1	17.00	17	0	1	0	0	0	0	0	0	16	0
........................................................................................................................................................GTATTACATCAGGTACTG..................................................................................................................................	18	1	17.00	17	0	17	0	0	0	0	0	0	0	0
.........................................................................................................................GATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	22	1	17.00	17	0	13	0	0	0	0	4	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	16.00	16	0	8	0	0	0	0	1	0	7	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTGT..............................................................................................................................	24	1	15.00	15	0	12	2	0	0	1	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	15.00	15	0	10	0	0	2	1	0	0	2	0
............................................................................................................................................................................GTGCTTTAAATCCAACAAC.............................................................................................................	19	1	15.00	15	0	6	9	0	0	0	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGTG...............................................................................................................................	22	1	14.00	14	0	14	0	0	0	0	0	0	0	0
....................................................................................................................................................CTGAGTATTACATCAGGTACT...................................................................................................................................	21	1	12.00	12	0	12	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT...............................................................................................................................	22	1	12.00	12	0	12	0	0	0	0	0	0	0	0
.......................................................................................CCAG------------------------------GATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	26	1	11.00	11	0	1	0	0	0	0	4	0	6	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	11.00	11	1	9	1	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	11.00	11	0	10	1	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTAA...............................................................................................................................	24	1	10.00	10	0	1	0	0	0	0	0	0	9	0
........................................................................................CAG------------------------------GATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	25	1	10.00	10	0	0	0	0	0	0	5	0	5	0
......................................................................................................................................................GAGTATTACATCAGGTACTGA.................................................................................................................................	21	1	9.00	9	0	7	0	1	0	0	0	0	1	0
........................................................................................................................................................GTATTACATCAGGTACTGGTT...............................................................................................................................	21	1	9.00	9	0	6	1	0	0	0	0	0	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGC..............................................................................................................................	25	1	9.00	9	0	0	9	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA..............................................................................................................................	25	1	8.00	8	0	3	0	0	0	0	0	3	2	0
.....................................................................................................................................................TGAGTATTACATCAGG.......................................................................................................................................	16	1	8.00	8	0	0	0	0	0	0	0	0	8	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA..............................................................................................................................	25	1	8.00	8	0	3	1	0	2	0	0	0	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	7.00	7	0	7	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGCT......................................................................................	23	1	7.00	7	0	3	3	0	1	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC..............................................................................................................................	25	1	6.00	6	0	2	0	1	0	0	1	0	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAAA...............................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	6	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	6.00	6	2	4	0	0	0	0	0	0	0	0
................................................................................................................................................................................................AGTACTTATGTTATACTACGC.......................................................................................	21	1	6.00	6	0	6	0	0	0	0	0	0	0	0
......................................................................................TCCAG------------------------------GATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	27	1	6.00	6	0	1	0	0	1	0	1	0	3	0
.....................................................................................................................................................TGAGTATTACATCAGGTTT....................................................................................................................................	19	3	5.33	16	0	14	0	0	0	0	1	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGTTT............................................................................................................................	27	1	5.00	5	0	3	0	0	0	1	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT...............................................................................................................................	24	1	5.00	5	0	3	0	0	0	1	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGCC................................................................................................................................	23	1	5.00	5	0	0	4	1	0	0	0	0	0	0

droPer2

CCAA-------------------C-TCCGCTAACCA----------------------TT--CGCGACG-------------CGTTTCCAG------------------------------GATCCAGC------AGCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCTTTAAATCCAACAACCAGTACTTATGTTATACTACGCCGTGCACTGATCGCACTAACCGCATGCCAAGA----CC-A------------------------AGC----CAAAGCC-----AAAG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	16404.00	16404	131	15541	190	169	98	275
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	14265.00	14265	487	8348	1386	1135	1300	1609
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	6059.00	6059	196	5211	53	152	133	314
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	1331.00	1331	6	1323	1	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	1289.00	1289	76	1095	24	9	19	66
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	695.00	695	3	667	13	3	5	4
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	658.00	658	8	490	34	40	26	60
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	454.00	454	1	452	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	366.00	366	105	198	1	6	19	37
............................................................................................................................CCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	19	1	347.00	347	1	21	0	2	27	296
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	178.00	178	125	13	36	0	2	2
...........................................................................................................................TCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	20	1	158.00	158	0	3	1	2	6	146
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	128.00	128	61	57	2	1	5	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	112.00	112	21	57	27	3	0	4
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	108.00	108	1	90	6	3	6	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	95.00	95	2	80	1	6	1	5
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	74.00	74	0	73	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	59.00	59	42	12	3	0	1	1
.............................................................................................................................CAGC------AGCGTCTGTACGGC.......................................................................................................................................................	18	1	56.00	56	26	14	0	0	13	3
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	56.00	56	24	16	3	6	6	1
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	51.00	51	0	51	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	33.00	33	0	32	0	1	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	31.00	31	0	30	0	1	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	29.00	29	6	9	8	0	2	4
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	27.00	27	0	26	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	25.00	25	0	6	6	2	3	8
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	25.00	25	3	19	3	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	23.00	23	4	17	1	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	23.00	23	8	13	0	1	1	0
.........................................................................................................................GATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	22	1	21.00	21	0	2	0	0	0	19
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	21.00	21	0	21	0	0	0	0
..........................................................................................................................ATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	21	1	21.00	21	0	2	2	0	1	16
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	20.00	20	1	19	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	17.00	17	0	6	10	1	0	0
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGC.......................................................................................	22	1	16.00	16	1	13	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	16.00	16	2	3	3	0	2	6
....................................................................................................................................................CTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	16.00	16	0	16	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	14.00	14	0	12	1	0	1	0
....................................................................................................................................................CTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	14.00	14	0	10	0	2	2	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG...............................................................................................................................	23	1	14.00	14	0	14	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGG................................................................................................................................	18	1	13.00	13	12	0	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	11.00	11	0	9	0	0	1	1
....................................................................................................................................................CTGAGTATTACATCAGGTACTG..................................................................................................................................	22	1	11.00	11	0	11	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	8.00	8	0	2	1	0	0	5
.........................................................................................................................................................TATTACATCAGGTACTGT.................................................................................................................................	18	1	8.00	8	7	1	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	7.00	7	0	6	1	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTTATACTACG........................................................................................	21	1	7.00	7	0	7	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGA................................................................................................................................	18	1	7.00	7	6	0	1	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	6.00	6	0	6	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGC................................................................................................................................	18	1	5.00	5	5	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT...............................................................................................................................	24	1	5.00	5	2	2	0	0	1	0
........................................................................................................................................................GTATTACATCAGGTACTG..................................................................................................................................	18	1	5.00	5	0	4	0	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	5.00	5	0	5	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	3.00	3	0	3	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGG................................................................................................................................	22	1	3.00	3	1	2	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTAA..............................................................................................................................	24	1	3.00	3	0	3	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA..............................................................................................................................	25	1	3.00	3	0	3	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	3.00	3	0	2	0	1	0	0
......................................................................................TCCAG------------------------------GATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	27	1	3.00	3	0	0	0	0	0	3
........................................................................................................................................................GTATTACATCAGGTACTGT.................................................................................................................................	19	1	3.00	3	2	1	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT...............................................................................................................................	22	1	3.00	3	0	3	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	3.00	3	0	2	0	0	0	1
...............................................................................................................................................................................................CAGTACTTATGTTATACTACGCA......................................................................................	23	1	3.00	3	0	2	1	0	0	0
....................................................................................................................................................CTGAGTATTACATCAGGTACT...................................................................................................................................	21	1	3.00	3	0	3	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGTGCT...........................................................................................................................	28	1	2.00	2	0	0	1	0	0	1
............................................................................................................................................................................GTGCTTTAAATCCAACAAC.............................................................................................................	19	1	2.00	2	0	2	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGTT...............................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	2.00	2	0	1	0	0	1	0
.........................................................................................AG------------------------------GATCCAGC------AGCGTCTGTACGGC.......................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
.........................................................................................................................................................TATTACATCAGGTACTGGG................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................TTACATCAGGTACTGGTT...............................................................................................................................	18	1	2.00	2	1	1	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	2.00	2	0	2	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGC................................................................................................................................	22	1	2.00	2	0	1	0	1	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	2.00	2	1	0	1	0	0	0

droWil2

ACAA-------------------A-TCT------CA----------------------TT--GGAGAT-----------------TCTCTCGAGCGGCTCCATCGAACACAG---------CCGCTGGC------AGCGCCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACTGCATGTCCACA----CCAT-------------------------CCTGATCATCATCATCGTGAAC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	65841.00	65841	1055	24930	1554	36321	1981
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	32130.00	32130	454	27444	238	3351	643
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	10613.00	10613	797	7916	139	1518	243
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	4320.00	4320	510	3458	12	181	159
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	2201.00	2201	0	2196	0	5	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	1951.00	1951	2	1908	4	33	4
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	1292.00	1292	61	929	26	239	37
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	1232.00	1232	998	196	9	26	3
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	641.00	641	6	634	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	531.00	531	316	201	0	6	8
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	439.00	439	30	307	4	41	57
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	432.00	432	2	296	2	127	5
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	292.00	292	19	149	1	112	11
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	202.00	202	0	202	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	194.00	194	62	37	3	83	9
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	177.00	177	6	97	5	68	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	172.00	172	19	122	8	16	7
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC.......................................................................................	22	1	150.00	150	3	101	1	42	3
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	132.00	132	120	7	1	3	1
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	131.00	131	2	124	1	3	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	107.00	107	70	20	1	15	1
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	101.00	101	0	101	0	0	0
............................................................................................................................CTGGC------AGCGCCTGTACGGT.......................................................................................................................................................	19	1	88.00	88	0	25	11	50	2
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	84.00	84	0	49	26	8	1
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	78.00	78	0	78	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	66.00	66	0	59	1	6	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG........................................................................................	21	1	62.00	62	7	42	1	11	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCC..............................................................................................................................	25	1	61.00	61	2	55	0	0	4
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	55.00	55	0	20	3	30	2
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	48.00	48	0	39	3	5	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	37.00	37	1	14	1	20	1
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	37.00	37	1	34	0	1	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	36.00	36	1	30	0	3	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	33.00	33	5	20	1	6	1
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	28.00	28	4	24	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	24.00	24	0	24	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	24.00	24	0	24	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	24.00	24	0	23	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	20.00	20	18	1	0	0	1
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC...............................................................................................................................	23	1	20.00	20	0	20	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTG..................................................................................................................................	18	1	19.00	19	0	19	0	0	0
.............................................................................................................................TGGC------AGCGCCTGTACGGT.......................................................................................................................................................	18	1	19.00	19	0	7	1	11	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	17.00	17	0	17	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	17.00	17	0	17	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	16.00	16	0	14	0	2	0
...........................................................................................................................GCTGGC------AGCGCCTGTACGGT.......................................................................................................................................................	20	1	15.00	15	0	2	3	9	1
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT......................................................................................	23	1	15.00	15	1	9	0	4	1
..........................................................................................................................CGCTGGC------AGCGCCTGTACGGT.......................................................................................................................................................	21	1	14.00	14	0	6	8	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	13.00	13	0	3	0	10	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA......................................................................................	23	1	13.00	13	0	6	0	7	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC.........................................................................................	20	1	12.00	12	8	2	0	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCCC.............................................................................................................................	26	1	11.00	11	0	11	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA..............................................................................................................................	25	1	11.00	11	0	7	0	4	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGC.......................................................................................	21	1	11.00	11	0	10	0	1	0
.......................................................................................................................................................AGTATTACATCAGGTACT...................................................................................................................................	18	1	11.00	11	0	11	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG...............................................................................................................................	23	1	10.00	10	0	10	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	9.00	9	0	9	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	8.00	8	1	5	0	1	1
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	7.00	7	0	7	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACG...................................................................................................................................	20	1	7.00	7	7	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	7.00	7	0	5	0	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTA................................................................................................................................	23	1	6.00	6	0	6	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	6.00	6	0	5	0	1	0
................................................................................................................................................................................................AGTACTTATGTCATACTACG........................................................................................	20	1	6.00	6	0	6	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	6.00	6	0	4	2	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	5.00	5	5	0	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTG..................................................................................................................................	22	1	5.00	5	0	5	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT...............................................................................................................................	22	1	5.00	5	0	5	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT...............................................................................................................................	24	1	5.00	5	1	2	0	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCCT.............................................................................................................................	26	1	4.00	4	0	2	0	0	2
......................................................................................................................................................GAGTATTACATCAGGTACTGGTCC..............................................................................................................................	24	1	4.00	4	0	4	0	0	0
...................................................................................................................................................GTTGAGTATTACATCAGGTACTGG.................................................................................................................................	24	1	4.00	4	0	4	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACT...........................................................................................	18	1	4.00	4	3	1	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGTT...............................................................................................................................	21	1	3.00	3	0	3	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC................................................................................................................................	23	1	3.00	3	3	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAT.............................................................................................................................	26	1	3.00	3	0	1	0	2	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGC................................................................................................................................	22	1	3.00	3	0	3	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG..............................................................................................................................	25	1	3.00	3	0	3	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGC.................................................................................................................................	21	1	3.00	3	1	1	0	1	0
.........................................................................................................................................................TATTACATCAGGTACTGT.................................................................................................................................	18	1	3.00	3	3	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGA.................................................................................................................................	21	1	3.00	3	0	3	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGTT...............................................................................................................................	20	1	3.00	3	0	3	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	3.00	3	1	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC..............................................................................................................................	25	1	3.00	3	0	0	0	0	3

droVir3

CCAGCCGCATCAACATTAATAGCA-GCCGC-----------------------------------------------ATCAACA----GCC---------------------GCATCAGCATCCGCATC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC----T-T----T----------CA----------------AAAAT--GTTTATG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	679109.00	679109	368	216	23694	2711	9395	12808	5361	1495	296	3322	136	1	11	3	3544	2234	985	2999	2205	2011	16897	2272	5461	16647	15255	16619	31324	24064	69341	107320	40240	113454	108	25272	117	185	103	188	8021	33525	1	7	13	6	4	46	41	44	106	118	255	277	162	230	177	74	60	250	1536	1850	2148	6377	2428	7692	9555	16	14	18	8273	10353	6558	6099	8484	5500	20	18	30	26	35
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	302519.00	302519	549	253	100881	3641	578	1209	187	317	34	554	20	3	18	14	54	46	10	28	29	21	1764	26	955	1227	3530	4249	6298	5649	23188	42515	16172	38623	83	2182	104	156	90	142	300	3001	7	20	23	9	3	10	8	11	20	30	67	82	57	101	78	128	78	654	848	157	351	2117	97	6705	7435	208	179	87	4346	4818	4029	2332	4610	3693	59	44	64	104	150
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	153804.00	153804	725	267	11727	26	689	2719	380	204	16	318	9	0	1	3	921	787	307	785	736	444	2779	941	1248	1658	2631	2055	5527	4089	14589	31440	10064	31349	108	5795	118	152	107	67	800	9464	0	0	0	0	0	1	0	0	0	1	1	5	2	0	1	5	4	21	8	22	275	565	0	297	796	3	7	1	1025	1112	848	691	1151	905	4	1	0	3	4
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	69437.00	69437	208	29	996	303	260	1175	154	1	0	202	1	0	0	1	70	111	11	30	39	86	2122	74	213	438	442	721	957	551	8919	18991	6120	17073	1	1147	6	1	0	0	145	3389	0	0	1	0	0	2	0	2	2	12	9	25	5	14	10	9	10	42	160	89	41	473	1111	128	137	0	0	0	270	259	340	175	645	478	0	0	1	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	21920.00	21920	16	16	747	69	84	310	80	34	2	35	0	0	0	0	200	143	87	278	137	163	545	189	403	149	272	314	623	478	2097	4766	1450	4916	6	772	9	11	8	7	112	973	1	0	0	0	0	0	0	2	2	0	6	5	3	4	3	2	3	12	45	34	75	105	31	134	210	2	1	0	161	181	116	63	138	79	0	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	19067.00	19067	444	232	7010	20	2	49	1	42	0	25	0	0	0	0	45	25	24	49	25	21	28	51	37	10	58	42	109	73	389	882	296	803	3	104	1	1	4	0	4	81	2	1	0	0	0	0	0	0	1	0	1	0	0	2	3	15	9	115	6	5	22	87	60	9	32	0	0	1	1377	1541	1088	801	1525	1373	0	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	12940.00	12940	205	115	412	29	1	11	2	3	0	0	0	0	0	0	6	14	4	7	4	4	15	12	15	0	13	12	16	12	87	368	119	245	1	43	0	1	1	0	1	30	1	1	4	2	2	17	10	17	25	43	80	82	39	73	57	14	12	77	274	0	7	7	2	0	5	2	0	0	2222	1968	1442	1245	2149	1253	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	9195.00	9195	1	0	8924	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	6	8	9	30	47	22	50	1	3	1	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	3	13	0	0	0	9	13	9	4	10	9	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	7583.00	7583	1026	553	328	1	9	130	13	9	0	21	0	0	0	0	7	16	10	16	12	8	176	13	34	26	23	19	30	16	217	887	186	543	0	274	0	0	1	3	21	290	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	8	4	4	14	77	0	19	35	2	0	0	399	572	456	222	491	352	0	1	2	0	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	4973.00	4973	4	4	251	18	18	38	10	3	0	1	0	0	0	4	39	22	5	27	8	23	65	18	46	25	93	101	167	133	681	763	310	941	88	88	47	105	76	81	26	93	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	1	0	1	6	8	11	7	18	69	101	11	3	1	61	51	42	30	62	54	2	0	3	1	5
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	3381.00	3381	26	15	372	31	8	51	9	6	1	2	0	0	0	0	5	8	3	6	14	6	35	2	17	29	24	32	46	23	221	413	132	362	1	57	6	4	4	7	6	55	5	3	3	3	1	1	4	2	3	1	0	2	1	3	1	6	4	47	27	1	12	66	1	37	30	8	4	1	227	202	158	130	186	145	3	2	2	5	5
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	2618.00	2618	2	0	2015	3	8	6	2	4	0	2	0	0	0	0	3	0	1	0	3	2	8	0	4	10	10	12	27	22	64	146	39	90	1	14	0	1	0	0	5	17	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	6	1	7	31	2	3	0	0	0	15	4	4	6	8	7	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC.......................................................................................	22	1	1918.00	1918	1	0	264	29	10	10	5	1	0	0	0	0	0	0	16	12	11	14	12	4	10	14	14	10	71	78	72	50	333	149	110	356	0	3	0	3	0	0	19	22	0	0	0	0	1	1	0	0	2	0	2	2	1	4	2	0	2	0	5	2	0	1	0	45	69	0	0	1	15	11	15	9	14	11	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	1584.00	1584	0	0	31	3	3	1	3	0	0	0	0	0	3	1	6	6	0	2	1	5	3	2	9	8	53	58	133	99	90	75	39	88	154	8	90	166	122	114	18	8	1	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	6	1	0	41	29	8	7	3	24	13	10	6	12	10	3	0	0	2	3
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	1580.00	1580	26	22	86	526	19	28	11	2	0	8	0	0	0	0	4	5	1	1	4	2	31	2	11	28	11	14	38	23	79	119	50	195	0	60	0	2	0	1	12	64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	15	18	0	8	25	0	0	0	1	5	2	3	2	5	0	0	0	0	0
............................................................................................................................GCATC------AGCGTCTGTACGGT.......................................................................................................................................................	19	1	1570.00	1570	216	28	22	1	6	24	11	221	19	122	14	0	0	0	0	2	0	1	0	1	25	1	2	6	3	5	3	2	41	67	39	86	0	34	0	0	0	0	7	15	0	0	0	0	0	0	0	0	0	0	0	1	2	0	2	1	0	0	0	4	8	47	0	0	0	0	0	0	117	133	47	58	57	68	0	0	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCA..............................................................................................................................	25	1	1441.00	1441	2	0	15	2	9	33	1	0	0	1	0	1	0	0	2	2	0	2	1	1	79	2	7	12	1	14	26	15	130	405	96	364	0	44	1	6	5	4	5	121	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	14	7	2	2	0	0	0	1	0	0	0	4	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	1415.00	1415	16	2	92	70	1	6	3	4	2	3	0	0	0	0	5	4	1	4	3	3	10	2	3	9	12	22	28	15	85	170	64	158	1	13	0	2	1	0	1	24	0	0	1	0	0	1	0	1	4	1	2	5	2	3	2	2	0	2	16	6	1	5	3	3	10	1	1	0	97	95	69	47	122	74	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	1084.00	1084	0	0	999	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	1	1	1	3	10	27	2	16	0	8	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	2	1	1	0	0	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	966.00	966	2	0	94	10	27	44	48	3	2	5	1	0	1	0	4	4	3	4	2	3	50	1	2	58	16	19	27	6	38	59	20	49	0	116	0	0	1	1	28	90	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	12	2	8	62	17	11	0	0	0	3	1	0	4	3	0	1	0	0	1	0
.............................................................................................................................CATC------AGCGTCTGTACGGT.......................................................................................................................................................	18	1	938.00	938	67	15	8	1	0	11	6	82	15	83	10	0	0	0	0	0	0	0	0	0	22	0	0	6	0	1	1	1	7	20	14	21	0	28	0	0	0	0	1	13	0	0	0	0	0	1	1	1	0	0	0	0	1	0	1	0	0	0	1	4	1	0	0	0	0	0	0	0	113	121	61	83	40	76	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCC..............................................................................................................................	25	1	872.00	872	18	1	35	6	1	4	0	0	0	3	0	0	0	0	0	0	0	0	0	2	29	0	1	0	0	1	1	1	117	208	117	295	0	14	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	2	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	819.00	819	0	1	22	0	6	24	3	7	0	5	0	0	0	0	2	4	5	5	2	3	45	4	6	29	18	10	31	13	72	127	49	104	0	60	0	0	1	1	5	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	15	0	38	64	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	735.00	735	0	0	3	0	3	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	2	0	0	0	38	38	117	51	6	6	1	4	78	0	82	91	80	41	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	42	8	10	5	1	7	1	0	0	0	2	2	0	0	2	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC..............................................................................................................................	25	1	554.00	554	0	0	2	0	1	6	0	0	0	0	0	0	0	0	0	1	0	0	2	1	15	1	1	0	1	3	4	4	88	167	46	162	0	12	0	0	0	0	0	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	522.00	522	0	0	522	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	468.00	468	0	0	434	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	2	9	2	5	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	450.00	450	43	39	31	9	2	5	4	1	0	2	0	0	0	0	0	1	1	1	0	0	6	0	3	5	0	2	1	3	10	11	11	48	0	14	0	0	0	0	5	19	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	2	5	5	0	28	28	0	0	2	22	15	22	10	12	17	0	0	0	0	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	439.00	439	0	0	11	1	1	26	0	0	0	0	0	0	2	0	3	1	1	1	0	4	4	5	3	11	11	9	13	6	50	67	14	59	6	21	3	10	27	9	4	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	2	8	10	5	1	0	0	0	0	2	1	4	1	0	2	2
...........................................................................................................................CGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	20	1	415.00	415	19	2	30	3	2	13	3	53	1	39	7	0	0	0	0	0	0	0	0	0	9	0	0	3	2	3	6	2	14	18	17	28	0	3	0	0	0	0	2	7	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	2	1	59	0	0	0	0	0	0	15	17	16	1	7	8	0	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	358.00	358	123	86	10	23	0	2	0	0	0	1	0	0	0	0	0	0	1	2	1	1	1	0	1	1	3	4	5	4	11	17	11	23	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	0	3	1	2	0	0	2	1	1	1	1	3	0	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	357.00	357	1	0	35	2	11	5	6	2	0	2	0	0	0	0	0	0	1	3	0	0	19	0	1	24	10	2	9	4	5	44	6	11	0	22	0	0	0	0	12	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	4	52	2	7	0	0	0	0	1	0	0	0	0	0	0	0	0	1
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG........................................................................................	21	1	333.00	333	2	1	37	2	3	2	0	0	0	0	0	0	0	0	7	6	2	7	6	3	0	7	4	3	10	9	15	10	42	34	17	41	0	3	1	0	0	0	5	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	9	0	0	0	8	5	4	4	8	9	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCCT.............................................................................................................................	26	1	299.00	299	3	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	1	16	0	1	0	0	0	1	0	52	61	32	106	0	8	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	4	0	1	0	0	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	297.00	297	1	0	148	1	4	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	5	0	0	0	1	0	1	0	2	23	3	3	0	6	0	0	0	0	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	76	1	3	1	0	2	0	0	0	0	0	0	1	0	1	2	1
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	279.00	279	1	0	112	0	4	5	0	1	0	0	0	0	0	0	0	0	1	3	3	1	5	0	2	4	0	1	5	2	16	61	7	22	0	4	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	1	0	0	0	0	0	1	3	0	1	0	0	0	0	0
..........................................................................................................................CCGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	21	1	249.00	249	13	1	6	0	1	5	4	17	8	20	0	0	0	0	0	0	0	0	1	0	5	1	1	5	3	3	3	8	11	16	17	53	0	5	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	8	0	0	0	0	0	0	9	4	2	4	6	1	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	226.00	226	1	0	187	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	11	2	3	0	3	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	2	1	0	1	0	0	1	0	0	0	0	0	0	1	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	214.00	214	1	0	60	1	2	3	1	0	0	1	0	0	0	0	2	0	0	1	0	0	4	0	2	5	4	5	3	7	11	43	5	7	0	9	0	0	0	0	3	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	206.00	206	1	0	31	3	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	1	0	5	1	2	3	3	2	25	30	13	33	1	6	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	6	0	5	4	2	2	1	4	0	1	3	6	3	1	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGTC...............................................................................................................................	19	1	196.00	196	0	0	3	1	1	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	2	1	1	0	1	9	12	6	8	0	4	0	0	0	0	3	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	110	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	184.00	184	0	0	36	0	1	2	1	0	0	0	0	0	0	0	3	6	1	1	3	0	26	4	5	1	0	0	3	2	6	22	6	24	0	13	0	0	0	0	2	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC...............................................................................................................................	23	1	179.00	179	0	0	74	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	5	9	3	13	0	2	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	63	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	163.00	163	0	0	157	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	150.00	150	0	0	4	0	0	2	0	0	0	0	0	0	0	0	1	0	0	1	0	0	4	2	2	2	1	0	6	7	8	26	11	25	2	10	4	4	1	3	2	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	1	2	0	1	2	1	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCG..............................................................................................................................	25	1	150.00	150	9	2	1	0	1	9	0	0	0	2	0	0	0	0	0	0	0	0	0	1	14	0	1	3	1	0	0	0	9	23	8	39	0	10	0	0	0	0	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................TCCGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	22	1	144.00	144	4	0	3	0	1	8	0	8	1	5	2	0	0	0	0	0	0	0	0	0	4	0	0	1	2	4	1	3	4	14	7	39	0	6	0	0	0	0	3	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	1	0	0	0	4	2	1	0	0	5	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	133.00	133	0	0	9	5	1	2	0	0	0	0	0	0	1	0	2	0	0	1	0	0	4	0	1	1	0	3	3	3	7	21	1	17	0	2	1	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	2	0	7	2	0	0	0	3	4	4	0	6	5	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA..............................................................................................................................	25	1	112.00	112	0	0	6	0	0	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	1	2	19	3	10	9	2	10	7	0	5	3	9	2	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	2	1	0	0	1	0	0	0	3	0	0	0	1
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT......................................................................................	23	1	110.00	110	0	0	13	1	2	0	1	0	0	0	0	0	0	0	2	1	0	1	1	0	3	1	0	2	2	3	6	4	16	4	5	14	0	2	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	1	5	0	0	6	2	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	104.00	104	0	1	8	0	1	2	1	0	0	0	0	0	0	0	0	0	0	2	1	0	15	1	3	5	0	1	1	3	3	13	3	20	0	1	0	0	1	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	2	0	0	0	0	0	0	2	0	3	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	93.00	93	0	0	75	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	2	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	92.00	92	2	0	18	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	32	0	2	0	0	0	0	1	5	5	2	7	0	6	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGTC...............................................................................................................................	20	1	86.00	86	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	2	0	0	0	0	2	10	0	1	0	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	85.00	85	8	9	6	0	0	2	0	0	0	0	0	0	0	0	0	1	1	1	0	1	4	0	1	0	0	0	0	0	3	13	3	7	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	2	5	0	9	2	0	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	74.00	74	0	0	55	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	5	0	5	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................ATCCGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	23	1	70.00	70	1	0	2	0	0	2	0	1	0	2	0	0	0	0	0	0	0	2	0	0	2	0	0	0	1	1	3	4	6	3	4	27	0	2	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC................................................................................................................................	23	1	69.00	69	4	5	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	1	1	0	1	0	6	11	5	8	0	3	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA......................................................................................	23	1	65.00	65	0	0	6	1	2	1	0	0	0	0	0	0	0	0	1	0	0	2	0	0	1	0	0	0	0	0	0	3	7	3	7	27	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	57.00	57	0	0	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	1	1	0	0	0	0	0	8	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	55.00	55	26	17	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGC.......................................................................................	21	1	54.00	54	0	0	32	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	2	7	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	52.00	52	0	0	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCC...............................................................................................................................	24	1	51.00	51	0	0	1	0	2	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	1	1	0	8	9	1	14	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG..............................................................................................................................	25	1	50.00	50	3	0	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	3	0	3	6	2	9	1	1	0	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0
............................................................................................................................................................................GTGCCATTTAACTAACAAC.............................................................................................................	19	1	46.00	46	0	0	27	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	3	0	4	3	0	0	0	0	1
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	46.00	46	0	0	40	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	1	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC.........................................................................................	20	1	44.00	44	1	2	3	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	2	0	2	1	1	3	0	2	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	5	7	1	3	1	0	0	0	0	0	0
...........................................................................................................................................................TTACATCAGGTACTGGTC...............................................................................................................................	18	1	43.00	43	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	1	0	0	0	2	1	0	3	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	20	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	41.00	41	0	0	4	3	0	1	1	0	0	2	0	0	0	0	0	1	0	0	0	0	2	0	0	0	2	0	1	0	2	6	1	2	0	8	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGTC...............................................................................................................................	21	1	41.00	41	0	0	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	1	1	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA..............................................................................................................................	25	1	39.00	39	0	0	1	0	0	2	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	1	0	0	0	0	2	1	1	7	1	12	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................GCATC------AGCGTCTGTACGGG.......................................................................................................................................................	19	1	37.00	37	33	2	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAG..............................................................................................................................	25	1	37.00	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	2	2	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	4	0	1	0	0	0	0	1	3	1	3	5
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	37.00	37	2	0	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	4	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	34.00	34	0	0	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT...............................................................................................................................	24	1	33.00	33	2	0	1	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	0	0	0	9	1	6	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................CATCCGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	24	1	32.00	32	0	0	1	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	2	1	13	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	32.00	32	0	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTAA.............................................................................................................................	26	1	31.00	31	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	4	2	0	1	5	0	0	3	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	1	0	3	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTAA....................................................................................................................................	19	1	30.00	30	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	3	4	1	4	0	1	0	1	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................GCATC------AGCGTCTGTACGGC.......................................................................................................................................................	19	1	30.00	30	23	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CAAC-------------------A-ACAAC---------A------------------AC--AGCAAC----TG--CATCAGC-------------------------------------ATCAGCATC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCAATTAACTAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC----T-T------------------------AAA----CAAAAATATATAAAAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	150171.00	150171	53249	7764	1149	1863	69658	16488
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	146588.00	146588	122372	329	108	255	19757	3767
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	20626.00	20626	18783	50	210	276	116	1191
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	15187.00	15187	149	10	5	8	14982	33
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	10493.00	10493	10445	2	0	0	45	1
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	4756.00	4756	4332	16	21	36	151	200
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	4571.00	4571	4436	11	3	1	110	10
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	4036.00	4036	699	63	30	47	584	2613
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	3212.00	3212	1721	107	20	35	1020	309
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC.......................................................................................	22	1	2025.00	2025	156	29	1	2	1830	7
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	1584.00	1584	1583	0	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	1110.00	1110	135	25	0	1	947	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	1063.00	1063	601	40	2	8	367	45
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	978.00	978	735	5	8	13	85	132
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	939.00	939	471	2	8	13	423	22
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	674.00	674	461	1	11	15	17	169
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	456.00	456	453	0	0	1	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	339.00	339	124	0	3	2	155	55
............................................................................................................................GCATC------AGCGTCTGTACGGT.......................................................................................................................................................	19	1	319.00	319	28	5	4	8	17	257
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	299.00	299	60	22	4	4	200	9
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	263.00	263	262	0	0	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC................................................................................................................................	23	1	230.00	230	1	0	0	0	229	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	215.00	215	199	0	0	0	14	2
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	211.00	211	79	10	5	9	91	17
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	155.00	155	140	0	0	0	12	3
............................................................................................................................................................................GTGCCAATTAACTAACAAC.............................................................................................................	19	1	148.00	148	11	1	0	0	136	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	146.00	146	103	0	1	2	25	15
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	144.00	144	94	2	0	1	27	20
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	142.00	142	122	0	0	2	18	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	130.00	130	127	0	0	0	3	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	122.00	122	122	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT......................................................................................	23	1	121.00	121	19	5	1	0	92	4
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	93.00	93	52	0	0	0	37	4
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG........................................................................................	21	1	88.00	88	34	13	0	0	40	1
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	84.00	84	84	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	78.00	78	59	1	0	2	13	3
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	78.00	78	45	1	0	5	0	27
...........................................................................................................................AGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	20	1	76.00	76	3	3	0	0	6	64
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC...............................................................................................................................	23	1	56.00	56	56	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	55.00	55	55	0	0	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	54.00	54	53	0	0	0	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	51.00	51	50	0	0	0	1	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCC......................................................................................	23	1	44.00	44	1	0	0	0	43	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	43.00	43	6	5	1	0	21	10
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	42.00	42	2	0	0	0	40	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGC................................................................................................................................	22	1	42.00	42	9	0	0	0	33	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC..............................................................................................................................	25	1	40.00	40	14	0	0	2	4	20
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	39.00	39	26	0	0	1	3	9
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	38.00	38	38	0	0	0	0	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGC.......................................................................................	21	1	38.00	38	18	2	0	0	18	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	38.00	38	27	0	2	0	9	0
..........................................................................................................................CAGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	21	1	36.00	36	8	1	1	1	2	23
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	35.00	35	35	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTCA..............................................................................................................................	25	1	33.00	33	8	0	0	0	0	25
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC.........................................................................................	20	1	31.00	31	1	2	0	0	28	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	30.00	30	28	0	0	1	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG...............................................................................................................................	23	1	28.00	28	19	0	0	0	9	0
..........................................................................................................................................................ATTACATCAGGTACTGGC................................................................................................................................	18	1	27.00	27	0	0	0	0	27	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	26.00	26	26	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTG..................................................................................................................................	18	1	21.00	21	21	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	21.00	21	15	2	0	1	3	0
.........................................................................................................................TCAGCATC------AGCGTCTGTACGGT.......................................................................................................................................................	22	1	19.00	19	2	1	2	1	2	11
.............................................................................................................................CATC------AGCGTCTGTACGGT.......................................................................................................................................................	18	1	18.00	18	1	8	0	1	6	2
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	15.00	15	10	0	1	0	1	3
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	13.00	13	8	0	0	0	1	4
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA..............................................................................................................................	25	1	13.00	13	12	0	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC................................................................................................................................	23	1	13.00	13	4	0	0	0	4	5
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	12.00	12	6	0	0	0	0	6
......................................................................................................................................................GAGTATTACATCAGGTACTGC.................................................................................................................................	21	1	11.00	11	11	0	0	0	0	0

droGri2

CAGC-------------------A-TCAGC-----------------------------------------------ATCAGCA----TCC------------------------------GAAGCAGCATCACAAGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATTTAACCAACAACCAGTACTTATGTCATACTACGCCGTGCAGTGGGCGCACTAACCGCATGCCACGCC----T--------------------------------------------ACAAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	5833.00	5833	5705	128
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	4747.00	4747	3740	1007
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	699.00	699	665	34
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	496.00	496	496	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	312.00	312	312	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	241.00	241	206	35
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	227.00	227	224	3
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	59.00	59	59	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	39.00	39	29	10
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC.......................................................................................	22	1	38.00	38	38	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	36.00	36	34	2
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	33.00	33	33	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	25.00	25	25	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	24.00	24	24	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	18.00	18	7	11
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	16.00	16	16	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	12.00	12	12	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG........................................................................................	21	1	11.00	11	10	1
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	11.00	11	9	2
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	10.00	10	10	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	10.00	10	6	4
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	9.00	9	9	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT......................................................................................	23	1	9.00	9	7	2
..................................................................................................................................TCACAAGCGTCTGTACGGT.......................................................................................................................................................	19	1	9.00	9	2	7
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	8.00	8	8	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	8.00	8	8	0
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	7.00	7	6	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	7.00	7	1	6
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	6.00	6	6	0
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	6.00	6	6	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGC.......................................................................................	21	1	5.00	5	5	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	4.00	4	4	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	4.00	4	4	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	4.00	4	2	2
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	3.00	3	3	0
............................................................................................................................................................................GTGCCATTTAACCAACAAC.............................................................................................................	19	1	3.00	3	3	0
.........................................................................................................................................................TATTACATCAGGTACTGGTT...............................................................................................................................	20	1	2.00	2	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGA..............................................................................................................................	25	1	2.00	2	2	0
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	2.00	2	2	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGCT......................................................................................	22	1	2.00	2	2	0
.......................................................................................................................................................AGTATTACATCAGGTACT...................................................................................................................................	18	1	2.00	2	2	0
.................................................................................................................................................................................................GTACTTATGTCATACTACGC.......................................................................................	20	1	2.00	2	2	0
...................................................................................................................................................GTTGAGTATTACATCAGGTACTGGT................................................................................................................................	25	1	2.00	2	2	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	2.00	2	2	0
...................................................................................................................................CACAAGCGTCTGTACGGT.......................................................................................................................................................	18	1	2.00	2	2	0
.............................................................................................................................................................................TGCCATTTAACCAACAAC.............................................................................................................	18	1	1.00	1	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTAA..............................................................................................................................	24	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTAC.............................................................................................................................	26	1	1.00	1	1	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA......................................................................................	23	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAC...............................................................................................................................	24	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAGT.............................................................................................................................	26	1	1.00	1	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG...............................................................................................................................	23	1	1.00	1	1	0
................................................................................................................................................................................................AGTACTTATGTCATACTACG........................................................................................	20	1	1.00	1	1	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCTT.....................................................................................	24	1	1.00	1	0	1
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC.........................................................................................	20	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG..............................................................................................................................	25	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	1.00	1	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAC..............................................................................................................................	25	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	1.00	1	1	0
.................................................................................................................................ATCACAAGCGTCTGTACGGT.......................................................................................................................................................	20	1	1.00	1	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTG.....................................................................................................................................	18	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	1.00	1	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGGA.............................................................................................................................	26	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	1.00	1	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTC...............................................................................................................................	23	1	1.00	1	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGC................................................................................................................................	22	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTCT.............................................................................................................................	26	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTGA.............................................................................................................................	26	1	1.00	1	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	1.00	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTCTG...................................................................................................................................	20	5	0.20	1	0	1

droAna3

----------------------------------------------------------------------------------------------------------------------------------------GCGTCTGTACGGCTGAGTATTACATCAGGTACTGGTGTGCCTTTAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCTC-------------------------CAAAAAAAAAAA----CAAAACAGAAAACTAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	19358.00	19358	15791	1552	76	328	856	755
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	18341.00	18341	8133	1332	272	2374	4860	1370
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	4914.00	4914	3962	22	15	243	401	271
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	2227.00	2227	1864	108	8	21	101	125
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	1603.00	1603	1402	184	3	3	5	6
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	1350.00	1350	813	48	8	127	250	104
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	807.00	807	721	12	3	16	38	17
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	470.00	470	24	412	0	23	9	2
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	317.00	317	315	1	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	308.00	308	153	1	3	26	110	15
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	204.00	204	139	53	0	5	1	6
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	157.00	157	79	40	0	17	14	7
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	154.00	154	81	46	8	4	9	6
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	122.00	122	121	1	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC.......................................................................................	22	1	116.00	116	83	29	0	1	1	2
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	80.00	80	79	0	0	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	74.00	74	43	21	1	1	2	6
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	70.00	70	69	0	0	1	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	53.00	53	10	24	9	4	6	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	48.00	48	5	32	9	0	1	1
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	47.00	47	46	0	0	0	1	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	41.00	41	13	2	1	2	21	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	39.00	39	12	6	1	3	7	10
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	36.00	36	12	17	1	4	0	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	34.00	34	18	7	0	1	5	3
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	33.00	33	0	33	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	32.00	32	13	1	4	1	8	5
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	31.00	31	19	0	0	0	6	6
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	31.00	31	23	7	0	0	0	1
....................................................................................................................................................CTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	28.00	28	21	4	0	1	1	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	28.00	28	10	6	1	7	1	3
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG........................................................................................	21	1	27.00	27	25	1	0	0	1	0
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	22.00	22	17	2	3	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	22.00	22	9	5	2	0	6	0
....................................................................................................................................................CTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	21.00	21	13	3	1	3	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	18.00	18	3	1	0	3	6	5
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	17.00	17	9	7	0	0	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	16.00	16	13	1	0	1	1	0
..........................................................................................................................................................ATTACATCAGGTACTGGC................................................................................................................................	18	1	14.00	14	0	14	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	13.00	13	13	0	0	0	0	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGC.......................................................................................	21	1	11.00	11	11	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	11.00	11	10	1	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGC................................................................................................................................	22	1	11.00	11	3	8	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	10.00	10	9	1	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	10.00	10	3	0	2	0	5	0
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	8.00	8	3	0	0	0	5	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	8.00	8	5	0	1	1	1	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG...............................................................................................................................	23	1	8.00	8	7	1	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	7.00	7	0	3	4	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTG..................................................................................................................................	18	1	7.00	7	7	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC................................................................................................................................	23	1	7.00	7	0	7	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTG..............................................................................................................................	25	1	7.00	7	2	0	0	0	5	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT......................................................................................	23	1	6.00	6	5	1	0	0	0	0
............................................................................................................................................................................GTGCCTTTAATCCAACAAC.............................................................................................................	19	1	6.00	6	0	6	0	0	0	0
....................................................................................................................................................CTGAGTATTACATCAGGTACTG..................................................................................................................................	22	1	5.00	5	5	0	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT...............................................................................................................................	22	1	4.00	4	4	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGC................................................................................................................................	20	1	4.00	4	1	3	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	4.00	4	3	1	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGC.................................................................................................................................	21	1	4.00	4	1	3	0	0	0	0
....................................................................................................................................................CTGAGTATTACATCAGGTACT...................................................................................................................................	21	1	4.00	4	3	1	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC................................................................................................................................	23	1	3.00	3	1	0	0	2	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTGT.............................................................................................................................	26	1	3.00	3	0	0	0	0	2	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	3.00	3	1	1	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	3.00	3	1	0	0	2	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCA......................................................................................	23	1	3.00	3	3	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTAA..............................................................................................................................	24	1	3.00	3	0	3	0	0	0	0

droBip1

----------------------------------------------------------------------------------------------------------------------------------------GCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC--C-A-GATACCTCAAAATATATCCA----------------AA-------ACAGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CCGC-------------------C-ACAGCAGATCA----------------------GA--TCAGAGC-------------AGATCGGAG------------------------------GAGC--TC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCATAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGCCAAA----------------------------------------------------GCAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CCAT-------------------T-GG---------AGCAGTAGCACTTCAATCGGCCCT--CGGGAAG---TG--AAGGACCCAAT----------------CGAA---AG---------AAGAGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTAAAATCGAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC--C-A-GAA------------------------CC-CGAG------------AAAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGC---------------------------TATCCAACGAGTAGGGAT--------CCCT--CGCGACG---TGAGAAGGAACAGC----------------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCCTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCAAA--------------------------------------------------ATACAAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TCAT-------------------C-GC------------------CAT--------CCCT--CGCGACG---TG--AAGGAGC-------------------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAACTTAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCA-------------------------------------------------------AAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ACAG-------------------C------------------------------------------------------------------------------------------------CCCAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCC-----------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CCAA-------------------C-GC--------------------------------------G-----------AGGA--------A------------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAC-------------------------CA----------------AAAGA--AAAGAAA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TAAA-------------------GGACAGCCATCCA----------------------TC----------------------CATCCATAC-----------------------------CCAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTTAAATAAACAACCAGTACTTATGTCATACTACGCCGTGCACCGATCGCACTAACCGCATGCCAAC--TTACC-A------------------------CG-CGCG------------CGCT	Size	Hit Count	Total Norm	Total
No Reads

dm3

CCAT-------------------T-GC-----------------------------------CGCGACGCACTG--AAGGATCGTCTGTAC------------------------------GAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAATCCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATG-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	1389268.00	1389268	86	9	64	13	138	252	3	54	246	378	125	167	116	3	41	6	14	19	17	0	1634	1777	994	9014	6	23	36	14	86	110	1184	1902	4	6	15	4271	15210	5343	8183	4789	1069	8041	30306	2814	2123	6707	13645	4933	11118	12040	30487	6370	2918	0	0	0	4826	3192	379	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1873	1859	1432	1468	129	1342	284	6277	4644	115	121	2552	981	416	5389	540	272	1928	1337	4623	12364	435	387	1617	4016	2232	1464	143	183	526	4762	959	1744	1100	2074	2156	1872	334	4689	14	850	218	5	121	1	176	91	377	10	478	29	884	502	3	8	2	4	216	380	538	455	842	22	172	155	514	234	94	11032	12057	14269	11123	13027	28215	2537	4322	6291	3574	0	8	8	0	3	63	6	37	20	24	16	2013	2508	0	1677	39	17	562	2121	125	1262	95	1799	196	2158	721	88	22	26	3	0	1833	31317	6041	14591	3042	114	25	55	11491	256	14737	633	34	35	8	36	45	2642	5139	35	12	52	37	19	77	67	56	32	14472	38234	5101	4236	40003	17223	75064	97623	31447	16722	22114	53925	322	26	35	188	3	4	0	0	7025	5177	8	4594	650	444	2533	868	1156	19627	713	264	4146	1208	1627	78	1721	611	342	3051	152	529	7523	4671	1660	454	1750	6569	3411	860	2741	656	256	96	7361	43271	4359	23047	6529	42726	3998	26663	87	382	1537	787	166	979	1309	998	1430	2477	15837	4094	2508	1068	1362	20539	51932	4334	9925	4142	4112	3607	2661	144	126	8067	14843	19594	2183	1088	1749	1406	550	134	350	480	395	214	155	3616	1534	4472	2031	5355	3191	2737	1955	475	5232	837	1157	7179
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	307708.00	307708	1	0	3	0	131	341	9	24	8	83	47	108	82	2	22	1	0	2	4	0	530	1036	250	28650	0	6	10	5	36	60	936	1851	11	4	27	577	1156	900	1036	633	154	1957	3130	605	679	1209	612	1227	1369	3415	3434	1207	480	0	0	0	3177	2395	499	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	429	454	366	369	154	965	82	164	261	341	96	1424	972	254	4037	470	172	1267	1712	5274	18444	226	182	1596	3220	2583	2826	182	130	544	2773	1022	2274	892	713	830	415	347	8260	2	182	33	0	7	0	23	10	36	0	246	31	336	238	3	10	7	10	65	60	157	105	352	8	70	114	124	65	31	1424	2097	1638	1446	1401	3968	401	772	944	747	0	0	0	0	0	10	0	7	4	4	5	674	866	0	406	11	5	164	2036	68	1009	39	316	7	448	43	0	0	1	4	0	550	17071	2827	8436	544	14	4	2	11282	36	8712	340	3	1	0	0	4	486	1127	5	4	18	13	0	41	8	7	1	4276	5041	1633	1336	1072	532	4099	5514	981	405	526	5700	4	1	0	29	0	0	0	0	258	309	1	704	180	39	285	138	83	1703	275	29	1590	78	190	24	119	21	64	145	8	21	266	208	221	36	338	7999	399	99	193	336	29	13	1296	7589	602	3150	1180	7516	709	4812	9	131	315	183	38	402	440	484	465	73	547	533	179	53	203	1757	4671	310	782	852	52	601	412	12	7	844	961	1459	298	83	97	76	39	9	12	14	16	20	9	421	298	886	238	612	507	422	68	30	6317	24	354	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	274095.00	274095	3	0	8	1	44	163	6	20	17	100	35	56	51	1	8	1	11	6	1	0	71	103	132	12020	0	2	0	1	2	0	0	0	0	0	104	329	730	511	586	305	33	735	1963	268	222	522	484	249	398	1108	2241	354	157	0	0	0	710	358	85	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	404	362	296	250	28	374	48	465	184	206	39	485	290	133	1564	161	58	310	110	1095	5449	25	21	203	215	545	552	37	46	185	592	286	624	30	66	47	94	29	1273	11	547	97	1	53	1	126	53	218	7	226	28	447	212	16	16	35	48	310	452	635	563	752	39	34	76	64	19	51	1107	734	1253	536	1177	1741	256	500	539	370	4	10	11	1	3	2	0	0	0	1	0	779	1187	0	746	7	10	173	1329	79	846	35	545	35	702	76	5	0	0	0	1	576	1069	350	2068	262	10	7	11	938	28	1873	209	2	3	2	1	11	108	276	0	0	6	5	0	2	1	0	1	4325	7611	663	434	16776	7440	35118	40154	14228	7850	10512	23864	32	57	28	54	5	5	0	0	97	75	0	50	54	14	73	45	25	1712	130	3	748	33	46	12	71	18	29	60	8	5	65	55	65	11	95	1703	47	32	28	48	8	1	446	2699	169	915	298	2061	195	1331	2	76	150	83	21	340	349	368	299	97	1125	542	268	39	136	88	2763	21	547	21	2	15	12	35	4	573	760	1246	305	48	76	46	24	7	12	6	5	14	7	441	226	790	297	941	559	438	84	45	6310	52	359	33
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	122467.00	122467	0	0	0	0	61	372	8	13	8	34	41	34	33	6	6	0	0	8	3	0	4	19	10	11600	0	0	4	2	15	22	370	555	3	4	56	115	111	126	188	78	21	58	130	64	91	117	69	59	230	158	137	127	68	0	0	0	312	245	70	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	340	354	273	265	176	798	66	169	184	172	136	2351	623	223	2269	338	171	534	856	4755	23566	115	124	1189	1530	2272	3828	175	144	598	3991	1323	3057	845	281	881	176	497	9815	2	23	74	0	33	2	6	7	26	0	45	5	38	23	3	3	28	39	1	0	0	0	8	1	21	11	2	7	9	237	322	137	167	81	710	96	132	72	62	0	0	0	1	1	7	0	0	0	0	0	111	137	0	68	7	3	87	624	24	403	16	93	5	137	5	0	0	6	1	0	267	286	30	520	43	4	0	0	203	0	466	237	0	0	0	0	0	3	19	0	0	0	3	9	0	3	2	3	225	169	116	94	528	265	3027	2843	650	193	164	2034	56	0	1	112	0	0	0	0	34	23	0	195	79	18	157	9	23	1686	432	34	1783	53	559	57	71	26	186	35	2	4	34	41	26	2	44	1035	34	5	23	34	2	0	224	1282	54	314	84	624	61	500	1	12	115	12	11	136	93	124	446	26	29	164	36	95	360	223	563	60	122	220	10	144	43	48	8	93	94	173	166	28	45	32	8	2	2	8	2	4	3	371	388	1080	122	288	265	281	19	31	3789	10	100	4
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.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	3728.00	3728	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	2	0	0	0	0	1	0	0	0	0	0	0	16	46	14	32	5	4	8	133	5	4	7	16	7	17	25	78	17	5	0	0	0	1124	719	110	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	2	1	1	0	0	2	12	0	0	0	1	0	0	0	0	1	1	0	2	1	0	0	1	0	0	0	1	0	5	0	0	0	0	0	0	0	2	0	0	3	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	6	20	18	14	15	57	11	24	25	14	0	0	1	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	3	0	3	1	1	0	3	1	0	0	0	0	0	2	7	2	11	1	0	0	0	2	0	12	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	28	137	2	2	63	29	60	142	83	35	23	63	2	0	0	3	0	0	0	0	4	7	1	4	0	5	11	5	12	8	2	1	19	29	20	2	47	9	0	3	0	1	6	1	2	0	0	2	0	0	2	0	0	0	1	2	0	0	1	3	0	4	0	0	6	7	0	2	1	1	1	1	7	1	0	1	0	2	10	1	2	1	3	0	0	0	1	1	4	9	3	1	1	5	10	0	4	2	2	0	0	0	1	3	2	0	1	2	3	9	15	1	5	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	2993.00	2993	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	23	0	0	0	0	1	1	7	19	0	0	0	5	12	3	5	4	3	18	41	2	2	8	18	1	12	16	31	5	3	0	0	0	40	41	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	20	10	24	0	2	3	48	20	0	6	15	1	1	11	1	2	8	1	7	22	1	0	7	10	5	3	2	13	1	50	3	4	0	3	5	12	1	6	0	7	2	0	0	0	2	1	2	0	6	1	8	10	0	0	0	0	0	5	2	0	5	0	1	0	0	0	1	10	19	28	14	26	36	7	5	10	2	0	0	0	0	0	0	0	0	1	0	0	25	35	0	18	1	0	2	20	2	9	1	15	2	31	6	0	0	0	0	0	13	19	8	8	2	0	1	0	12	0	16	0	0	0	0	0	0	2	7	0	0	0	0	0	0	2	0	0	18	54	8	4	43	29	148	106	57	22	37	127	1	1	1	1	0	0	0	0	8	3	0	6	0	9	12	6	5	26	1	2	3	5	6	1	14	3	0	20	2	1	25	17	3	0	6	17	20	1	10	5	3	1	23	148	12	66	8	78	5	39	8	4	7	3	0	1	1	4	2	8	22	3	4	4	3	34	106	7	23	1	9	4	3	5	2	37	29	38	5	3	3	4	3	0	0	4	1	0	0	9	3	5	6	6	3	2	13	3	26	0	7	98
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	2602.00	2602	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	10	8	0	4	0	0	0	0	0	0	0	0	0	0	0	6	9	1	1	6	2	1	2	2	1	1	11	4	11	2	1	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	7	6	11	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	1	0	1	3	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	2	0	0	19	35	25	22	26	61	7	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	73	23	7	6	0	0	0	34	0	4	0	7	1	0	2	1	1	7	0	0	0	0	0	0	0	0	0	237	413	261	184	0	0	3	4	0	0	0	1	0	0	0	0	0	0	0	0	29	11	0	1	0	1	0	0	0	2	0	0	4	0	1	0	2	1	0	2	0	0	2	1	2	1	1	15	3	0	2	0	0	0	30	146	3	21	6	30	2	28	0	14	2	0	0	2	1	0	2	5	75	7	12	4	5	14	41	5	14	7	5	7	8	0	0	8	19	23	0	2	1	0	0	0	0	0	0	0	0	3	4	3	0	8	0	1	2	0	2	0	0	331
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	1839.00	1839	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	18	0	109	0	0	0	1	9	4	13	21	0	4	0	4	4	5	0	3	0	3	29	1	4	5	3	3	10	11	19	4	3	0	0	0	54	42	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	8	3	4	1	2	0	0	1	1	0	4	44	3	5	5	1	2	8	27	108	1	5	11	23	14	16	1	0	1	10	3	17	4	1	1	0	0	33	0	2	0	0	0	0	1	1	0	0	2	5	7	2	1	3	30	60	0	0	0	0	0	2	0	0	0	0	0	6	11	3	5	6	17	2	2	8	1	0	0	0	0	0	0	0	0	1	0	0	1	14	0	8	1	1	1	22	4	14	9	7	0	3	4	0	0	0	1	0	3	57	14	73	8	2	0	0	26	0	73	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	33	65	16	12	1	2	32	25	4	0	0	1	0	0	0	0	0	0	0	0	6	5	0	6	1	1	1	1	0	8	5	0	11	1	3	0	0	2	0	4	0	0	4	1	1	0	2	28	5	0	1	5	0	0	3	11	0	5	1	11	4	15	0	3	4	3	0	6	10	17	23	1	5	7	3	2	12	3	10	1	2	7	0	0	3	2	0	6	2	3	1	1	1	0	0	0	0	0	0	0	0	4	2	5	1	6	5	5	3	1	24	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG........................................................................................	21	1	1203.00	1203	0	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	35	0	0	0	0	7	0	0	0	0	0	1	0	2	0	0	0	0	1	4	0	0	0	0	1	0	5	2	0	2	0	0	0	21	17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	32	23	29	0	16	3	16	13	0	5	26	0	0	8	1	0	1	2	4	8	0	0	2	10	1	1	5	3	3	52	9	21	1	1	3	6	5	0	0	0	3	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	3	3	3	1	1	4	0	0	0	0	0	1	0	0	0	0	0	0	0	1	9	0	1	0	0	1	4	3	4	8	6	1	3	8	0	0	1	0	0	1	4	1	1	0	0	0	0	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	3	0	0	2	8	1	0	56	12	94	59	42	11	35	57	7	1	0	9	0	0	0	0	3	2	0	1	0	1	26	3	0	1	1	0	0	4	8	0	3	0	0	1	0	2	10	12	2	0	4	4	28	4	6	2	0	1	5	6	0	1	0	9	2	10	0	0	5	10	2	0	0	0	2	3	5	0	1	10	0	4	12	1	4	0	17	0	0	2	2	0	3	1	1	5	0	2	3	0	3	1	1	0	0	0	0	2	1	2	0	1	3	2	4	1	2	0
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	1194.00	1194	0	0	0	0	0	2	0	0	0	3	0	1	1	0	0	0	0	0	0	0	0	0	0	53	0	0	0	0	0	0	0	0	0	0	1	0	1	2	2	1	0	1	3	0	0	1	0	0	0	2	8	2	1	0	0	0	27	20	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	14	5	12	0	1	0	0	2	6	6	23	2	1	12	1	0	3	1	10	20	0	0	1	1	12	2	7	6	18	56	6	7	0	2	0	0	0	10	0	4	0	0	1	0	1	2	2	0	4	0	4	2	0	1	0	0	2	0	2	7	0	0	0	0	0	0	0	3	5	1	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	14	0	12	0	0	2	18	2	14	0	11	1	16	0	0	0	0	0	0	10	4	0	1	0	0	0	0	1	0	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	8	9	2	2	31	15	106	112	50	19	23	73	5	8	3	9	0	0	0	0	0	0	0	0	0	0	2	0	0	4	0	0	1	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	1	0	0	0	0	0	1	30	1	2	1	20	1	15	1	1	3	0	0	0	1	2	0	0	2	4	0	0	0	0	19	0	3	0	0	0	0	5	0	5	8	5	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	6	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	1194.00	1194	0	0	0	0	3	4	0	0	0	2	0	1	0	0	0	0	0	1	0	0	11	25	1	41	0	0	0	0	0	0	0	0	0	0	0	3	12	3	21	1	1	64	4	3	5	5	2	3	2	12	14	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	11	8	0	0	0	3	3	9	1	63	0	0	13	12	25	92	0	1	3	7	6	18	0	0	4	11	12	12	2	3	3	0	2	63	0	3	0	0	0	0	0	0	0	0	20	0	9	14	0	0	1	0	0	0	0	1	1	0	0	1	0	0	0	5	9	10	13	10	58	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	5	1	0	3	0	0	0	10	0	1	0	0	0	0	0	0	0	0	0	0	1	6	1	56	2	0	0	0	6	0	4	0	0	0	0	0	0	3	5	0	0	0	0	0	0	0	0	0	0	1	5	0	2	0	3	3	1	0	0	2	1	0	0	0	2	0	0	0	0	0	0	52	0	2	3	1	1	32	2	0	16	0	0	0	10	3	0	16	0	4	2	0	0	0	1	56	1	1	2	0	0	0	1	2	0	2	0	2	1	0	0	1	0	0	0	5	2	1	9	0	0	0	0	0	1	11	2	5	0	7	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0	3	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	830.00	830	0	0	0	0	3	8	1	3	3	10	1	7	4	0	0	0	0	0	1	0	0	1	0	24	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	4	6	0	0	0	2	1	0	2	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	3	0	0	0	1	0	1	6	1	8	6	0	2	0	9	40	0	0	7	4	3	13	0	0	2	2	3	2	0	0	3	0	0	43	0	9	2	0	0	0	2	0	0	0	5	1	5	3	0	0	0	4	0	0	2	1	1	0	0	0	0	0	0	4	4	4	2	3	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	8	0	8	0	1	0	13	0	3	0	5	0	3	1	0	0	0	0	0	4	12	0	17	0	0	0	0	5	0	10	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	6	11	5	1	7	5	21	25	13	9	5	43	0	0	0	0	143	11	0	0	0	0	0	0	1	0	0	0	0	6	0	0	11	0	2	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	1	5	0	1	0	1	0	1	0	0	1	1	0	3	1	1	3	0	4	0	0	0	3	2	0	0	1	3	0	1	0	0	0	2	0	2	2	1	1	0	2	0	0	0	0	0	0	1	3	10	1	1	4	1	0	1	21	1	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	801.00	801	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	2	0	2	0	0	1	0	0	0	0	0	0	0	0	1	2	2	3	1	0	2	2	2	1	2	2	1	3	11	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	4	7	1	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	1	0	0	4	10	5	7	9	12	1	4	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	7	1	2	0	0	0	16	0	4	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	4	10	9	2	0	0	0	3	0	0	1	0	1	0	0	0	0	0	0	0	43	9	0	2	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	62	167	5	9	4	13	1	3	0	2	0	0	0	0	0	1	2	1	19	6	4	1	2	2	7	2	1	10	3	3	5	0	0	1	6	5	0	1	2	2	0	0	0	1	0	0	0	4	2	4	0	6	0	1	0	0	1	0	0	125
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.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	656.00	656	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	12	7	5	4	2	5	15	1	2	3	1	4	22	11	7	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	0	0	0	0	2	0	0	2	1	1	2	0	1	4	3	3	4	0	0	1	4	0	1	0	0	0	0	0	0	0	0	0	1	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	2	0	0	2	1	4	5	2	15	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	5	0	2	0	0	1	1	0	0	0	0	0	0	1	11	1	10	0	0	0	0	8	0	6	0	0	0	0	5	0	0	1	0	0	0	0	0	0	0	0	0	6	29	0	1	21	11	18	36	19	18	15	19	0	0	0	0	18	7	0	0	5	3	0	3	1	0	0	1	1	9	3	0	10	0	0	0	3	1	0	0	0	1	3	2	0	0	0	4	1	0	1	0	0	0	4	11	2	13	7	15	3	6	0	0	1	0	0	1	0	1	2	0	4	1	1	1	0	9	17	2	3	2	2	1	0	0	0	5	8	4	2	0	0	0	0	0	0	0	0	0	0	1	0	2	2	5	0	2	0	1	2	1	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	588.00	588	0	0	0	0	9	19	0	2	3	6	3	10	6	0	0	0	0	0	0	0	0	0	0	46	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	1	0	6	0	0	1	2	1	1	0	2	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	17	3	0	0	3	0	3	5	0	7	8	0	2	2	8	21	1	1	1	3	13	64	0	0	0	12	8	11	5	1	7	2	2	56	0	1	0	0	0	0	1	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	4	4	1	5	0	6	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	1	7	0	1	0	0	0	0	0	0	0	0	0	0	4	8	2	11	2	0	0	0	12	0	6	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	4	7	1	0	1	2	0	1	0	0	5	0	0	0	0	5	0	0	0	1	1	0	0	0	0	0	0	0	1	1	0	11	0	1	0	0	0	0	1	0	0	0	0	0	0	0	12	2	0	0	1	0	0	1	3	0	3	1	5	0	3	0	1	0	0	0	2	0	1	1	1	1	0	1	0	1	6	3	0	0	0	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	543.00	543	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	0	0	2	1	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	2	0	0	0	4	3	0	0	0	0	0	1	1	0	0	0	0	0	4	2	1	2	11	0	0	0	0	1	3	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	2	0	1	15	0	1	0	0	0	0	1	5	1	4	8	17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	8	1	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	2	0	0	7	12	2	4	2	0	2	1	0	0	0	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	9	66	1	2	1	2	0	4	0	0	0	0	0	0	0	0	1	0	3	1	0	0	0	0	5	0	1	0	0	0	0	1	0	0	2	2	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	263
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.....................................................................................................................................................TGAGTATTACATCAGGTACTATC................................................................................................................................	23	1	482.00	482	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	463	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	467.00	467	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	18	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	2	8	1	0	1	0	1	1	6	4	0	1	0	0	0	19	16	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	0	2	1	0	1	3	1	0	6	1	0	2	0	1	1	7	6	21	0	0	6	13	6	4	1	1	2	8	1	1	1	1	1	3	0	1	0	5	2	0	0	0	0	0	1	0	4	0	5	4	0	0	0	0	3	0	0	1	4	1	0	0	0	0	0	1	4	4	2	2	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	12	0	3	0	0	1	31	0	14	0	7	0	4	1	0	0	0	0	0	3	7	0	2	1	0	0	0	11	0	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	5	3	3	2	1	0	6	1	2	1	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	3	0	0	0	1	0	0	0	0	0	0	0	1	0	0	8	0	1	0	0	0	0	1	9	0	0	2	13	1	8	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	10	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	4	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	442.00	442	0	0	0	0	0	4	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	2	0	15	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	2	1	25	6	0	0	1	0	1	0	7	11	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	2	0	0	0	1	0	1	1	0	2	0	0	0	0	1	12	0	0	0	0	4	4	0	0	0	0	2	2	1	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0	2	0	3	1	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	7	0	5	1	5	6	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	3	4	0	3	0	0	0	1	0	1	0	0	0	0	2	0	0	0	0	0	6	3	1	3	0	0	0	0	2	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	7	1	1	17	10	24	38	15	7	15	31	0	0	0	0	2	1	0	0	0	0	0	2	2	0	0	0	0	3	1	0	3	0	1	0	1	0	0	1	0	0	0	0	0	0	0	5	0	0	0	0	0	0	1	7	0	1	1	4	2	4	0	0	0	0	0	0	2	2	1	2	0	1	0	0	0	1	3	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	1	1	0	0	9	0	1	0
............................................................................................................................................................................GTGCCTTAAATCCAACAAC.............................................................................................................	19	1	381.00	381	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	2	2	0	0	14	56	21	0	0	15	0	1	0	2	0	0	3	4	3	0	0	0	7	2	0	2	0	1	57	0	13	0	0	5	3	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	5	24	41	5	4	19	8	2	3	5	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	379.00	379	0	0	0	0	2	7	0	0	0	1	1	3	1	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	59	1	0	1	0	0	0	2	2	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	2	0	8	2	0	0	0	3	14	0	0	5	0	0	19	1	0	0	0	1	7	0	0	1	0	0	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	3	3	2	0	8	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	3	5	0	1	0	0	0	6	0	0	0	1	0	0	0	0	0	0	0	0	5	3	0	10	0	0	0	0	4	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	2	4	0	0	0	6	3	0	0	0	2	0	0	0	0	9	2	0	0	0	0	0	1	0	1	0	0	0	2	0	0	3	0	0	0	0	0	0	2	0	0	0	0	0	0	0	12	0	0	0	0	0	0	1	16	1	5	0	5	0	6	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	8	3	0	0	2	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	9	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	366.00	366	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	3	0	1	15	1	2	1	2	2	4	4	7	1	0	0	0	0	60	28	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	2	1	1	2	1	8	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	13	2	0	4	3	8	5	7	3	0	7	1	0	0	0	0	0	0	0	1	0	1	1	0	1	1	1	7	1	0	0	1	4	1	0	4	0	1	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	1	0	4	0	0	5	3	0	0	0	1	3	0	3	2	1	0	1	2	12	0	1	1	0	0	0	0	0	3	1	4	4	0	0	3	9	0	1	2	1	0	0	4	1	2	1	3	2	1	2	3	13	2	5	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	356.00	356	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	3	1	1	1	0	1	6	2	1	1	2	3	3	2	5	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	7	10	0	3	12	4	1	6	2	1	2	3	3	17	6	5	4	7	4	3	0	2	9	11	3	2	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	4	0	3	5	4	3	0	1	2	2	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	5	0	1	0	1	0	0	0	0	0	0	0	0	1	10	3	2	0	0	0	0	5	0	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	2	5	9	1	0	2	3	0	0	0	0	0	0	0	0	2	1	0	1	0	1	1	0	0	5	0	0	2	1	0	0	1	0	0	2	0	0	1	1	0	0	0	3	2	0	0	1	1	0	6	18	1	2	5	4	3	1	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	1	0	0	0	0	1	1	2	0	0	1	0	1	0	1	0	0	11
.....................................................................................................................................................TGAGTATTACATCAGGTACA...................................................................................................................................	20	1	317.00	317	0	0	0	0	2	7	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	9	2	0	0	0	0	0	1	38	0	1	16	0	0	0	1	10	0	0	0	0	0	177	0	0	0	0	0	5	0	0	2	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	275.00	275	0	0	0	0	1	2	0	0	0	1	3	1	2	1	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	2	34	0	1	5	2	0	1	12	47	0	0	4	2	2	30	0	0	1	2	3	8	2	0	0	0	1	49	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	3	0	1	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	1	1	1	0	0	0	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	272.00	272	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	2	0	3	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	0	0	1	2	0	3	1	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	1	0	0	0	0	0	0	2	5	0	0	0	0	0	0	0	0	0	4	2	0	0	28	8	14	9	29	14	9	63	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	4	0	1	2	3	1	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	3	9	1	1	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0
...........................................................................................................................AGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	20	1	265.00	265	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	1	2	3	0	2	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	11	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	4	4	4	18	2	2	1	1	3	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	1	0	1	0	1	0	2	1	0	1	4	0	0	0	1	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	7	1	4	0	1	8	0	1	0	7	11	6	0	0	8	9	12	0	15	12	13	1	2	1	0	4	1	1	2	0	0	1	2	0	0	3	0	16	1	0	0
..........................................................................................................................................................ATTACATCAGGTACTGG.................................................................................................................................	17	1	199.00	199	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	46	41	45	48	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14
.............................................................................................................................GAGC------AGCGTCTGTACGGT.......................................................................................................................................................	18	1	180.00	180	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	6	2	3	10	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	1	0	0	3	0	0	0	1	3	0	2	0	0	1	0	0	12	1	0	0	0	4	1	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	4	4	0	0	2	0	1	8	3	7	2	2	6	3	0	0	6	3	13	0	0	0	10	0	1	0	0	0	0	0	1	1	2	0	0	1	0	4	2	8	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTC..............................................................................................................................	25	1	168.00	168	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	6	0	2	6	8	2	0	2	0	0	0	0	61	60	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGC.......................................................................................	21	1	167.00	167	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	19	2	13	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	2	0	6	0	0	0	0	0	0	4	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	11	4	19	14	6	2	7	8	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	166.00	166	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	3	2	0	2	0	0	1	0	1	15	0	0	2	4	17	3	0	0	0	20	1	2	0	0	0	0	0	5	0	0	0	0	0	0	0	0	1	0	4	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	6	0	6	0	2	0	4	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	8	4	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	3	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC................................................................................................................................	23	1	157.00	157	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	5	2	0	12	5	0	0	1	6	0	2	4	10	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	0	2	0	2	0	0	1	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	2	0	1	3	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	0	2	0	0	3	0	0	2	1	0	0	1	1	0	0	0	1	0	0	0	6	0	4	0	3	0	2	0	0	0	0	0	0	0	0	0	1	11	0	1	0	0	7	3	0	0	7	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	153.00	153	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	4	1	0	0	1	0	0	0	0	0	1	0	0	1	0	7	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	9	2	7	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	3	0	2	2	5	6	10	5	7	2	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	4	1	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	1	0	3	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	1	0	2	1	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTG................................................................................................................................	23	1	138.00	138	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	3	2	1	2	19	0	2	1	6	1	7	2	5	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	7	0	5	0	2	0	3	0	0	1	0	1	0	0	0	0	0	1	1	2	0	0	1	6	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGT.......................................................................................	22	1	133.00	133	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	1	2	1	0	0	1	0	2	0	0	0	5	0	5	0	0	1	4	0	0	0	0	0	0	0	0	1	3	1	2	3	0	2	0	34	0	1	0	1	10	0	1	0	2	1	1	2	0	1	0	1	0	0	3	1	0	0	0	0	1	6	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	133.00	133	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	4	2	3	3	2	1	0	0	0	0	0	36	24	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0
...........................................................................................................................................................TTACATCAGGTACTGGT................................................................................................................................	17	1	127.00	127	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	14	36	21	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	50
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT......................................................................................	23	1	126.00	126	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	1	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	4	1	4	3	0	1	5	1	0	0	0	0	0	0	0	0	0	0	2	1	0	2	1	0	0	1	0	1	0	0	0	4	0	0	0	0	0	3	3	0	0	0	0	5	1	0	0	2	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	1	1	1	0	2	0	1	4	0	0	0	5	0	0	0	1	4	0	3	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	1	2	1	1	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTAC.........................................................................................	20	1	126.00	126	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	7	7	8	0	0	0	3	4	0	1	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	17	0	2	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	2	2	2	0	0	0	1	0	0	2	0	0	0	0	1	0	0	0	0	1	5	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	4	0	0	0	1	5	1	0	1	2	0	0	1	0	0	0	0	0	2	0	0	0	6	1	0	0	0	0	0	1	0	0	4	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGT......................................................................................................................................	17	1	123.00	123	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	8	43	33	0	0	22	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................CCAGTACTTATGTCATACTACG........................................................................................	22	1	121.00	121	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	4	3	0	3	0	0	2	0	0	2	0	0	1	0	0	0	0	2	2	0	0	0	1	0	0	0	0	1	5	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	1	0	1	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	8	1	6	10	4	3	1	8	3	0	0	2	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	1	0	3	0	0	1	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0

droSim2

CCAT-------------------A-------------------GGGAACCA-------TTGCCGCGACGCACTG--AAGGATCGTCTGTAC------------------------------GATGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGAC--------------------------------------------------------CAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	153533.00	153533	2593	7947	717	13092	8782	646	49436	51013	4672	4270	1508	273	616	7959	1	0	8
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	146634.00	146634	1924	7044	3237	8440	24819	1830	28029	30295	4041	5054	16544	3410	768	11195	0	1	3
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	66231.00	66231	5602	12388	1154	4840	31385	2201	287	281	133	213	5334	171	131	2108	0	0	3
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	39669.00	39669	12644	26484	245	128	0	0	16	11	6	5	28	0	4	98	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	32503.00	32503	7776	9618	318	934	11917	843	47	56	5	3	149	109	19	684	2	2	21
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	22640.00	22640	1455	2172	428	34	17229	1241	16	12	3	1	28	3	0	16	0	1	1
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	13660.00	13660	2	4	0	3	12552	785	17	42	2	5	243	2	0	1	0	1	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	5382.00	5382	2192	3112	50	7	0	0	6	5	1	1	7	0	0	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	3299.00	3299	17	49	17	118	0	0	645	738	618	578	43	20	27	429	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	2915.00	2915	188	747	46	423	0	0	392	326	68	99	132	44	10	440	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	1716.00	1716	182	882	499	46	0	0	30	28	1	3	32	8	0	5	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	1612.00	1612	155	252	14	125	0	0	197	231	55	43	33	1	31	475	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	1546.00	1546	11	62	1	1051	191	9	58	61	17	26	7	3	3	45	0	0	1
.............................................................................................................................................................ACATCAGGTACTGGT................................................................................................................................	15	1	1124.00	1124	0	0	0	0	0	0	1	0	3	9	1111	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	1042.00	1042	14	27	2	675	188	18	5	8	4	2	70	7	0	21	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	1023.00	1023	178	444	243	44	0	0	22	33	3	6	40	4	1	5	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	971.00	971	4	34	25	22	18	2	1	3	2	3	846	8	0	3	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	965.00	965	460	487	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	700.00	700	11	22	1	367	270	14	0	0	0	0	6	0	0	9	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	635.00	635	1	3	5	22	0	0	42	48	169	244	8	0	7	86	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGC.......................................................................................	22	1	567.00	567	37	31	124	17	45	4	7	6	0	0	104	98	7	86	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGG.......................................................................................................................................	16	1	474.00	474	0	0	0	0	0	0	10	15	1	3	445	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	458.00	458	0	1	1	8	0	0	23	25	182	196	6	0	1	15	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACG...................................................................................................................................	20	1	455.00	455	161	282	10	1	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGT......................................................................................................................................	17	1	432.00	432	0	0	0	0	0	0	1	4	0	0	426	0	0	0	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	350.00	350	14	26	2	32	0	0	106	97	9	7	5	0	2	50	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	325.00	325	9	10	17	14	251	11	5	1	0	0	2	5	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	233.00	233	0	2	2	6	11	0	0	0	0	0	211	0	0	1	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACG........................................................................................	21	1	216.00	216	17	13	36	7	23	1	0	6	0	0	19	21	7	66	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	197.00	197	1	4	0	1	180	10	0	0	0	0	0	0	0	0	0	0	1
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	189.00	189	5	3	0	40	129	9	0	0	0	0	1	0	0	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	184.00	184	1	0	0	4	0	0	4	5	8	5	1	0	12	144	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTG..................................................................................................................................	16	1	147.00	147	0	0	0	0	0	0	2	1	0	0	144	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTAC.........................................................................................	20	1	146.00	146	12	2	13	0	108	7	0	0	0	0	2	1	0	1	0	0	0
...........................................................................................................................................................TTACATCAGGTACTGGT................................................................................................................................	17	1	142.00	142	0	0	0	0	0	0	1	2	0	2	137	0	0	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGG.................................................................................................................................	17	1	135.00	135	0	0	0	0	0	0	12	5	2	2	113	0	0	1	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	135.00	135	46	85	1	1	0	0	0	0	0	2	0	0	0	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	132.00	132	2	5	1	3	5	0	5	5	0	0	106	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	103.00	103	11	73	0	17	0	0	0	0	0	0	0	0	0	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTA................................................................................................................................	23	1	89.00	89	28	52	0	1	0	0	0	1	1	2	1	0	0	3	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	78.00	78	7	9	0	56	0	0	0	0	0	0	2	1	0	3	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	73.00	73	9	10	0	4	0	0	0	1	5	7	15	0	0	22	0	0	0
.............................................................................................................................GAGC------AGCGTCTGTACGGT.......................................................................................................................................................	18	1	72.00	72	36	26	2	0	0	0	0	0	0	0	7	1	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCCG.....................................................................................	24	1	72.00	72	0	0	0	0	66	6	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	72.00	72	10	28	0	6	0	0	4	5	2	1	10	3	1	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAAA..............................................................................................................................	25	1	71.00	71	0	1	0	0	0	0	2	2	8	5	2	0	3	48	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	68.00	68	3	1	1	55	2	0	2	1	0	0	1	0	0	2	0	0	0
...........................................................................................................................TGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	20	1	67.00	67	0	2	0	1	0	0	0	0	0	0	13	1	0	50	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTA..........................................................................................	19	1	67.00	67	0	0	0	0	59	1	0	1	0	0	5	0	0	1	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	67.00	67	4	2	7	29	6	0	0	1	1	0	9	4	0	4	0	0	0
........................................................................................................................................................GTATTACATCAGGTACT...................................................................................................................................	17	1	60.00	60	0	0	0	0	0	0	1	1	0	0	58	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCC......................................................................................	23	1	59.00	59	3	0	1	0	50	3	0	0	0	0	1	0	0	1	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	49.00	49	0	6	0	9	2	0	5	10	0	2	14	0	0	1	0	0	0
............................................................................................................................................................TACATCAGGTACTGGT................................................................................................................................	16	1	48.00	48	0	0	0	0	0	0	0	5	0	1	42	0	0	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACT...................................................................................................................................	15	1	45.00	45	0	0	0	0	0	0	0	1	0	0	44	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCA......................................................................................	23	1	43.00	43	0	0	0	2	0	0	13	17	0	0	2	3	1	5	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	39.00	39	2	0	0	0	33	0	1	0	0	0	2	1	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	38.00	38	0	0	0	8	2	0	0	8	0	0	14	0	1	5	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTG..................................................................................................................................	17	1	37.00	37	0	0	0	0	0	0	0	0	0	0	37	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	35.00	35	4	6	0	23	0	0	0	0	0	0	0	0	0	2	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGCT...............................................................................................................................	24	1	34.00	34	8	20	5	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	30.00	30	1	6	0	18	5	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................TTACATCAGGTACTGG.................................................................................................................................	16	1	30.00	30	0	0	0	0	0	0	6	7	0	0	16	0	0	1	0	0	0
............................................................................................................................GGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	19	1	30.00	30	11	12	1	1	1	0	0	0	0	0	0	0	0	4	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTG..................................................................................................................................	18	1	30.00	30	1	5	1	4	8	0	0	0	0	0	10	0	0	1	0	0	0
............................................................................................................................................................................GTGCCTGAAATCCAACAACC............................................................................................................	20	1	30.00	30	0	0	0	0	30	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACT...........................................................................................	18	1	29.00	29	2	1	0	0	16	2	1	0	0	0	7	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAG........................................................................................................................................	15	1	29.00	29	0	0	0	0	0	0	0	0	0	0	27	0	0	0	1	0	1
.......................................................................................................................................................AGTATTACATCAGGTACT...................................................................................................................................	18	1	28.00	28	7	4	0	5	6	1	0	0	0	0	4	0	0	1	0	0	0
..........................................................................................................................ATGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	21	1	27.00	27	4	3	0	1	0	0	0	0	0	0	2	0	1	16	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAA................................................................................................................................	23	1	25.00	25	1	2	0	0	0	0	1	0	1	0	1	0	0	19	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	24.00	24	2	12	0	3	0	0	1	6	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAC................................................................................................................................	23	1	22.00	22	6	5	8	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGT.................................................................................................................................	18	1	20.00	20	6	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTC................................................................................................................................	23	1	20.00	20	4	14	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	20.00	20	0	0	0	10	7	0	0	0	0	0	1	1	0	1	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	20.00	20	0	0	0	12	4	0	0	0	1	0	1	0	0	2	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTG..................................................................................................................................	22	1	19.00	19	0	0	0	8	11	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATA.............................................................................................	16	1	18.00	18	0	0	0	0	0	0	1	0	0	0	17	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGAAA...............................................................................................................................	24	1	17.00	17	0	0	0	0	0	0	0	0	1	0	0	0	3	13	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	17.00	17	0	1	0	12	0	0	2	0	0	1	1	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTAT.................................................................................................................................	22	1	16.00	16	4	11	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................GATGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	22	1	16.00	16	2	0	0	0	0	0	0	0	0	0	0	1	1	12	0	0	0
...........................................................................................................................................................TTACATCAGGTACTG..................................................................................................................................	15	1	15.00	15	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	15.00	15	0	3	0	2	0	0	0	0	0	0	10	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGTAA...............................................................................................................................	24	1	14.00	14	3	9	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGG................................................................................................................................	18	1	13.00	13	0	6	6	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	12.00	12	1	1	0	0	0	0	1	2	0	2	0	0	0	5	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGT.................................................................................................................................	19	1	12.00	12	6	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	11.00	11	1	0	0	9	0	0	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGC................................................................................................................................	18	1	11.00	11	0	4	1	0	0	0	0	0	0	0	6	0	0	0	0	0	0
.........................................................................................................................................................TATTACATCAGGTACT...................................................................................................................................	16	1	11.00	11	0	0	0	0	0	0	1	1	0	1	8	0	0	0	0	0	0

droSec2

CCAT-------------------A-------------------GGGAAACA-------TTGCCGCGACGCACTG--AAGGATCGTCTGTAC------------------------------GATGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTGAAATCCAACAACCAGTACTTGTGTCATACTACGCCGTGCACGGATCGCACTAACCGCATGAC--------------------------------------------------------CAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	70889.00	70889	28364	9107	29244	4174
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	38237.00	38237	34053	1537	1830	817
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	20397.00	20397	16536	1925	1001	935
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	4605.00	4605	3896	315	101	293
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	2631.00	2631	2626	3	1	1
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	2341.00	2341	2253	24	48	16
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	2112.00	2112	1351	293	352	116
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	1285.00	1285	1283	1	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	829.00	829	592	194	20	23
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	394.00	394	292	62	19	21
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGC.......................................................................................	22	1	364.00	364	126	29	191	18
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	342.00	342	244	17	68	13
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	218.00	218	218	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	218.00	218	208	9	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	203.00	203	177	4	5	17
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	202.00	202	122	29	46	5
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	193.00	193	169	7	16	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	182.00	182	113	52	6	11
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	139.00	139	51	6	75	7
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	129.00	129	129	0	0	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACG........................................................................................	21	1	122.00	122	49	10	57	6
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	119.00	119	110	1	7	1
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	92.00	92	92	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	82.00	82	41	13	25	3
...........................................................................................................................TGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	20	1	81.00	81	16	46	8	11
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	62.00	62	61	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	59.00	59	18	19	16	6
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	55.00	55	55	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	51.00	51	20	9	18	4
..........................................................................................................................ATGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	21	1	50.00	50	0	41	2	7
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	43.00	43	37	0	2	4
.........................................................................................................................GATGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	22	1	41.00	41	0	38	1	2
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	40.00	40	35	2	2	1
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	34.00	34	19	0	14	1
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	31.00	31	31	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	30.00	30	23	1	5	1
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	28.00	28	28	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	26.00	26	18	3	5	0
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	24.00	24	23	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	19.00	19	17	0	1	1
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	18.00	18	18	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	18.00	18	18	0	0	0
..........................................................................................C------------------------------GATGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	23	1	17.00	17	1	13	0	3
.............................................................................................................................GAGC------AGCGTCTGTACGGT.......................................................................................................................................................	18	1	17.00	17	2	1	7	7
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	16.00	16	16	0	0	0
.......................................................................................................................................................AGTATTACATCAGGTACT...................................................................................................................................	18	1	16.00	16	15	0	0	1
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	15.00	15	4	3	4	4
................................................................................................................................................................................................AGTACTTGTGTCATACTACGC.......................................................................................	21	1	15.00	15	14	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	13.00	13	12	1	0	0
......................................................................................................................................................GAGTATTACATCAGGTAC....................................................................................................................................	18	1	12.00	12	12	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTG..................................................................................................................................	22	1	12.00	12	12	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	12.00	12	9	2	1	0
...............................................................................................................................................................................................CAGTACTTGTGTCATACTACGCA......................................................................................	23	1	11.00	11	7	0	3	1
............................................................................................................................GGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	19	1	10.00	10	10	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAAA.............................................................................................................................	26	1	9.00	9	4	0	3	2
.........................................................................................AC------------------------------GATGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	24	1	8.00	8	1	7	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTTA..............................................................................................................................	25	1	8.00	8	5	2	1	0
.......................................................................................................................................................AGTATTACATCAGGTACTGGTT...............................................................................................................................	22	1	8.00	8	8	0	0	0
.........................................................................................................................................................TATTACATCAGGTACTGGTT...............................................................................................................................	20	1	8.00	8	3	5	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGC................................................................................................................................	22	1	8.00	8	8	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACGT..................................................................................................................................	21	1	7.00	7	7	0	0	0
..........................................................................................................................................................ATTACATCAGGTACTGGTT...............................................................................................................................	19	1	7.00	7	6	0	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAT...............................................................................................................................	24	1	7.00	7	7	0	0	0
......................................................................................................................................................GAGTATTACATCAGGTACTT..................................................................................................................................	20	1	6.00	6	6	0	0	0

droYak3

GCCA-------------------T-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAT-----------------------------------------AGT----CAAAGCCATAGCCAAA

Size

Hit Count

Total Norm

Total

M026

Head

M043

Female-body

M056

Embryo

V046

Embryo

V052

Head

V058

Head

V120

Male-body

SRR1275488

Male larvae

SRR1275486

Male prepupae

SRR1275484

Male prepupae

GSM1528802

follicle cells

No Reads

droEre2

AGCA-------------------G-TCCG-------ACGAGTAGGGCATCA-------TTCCCGCGACGCAGTG--AAGGATCGGCTGTAC------------------------------GAAGGAGC------AGCGTCTGTACGGTTGAGTATTACATCAGGTACTGGTGTGCCTTAAAACCAACAACCAGTACTTATGTCATACTACGCCGTGCACGGATCGCACTAACCGCATG-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGT................................................................................................................................	23	1	231206.00	231206	36916	2383	2037	2690	27801	7982	151397
.....................................................................................................................................................TGAGTATTACATCAGGTACTGG.................................................................................................................................	22	1	70932.00	70932	62499	1985	290	339	3778	1920	121
.....................................................................................................................................................TGAGTATTACATCAGGTACTG..................................................................................................................................	21	1	35359.00	35359	27046	51	604	153	5224	2281	0
.....................................................................................................................................................TGAGTATTACATCAGGTACT...................................................................................................................................	20	1	8170.00	8170	6390	156	25	49	715	729	106
......................................................................................................................................................GAGTATTACATCAGGTACTGG.................................................................................................................................	21	1	4778.00	4778	4748	14	2	2	5	7	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGT................................................................................................................................	22	1	4599.00	4599	2933	12	5	13	84	34	1518
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTT...............................................................................................................................	24	1	3011.00	3011	1601	33	53	39	839	301	145
......................................................................................................................................................GAGTATTACATCAGGTACTG..................................................................................................................................	20	1	2119.00	2119	2116	0	0	0	1	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGT.................................................................................................................................	22	1	1220.00	1220	718	2	14	10	422	48	6
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGC................................................................................................................................	23	1	896.00	896	156	499	6	8	31	90	106
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGA................................................................................................................................	23	1	700.00	700	402	10	9	3	92	84	100
.....................................................................................................................................................TGAGTATTACATCAGGTAC....................................................................................................................................	19	1	505.00	505	309	38	8	1	58	74	17
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTA...............................................................................................................................	24	1	458.00	458	317	18	4	17	60	34	8
.....................................................................................................................................................TGAGTATTACATCAGGTACTT..................................................................................................................................	21	1	351.00	351	321	0	7	2	5	16	0
......................................................................................................................................................GAGTATTACATCAGGTACT...................................................................................................................................	19	1	338.00	338	333	0	0	0	0	0	5
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGG................................................................................................................................	23	1	321.00	321	199	5	0	7	11	54	45
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTG...............................................................................................................................	24	1	221.00	221	115	56	3	24	2	12	9
.......................................................................................................................................................AGTATTACATCAGGTACTGG.................................................................................................................................	20	1	211.00	211	210	0	0	0	1	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGC.......................................................................................	22	1	196.00	196	128	59	0	2	2	5	0
..........................................................................................................................................................ATTACATCAGGTACTGGT................................................................................................................................	18	1	195.00	195	34	15	1	14	45	48	38
......................................................................................................................................................GAGTATTACATCAGGTACTGGTT...............................................................................................................................	23	1	145.00	145	130	0	0	0	2	0	13
.......................................................................................................................................................AGTATTACATCAGGTACTGGT................................................................................................................................	21	1	141.00	141	121	0	0	3	1	2	14
.........................................................................................................................................................TATTACATCAGGTACTGGT................................................................................................................................	19	1	141.00	141	11	0	2	6	34	16	72
.....................................................................................................................................................TGAGTATTACATCAGGTA.....................................................................................................................................	18	1	119.00	119	21	0	2	0	68	28	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGA.................................................................................................................................	22	1	96.00	96	78	2	1	0	9	6	0
......................................................................................................................................................GAGTATTACATCAGGTACTGT.................................................................................................................................	21	1	88.00	88	86	0	0	0	1	1	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTC...............................................................................................................................	24	1	76.00	76	16	5	3	5	18	7	22
............................................................................................................................................................TACATCAGGTACTGGT................................................................................................................................	16	1	74.00	74	0	0	0	0	0	0	74
.....................................................................................................................................................TGAGTATTACATCAGGTACTGC.................................................................................................................................	22	1	71.00	71	48	15	0	0	7	1	0
...........................................................................................................................AGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	20	1	70.00	70	7	0	0	2	56	5	0
.........................................................................................................................................................TATTACATCAGGTACTGG.................................................................................................................................	18	1	68.00	68	35	3	0	1	2	27	0
.......................................................................................................................................................AGTATTACATCAGGTACTG..................................................................................................................................	19	1	65.00	65	65	0	0	0	0	0	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGG.................................................................................................................................	23	1	58.00	58	58	0	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTGG.................................................................................................................................	19	1	54.00	54	45	1	0	1	4	3	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGT..............................................................................................................................	25	1	53.00	53	15	4	3	1	21	9	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTA..................................................................................................................................	21	1	48.00	48	31	0	2	0	9	6	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGTG...............................................................................................................................	23	1	44.00	44	40	3	1	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACC...................................................................................................................................	20	1	41.00	41	4	36	0	0	0	1	0
........................................................................................................................................................GTATTACATCAGGTACTGGT................................................................................................................................	20	1	39.00	39	23	3	0	8	3	2	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTAA..............................................................................................................................	25	1	36.00	36	21	1	0	0	6	2	6
.....................................................................................................................................................TGAGTATTACATCAGGTACTTT.................................................................................................................................	22	1	33.00	33	29	0	0	3	1	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACGCT......................................................................................	23	1	32.00	32	17	5	0	1	2	7	0
......................................................................................................................................................GAGTATTACATCAGGTACTGGA................................................................................................................................	22	1	30.00	30	30	0	0	0	0	0	0
...............................................................................................................................................................................................CAGTACTTATGTCATACTACG........................................................................................	21	1	29.00	29	23	2	0	2	0	2	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTG..................................................................................................................................	22	1	28.00	28	28	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGAA...............................................................................................................................	24	1	28.00	28	11	0	2	0	14	1	0
....................................................................................................................................................TTGAGTATTACATCAGGTACTGGT................................................................................................................................	24	1	28.00	28	28	0	0	0	0	0	0
.............................................................................................................................GAGC------AGCGTCTGTACGGT.......................................................................................................................................................	18	1	25.00	25	1	0	0	1	20	3	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTC..................................................................................................................................	21	1	24.00	24	19	0	0	0	5	0	0
........................................................................................TAC------------------------------GAAGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	25	1	23.00	23	0	0	0	0	2	0	21
......................................................................................................................................................GAGTATTACATCAGGTACTGGTA...............................................................................................................................	23	1	22.00	22	22	0	0	0	0	0	0
.....................................................................................................................................................TGAGTATTACATCAGGTACTGGTGTGCCTTT........................................................................................................................	31	1	21.00	21	0	0	0	0	0	0	21
...........................................................................................................................................................TTACATCAGGTACTGGT................................................................................................................................	17	1	21.00	21	0	0	0	0	0	0	21
.....................................................................................................................................................TGAGTATTACATCAGGT......................................................................................................................................	17	1	18.00	18	0	0	0	0	0	0	18
.......................................................................................................................................................AGTATTACATCAGGTACT...................................................................................................................................	18	1	16.00	16	16	0	0	0	0	0	0
........................................................................................................................................................GTATTACATCAGGTACTG..................................................................................................................................	18	1	14.00	14	14	0	0	0	0	0	0
................................................................................................................................................................................................AGTACTTATGTCATACTACGC.......................................................................................	21	1	14.00	14	12	2	0	0	0	0	0
..........................................................................................................................AAGGAGC------AGCGTCTGTACGGT.......................................................................................................................................................	21	1	14.00	14	1	0	0	1	12	0	0

dps-mir-12

XL_group1a:978010-978083 +

Known

Unknown

intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-40.9	-40.0