ID:

sblock48653

 Coordinate:

chr2R:15518620-15518677 -

 Confidence:

Known Ortholog

 Type:

five_prime_UTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.7 -21.7 -21.4

Sense Strand Reads

CGATTGTCGTCGTCTCGCTCCCTCGTACGCATACGCATCGAGTTGTTGTTTGTTTGTTGTTTGTGTCTGTCCTCGCGTTTTGTTTGTGTACTGACAAAATAACAACAAAATAAAACCCGAAAGACTGCGAATAAGCATAAATAATAAACAACGAGACA
***********************************..(((.(((....((((((.(((((((.((((.((...((((.......)))).)).)))))))))))))))))....))).)))..************************************ 		Read size # Mismatch Hit Count Total Norm Total GSM609229
embryo 2-6hr
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 V077
cold, female head
 GSE24544
dcr-2[L811fsX] ovary total RNA
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 GSM609238
embryo 14-24hr
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 GSE24545
CS ovary total RNA
 GSM628272
ago2[414] ovary total RNA
 GSM628271
r2d2[1] ovary total RNA  
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 SRR298536
strain: vret148-60/TM6genotype/variation: Vret Heterozygote
 V0632
wt ovary AGO1-IP, reseq
AGO1
 SRR029633
total small RNAs from hen1 homozygous flies
 GSM609237
ago2[414] ovary total RNA
 V138
Male cold body
 V078
Desiccation, female head
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 GSM286607
6-10h #1 (10)
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1
 V137
Male aged head
 V139
Cold_female_body
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 GSM322543
male head #1
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1
 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR014280
Ovary_rep1_w1118_P
 V134
ML-DmD8 		V0662
r2d2 ovary, AGO1-IP, reseq
AGO1
 SRR031703
Total small RNAs from r2d2 homozygous flies
 SRR014271
Embryo_0-2hrs_rep1_w1118_0_2hr_Emb
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 V125
ML-DmD9		 GSM609232
r2d2[1] ovary total RNA  
 SRR001349
heterozygous_dcr-2_untreated
 GSM609234
CS  male total RNA  
 SRR031692
Total small RNAs from Oregon R
 V080
Starvation, female head
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 GSM609223
male, one day
 V127
G2		 V079
Oxidation, female head
 GSM609225
ML-DmBG3-C2		 S6
0-1,2-6,6-10h embryo
 SRR001664
homozygous_dcr-2_untreated
 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 GSM609236
dcr-2[L811fsX], ovary, AGO1IP
AGO1
 V132
ML-DmD32 		V030
ML-DmD8 cell		 GSM609224
female, one day
 SRR060645
yw67c23(2)_testes_total
 GSM609240
IR+ 2-18hr
 SRR014281
Ovary_rep1_wK(fem)_x_w1118(male)_F1
 SRR341118
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 V092
dcr-2[G31R] male total RNA  
 V136
Male aged body
 V073
mbn2 		SRR001347
ago2_untreated
 V086
female body, aged
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 GSM379054
Flam Heterozygote
 GSM286605
2-6h #1 (8)
 GSM399106
female body #2
 GSM399110
KC-48 #2
 SRR014276
Ovary_rep1_NA(fem)_x_Har(male)_F1
 SRR065800
zuc_H-Y_ovaries
 GSM609239
IR- 2-18hr
 SRX247212
AGO1-IP from S2-R+, FLAG-HA-AGO2
AGO1
 V141
Heat_female_body
 V142
Oxidation_female_body
 V074
S3		 V146
S1 cell		 SRR031699
Total small RNAs from dcr-2 homozygous flies
 GSM343287
Drosophila Toll 10b mutant embryos
 GSM379065
Zuc Heterozygote
 GSM322533
female head #1
 GSM399107
male body #2
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 SRR060648
A2_ovaries_FLAG-Aub
 SRR065806
Piwi-IP_squ_mut_ovaries
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 V129
ML-DmBG1-c1		 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2
 GSM385821
OSS_s7		 GSM609230
CS,ovary,AGO1IP
AGO1
 GSM275691
imaginal disc
 V140
Dessication_female_body
 GSM280083
dcr-2-/- ovaries (18-29nt)
 GSM379056
Krimp Heterozygote
 GSM379057
Krimp Mutant
 GSM379062
Squ Mutant
 GSM385744
OSS_s2		 GSM360262
0-2d pupae
 GSM609242
s2+48 #2
 SRR001338
IR_non-beta-eliminated
 SRR001345
ago2_non-beta-eliminated
 SRR010955
Aub IP in Ago3 heterozygotes
 SRR014279
Ovary_rep1_w1118(fem)_x_wK(male)_F1
 SRR060643
A2_testes_total
 SRR060653
hs-Penelope_ ovaries_total
 SRR065803
Piwi-IP_zuc_het(mut)_ovaries
 GSM609247
heat female head
 V034
ML-DmD16c3 cell		 GSM609231
ago2[414], ovary, AGO1IP
AGO1
 V130
ML-DmBG3-c2 		V131
ML-DmD16-c3 		GSM399100
Kc167 cell		 GSM399101
kc167 cell		 GSM609222
ML-DmBG1-C1		 GSM379066
Zuc Mutant
 SRR001341
WT_males_non-beta-eliminated
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1
 V128
S3 		V012
Dcr2 male (Katsutomo, whole fly?)
 V032
S1 cell		 GSM180328
adult heads (female heads, male heads)
 GSM180331
early embryo (2-6)
 GSM180332
mid embryo (6-10)
 GSM180335
imaginal discs
 GSM379051
Armi Mutant
 GSM379052
Aub Heterozygote
 GSM379059
Piwi Mutant
 GSM379060
SpnE Heterozygote
 GSM379063
Vasa Heterozygote
 GSM286611
6-10h #2 (11)
 GSM360257
1st instar #2
 GSM360260
0-1d Pupae (w)
 GSM286602
male body
 GSM609244
KC+48 #2
 GSM364902
12-24hr embryo
 SRR010957
Aub IP in Ago3 trans-heterozygotes
 SRR014269
Embryo_0-2hrs_rep1_LK_0_2hr_Emb
 SRR014273
Ovary_rep1_Har_P
 SRR014282
Ovary_rep1_wK_P
 SRR031696
Ago1-associated small RNAs from Oregon R
AGO1
 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 SRR060644
A2_ovaries_total
 SRR065154
Piwi bound piRNAs from tj GAL4 > RNAi-zuc ovaries
 SRR065801
zuc_het(H-Y)_ovaries
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 V015
DreRFHV148h
 GSM343832
S2R+ cell		 V022
ML-DmD32 cell		 V023
Dcr2 female head
 GSM609221
1182-4H cell		 GSM609250
ML-DmD32 cell		 V085
CME W2 wing disc		 V096
loqsKO/f00791 ovary
 V145
S2-DRSC		 V147
1182-4H cell		 GSM385748
OSS_s6		 SRR001348
ago2_oxidized
 V003
dsDcr-1 (katsutomo RNA)
 SRR341117
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 GSM609217
MLDmD20c5		 GSM609251
aged female head
 V037
Felix sample +mirtrons
 GSM371638
S2-NP		 V008
S2-DRSC		 GSM609227
CMEW1 Cl.8+ cell		 SRR065802
Piwi-IP_zuc_mut_ovaries
 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 GSM343833
S2R+ cell
..................................................TGTTTGTTGTTTGTGTCTGTCCTC.................................................................................... 24 0 1 486.00 486 56 44 38 23 23 30 25 17 15 14 13 9 13 7 11 5 1 10 2 5 3 2 1 4 1 0 0 3 0 7 4 7 0 8 4 4 1 0 0 2 0 3 1 2 3 2 2 3 0 2 2 5 2 3 0 2 0 0 0 1 0 0 1 0 1 3 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 1 3 0 1 0 0 0 0 1 0 0 2 0 2 0 0 0 0 1 0 0 1 0 0 1 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTCC...................................................................................... 22 0 1 146.00 146 1 3 2 11 12 4 2 6 8 7 8 5 4 8 2 0 0 1 2 3 5 0 0 5 5 0 0 2 0 2 4 0 0 0 2 1 4 0 0 0 0 4 0 2 2 1 0 1 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTCCT..................................................................................... 23 0 1 139.00 139 9 12 4 8 9 6 8 6 6 9 5 4 4 3 1 0 0 3 3 3 0 6 1 0 2 0 0 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 2 1 1 1 0 0 1 1 0 0 2 0 2 1 0 0 0 0 0 0 2 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTC....................................................................................... 21 0 1 95.00 95 1 3 1 7 4 1 2 3 3 4 3 4 1 0 0 1 0 1 2 3 2 0 0 2 2 2 0 0 3 2 1 0 0 0 2 0 4 0 0 0 0 1 0 0 0 0 1 0 0 2 2 0 2 0 2 1 2 1 0 0 0 0 0 0 0 0 0 0 1 1 1 0 2 1 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGT........................................................................................ 20 0 1 36.00 36 0 1 0 1 0 1 1 1 0 1 0 1 2 0 1 1 1 1 0 0 0 0 2 1 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GTACTGACAAAATAACAACA................................................... 20 0 1 28.00 28 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 5 0 0 5 3 2 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GTACTGACAAAATAACAACAAA................................................. 22 0 1 26.00 26 0 1 0 0 1 1 0 2 2 0 0 0 0 1 0 3 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 2 0 2 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GTACTGACAAAATAACAACAA.................................................. 21 0 1 12.00 12 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTTCTC.................................................................................... 24 1 1 11.00 11 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGGC....................................................................................... 21 1 1 8.00 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAGTACTGACAAAATAACAACA................................................... 22 2 1 7.00 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGGCCTC.................................................................................... 24 1 1 6.00 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTG......................................................................................... 19 0 1 5.00 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTCCTCG................................................................................... 25 0 1 5.00 5 1 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTTTCCTC.................................................................................... 24 1 1 4.00 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTTC...................................................................................... 22 1 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTCCTCGC.................................................................................. 26 0 1 4.00 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCT.......................................................................................... 18 0 1 4.00 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TACGCATCGAGTTGTTGTTTGT......................................................................................................... 22 0 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTCCTT.................................................................................... 24 1 1 4.00 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGGCCCC.................................................................................... 24 2 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTACTGACAAAATAACAACA................................................... 20 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGGCC...................................................................................... 22 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTTGTTGTTTGTGTCTGTTCT..................................................................................... 23 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.......................................................................................GTACTGTCAAAATAACGACT................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCTAACAGCAGCAGAGCGAGGGAGCATGCGTATGCGTAGCTCAACAACAAACAAACAACAAACACAGACAGGAGCGCAAAACAAACACATGACTGTTTTATTGTTGTTTTATTTTGGGCTTTCTGACGCTTATTCGTATTTATTATTTGTTGCTCTGT
************************************..(((.(((....((((((.(((((((.((((.((...((((.......)))).)).)))))))))))))))))....))).)))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM609222
ML-DmBG1-C1		 V073
mbn2 		V0632
wt ovary AGO1-IP, reseq
AGO1		 SRR029633
total small RNAs from hen1 homozygous flies
 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2		 V0642
ago2 ovary, AGO1-IP, reseq
AGO1		 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 SRR031692
Total small RNAs from Oregon R
 V077
cold, female head
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 SRR029608
total small RNAs from hen1 heterozygous flies
 GSM609234
CS  male total RNA  
 GSM609238
embryo 14-24hr
 V086
female body, aged
 GSM280084
loqs-/- ovaries (18-29nt)
 GSM467729
Dmel_wt_sRNAseq
 GSM467731
Dmel_loq_sRNAseq
 GSM286611
6-10h #2 (11)
 SRR010954
Aub trans-heterozygotes, oxidized
 SRR341118
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 V032
S1 cell		 SRR031703
Total small RNAs from r2d2 homozygous flies
 GSM609237
ago2[414] ovary total RNA
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1		 V074
S3		 V091
fGS/OSS total  		 GSM399110
KC-48 #2
 SRR001339
WT_females_non-beta-eliminated
 SRR014276
Ovary_rep1_NA(fem)_x_Har(male)_F1
 V006
r2d2 female: possibly heterozygous
 GSM628272
ago2[414] ovary total RNA
 V079
Oxidation, female head
 GSM609230
CS,ovary,AGO1IP
AGO1		 SRR031698
2'-O-methylated small RNAs from dcr-2 heterozygous flies
 GSM609225
ML-DmBG3-C2		 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 V003
dsDcr-1 (katsutomo RNA)
 GSM609223
male, one day
 SRR010953
Aub heterozygotes, oxidized
 GSM609232
r2d2[1] ovary total RNA  
 SRR001349
heterozygous_dcr-2_untreated
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 SRR060652
hs-Penelope_testes_total
 V080
Starvation, female head
 GSM609224
female, one day
 V137
Male aged head
 SRR001347
ago2_untreated
 GSM609236
dcr-2[L811fsX], ovary, AGO1IP
AGO1		 SRR065155
Piwi bound piRNAs from tj GAL4 > RNAi-fs(1)Yb ovaries
 GSM385822
OSS_s8		 V034
ML-DmD16c3 cell		 V037
Felix sample +mirtrons
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1		 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1
.................................................................................................TTTTTGTTGTTTTATTTTGGG........................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CGAGGGAGCATGCGTATGC........................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CTACCAGCTGCAGAGCGAGAGA....................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTTTTATTTTGGGGTTTCT.................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GCAGGCAGGAGCGCAAAGCAA.......................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CTAACAGGGGCAGAGCGAGGG........................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGTTTTATTTTGGGCTTGCT.................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TGTTTTATTGTTGTCTTACTTTG.......................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AACAAACACAGACAGGAGCGCAA............................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CTGACAGCAGCAGAGCGAGAGAA...................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CGGGAGAGCATGCGCATGCGT......................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CAGGAACAGAGCGGGGGAGCAT................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AGGGAGCATCCGTATTCGTAGA...................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCCGAGCGAGGGAGCATC.................................................................................................................................. 18 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GGAGCATGCGTATGCGTAGCT..................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACGGCAGCAGAGCGCGGGGGC..................................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GCATGCGTATGCGTAGCT..................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTTGTGTTATTCTGGGCT...................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GCATGCGTATGCGTAGCTCAA.................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CTGACAGCAGCCGAGCGAGGGA....................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GCTAGCAGGGGCAGAGCGAGGG........................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CTCATCAACAAAGAAACAAC................................................................................................... 20 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AAGCAGAGCGAGGGCGCAT................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CTAACAGGGGCAGAGCGAGGGT....................................................................................................................................... 22 3 3 0.67 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TCACAGCGGCAGTGCGAGGGA....................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTTGTTTTATCTTGG......................................... 17 1 6 0.50 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TATTCGTATTTATTATTAGTTT...... 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GCACATGACTGTTTGATAGT...................................................... 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTAGGTTTATTTTGGGC....................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................CCAAGACAGACGGGAGCGCAA............................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GGGTTGTTTTATTTTGGGCTT..................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................ATGCTTATGCGAAGCTCCACA................................................................................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTTTTTTGGTTGTTTTATCTTGG......................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ATGGTTGGTTTATTTTGGGC....................................... 20 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GCTAACAGGGGCAGAGCGAGGA........................................................................................................................................ 22 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CTTATTCGTAGTTATTATATG......... 21 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GCAATCAGGAGCAGAGCGAGGG........................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GCTCCCAGCGGCAGAGCGAGGG........................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CACCAGAGCGATCGAGCATG.................................................................................................................................. 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............AGCTAGGCAGCATCCGTATG............................................................................................................................ 20 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TCAAACAGCGGCAGAGCGAGGG........................................................................................................................................ 22 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCGGCAGAGCGAGGGAG...................................................................................................................................... 18 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AGCATGTGTTTGCGTAGGTCA................................................................................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CAAAGCGAGGGAGCGTTCGTA.............................................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TTCAGCAGCAGAGCGAGGG........................................................................................................................................ 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AGGGCGAGCGAGCAGGCGTAT............................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AACCCAGACAGGAGCGCTATA............................................................................. 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GTTTGGGCTTTCTGACCCAT........................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GCGTAGCCCAACAAAAAGCAA........................................................................................................ 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGTTTCATATTGGGCTTGCT.................................. 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TGTTTCTGACGCTTATTCG...................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AGACAGGAGCGCAACCCAAAG........................................................................ 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GGACTGTTTTACTGTTGTTTT................................................ 21 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GCGCGAGGGAGCAGGCGTA.............................................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................AGCTGAACAAGAAACAAACA..................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ACACATAGGAGCGCCAAACAA.......................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...ATCAGGAGCAGAGCGAGGG........................................................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTCTTATGGTTGTTTTATCTTG.......................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTGGTTTTATTTTGGGCCAT.................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...AACAGGGGCAGAGCGAGGG........................................................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CCACCAGCGGCAGAGCGAGGG........................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGCGCATAGTCGTATTTATTA............. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TATGCGTAGCTGAACAACAGT........................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TCGCGTATGCGTAGCTCAA.................................................................................................................. 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AAGCAGCTGAGCGAGGGAGCG.................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TATGGTTGTTTTATTTCGGACT...................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGACACAGACAGGAGCGGAAA.............................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TGACAGCAGCAGAGCGAGAGAA...................................................................................................................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCAGCAGACTGAGGGAGTA.................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGTATTCATGATTTGTTG...... 19 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CAAGCAGGAGCAGAGCGAGGG........................................................................................................................................ 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTTTTTTGGTTGTTTTATCTTG.......................................... 22 3 18 0.22 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TTTGTTTTATTTGGGGCTTGCT.................................. 22 3 10 0.20 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................ATTGTAGTTTTATTTTGGGT....................................... 20 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTTTTATTTTGGGGTTGCT.................................. 20 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TATGGTTGTTTTATCTTGG......................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATAGTTTTATTTTGGGGTTTCT.................................. 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AACAAACTCAGACAGGAACGT................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TCAGCCGCAGAGCGAGGG........................................................................................................................................ 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ACAAACAAACAACAAACACACT.......................................................................................... 22 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CAGACAGTTGCGCAAAATAAA......................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TTGGGGTTTCTGATGCTTGTT........................ 21 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTTTTTTTGTTGTTTCATTTTG.......................................... 22 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ACAGACAGGACGGCAAAACAG.......................................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTTCTATTATTTTGGGGTTTCT.................................. 22 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................ACAAGAAACAAAGACAGGAGT................................................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................GCTCAACAACAAACGCACA..................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......AGCTGCAGATTGAGGGAGC..................................................................................................................................... 19 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACAGGTGCAGAGCGAGGG........................................................................................................................................ 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.CTAATAGGGGCAGAGCGAGGG........................................................................................................................................ 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TTATTATGTGCTTTCTGACGA............................. 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCAGCAGACCGAGGGAA...................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GGGAGGAAGCATGCGTATC............................................................................................................................ 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTTGTCTTTTTTGGGGCTTTCT.................................. 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACAGTGGCAGAGCGAGGG........................................................................................................................................ 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................CGTAGCACAAGAACAAACACA....................................................................................................... 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ATTTGTTTTATTTTGGGGTTTCT.................................. 23 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GCGTAGGTCAACATGAAACAA........................................................................................................ 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTTGTCTTTTTTTGGGGTTTCT.................................. 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...AACAGCTGCCGAGCGAGAGAG...................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TCTTTTATTGTTGTGTTATT............................................. 20 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CACAACACCAAAAAAACAACAAAC............................................................................................... 24 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACAGCAGCCGATCGAGGGAA...................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............AGAGGGAGGGGGGATGCGTA.............................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CAAAGACAGGAGCGCAAG.............................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AGTGTCGTTTTCTTTTGGGCT...................................... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CGCAGAGCGAGGGAGCGT................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ATTGTAGTTTGGTTTTGGGCT...................................... 21 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCTGCAGAATGAGGGAGC..................................................................................................................................... 19 3 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGTATTATTTTGGGGTTGCT.................................. 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GCAGCATAGCGAGGGAGA..................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................GGTATGCGTAGCTCCAAAA............................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TGGTTGTTATATTTTGGGGTT..................................... 21 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTATTGTTGTTTTATTTTA.......................................... 19 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............AGCGACGGAGTATGCGTA.............................................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................ACATGACTGCTTGATAGT...................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
.............................................................................ATTTCAAACACATGACTGTTT............................................................ 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAACAAACAAAGAAAGGAG.................................................................................... 19 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTATGGTTGTTTTATCTTG.......................................... 19 2 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTTTTATTTTGGGGTTACT.................................. 20 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTGTTGTAGTTTGATTTTGGG........................................ 21 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTTGGTTGTTTTATTTTGG......................................... 19 2 20 0.10 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GGGTGAGGGAGCAGGCGTAT............................................................................................................................. 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CACATGAATGTTTTGTTGT...................................................... 19 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GCTAGGGATCATCCGTAT............................................................................................................................. 18 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0
......AGCAGCAGATTGGGGGAGC..................................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTCTTTAATTTTGGGCTGTCT.................................. 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................TTGGGGTTTCTGATGCTT........................... 18 2 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CGTATGCGAAGCGCTACAA............................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TGGTTGTTTTATCTTGGG........................................ 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TGCGTAGCCCAAAAAAAAACA......................................................................................................... 21 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TAGTTTTATTTTGGGCTTGCA.................................. 21 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GCTTCATTTTCGGCTTTCTG................................. 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................ACAAATAACAAACGCAGACAT....................................................................................... 21 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CAGACAAGAGCGCTAAAAAAA......................................................................... 21 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGAAACACATGACTGTTT............................................................ 18 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CTAACAGCAGCCTAACGAG.......................................................................................................................................... 19 3 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGTTTTATATTGGGGTTACT.................................. 21 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GCCAGGGAGTATGCTTAT............................................................................................................................. 18 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CAGCAGTGAGAGGGAGCCT................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................AGCGCAAAACTGACATATG................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTTTTATTTTTGGCTTGCTGA................................ 21 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGTCGCATATTCTTATTTATT.............. 21 3 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................AACAACAAACAAGCAACA.................................................................................................. 18 1 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................AACTCAAAAACAAACCAACAAC................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTCATATTGGGCATTCTG................................. 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TAAAAGGAGAAGAGCGAGGG........................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GGAGCGCAAAACAATCCT...................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTTGTTTTAGATTGTGCTTT.................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGTTTTATTTTGGGGTTACA.................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTGTTTTAGTTTGGGGTTGCT.................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTTGTGTTAGTTTGGTCTTT.................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGTGTCTATTATTTTTTGCT.... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................GGTTGTTTTATTTTGGGATG..................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TGTGTTATTGTTGTATTAT.............................................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................GCCAAAACAGACACATGACT................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCATTTAGGGCTTTGT.................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATAGGAGCGGAAAACAATC........................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGCAGCAGAGTGGGCGAGC..................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................TGACGTTTATTCATATTT................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CAGCAGTGCGATGGAACA.................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCAATTTGGGCCTTC................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTTGTTTTATCTTGGGCTGC.................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTGTTTTATTCTTGTTTAA............................................... 19 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATTCGTATTTTTAATATGTTG...... 21 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AAACGGACAGGAGCGCCAAA............................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTAGTTTGGTTTTGGGCTT..................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTGTTGTTTTATTTTG.......................................... 19 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CCATCAATCACAGACAGGA..................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTTGTTTTATCTTGGTGTT..................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTTGTTTTATCTTGGC........................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................ATGACTGTTTTATAGTGGA................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dm3 chr2R:15518570-15518727 - sblock48653 CGATTGTCGTCGTCTCGCTCCCTC--GTACGCATACGCATCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGTGTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAATA-----AAACCCGAAAGACT--GCGAATAAGCATAAATA---------ATAAACAAC--------------GAGACA
droSim2 2r:16165598-16165755 - CGATTGTCGTCGTCTCGCTCCCTC--GTACGCATACGCATCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGTGTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAATA-----AAAGCCGAAAGACT--GTGCATAAGCATAAATA---------ATAAACAAC--------------GAGACA
droSec2 scaffold_1:13033206-13033361 - CGATTGTCGTCGTCTCGCTCCCTC--GTACGCATACGCATCGAGTTGT----TGT----TTGTTGTTTGTGTCT------------------------AT--------------------------------------------------------------GTCCTCG------CGTTTTGTTTGTGTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAATA-----AAAGCCGAAAGACT--GTGCATAAGCATAAATA---------ATAAACAAC--------------GAGACA
droYak3 2R:13655635-13655828 + CGATTGTCGCCGTCTCGCTTCCCC--GTACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCTCTC--TCTCTCCC--CGTCTCC----------------CTGTCAAACTCTCG-CC---GCCGTCG------CGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCAAAAAGACT--GCGAATAAGCATAAATA---------ATAAACAAC--------------GAGACA
droEre2 scaffold_4845:9716919-9717110 - CGATTGTCGCCGTCTCGCTCCCCC--GTACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCT----CTCTCTCCC--CGTCTCC----------------CTGTCACACTCTCG-CC---GCCGTCG------CGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCCGAAAGACT--GCGAATAAGCATAAATA---------ATAAACAAC--------------GAGACA
droEug1 scf7180000409474:2432993-2433193 + CGATTCTCGTTGTCTCGTTCCCCC--TCACGC------AGCGATTT-------GTTTGTTTGTTGTTTGTGTCT------------------------GACGCT----CTCTCGCCC--CGTCTCTGTCGCT----------CTCTCACTCTCTTGCCC---GCCGTCG------CGCTTTGTTTGTGTACTG-AAAAGAGTC----------------------------------------------A------GCAACAAAATATAAAAAAATCCAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACA
droBia1 scf7180000302143:3016581-3016773 - CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGCTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCACT----CTCTCGCCC--CGTCTCT------------------CTCCCTCGCCCGCCC---GCCGTCG------TGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCCAGGCGACT--GCGAA-AAGCATAAATA---------ATAAACAAC-----------GACGAGACA
droTak1 scf7180000415384:139531-139721 + CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GACACT----CTCTCGCCC--CGTCTCT------------------CTCACTCTCTCGCCC---GCCGTCG------CGATTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCCAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACA
droEle1 scf7180000491201:1971124-1971317 - CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCTCACTCTCTCTCCC--TGTCT------------------------CGCTCTCG-CC---GCCGTCGCGTTTGCGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAAAT-----AAAGCGAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACA
droRho1 scf7180000780066:116186-116379 + CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCTCACTCTCTCTCCC--TGTCT------------------------CTCTCTCG-CC---GCCGTCGCGTTTGCGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCTAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACA
droFic1 scf7180000454039:810005-810146 - CGATTG-----------------------------------------------------------TTTGTCTCT------------------------GTCGCT----CTCACTCAC--CGTCTCG----------------------CTCTTTCGCCCGCCGTCGTCG------CGTTTTGTTTGTGTACCG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCTAAAAGACT--GCGAA-AAGCATAAATA---------ATAAACAAC--------------GAGACA
droKik1 scf7180000302679:53615-53819 - CGATTCTCGTTGTCTCGCTCGCTCTCGCACACGCACGCAGCGAGTTGT----TGTTTATCTGTTGTCTCCCTCT------------------------C--------------------------TCTCTTTCCCTCCCTCTCTGGCAG-TTTGCG-TC---GCCGTCG-------GTTTTGTTTGTGTACTG-AAAAGAAGCAGCAGAAACG---------GCAGCA------------------------------AACAAAATA-----AAAACCC-AAGACT--GCGAA-AAGCATAAATA---------ATAAACAAC--------------GAGACA
droAna3 scaffold_13266:9761121-9761346 + CGATTCTCGTCGTCCCGCTCGCTC--TCACGCGC-----TCTTGTTGC----TGTTTGTTTGTT---TG--T--------------------------------------------------------------------------------CTCG-CCGCCGACGTCG------CGTTTTGTTTGTGTACTG-AGAAGAAGCAG-AAAAACATCAGCAGTGGCAGTGGCAGTGGTAGGTGGAAGTGGCAGTGGCAACAACAAAATACTGCAATAGC---AAGACT--GCAAAAAAAAATAACAACAAATTTTTATAAACAAA-------TAACGTGGCGACA
droBip1 scf7180000396427:909641-909841 + CGATTCTCGTCATCCCGCTCGCTC--TCACGCGC-----TCTTGTTGC----TGTTTGTTTGTT---TG--T--------------------------------------------------------------------------------CTCG-CCGCCGACGTCG------CGTTTTGTTTGTGTACTG-AGAAGAAGCAG-AA-AACATCAGCAGTGGCAGTGG-------------------CAGTGGCAACAACAAAATACTGG-ATAGC---AAGACTCGGCAAA-AAAAATAACAA--AAT---TATAAACAAA-------TACTGTGGCGACA
dp5 3:12644921-12645150 - CGATTCTCGTTGTCCCGCTCGCAC--GCACGCACG-----TTGGTT-CTGTT--CTTGTTTGTT----GTGTCTCGCCACAGTCGTCGTCGCCGTCGA-------------AGTCCCAGCGTCGCT------------------GTCGCT---------GTCGCCGTCG------CGTTTTGTTAGTGTGTTTGTGTATGTGTGG-AA-AAGGGCCGCCGCGGCAGAGA-------------------AA------GCAACAAAAGA-----A------GGAGACT--GTGGAAAATAGTAAATA------------AACCAGGTGCCGCCGCTTT-AGGACA
droPer2 scaffold_2:8937432-8937667 + CGATTCTCGTTGTCCCGCTCGCAC--GCACGCACG-----TTGGTT-CTGTT--CTTGTTTGTT----GTGTCTCGCCACAGTCGTCGTCGCCGTCGA-------------AGTCCCAGCGTCGCT------------------GTCGCTGTCGCT---GTCGCCGTCG------CGTTTTGTTAGTGTGTTTGTGTATGTGTGG-AA-AAGGGCCGCCGCGGCAGAGA-------------------AA------GCAACAAAAGA-----A------GGAGACT--GTGGAAAATAGTAAATA------------AACCAGGTGCCGCCGCTTT-AGGACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dm3
CGATTGTCGTCGTCTCGCTCCCTC--GTACGCATACGCATCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGTGTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAATA-----AAACCCGAAAGACT--GCGAATAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTC...............................................................................................................................................................................241486.0048600000000100000000000000000000000000001001020010021010000000000000000000000000000003021000000000100000000000000013000000000001000000000000000000801000010701000000000000500000100000000000011000030000000000110000000007412445433013231500000000120010000000010101000000020000000001103217170010238223562523010911320000101423103001250401410100001100
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCC.................................................................................................................................................................................221146.0014600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000010200000000000000000000000000000000001010000000000000000000000008201331544128000000001000000000000000001000000000001000020206000010022141221000508000001071140202001040151510100000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCT................................................................................................................................................................................231139.001390000000100000000000000000000000000000000200000000000000000000000000000000000000000006000000000000000010000000000110000000000000000000000000000000000000002000000000000000000000000000000001002000000000000000000000000300012320649600010000100000000000000000000000000000000001111601000014310980010040500000119800200001000003200100000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TC..................................................................................................................................................................................21195.0095000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002200000000000031000010000200000000000200000000000101000000000002123302114300010000110000000000000000000000020001000000002300000111201120000040300000004740001000010021212100110
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------T...................................................................................................................................................................................20136.0036000000000000000000000000000000000002001000010000000000000000000000000000000000000000000000000000010000000000000000000000100000000200000000000000000000000000000000000001000000000000000000200000000000000000000000000002011000120000000000000000000100000000000000010000000011000100000010000010001011000000001100000000020111001000000
...........................................................................................................................................................................................GTACTG-ACAAAA--T----------------------------------------------A------ACAACA.................................................................................20128.0028000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001100000300000000000000000000000000100000000000000000000000000000000000013010001010501000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................GTACTG-ACAAAA--T----------------------------------------------A------ACAACAAA...............................................................................22126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000002200000000000000000000000000000000000003020001000001000000100000000000000000000000000010001022101200010000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GTACTG-ACAAAA--T----------------------------------------------A------ACAACAA................................................................................21112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000011020002010100000000000000000000000000000000000000000000100100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------....................................................................................................................................................................................1915.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000100000000000000000000000000010100000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------........................................................................................................................................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000110000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------C.......................................................................................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000001100000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------.....................................................................................................................................................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000
.................................TACGCATCGAGTTGT----TGTTTGT............................................................................................................................................................................................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTT...............................................................................................................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCA.................................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
..........................................................TTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCT................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCT.................................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000
......................................................................................................................................................................................................................................................................AAATA-----AAACCCGAAAGACT--GC.....................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGTGTACTG-.....................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACGCATACGCATCGAGTTGT----T..................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------CG......................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TA-----AAACCCGAAAGACT--GCGAATAAGCAT...........................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCT................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................GTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTC...............................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000
.......................................................................TCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGTGT..........................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000
.......................................................................TCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTTG.............................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TG..................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCCT...............................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TA-----AAACCCGAAAGACT--GCGAATAAGCA............................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCT------TT......................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------CGT.....................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CCCGAAAGACT--GCGAATAAGCATAAA........................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TAAGCATAAATA---------ATAAAC.......................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAAATA-----AAACCCGAAAGACT--GCG....................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................G------CGTTTTGTTTGTGTACTG-AC...................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTAA------A.......................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................TACTG-ACAAAA--T----------------------------------------------A------ACAACAA................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTA...............................................................................................................................................................................2411.001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTT...............................................................................................................................................................2011.001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAT..............................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GT----TGTTTGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCC.................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TA..................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------G...................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAA..............................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTT...............................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCT------........................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..............................GCATACGCATCGAGTTGT----TG.................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................AAA--T----------------------------------------------A------ACAACAAAATA-----AAACCCGAAAGAC..........................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTCG------CGTTTTGTTTGTGTACTG-A....................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................TTTGTTTGTTGTTTGTGTCT------------------------.....................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GTGTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGT................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................ACCCGAAAGACT--GCGAATAAGCATAAA........................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ATA-----AAACCCGAAAGACT--GCGAA..................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................GTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTT..............................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGTCGTCGTCTCGCTCCCTC--.............................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAAGACT--GCGAATAAGCAT...........................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGTGTACTG-ACA..................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AACCCGAAAGACT--GCGAATAAGCATA..........................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................GTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------T...................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TA-----AAACCCGAAAGACT--GCGA...................................................2011.001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGT............................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCTC................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGCATACGCATCGAGTTGT----TG.................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................CCCGAAAGACT--GCGAATAAG..............................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.........................................................................................................................................................................................................................................................................................................CATAAATA---------ATAAACAAC--------------GAGA..2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CGAAAGACT--GCGAATAAGCAT...........................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TAA.................................................................................................................................................................................2220.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GTTGT----TGTTTGTTTGTTGT.....................................................................................................................................................................................................................................................................................1930.331000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TTT.................................................................................................................................................................................2240.251000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
droSim2
CGATTGTCGTCGTCTCGCTCCCTC--GTACGCATACGCATCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTCG------CGTTTTGTTTGTGTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAATA-----AAAGCCGAAAGACT--GTGCATAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCT................................................................................................................................................................................23113.001320900001001000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TC..................................................................................................................................................................................2119.00921300000000102000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCC.................................................................................................................................................................................2219.00921100030002000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTC...............................................................................................................................................................................2417.00710300002000100000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------T...................................................................................................................................................................................2013.00301000000000002000
.....................................................GTTTGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TC..................................................................................................................................................................................2412.00200200000000000000
...........................................................................................................................................................................................GTACTG-ACAAAA--T----------------------------------------------A------ACAACAAA...............................................................................2211.00110000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCC................................................................................................................................................................................2311.00110000000000000000
...................................................................................................................................................................TCCTCG------CGTTTTGTTTGTGTACTG-ACA..................................................................................................................................................2711.00101000000000000000
..............................................GT----TGTTTGTTTGTTGTTTGTGTC..............................................................................................................................................................................................................................................................................2311.00101000000000000000
..........................................................TTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCC................................................................................................................................................................................2111.00110000000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCT.................................................................................................................................................................................2211.00110000000000000000
.....................................................................................................................................................................................................................................................................................CGAAAGACT--GTGCATAAGC.............................................1911.00101000000000000000
.............................................TGT----TGTTTGTTTGTTGTTTGTG................................................................................................................................................................................................................................................................................2211.00100000000001000000
................................ATACGCATCGAGTTGT----TGTTTGTTTGT........................................................................................................................................................................................................................................................................................2711.00100010000000000000
........................................................TGTTTGTTGTTTGTGTCT------------------------G----------------------------------------------------------------TCCTT...............................................................................................................................................................................2411.00100000000000100000
.......................................................................................................................................................................CG------CGTTTTGTTTGTGTAC........................................................................................................................................................1811.00100001000000000000
......................................................................................................................................................................................................................................................................AAATA-----AAAGCCGAAAGAC..........................................................1811.00110000000000000000
........................................................................................................................................................................................................................................................................ATA-----AAAGCCGAAAGA...........................................................1520.50100000001000000000
.......................................................TTGTTTGTTGTTTGT.................................................................................................................................................................................................................................................................................15200.05100000010000000000
droSec2
CGATTGTCGTCGTCTCGCTCCCTC--GTACGCATACGCATCGAGTTGT----TGT----TTGTTGTTTGTGTCT------------------------AT--------------------------------------------------------------GTCCTCG------CGTTTTGTTTGTGTACTG-ACAAAA--T----------------------------------------------A------ACAACAAAATA-----AAAGCCGAAAGACT--GTGCATAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................AT--------------------------------------------------------------GTCCTCG------CGTTTTGTTT..............................................................................................................................................................1911.0010010
..............................................GT----TGT----TTGTTGTTTGTGTCT------------------------AT--------------------------------------------------------------GTCC.................................................................................................................................................................................2611.0011000
.......................................................................................................................................................................................................................................................................................................AGCATAAATA---------ATAAACAAC--------------GAGA..2311.0010010
.............................................TGT----TGT----TTGTTGTTTGTGTCT------------------------AT--------------------------------------------------------------GTCC.................................................................................................................................................................................2711.0011000
....................................................................................................................................................................................................................................................................................................ATAAGCATAAATA---------ATAAACA......................2011.0010010
droYak3
CGATTGTCGCCGTCTCGCTTCCCC--GTACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCTCTC--TCTCTCCC--CGTCTCC----------------CTGTCAAACTCTCG-CC---GCCGTCG------CGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCAAAAAGACT--GCGAATAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae
...............................................................................................................................................................................................TG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AA.....................................................................2511.0010000001000
........................................................TGTTTGTTGTTTGTGTCT------------------------GTCCTC...............................................................................................................................................................................................................................................2411.0010010000000
..............................................................................................................CTCTCCC--CGTCTCC----------------CTGTC....................................................................................................................................................................................................1911.0010010000000
............................................................TGTTGTTTGTGTCT------------------------GTCGCT...............................................................................................................................................................................................................................................2011.0010000001000
droEre2
CGATTGTCGCCGTCTCGCTCCCCC--GTACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCT----CTCTCTCCC--CGTCTCC----------------CTGTCACACTCTCG-CC---GCCGTCG------CGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCCGAAAGACT--GCGAATAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head
...........................................GTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------.....................................................................................................................................................................................................................................................2711.001000010
.....................................................................................................................................................................................GTTTGTGTACTG-AAAAGAGGC----------------------------------------------..............................................................................................2111.001000001
..........................................................TTTGTTGTTTGTGTCT------------------------GTCGCT----CT.........................................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................GTGTACTG-AAAAGAGGC----------------------------------------------A------GCAAC..................................................................................2311.001000010
droEug1
CGATTCTCGTTGTCTCGTTCCCCC--TCACGC------AGCGATTT-------GTTTGTTTGTTGTTTGTGTCT------------------------GACGCT----CTCTCGCCC--CGTCTCTGTCGCT----------CTCTCACTCTCTTGCCC---GCCGTCG------CGCTTTGTTTGTGTACTG-AAAAGAGTC----------------------------------------------A------GCAACAAAATATAAAAAAATCCAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotal
No Reads
droBia1
CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGCTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCACT----CTCTCGCCC--CGTCTCT------------------CTCCCTCGCCCGCCC---GCCGTCG------TGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCCAGGCGACT--GCGAA-AAGCATAAATA---------ATAAACAAC-----------GACGAGACASizeHit CountTotal NormTotal
No Reads
droTak1
CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GACACT----CTCTCGCCC--CGTCTCT------------------CTCACTCTCTCGCCC---GCCGTCG------CGATTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCCAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotal
No Reads
droEle1
CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCTCACTCTCTCTCCC--TGTCT------------------------CGCTCTCG-CC---GCCGTCGCGTTTGCGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAAAT-----AAAGCGAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotal
No Reads
droRho1
CGATTCTCGTCGTCTCGCTCCCCC--GCACGC------AGCGAGTTGT----TGTTTGTTTGTTGTTTGTGTCT------------------------GTCGCTCACTCTCTCTCCC--TGTCT------------------------CTCTCTCG-CC---GCCGTCGCGTTTGCGTTTTGTTTGTGTACTG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCTAAAAGACT--GCGAAAAAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotal
No Reads
droFic1
CGATTG-----------------------------------------------------------TTTGTCTCT------------------------GTCGCT----CTCACTCAC--CGTCTCG----------------------CTCTTTCGCCCGCCGTCGTCG------CGTTTTGTTTGTGTACCG-AAAAGAGGC----------------------------------------------A------GCAACAAAATA-----AAAGCTAAAAGACT--GCGAA-AAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotal
No Reads
droKik1
CGATTCTCGTTGTCTCGCTCGCTCTCGCACACGCACGCAGCGAGTTGT----TGTTTATCTGTTGTCTCCCTCT------------------------C--------------------------TCTCTTTCCCTCCCTCTCTGGCAG-TTTGCG-TC---GCCGTCG-------GTTTTGTTTGTGTACTG-AAAAGAAGCAGCAGAAACG---------GCAGCA------------------------------AACAAAATA-----AAAACCC-AAGACT--GCGAA-AAGCATAAATA---------ATAAACAAC--------------GAGACASizeHit CountTotal NormTotal
No Reads
droAna3
CGATTCTCGTCGTCCCGCTCGCTC--TCACGCGC-----TCTTGTTGC----TGTTTGTTTGTT---TG--T--------------------------------------------------------------------------------CTCG-CCGCCGACGTCG------CGTTTTGTTTGTGTACTG-AGAAGAAGCAG-AAAAACATCAGCAGTGGCAGTGGCAGTGGTAGGTGGAAGTGGCAGTGGCAACAACAAAATACTGCAATAGC---AAGACT--GCAAAAAAAAATAACAACAAATTTTTATAAACAAA-------TAACGTGGCGACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................GGTGGAAGTGGCAGTGGCA.......................................................................................1920.501000010
droBip1
CGATTCTCGTCATCCCGCTCGCTC--TCACGCGC-----TCTTGTTGC----TGTTTGTTTGTT---TG--T--------------------------------------------------------------------------------CTCG-CCGCCGACGTCG------CGTTTTGTTTGTGTACTG-AGAAGAAGCAG-AA-AACATCAGCAGTGGCAGTGG-------------------CAGTGGCAACAACAAAATACTGG-ATAGC---AAGACTCGGCAAA-AAAAATAACAA--AAT---TATAAACAAA-------TACTGTGGCGACASizeHit CountTotal NormTotal
No Reads
dp5
CGATTCTCGTTGTCCCGCTCGCAC--GCACGCACG-----TTGGTT-CTGTT--CTTGTTTGTT----GTGTCTCGCCACAGTCGTCGTCGCCGTCGA-------------AGTCCCAGCGTCGCT------------------GTCGCT---------GTCGCCGTCG------CGTTTTGTTAGTGTGTTTGTGTATGTGTGG-AA-AAGGGCCGCCGCGGCAGAGA-------------------AA------GCAACAAAAGA-----A------GGAGACT--GTGGAAAATAGTAAATA------------AACCAGGTGCCGCCGCTTT-AGGACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................CAAAAGA-----A------GGAGACT--GTGGA..................................................2012.0020000000002
......................................................................................................................................................................................................................................................................AAAGA-----A------GGAGACT--GTGGA..................................................1811.0010000000001
..........................................................................................GCCGTCGA-------------AGTCCCAGCG..............................................................................................................................................................................................................................1811.0010100000000
.......................C--GCACGCACG-----TTGGTT-CTG.....................................................................................................................................................................................................................................................................................................1911.0010000100000
................................................TGTT--CTTGTTTGTT----GTGTCTCGCC.........................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................AAAAGA-----A------GGAGACT--GTGGAAA................................................2111.0010000000001
.........................................................................................................................................................................................................................................................................GA-----A------GGAGACT--GTGGAAAAT..............................................1911.0010000000010
................................................................................................................................................GTCGCT---------GTCGCCGTCG------CGTT....................................................................................................................................................................2011.0010000100000
..................................................................................................................................................................................................................................................................AACAAAAGA-----A------GGAGACT--GTGGA..................................................2211.0010000000001
................................................................................................................................................................................................................................................................................A------GGAGACT--GTGGAAAATAGTAAAT.......................................2411.0010000000001
...................................................................................................................................................................................................................................................................ACAAAAGA-----A------GGAGACT--GTGG...................................................2011.0010010000000
....................................................................................................................................................................................................................................................................CAAAAGA-----A------GGAGACT--GTG....................................................1811.0010100000000
........................................................................................................................GTCGCT------------------GTCGCT---------GTCGCC..................................................................................................................................................................................18200.0510100000000
droPer2
CGATTCTCGTTGTCCCGCTCGCAC--GCACGCACG-----TTGGTT-CTGTT--CTTGTTTGTT----GTGTCTCGCCACAGTCGTCGTCGCCGTCGA-------------AGTCCCAGCGTCGCT------------------GTCGCTGTCGCT---GTCGCCGTCG------CGTTTTGTTAGTGTGTTTGTGTATGTGTGG-AA-AAGGGCCGCCGCGGCAGAGA-------------------AA------GCAACAAAAGA-----A------GGAGACT--GTGGAAAATAGTAAATA------------AACCAGGTGCCGCCGCTTT-AGGACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................GCGTCGCT------------------GTCGCTGTCGCT---GTCGCCGTC...............................................................................................................................................................................2913.003300000
..........................................................................CGCCACAGTCGTCGTCGCCGTC.......................................................................................................................................................................................................................................................2212.002200000
.............................................................................................................................................................................................GTTTGTGTATGTGTGG-AA-AAGG..................................................................................................................................2211.001000001
.............................................................................................................................................................................................GTTTGTGTATGTGTGG-AA-AAG...................................................................................................................................2111.001000001
..........................................................................................................................................................................................TGTGTTTGTGTATGTGTGG-A........................................................................................................................................2011.001001000
.................................................................................................................................................................................................................AAGGGCCGCCGCGGCAGAGA-------------------AA------G......................................................................................2311.001010000
...........................CACGCACG-----TTGGTT-CTGT....................................................................................................................................................................................................................................................................................................1811.001001000
.............................CGCACG-----TTGGTT-CTGTT--CTTGTTTGTT----...................................................................................................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................AGTGTGTTTGTGTATGTGTGG-AA-......................................................................................................................................2311.001000001
.........................................................................................................................................................................................GTGTGTTTGTGTATGTGTGG-AA-AAG...................................................................................................................................2511.001000001

Generated: 01/23/2015 at 08:47 AM