ID:

dme-mir-iab-8

 Coordinate:

chr3R:12681997-12682064 -

 Confidence:

Known Ortholog

 Type:

intergenic

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.2 -36.2 -35.8

Sense Strand Reads

TATTAAGGTGTCTTAAAAAGTGTTTCACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATTATTCAAAAGTGCTGAAAATTATGCGTCGTC
****************************************..((((..(((((((..((((((((((((.((((.((....((......))..)))))).)))))))))))).)))))))..))))....************************************** 		Read size # Mismatch Hit Count Total Norm Total V074
S3		 V128
S3 		GSM609218
Sg4		 V136
Male aged body
 V138
Male cold body
 V086
female body, aged
 GSM609234
CS  male total RNA  
 V133
Sg4 		V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 SRR060643
A2_testes_total
 V092
dcr-2[G31R] male total RNA  
 SRR060652
hs-Penelope_testes_total
 V140
Dessication_female_body
 V142
Oxidation_female_body
 V141
Heat_female_body
 V012
Dcr2 male (Katsutomo, whole fly?)
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 SRR060650
A1_testes_total
 V015
DreRFHV148h
 V139
Cold_female_body
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 GSM609223
male, one day
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 SRR060645
yw67c23(2)_testes_total
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1
 V0632
wt ovary AGO1-IP, reseq
AGO1
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 GSM609238
embryo 14-24hr
 GSM628271
r2d2[1] ovary total RNA  
 GSM609239
IR- 2-18hr
 GSM286611
6-10h #2 (11)
 GSM609224
female, one day
 GSE24544
dcr-2[L811fsX] ovary total RNA
 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1
 GSM609240
IR+ 2-18hr
 GSM399107
male body #2
 GSM628272
ago2[414] ovary total RNA
 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 GSM286605
2-6h #1 (8)
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 GSM609231
ago2[414], ovary, AGO1IP
AGO1
 GSM286607
6-10h #1 (10)
 V006
r2d2 female: possibly heterozygous
 GSM609232
r2d2[1] ovary total RNA  
 GSM609237
ago2[414] ovary total RNA
 GSM360262
0-2d pupae
 SRR298536
strain: vret148-60/TM6genotype/variation: Vret Heterozygote
 GSE24545
CS ovary total RNA
 GSM286604
0-1h #3 (7)
 GSM379059
Piwi Mutant
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1
 GSM609229
embryo 2-6hr
 V137
Male aged head
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1
 SRR060644
A2_ovaries_total
 SRR031703
Total small RNAs from r2d2 homozygous flies
 GSM280085
WT testes (18-24nt)
 GSM322219
2-4day pupae #1
 SRR031699
Total small RNAs from dcr-2 homozygous flies
 S6
0-1,2-6,6-10h embryo
 SRR029633
total small RNAs from hen1 homozygous flies
 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 GSM609236
dcr-2[L811fsX], ovary, AGO1IP
AGO1
 GSM379065
Zuc Heterozygote
 GSM609244
KC+48 #2
 GSM322543
male head #1
 GSM286602
male body
 SRR031696
Ago1-associated small RNAs from Oregon R
AGO1
 SRR031698
2'-O-methylated small RNAs from dcr-2 heterozygous flies
 SRR060646
yw67c23(2)_ovaries_total
 GSM609230
CS,ovary,AGO1IP
AGO1
 GSM379057
Krimp Mutant
 GSM467729
Dmel_wt_sRNAseq
 GSM467730
Dmel_r2d2_sRNAseq
 SRR001664
homozygous_dcr-2_untreated
 SRR031692
Total small RNAs from Oregon R
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 GSM364902
12-24hr embryo
 SRR014275
Ovary_rep1_LK_P
 GSM399106
female body #2
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 V073
mbn2 		V146
S1 cell		 GSM180332
mid embryo (6-10)
 GSM399105
disk #2
 GSM360256
1st instar #1
 SRR014270
Embryo_0-2hrs_rep1_NA_0_2hr_Emb
 SRR060653
hs-Penelope_ ovaries_total
 V077
cold, female head
 V078
Desiccation, female head
 V080
Starvation, female head
 V096
loqsKO/f00791 ovary
 GSM379051
Armi Mutant
 GSM379061
Squ Heterozygote
 GSM379064
Vasa Mutant
 GSM275691
imaginal disc
 SRR014277
Ovary_rep1_NA_P
 SRR014282
Ovary_rep1_wK_P
 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 GSM609222
ML-DmBG1-C1		 V079
Oxidation, female head
 GSM280084
loqs-/- ovaries (18-29nt)
 GSM322245
3rd instar #1
 GSM360260
0-1d Pupae (w)
 SRR001347
ago2_untreated
 SRR014273
Ovary_rep1_Har_P
 SRR065801
zuc_het(H-Y)_ovaries
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 V130
ML-DmBG3-c2 		V132
ML-DmD32 		GSM379053
Aub Mutant
 GSM379054
Flam Heterozygote
 GSM379055
Flam Mutant
 GSM379063
Vasa Heterozygote
 GSM322338
2-4day pupae#2
 GSM609243
KC+48 #1
 GSM286603
female body
 SRR001349
heterozygous_dcr-2_untreated
 SRR010959
Ago3 IP in heterozygotes
AGO3
 SRR014276
Ovary_rep1_NA(fem)_x_Har(male)_F1
 GSM609248
ML-DmD9 cell		 V127
G2		 V144
OSC		 V126
CME L1 		GSM180329
adult bodies (female bodies, male bodies)
 GSM180330
very early embryo (0-1)
 GSM180333
late embryo (12-24)
 GSM180334
larvae: 1st instar and 3rd instars
 GSM180336
pupae: 0-1 day, 0-2 day, 2-4 day
 GSM280083
dcr-2-/- ovaries (18-29nt)
 GSM379050
Armi Heterozygote
 GSM379052
Aub Heterozygote
 GSM379062
Squ Mutant
 GSM379066
Zuc Mutant
 GSM379067
SpnE Mutant
 GSM467731
Dmel_loq_sRNAseq
 GSM286613
0-1hr #1 (A)
 GSM322208
3rd instar #2
 GSM360257
1st instar #2
 GSM609242
s2+48 #2
 SRR001338
IR_non-beta-eliminated
 SRR001339
WT_females_non-beta-eliminated
 SRR010952
Ago3 trans-heterozygotes, oxidized
 SRR010954
Aub trans-heterozygotes, oxidized
 SRR014268
Embryo_0-2hrs_rep1_HAR_0_2hr_Emb
 SRR014279
Ovary_rep1_w1118(fem)_x_wK(male)_F1
 SRR014280
Ovary_rep1_w1118_P
 SRR065807
Piwi-IP_squ_het_ovaries
 GSM609217
MLDmD20c5		 V023
Dcr2 female head
 V148
mbn2 		GSM385748
OSS_s6		 GSM609226
CMEW1 Cl.8+ cell		 GSM609227
CMEW1 Cl.8+ cell		 V091
fGS/OSS total  		 GSM385744
OSS_s2		 GSM385821
OSS_s7		 V135
CME W2 (wing disc line)		 GSM385822
OSS_s8		 V085
CME W2 wing disc
.......................................................TTACGTATACTGAAGGTAT.............................................................................................. 19 0 1 6832.00 6832 1016 973 122 517 382 265 290 209 245 17 125 206 139 233 221 217 60 0 90 53 124 88 102 100 85 3 79 68 4 68 63 10 32 50 8 0 51 55 37 3 11 40 0 0 20 34 0 20 20 30 1 10 29 1 14 20 3 18 2 14 1 8 0 0 0 2 0 9 3 0 0 1 3 0 9 8 4 0 0 1 0 1 0 7 0 4 1 0 0 0 0 1 5 3 2 3 3 2 3 4 0 2 4 0 1 1 0 3 3 0 0 0 2 3 1 3 3 2 1 2 1 1 0 0 0 0 0 2 2 1 0 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACC........................................................................................... 22 0 1 923.00 923 102 33 154 2 8 0 1 11 2 146 10 5 9 3 2 2 32 0 13 24 1 14 6 2 5 45 4 7 60 4 5 49 7 4 27 0 0 0 4 25 2 1 0 0 5 1 1 3 1 0 0 5 0 4 3 0 1 0 7 0 2 4 0 9 0 2 5 1 3 1 6 0 2 4 0 0 1 0 0 0 1 3 0 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 1 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATA............................................................................................. 20 0 1 564.00 564 61 53 98 16 37 5 4 30 5 30 4 4 5 13 7 7 50 4 11 35 5 8 5 0 0 5 2 3 8 2 2 4 4 1 1 0 0 0 2 1 3 0 2 0 2 0 0 2 0 0 2 2 1 0 3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATAC............................................................................................ 21 0 1 486.00 486 82 10 92 3 2 1 1 13 5 36 14 0 5 0 0 1 32 9 2 20 2 3 3 2 4 24 1 1 11 4 1 8 2 1 7 0 0 1 3 5 3 1 1 0 3 1 0 4 0 1 4 4 0 0 3 0 0 0 4 2 9 2 0 3 0 5 1 0 2 2 0 0 2 1 0 0 2 0 0 1 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 2 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCG.......................................................................................... 23 0 1 194.00 194 9 9 13 0 2 0 0 4 1 1 21 1 28 1 0 0 2 0 17 1 0 2 1 1 0 1 0 3 0 1 0 0 1 0 2 3 0 0 0 2 15 0 0 0 0 0 0 0 0 0 6 0 0 7 0 1 0 0 0 0 0 2 6 0 2 1 0 0 0 3 2 1 0 0 0 0 0 0 1 0 2 0 1 0 2 0 1 0 1 1 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGG......................................................................................... 24 0 1 167.00 167 7 6 8 0 0 0 0 6 0 20 32 0 12 0 0 0 0 0 16 2 0 0 1 0 1 3 1 2 6 0 0 4 3 1 1 0 0 0 0 3 1 0 0 0 4 0 5 0 0 0 0 3 0 0 1 0 1 0 3 1 2 0 1 0 0 1 2 0 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGATACATTCAGTATACGTTTA..................................................... 22 0 1 165.00 165 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 3 0 0 0 0 0 0 1 0 0 35 0 0 0 0 8 0 0 34 0 0 21 0 0 0 7 0 0 11 0 0 1 0 0 0 0 0 6 1 7 0 0 0 0 0 0 1 0 1 0 0 0 4 5 0 0 0 2 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGT......................................................................................... 24 1 1 155.00 155 31 41 0 0 4 0 2 23 1 0 14 1 8 1 0 1 2 0 8 0 0 0 0 2 0 1 1 1 0 0 0 0 5 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATATC........................................................................................... 22 1 1 110.00 110 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGGAT.............................................................................................. 19 1 1 102.00 102 40 6 1 3 1 16 5 0 4 0 0 5 0 0 1 1 2 0 1 0 1 2 0 0 3 0 1 1 0 1 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGTTACGTATACTGAAGGTAT.............................................................................................. 21 0 1 99.00 99 15 17 4 1 2 0 3 20 2 1 4 3 2 0 0 2 0 0 2 2 0 1 0 2 1 0 2 1 0 0 0 0 9 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGAAT.............................................................................................. 19 1 1 92.00 92 40 5 1 0 1 10 6 0 6 0 1 4 0 0 2 2 2 0 0 1 0 0 0 1 0 0 0 0 0 4 1 0 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGGATACTGAAGGTAT.............................................................................................. 19 1 1 68.00 68 45 0 5 0 0 4 3 0 6 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGCAT.............................................................................................. 19 1 1 61.00 61 19 4 0 5 0 7 5 1 2 1 0 4 0 2 1 1 0 0 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGATC...................................................................................... 27 1 1 60.00 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGT........................................................................................ 25 1 1 56.00 56 3 1 7 0 0 0 0 1 0 3 19 0 6 0 0 0 1 0 3 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TTGTTAGTGCTCTCTCGTG................................................................................................................. 19 0 1 50.00 50 7 18 7 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGGATACATTCAGTATACGTTT...................................................... 22 0 1 49.00 49 5 3 6 0 0 0 1 1 0 0 5 0 0 0 1 0 0 0 4 1 0 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGA........................................................................................ 25 0 1 42.00 42 3 3 5 0 0 0 0 1 0 3 7 1 2 0 0 0 1 0 2 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 2 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGGATACATTCAGTATACGTTTA..................................................... 23 0 1 38.00 38 3 1 5 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 3 1 0 5 0 1 0 5 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGGATACTGAAGGAAT.............................................................................................. 19 2 1 29.00 29 27 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTTAAGGTAT.............................................................................................. 19 1 1 25.00 25 8 0 0 4 2 1 2 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATAA............................................................................................ 21 1 1 24.00 24 4 1 0 1 0 0 1 1 0 1 3 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 1 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GATACATTCAGTATACGTTTAA.................................................... 22 1 1 24.00 24 12 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTCT.............................................................................................. 19 1 1 19.00 19 1 4 0 2 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.......................................................TCACGTATACTGGAGGTATACA........................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATAATTCCACAGAATTTTTCACAAAGTGTAGGGTGCAACAATCACGAGAGAGCACAATGCATATGACTTCCATATGGCCTATCCTATGTGAGTCCTATGTAAGTCATATGCAAATGCTCCAGCGTGTCTTAGCGGTAATAAGTTTTCACGACTTTTAATACGCAGCAG
**************************************..((((..(((((((..((((((((((((.((((.((....((......))..)))))).)))))))))))).)))))))..))))....**************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM286611
6-10h #2 (11)
 GSM286607
6-10h #1 (10)
 SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 GSM286605
2-6h #1 (8)
 GSM467730
Dmel_r2d2_sRNAseq
 GSM467729
Dmel_wt_sRNAseq
 S6
0-1,2-6,6-10h embryo
 GSM609239
IR- 2-18hr
 GSM286606
2-6h #2 (9)
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 GSM360262
0-2d pupae
 GSM286604
0-1h #3 (7)
 GSM609240
IR+ 2-18hr
 GSM467731
Dmel_loq_sRNAseq
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 GSM609238
embryo 14-24hr
 GSM609229
embryo 2-6hr
 GSM322219
2-4day pupae #1
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 GSM364902
12-24hr embryo
 GSM286613
0-1hr #1 (A)
 GSM399107
male body #2
 GSM180332
mid embryo (6-10)
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 GSM360256
1st instar #1
 SRR298536
strain: vret148-60/TM6genotype/variation: Vret Heterozygote
 GSM399105
disk #2
 GSM360260
0-1d Pupae (w)
 GSM360257
1st instar #2
 GSM322245
3rd instar #1
 GSM322543
male head #1
 GSM275691
imaginal disc
 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 SRR031703
Total small RNAs from r2d2 homozygous flies
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 SRR014270
Embryo_0-2hrs_rep1_NA_0_2hr_Emb
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 GSM180331
early embryo (2-6)
 GSM399106
female body #2
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1		 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 GSM180333
late embryo (12-24)
 GSM322208
3rd instar #2
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1		 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 SRR029633
total small RNAs from hen1 homozygous flies
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 SRR029608
total small RNAs from hen1 heterozygous flies
 GSM628271
r2d2[1] ovary total RNA  
 SRR031692
Total small RNAs from Oregon R
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 SRR014268
Embryo_0-2hrs_rep1_HAR_0_2hr_Emb
 SRR014269
Embryo_0-2hrs_rep1_LK_0_2hr_Emb
 GSM286602
male body
 GSM379057
Krimp Mutant
 V012
Dcr2 male (Katsutomo, whole fly?)
 V0632
wt ovary AGO1-IP, reseq
AGO1		 GSM379065
Zuc Heterozygote
 GSM609243
KC+48 #1
 SRR031696
Ago1-associated small RNAs from Oregon R
AGO1		 GSM343287
Drosophila Toll 10b mutant embryos
 GSM399110
KC-48 #2
 V015
DreRFHV148h
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1		 GSM322338
2-4day pupae#2
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1		 GSM609232
r2d2[1] ovary total RNA  
 GSM379059
Piwi Mutant
 SRR031698
2'-O-methylated small RNAs from dcr-2 heterozygous flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 GSM609244
KC+48 #2
 SRR014277
Ovary_rep1_NA_P
 GSM240749
female head
 GSM286603
female body
 SRR031699
Total small RNAs from dcr-2 homozygous flies
 GSM379064
Vasa Mutant
 GSM322533
female head #1
 SRR001664
homozygous_dcr-2_untreated
 GSM280085
WT testes (18-24nt)
 SRR001338
IR_non-beta-eliminated
 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 GSM609224
female, one day
 SRR014271
Embryo_0-2hrs_rep1_w1118_0_2hr_Emb
 SRR014274
Ovary_rep1_LK(fem)_x_Har(male)_F1
 SRR014275
Ovary_rep1_LK_P
 SRR060653
hs-Penelope_ ovaries_total
 GSM180330
very early embryo (0-1)
 GSM379056
Krimp Heterozygote
 GSM286601
male head
 GSM609242
s2+48 #2
 SRR060650
A1_testes_total
 GSM609230
CS,ovary,AGO1IP
AGO1		 GSM609233
r2d2[1], ovary, AGO1IP
AGO1		 GSM379066
Zuc Mutant
 SRR014276
Ovary_rep1_NA(fem)_x_Har(male)_F1
 SRR014282
Ovary_rep1_wK_P
 GSM609236
dcr-2[L811fsX], ovary, AGO1IP
AGO1		 GSM609223
male, one day
 V138
Male cold body
 V140
Dessication_female_body
 GSM180334
larvae: 1st instar and 3rd instars
 GSM180335
imaginal discs
 GSM379055
Flam Mutant
 SRR010954
Aub trans-heterozygotes, oxidized
 SRR014272
Embryo_0-2hrs_rep1_wK_0_2hr_Emb
 SRR014281
Ovary_rep1_wK(fem)_x_w1118(male)_F1
 SRR060643
A2_testes_total
 SRR060644
A2_ovaries_total
 GSM180328
adult heads (female heads, male heads)
 GSM180329
adult bodies (female bodies, male bodies)
 GSM180336
pupae: 0-1 day, 0-2 day, 2-4 day
 GSM280083
dcr-2-/- ovaries (18-29nt)
 GSM379058
Piwi Heterozygote
 GSM379061
Squ Heterozygote
 GSM379062
Squ Mutant
 SRR010953
Aub heterozygotes, oxidized
 SRR060645
yw67c23(2)_testes_total
 SRR065800
zuc_H-Y_ovaries
 GSM609234
CS  male total RNA  
 V096
loqsKO/f00791 ovary
 GSE24544
dcr-2[L811fsX] ovary total RNA
 GSM379060
SpnE Heterozygote
 GSM379067
SpnE Mutant
 GSM385744
OSS_s2		 GSM272653
KC -48 #1
 SRR031693
2'-O-methylated small RNAs from Oregon R
 SRR031700
2'-O-methylated small RNAs from dcr-2 homozygous flies
 SRR060646
yw67c23(2)_ovaries_total
 SRR060652
hs-Penelope_testes_total
 SRR065801
zuc_het(H-Y)_ovaries
 V006
r2d2 female: possibly heterozygous
 GSM609231
ago2[414], ovary, AGO1IP
AGO1		 GSM628272
ago2[414] ovary total RNA
 V139
Cold_female_body
 V142
Oxidation_female_body
 GSM280082
WT ovaries (18-29nt)
 GSM379050
Armi Heterozygote
 GSM379052
Aub Heterozygote
 GSM379053
Aub Mutant
 GSM379054
Flam Heterozygote
 GSM385822
OSS_s8		 GSM361908
s2-48 Biological Replicate #2
 GSM272651
S2-48,+48, KC-48, +48 mix
 SRR001339
WT_females_non-beta-eliminated
 SRR001343
dcr-2_non-beta-eliminated
 SRR001347
ago2_untreated
 SRR001349
heterozygous_dcr-2_untreated
 SRR010951
Ago3 heterozygotes, oxidized
 SRR010957
Aub IP in Ago3 trans-heterozygotes
 SRR010958
Piwi IP in Ago3 trans-heterozygotes
 SRR010960
wt, oxidized
 SRR341115
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 SRR341118
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 V023
Dcr2 female head
 GSM609222
ML-DmBG1-C1		 V092
dcr-2[G31R] male total RNA  
 V136
Male aged body
..........................................................................................AGTCCTATGTAAGTCATATGCA........................................................ 22 0 1 15910.00 15910 3330 2277 1681 1219 1051 962 727 475 193 339 234 200 216 200 209 194 140 110 124 142 91 110 93 63 86 91 65 66 74 47 48 59 1 43 49 1 47 54 32 36 36 40 37 33 15 29 27 26 24 23 24 16 22 18 20 10 17 9 4 15 11 11 1 7 3 12 11 11 13 5 7 1 9 9 10 5 8 6 6 5 0 5 3 0 6 7 3 6 7 2 4 2 2 4 5 3 3 4 0 0 3 2 3 2 4 1 0 4 4 2 1 3 1 2 2 1 2 2 0 1 3 0 2 2 0 0 2 1 0 1 0 0 2 2 0 2 2 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0
.........................................................................................GAGTCCTATGTAAGTCATATGCA........................................................ 23 0 1 928.00 928 0 0 2 0 420 441 0 0 0 0 0 0 2 57 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTCCTATGTAAGTCATATGCA........................................................ 21 0 1 707.00 707 90 78 76 15 26 29 6 19 1 10 25 3 26 6 23 18 8 9 12 3 1 3 2 24 8 4 3 5 9 1 0 2 0 17 2 0 1 1 0 1 4 2 3 0 12 2 11 2 4 4 0 8 3 4 1 2 0 2 2 2 0 6 6 0 6 2 0 2 1 2 2 2 1 0 1 0 0 2 1 0 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 2 0 0 3 1 1 0 0 1 0 2 0 0 0 2 0 0 0 0 1 2 0 1 0 0 0 2 1 1 1 1 0 0 0 0 2 2 0 0 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................AATGCATATGACTTCCATATGGC.......................................................................................... 23 0 1 696.00 696 138 116 11 188 2 11 51 1 14 0 16 15 1 0 0 0 0 22 1 4 33 1 6 0 3 0 6 14 2 3 0 7 0 0 0 0 2 0 5 1 0 0 0 5 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 3 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ATGCATATGACTTCCATATGGC.......................................................................................... 22 0 1 578.00 578 112 44 30 129 0 3 41 1 14 0 16 31 1 0 8 0 1 17 7 5 10 9 5 1 4 0 15 9 4 10 4 8 0 1 0 0 1 0 3 8 1 1 0 3 0 0 0 2 0 0 0 0 0 0 0 3 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................CAATGCATATGACTTCCATATGGC.......................................................................................... 24 0 1 456.00 456 105 45 15 126 0 2 42 1 33 0 2 15 1 0 4 0 4 4 2 1 9 0 2 0 2 0 0 1 1 0 21 1 0 1 0 0 1 0 5 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TCCTATGTAAGTCATATGCA........................................................ 20 0 1 209.00 209 14 18 30 2 0 2 3 4 0 10 2 0 4 0 8 5 1 1 4 0 0 1 0 6 0 3 1 1 2 3 0 0 0 1 8 0 3 0 0 1 1 3 0 0 6 1 3 0 0 1 2 0 1 0 0 0 1 9 7 1 0 1 7 0 6 1 0 1 2 2 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 1 1 1 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AATGCATATGACTTCCATATGG........................................................................................... 22 0 1 154.00 154 39 3 0 77 0 0 9 0 7 0 6 0 0 0 0 0 0 0 0 1 6 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTATGTAAGTCATATGC......................................................... 21 0 1 126.00 126 46 8 2 12 6 3 13 7 4 0 3 0 2 0 0 0 0 1 1 4 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 4 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAGTCCTATGTAAGTCATATGCA........................................................ 23 1 1 107.00 107 26 18 20 0 0 0 6 1 7 3 2 5 1 0 2 1 0 1 3 0 0 1 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTCCTATGTAAGTCATATGCA........................................................ 25 2 1 107.00 107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ATTCCTATGTAAGTCATATGCA........................................................ 22 1 1 103.00 103 12 6 2 24 1 1 1 8 27 0 0 1 1 0 0 0 2 5 0 0 0 1 0 3 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGTCCTATGTAAGTCATATGCA........................................................ 22 1 1 103.00 103 22 19 4 12 0 0 0 2 5 3 0 0 2 0 1 2 1 0 0 0 1 0 0 0 0 2 1 0 1 3 1 0 0 0 1 0 0 0 0 1 0 0 0 0 4 0 0 1 2 0 1 1 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGCATATGACTTCCATATGGC.......................................................................................... 21 0 1 85.00 85 7 4 8 5 2 6 1 2 0 1 2 0 2 2 5 0 0 9 0 0 1 2 0 2 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 4 0 0 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0
.........................................................................................TAGTCCTATGTAAGTCATATGCA........................................................ 23 1 1 84.00 84 11 8 18 6 0 0 0 3 0 4 2 0 2 0 2 1 1 2 4 1 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 3 0 0 0 2 0 0 0 1 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTATGTAAGTCATATGAA........................................................ 22 1 1 77.00 77 66 2 2 1 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CAATGCATATGACTTCCATATGG........................................................................................... 23 0 1 75.00 75 12 14 0 22 0 0 1 0 14 0 0 3 0 0 0 0 0 0 0 0 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTATGTAAGTCATAGGCA........................................................ 22 1 1 59.00 59 14 2 33 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGTCCTATGTAAGTCATATGCA........................................................ 22 1 1 55.00 55 35 5 0 3 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGCCCTATGTAAGTCATATGCA........................................................ 22 1 1 45.00 45 2 3 2 1 11 12 2 4 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGACCTATGTAAGTCATATGCA........................................................ 22 1 1 44.00 44 0 1 0 0 13 23 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TAGTCCTATGTAAGTCATATGC......................................................... 22 1 1 42.00 42 5 0 1 5 0 0 9 5 2 1 0 0 1 0 0 1 2 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AATCCTATGTAAGTCATATGCA........................................................ 22 1 1 42.00 42 6 8 0 1 10 8 1 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................ACAATGCATATGACTTCCATAT............................................................................................. 22 0 1 41.00 41 5 3 4 0 0 0 1 0 0 0 5 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTATTTAAGTCATATGCA........................................................ 22 1 1 39.00 39 3 1 0 3 0 0 1 1 16 0 0 3 2 0 0 1 2 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTATGTACGTCATATGCA........................................................ 22 1 1 36.00 36 16 0 3 1 0 0 0 3 0 0 0 1 3 0 0 3 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CATATGACTTCCATATGGC.......................................................................................... 19 0 1 36.00 36 9 9 0 1 0 1 3 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GGTCCTATGTAAGTCATATGCA........................................................ 22 1 1 35.00 35 12 2 0 4 0 0 5 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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......................................................CAATGCATATGACTTCCTTATGGC.......................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTACGTGAGTCATAGGCA........................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTGTCCTATGTATGTCATATGCA........................................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTCCTATGTAAGTCATATTCA........................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGTCCTATGTAGGTCATATGCA........................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTACGCAAGTCATATACA........................................................ 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CAATGCATATGACTTCTATATGGC.......................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTCCGTAAGTCATACGCA........................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTACGTAGGTCATATGCA........................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CACAGCATATGACTTCCATATGGC.......................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGTGCATATGACTTCCATATGG........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CAATGCATATGACTTCCGTATGG........................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTCATATGTAAGTCATATGCA........................................................ 25 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ATTCCGATGTAAGTCATATGCA........................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AATGCATATGACTTCCATATGGCA......................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACCCTATGTAAGTCATATGCA........................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ATGCATATGACTTCAATATGGC.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TAGTCCTTTGTAAGTCATATGCA........................................................ 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGGCATAGGTAAGTCATATGCA........................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTGTCCTATGAAAGTCATATGC......................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAAGCATAAGACTTCCATATGGC.......................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCGTATGTAAGTCATATGC......................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TCCTAAGTAAGTCATATGCA........................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTCCTAGGTACGTCATATGCA........................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGTCCTATCTAAGTCATATGCA........................................................ 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AAGCGGTAACAAGTTTTCAC................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dm3 chr3R:12681947-12682114 - dme-mir-iab-8 TATTAAG----GTGTC-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATTC-------AAA----------AGTG-CTGA----A-AATTATG--CGTCGTC
droSim2 3r:8574066-8574232 + dsi-mir-iab-8 TATTAAA----GTGTA-TT-----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC-------AAA----------AGTG-CTGA----A-AATTATG--CCGTGTC
droSec2 scaffold_12:1472195-1472362 + dse_312 TATTAAG----ATGTA-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC-------AAA----------AGTG-CTGA----A-AATTATG--CCGTGTC
droYak3 3R:11708918-11709085 + dya_90 TATTAAG----CAGTA-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--GTCC-------AAA----------AGTG-CTGA----A-AATTACG--CGTCGTC
droEre2 scaffold_4770:8952367-8952534 + der_113 TATTGTA----GAGTC-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--ATCC-------AAA----------AGTG-CTGA----A-AATTATA--CGTCGTC
droEug1 scf7180000409804:92873-93032 - TTTTAAA----GT----------------------------AAACTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATA--ATCC-------GAA----------AGTG-ACCA----A-AATGAAG--TGCAGT-
droBia1 scf7180000299102:622743-622905 - TTTTCAA----AAA----------------------T----AAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------AAA----------AGTG-CCGA----G-AAAGATG--CGCCGCT
droTak1 scf7180000411269:86541-86704 - TTTTAAA----AAG----------------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------AAA----------AGTG-CCAA----AGAAGGATG--CGCCGCT
droEle1 scf7180000486474:1729418-1729590 - AATCACA----GTGCC-CTAAATTACATATATTTTTAAAGTAAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------GAA----------AGTG-ACGA----------------------
droRho1 scf7180000759657:23955-24125 - ATTCAA-----CAGTT-TTA----------------ACAGTAAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------GAA----------AGTG-CCAA----A-CAGGATG--CGTCGCT
droFic1 scf7180000452523:122324-122488 - TTTTAAG----G------------------------A----AAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATGAAATCCG----GCGAA----------AGTGACTGA----A-A--GACG--TGTCGCT
droKik1 scf7180000302313:151139-151298 - TTTTTT------------------------------T----CAAGTGTT------------------T--------CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCATC--ATCC-------GCA----------AGTG-CTTA----TAAAGGACA--CGAAAAA
droAna3 scaffold_13340:7215150-7215314 + dan_56 TTTTAAA----T-ATT-T----------------C------AGAATATTAAGTTT------------T--------CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CTCC-------GTA-AT--GTTCTAGTG-CTGC----A-A---------------
droBip1 scf7180000396708:1638844-1639002 - TTTGAAA----T-ATT-T----------------CTAAAACAAAGT-TT------------------T--------CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CATC-------GTA-A--------TTTT-CTGG----T-AA--------------
dp5 2:17671714-17671885 - dps-mir-iab-8 AATCACA----GTGCT-C---------------------------GGTT------------------TCAGTTCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C-------ATA----------ACCG-CTGAAAGAA-AATTACGAGTGCAGTC
droPer2 scaffold_0:11526520-11526704 - dpe_160 AATCACA----GTGCT-C---------------------------GGTT-----TACACGTTTAAATTCAGTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C-------ATA----------ACCG-CTGAAAGAA-AATTACGAATGCAGTC
droWil2 scf2_1100000004943:4905561-4905707 + dwi_203 TA----------------------------------A----AAAGTGTT------------------T------CACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT-------G-------GAA----------AGTG-ACCG----------GTA--CCCGGTG
droVir3 scaffold_12855:414657-414826 + dvi-mir-iab-8 TTTTAAT----GCAAT-CT-----------------A----AATATATC------------------A--------CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACA----AT-----------AAGTGC-----TCCG-CTATAAACA-CCTCA-GT-TTTCATC
droMoj3 scaffold_6540:1943691-1943860 - dmo_140 ATTAAAT----G-GTTATT-----------------G----AAGTTTTC------------------A--------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACA----ATTCGCTCCTGAAA----------AGTG-T--A----A-AATCTCG--AATCGCC
droGri2 scaffold_14906:12815078-12815243 - dgr_28 TATTATTTATCGAAAT-TT-----ATATATATAC--A----AA------------------------A--------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTCTACA----AGAGTGTCCT-------------------TTGG-----------AG--TGTCCCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dm3
TATTAAG----GTGTC-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATTC-------AAA----------AGTG-CTGA----A-AATTATG--CGTCGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................1916832.006832000000000000000000000013800000000000120121040140311430100000000000000000000000000000000000000000001100010100000000000100100000000001000000000000100207228801040000000000002000033000101000000212514689000900139500000030000000001020791021310171414000000008302000011226000530000000000020000000008633485968203701101600323333210051026520503040290020624500329550119730302209005171838212423321722100001
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................221923.00923000000000100000000000000400000000000000000010300000300000000000000000000000000000000100000000010120000600000010100040100000000001000010000001000000001140000000000000001201002454903025000007100700001309000000000000000005546204914600160000000002725030000154320024000000000000000000000051514040010220000117200014011052001000003300001100208132200000
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................201564.0056400000000000000000000000000000000000000000000030100000000010000000000000000000000000000000010000003000201000000000000000000000000000000000000000000000180000000000000000001000502000000000004030000110500000000000000000222500430212800004200110200009850003500000100000000000000002000202016100000004000501004045000100005300003000160375137700000
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................211486.004860000000000100000000000002000000000000111000203000002000000000000000000000000000000000000000000001300140000000200000000000000001001000000000000100000003000000000000000250100224130109100000414210000205000000000000000004313008361001100009100750400009232002000000000000000000000001140403008200010002200101111005000010001000001300302201000000
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................231194.0019400000000100010000000000020000000000000000000000000000000001000000000000000000000000003000006021021520062100102322210700000000000000000000000000000000002000000000000000010200010000000000000210300001702800000000000000000000100010000000000002200000013200100000000000000000000000000110019000000011000000000110000000090000400002010000000
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................241167.001670000000000000000000000000000000000000000000001000000000000110000000000000000000000005000000100000100000000000000000000000000000001010000000000000000000000000000000000010000131001022000003321200001601200000000000000000341100420000600000000130000008000200000000000000000000000010000007000000130000010000000000000060000600000000000000
................................................................................................................................................GGATACATTCAGTATACGTTTA................................................................................221165.001650000000020000000000000000000000000000000000000000000000004500000000000000000000000340213510020600300810270100000000720110000000000000000000000000000000000000000000000000000000003110000000000000000002000000000000000000000000000000000000000000000002000000000000000000000000000000000002000000110000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................241155.001550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000140100008080000000000000100011100000000000000000010000000200000000000000000000000000000000003110000005200011002011000000004100002300004011000000
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................21199.0099000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000110000000000000000000000000000000000040100002020000000000000000000200001000000000000100000004000200000000000000000000000010000001500000009200000003032000000001700002000102002000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGATC.................................................................................................................27160.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................25156.00560000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000001000000000000000000000000000000000000000000000100000001000000000000000000100000000000000000190000003060000000000000000011000003000000000000120000007100000000000000000000000000000000003000000001000000000000000000010000100000000000000
.......................................................................................TTGTTAGTGCTCTCTCGTG............................................................................................................................................19150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000170000009400000000000000000001180000200001000000000
...............................................................................................................................................AGGATACATTCAGTATACGTTT.................................................................................22149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000031000010000000110060000000000000000000000000000000000100000000000000001000000000000000000050000004000000000000000000000100000000000000000020000006000100000000000000000000000001100005000000001000000010000000000030000100000000100000
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................25142.0042000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000070100002020000000000000000011200013000000000000220000005100000000000000000000000000000000003000000100000000000100000000030000100000000000000
...............................................................................................................................................AGGATACATTCAGTATACGTTTA................................................................................23138.0038000000001000000000000000000000000000000000000000000000000000000000000000000000000030540000000000010005000000000000000000000000000000000000000010000000000000000000000000010000100000000000010000000010000000000000000001100000000000000000000000005000000000000000000000000000000000003000000100000100000000000000010000100000000000000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................21124.0024000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030300002000000000000000000000100001000000000000000000000100100000000000000000000001000000004000000000000000010000000000010000100100000000000
.................................................................................................................................................GATACATTCAGTATACGTTTAA...............................................................................22124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000012000000010000000000000000000020000000000000000000
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................18118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000001000000000000000000000000000000000008000000020100000000000000000000000000102000000000
..........................................................................................................TTACGTATACTGAAGGTATACCATC...................................................................................................................25117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GTTGTTAGTGCTCTCTCGTG............................................................................................................................................20114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000030000000000000000000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................18113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000100000000000000000000000010000004000000000001000000010000000010000000101000000000
..........................................................................................................TTACGTATACTGAAGGTAG.........................................................................................................................19112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000002000100000002000010040000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACATC....................................................................................................................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATAATC.....................................................................................................................23111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GGATACATTCAGTATACGTTT.................................................................................21111.0011000000100000000000000000000000000000000000000000000000000000000000000000000000000020040000000000000000000000000010000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCGT....................................................................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000010000110000000020000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACA......................................................................................................................22110.0010000000000000000000000000000000000000000000010100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000100001000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000001000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCGGA...................................................................................................................2418.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTAC.........................................................................................................................1918.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100001000000000001000010110000100000000000000000000000
...............................................................................................................................................AGGATACATTCAGTATACGTT..................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000100000000000000000000000020000000000000000000
..........................................................................................................TTACGTATACTGAAGGTAA.........................................................................................................................1917.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000001000010100000000010000000100000000000
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000010000000000000000000000010000000000000010000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................TACATTCAGTATACGTTTACGT.............................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000100000000000000000020000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2016.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000001000000000000000000000000000000000100100000000000
................................................................................................................................................GGATACATTCAGTATACGTTTAA...............................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000010000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GATACATTCAGTATACGTTTA................................................................................2116.006000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGTTACGTATACTGAAGGTATA........................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................TTACGTATACTGAAGGT...........................................................................................................................1714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGTTGTTAGTGCTCTCTCGTG............................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000010000100000000000000
.................................................................................................................................................GATACATTCAGTATACGTTTAT...............................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000
...................................................................................................................................TAGGATACACTCAGGATACATTCAGT.........................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000
................................................................................................................................................GGATACATTCAGTATACG....................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATAT.......................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGTTACGTATACTGAAGGTA..........................................................................................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................TTACGTATACTGAAGGTT..........................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000100000
...................................................................................................................................................TACATTCAGTATACGTTTA................................................................................1913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGAA..................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................ATACTGAAGGTATACCGG....................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GATACATTCAGTATACGTTTCA...............................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ACGTATACTGAAGGTATACCGG....................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATAGGATACACTCAGGATACAT..............................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATC........................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ACGTTGTTAGTGCTCTCTCGTG............................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.................................................................................................................................GATAGGATACACTCAGGATACATTCAGT.........................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................TACATTCAGTATACGTTTACGA.............................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................CGTATACTGAAGGTATACCGGA...................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CATTCAGTATACGTTTAA...............................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGATAA................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCGGAATC................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATATT......................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................GTTACGTATACTGAAGGTATACCGG....................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATACATTCAGTATACGTTT.................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
............................................................................................AGTGCTCTCTCGTGTTACGTA.....................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGATC..................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GATAGGATACACTCAGGATACATTC............................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TATTAAA----GTGTA-TT-----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC-------AAA----------AGTG-CTGA----A-AATTATG--CCGTGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................GGATACATTCAGTATACGTTTACG..............................................................................241196.001960000194200000000000
...............................................................................................................................................AGGATACATTCAGTATACGTTTACG..............................................................................251142.001420000142000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................241123.001230001026110223933018000
...............................................................................................................................................AGGATACATTCAGTATACGTTT.................................................................................221109.001090001107100000000000
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................181106.00106000099601000000000
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191105.001051241361035112300000
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................201104.00104022884200000501000
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................22174.00740752440004202701000
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................21148.0048040305010011600000
...............................................................................................................................................AGGATACATTCAGTATAC.....................................................................................18138.0038000038000000000000
...............................................................................................................................................AGGATACATTCAGTATACG....................................................................................19134.0034000033100000000000
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23134.00340021140000010016000
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................25127.002702516000251401000
...............................................................................................................................................AGGATACATTCAGTATACGT...................................................................................20120.0020000020000000000000
................................................................................................................................................GGATACATTCAGTATACGTTT.................................................................................21119.0019000018100000000000
................................................................................................................................................GGATACATTCAGTATACG....................................................................................18115.0015000015000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................25114.001401000020221006000
................................................................................................................................................GGATACATTCAGTATACGT...................................................................................19111.0011000011000000000000
................................................................................................................................................GGATACATTCAGTATACGTT..................................................................................20111.0011000011000000000000
...............................................................................................................................................AGGATACATTCAGTATACGTT..................................................................................2119.00900009000000000000
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2318.00800014000011001000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1818.00800016100000000000
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2217.00700024000000001000
................................................................................................................................................GGATACATTCAGTATACGTTTA................................................................................2217.00700005000000200000
.......................................................................................TTGCTCGTGCTATCTCGTG............................................................................................................................................1916.00600300000001200000
...........................................................................................................TACGTATACTGAAGGTATACCGGA...................................................................................................................2415.00501002001010000000
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................2414.00400010000002001000
................................................................................................................................................GGATACATTCAGTATACGTTTAC...............................................................................2314.00400004000000000000
.................................................................................................................................................GATACATTCAGTATACGTTTAA...............................................................................2213.00300010000020000000
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................2113.00300030000000000000
..................................................................................................................................ATAGGATACACTCAGGATACAT..............................................................................................2212.00200000000000002000
..........................................................................................................TTACGTATACTGAAGGTATACCGGG...................................................................................................................2512.00200200000000000000
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1912.00200002000000000000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................2012.00200002000000000000
......................................................................................GTTGCTCGTGCTATCTCGTG............................................................................................................................................2012.00200200000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGAT..................................................................................................................2612.00201001000000000000
.................................................................................................................................................GATACATTCAGTATACGT...................................................................................1811.00100001000000000000
..........................................................................................................TTACGTATACTGAAGGTAC.........................................................................................................................1911.00101000000000000000
..........................................................................................................TTACGTATACTGAAGGT...........................................................................................................................1711.00100000010000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGTT...................................................................................................................2511.00100000000000001000
..........................................................................................................TTACGTATACTGAAGGTATACT......................................................................................................................2211.00100000000000100000
...........................................................................................................TACGTATACTGAAGGTATACCGGAT..................................................................................................................2511.00100001000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCA.....................................................................................................................2311.00100100000000000000
.....................................................................................CGTTGCTCGTGCTATCTCGTG............................................................................................................................................2111.00100000000100000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGC...................................................................................................................2511.00100000000010000000
................................................................................................................ATACTGAAGGTATACCGG....................................................................................................................1811.00100000000001000000
...............................................................................................................................................AGGATACATTCAGTATACGTTTAC...............................................................................2411.00100001000000000000
...................................................................................................................................TAGGATACACTCAGGATACATTCAGT.........................................................................................2611.00100000000000100000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2111.00100000000001000000
...............................................................................................................................................AGGATACATTCAGTATACGTTTA................................................................................2311.00100000000000100000
..........................................................................................................TTACGTATACTGAAGGTAA.........................................................................................................................1911.00100000000000001000
.................................................................................................................................................GATACATTCAGTATACGTTTA................................................................................2111.00100001000000000000
.................................................................................................................................GATAGGATACACTCAGGATACATTCA...........................................................................................2611.00101000000000000000
............................................................................................................ACGTATACTGAAGGTATACCG.....................................................................................................................2111.00100000000000001000
..................................................................................................................................................ATACATTCAGTATACGTTTAT...............................................................................2111.00100000000100000000
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2011.00101000000000000000
.........................................................................................................GTTACGTATACTGAAGGTATACCGGA...................................................................................................................2611.00100100000000000000
.....................................................................................................................................................CATTCAGTATACGTTTACG..............................................................................1911.00100001000000000000
droSec2
TATTAAG----ATGTA-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATT--ATCC-------AAA----------AGTG-CTGA----A-AATTATG--CCGTGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191185.0018551941327
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................221130.001307916341
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................20170.00703421105
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................24156.0056381170
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................21147.0047311033
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23127.0027122130
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................25117.00176290
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................18115.001500132
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................24110.00101720
...............................................................................................................................................AGGATACATTCAGTATACGTTTA................................................................................2319.0093330
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................2519.0092232
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................2018.0088000
...............................................................................................................................................AGGATACATTCAGTATACGTTT.................................................................................2217.0073121
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1815.0055000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2115.0051400
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................2114.0040220
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................2114.0044000
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2314.0044000
................................................................................................................................................GGATACATTCAGTATACGTTTA................................................................................2213.0031110
.......................................................................................TTGCTCGTGCTATCTCGTG............................................................................................................................................1913.0030030
...........................................................................................................TACGTATACTGAAGGTATACCGGA...................................................................................................................2413.0032010
................................................................................................................ATACTGAAGGTATACCGG....................................................................................................................1812.0020020
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1912.0022000
..........................................................................................................TTACGTATACTGAAGGTATACA......................................................................................................................2212.0021001
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2012.0020200
..........................................................................................................TTACGTATACTGAAGGTATACCCC....................................................................................................................2411.0011000
................................................................................................................................................GGATACATTCAGTATACGTTT.................................................................................2111.0011000
.....................................................................................................................................................CATTCAGTATACGTTTAA...............................................................................1811.0010010
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2211.0011000
......................................................................................GTTGCTCGTGCTATCTCGTG............................................................................................................................................2011.0010010
..........................................................................................................TTACGTATACTGAAGGTATACT......................................................................................................................2211.0010010
..........................................................................................................TTACGTATACTGAAGGTATACCGTT...................................................................................................................2511.0010100
.............................................................................................................CGTATACTGAAGGTATACCGGA...................................................................................................................2211.0010010
..........................................................................................................TTACGTATACTGAAGGTATACCGGATA.................................................................................................................2711.0010010
..........................................................................................................TTACGTATACTGAAGGTAA.........................................................................................................................1911.0010100
...........................................................................................................TACGTATACTGAAGGTATACCGGT...................................................................................................................2411.0010100
droYak3
TATTAAG----CAGTA-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--GTCC-------AAA----------AGTG-CTGA----A-AATTACG--CGTCGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................221529.0052901064173102000
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................211270.0027001411216002000
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191131.00131068014553000
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................20191.00910502114006000
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................24186.0086042395000000
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23123.002301641101000
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................21116.001601510000000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................2018.0080800000000
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................2417.0070110005000
...............................................................................................................................................AGGATACATTCAGTATACGTTTA................................................................................2316.0060042000000
...............................................................................................................................................AGGATACATTCAGTATACGTTT.................................................................................2215.0050230000000
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2315.0050500000000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1814.0040400000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................2514.0040022000000
........................................................................................................TGTTACGTATACTGAAGGTATA........................................................................................................................2213.0030030000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................2513.0030020001000
................................................................................................................................................GGATACATTCAGTATACGTTTA................................................................................2213.0030030000000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2112.0020200000000
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................1812.0020110000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGC...................................................................................................................2512.0020011000000
................................................................................................................................................GGATACATTCAGTATACGTTT.................................................................................2112.0020020000000
...............................................................................................................................................AGGATACATTCAGTATACGTT..................................................................................2112.0020020000000
................................................................................................................................................GGATACATTCAGTATACGTTC.................................................................................2112.0020020000000
.......................................................................................TTGCTCGTGCTTTCTCGTG............................................................................................................................................1911.0010010000000
............................................................................................................ACGTATACTGAAGGTATACC......................................................................................................................2011.0010100000000
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2211.0010100000000
............................................................................................................ACGTATACTGAAGGTATACCGG....................................................................................................................2211.0010100000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGG...................................................................................................................2511.0010100000000
..............................................................................................................GTATACTGAAGGTATACCG.....................................................................................................................1911.0010100000000
............................................................................................................ACGTATACTGAAGGTATAC.......................................................................................................................1911.0010100000000
..................................................................................................................................................ATACATTCAGTATACGTTTACC..............................................................................2211.0010010000000
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2011.0010000001000
............................................................................................................ACGTATACTGAAGGTATACCGGC...................................................................................................................2311.0010010000000
...............................................................................................................................................AGGATACATTCAGTATACGTTC.................................................................................2211.0010010000000
...........................................................................................................TACGTATACTGAAGGTATACCGGA...................................................................................................................2411.0010100000000
..........................................................................................................TTACGTATACTGAAGGTAA.........................................................................................................................1911.0010100000000
.........................................................................................................GTTACGTATACTGAAGGTAT.........................................................................................................................2011.0010000001000
.........................................................................................................GTTACGTATACTGAAGGTATAC.......................................................................................................................2211.0010010000000
.....................................................................................CGTTGCTCGTGCTTTCTCGTG............................................................................................................................................2111.0010000001000
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1911.0010100000000
..........................................................................................................TTACGTATACTGAAGGTATACCGA....................................................................................................................2411.0010100000000
..........................................................................................................TTACGTATACTGAAGGTATACA......................................................................................................................2211.0010010000000
.............................................................................................................CGTATACTGAAGGTATACC......................................................................................................................1911.0010100000000
.................................................................................................................................................GATACATTCAGTATACGTTTAAC..............................................................................2311.0010010000000
.................................................................................................................................................GATACATTCAGTATACGTTTAT...............................................................................2211.0010100000000
droEre2
TATTGTA----GAGTC-TTA----------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTTA--ATCC-------AAA----------AGTG-CTGA----A-AATTATA--CGTCGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191533.005336904437581
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................221264.002641557719814
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................211143.0014396262388
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................201105.001055570171214
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................24195.00958350160
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23134.00342821030
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................24117.00176100100
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................21113.00131210000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................20113.00131200010
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................1819.009100008
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2318.008800000
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................2517.007300040
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................2517.007310120
.......................................................................................TTGCTCGTGCTTTCTCGTG............................................................................................................................................1916.006010032
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2215.005500000
...............................................................................................................................................AGGATACATTCAGTATACGTTT.................................................................................2215.005101120
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1913.003300000
....................................................................................ACGTTGCTCGTGCTTTCTCGTG............................................................................................................................................2212.002000002
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................2112.002000020
...............................................................................................................................................AGGATACATTCAGTATACGTTTA................................................................................2312.002100100
..........................................................................................................TTACGTATACTGAAGGTATACCCT....................................................................................................................2412.002100100
................................................................................................................................................GGATACATTCAGTATACGTTTA................................................................................2212.002110000
..........................................................................................................TTACGTATACTGAAGGTATACCGA....................................................................................................................2412.002200000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1812.002200000
.........................................................................................................GTTACGTATACTGAAGGTATACC......................................................................................................................2311.001100000
...................................................................................................................................TAGGATACACTCAGGATACATTCA...........................................................................................2411.001000001
...........................................................................................................TACGTATACTGAAGGTATACCGGA...................................................................................................................2411.001100000
.........................................................................................................GTTACGTATACTGAAGGTATACCGT....................................................................................................................2511.001100000
.............................................................................................................CGTATACTGAAGGTATAC.......................................................................................................................1811.001100000
................................................................................................................................................GGATACATTCAGTATACGTT..................................................................................2011.001100000
...............................................................................................................................................AGGATACATTCAGTATACGTTTAA...............................................................................2411.001100000
...........................................................................................................TACGTATACTGAAGGTATACCGGT...................................................................................................................2411.001100000
..........................................................................................................TTACGTATACTGAAGGTATC........................................................................................................................2011.001000010
.........................................................................................................GTTACGTATACTGAAGGTATA........................................................................................................................2111.001100000
.......................................................................................TTGCTCGTGCTTTCTCGTGT...........................................................................................................................................2011.001100000
......................................................................................GTTGCTCGTGCTTTCTCGTG............................................................................................................................................2011.001000010
..........................................................................................................TTACGTATACTGAAGGTAA.........................................................................................................................1911.001000010
................................................................................................................................................GGATACATTCAGTATACGTTT.................................................................................2111.001100000
..........................................................................................................TTACGTATACTGAAGGTATACCGGAA..................................................................................................................2611.001100000
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2011.001000010
..........................................................................................................TTACGTATACTGAAGGTATACCGC....................................................................................................................2411.001010000
droEug1
TTTTAAA----GT----------------------------AAACTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATA--ATCC-------GAA----------AGTG-ACCA----A-AATGAAG--TGCAGT-SizeHit CountTotal NormTotal
No Reads
droBia1
TTTTCAA----AAA----------------------T----AAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------AAA----------AGTG-CCGA----G-AAAGATG--CGCCGCTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTAAA----AAG----------------------A----AAAGTGTT------------------T--------CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------AAA----------AGTG-CCAA----AGAAGGATG--CGCCGCTSizeHit CountTotal NormTotal
No Reads
droEle1
AATCACA----GTGCC-CTAAATTACATATATTTTTAAAGTAAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------GAA----------AGTG-ACGA----------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATTCAA-----CAGTT-TTA----------------ACAGTAAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCATA--ATCC-------GAA----------AGTG-CCAA----A-CAGGATG--CGTCGCTSizeHit CountTotal NormTotal
No Reads
droFic1
TTTTAAG----G------------------------A----AAAGTGTT------------------T--------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATGAAATCCG----GCGAA----------AGTGACTGA----A-A--GACG--TGTCGCTSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTT------------------------------T----CAAGTGTT------------------T--------CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCATC--ATCC-------GCA----------AGTG-CTTA----TAAAGGACA--CGAAAAASizeHit CountTotal NormTotal
No Reads
droAna3
TTTTAAA----T-ATT-T----------------C------AGAATATTAAGTTT------------T--------CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CTCC-------GTA-AT--GTTCTAGTG-CTGC----A-A---------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191232.0023244001015325
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................22189.008929442536
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................24147.00473330308
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................20145.00452540088
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................21129.00292070020
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................24119.00193000124
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................21118.00183001113
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................25111.0011300134
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23110.0010600031
...................................................................................................................................................TACATTCAGTATACGTATACGT.............................................................................2216.006000060
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1814.004400000
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................2114.004310000
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2014.004110020
................................................................................................................................................GGATACATTCAGTATACGTATA................................................................................2214.004130000
...............................................................................................................................................AGGATACATTCAGTATACGT...................................................................................2013.003000030
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................2512.002200000
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2212.002200000
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1912.002200000
..........................................................................................................TTACGTATACTGAAGGTATACCA.....................................................................................................................2311.001100000
...............................................................................................................................................AGGATACATTCAGTATACGTAT.................................................................................2211.001100000
................................................................................................................................................GGATACATTCAGTATACGTAT.................................................................................2111.001010000
..........................................................................................................TTACGTATACTGAAGGTATACCGTTG..................................................................................................................2611.001000010
............................................................................................................ACGTATACTGAAGGTATACC......................................................................................................................2011.001100000
..........................................................................................................TTACGTATACTGAAGGTATACCGGTGT.................................................................................................................2711.001000010
...........................................................................................................TACGTATACTGAAGGTATACCGTT...................................................................................................................2411.001100000
........................................................................................................TGTTACGTATACTGAAGGTAG.........................................................................................................................2111.001000010
........................................................................................................TGTTACGTATACTGAAGGTATT........................................................................................................................2211.001100000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2111.001100000
.........................................................................................................................................ACACTCAGGATACATTCAG..........................................................................................1911.001010000
..........................................................................................................TTACGTATACTGAAGGTATACCGC....................................................................................................................2411.001000010
.............................................................................................................CGTATACTGAAGGTATACCGG....................................................................................................................2111.001100000
........................................................................................................TGTTACGTATACTGAAGGTATACC......................................................................................................................2411.001010000
..........................................................................................................TTACGTATACTGAAGGTAC.........................................................................................................................1911.001000010
..........................................................................................................TTACGTATACTGAAGGTACT........................................................................................................................2011.001100000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................2011.001100000
........................................................................................................TGTTACGTATACTGAAGGTATG........................................................................................................................2211.001100000
........................................................................................................TGTTACGTATACTGAAGGT...........................................................................................................................1960.171100000
droBip1
TTTGAAA----T-ATT-T----------------CTAAAACAAAGT-TT------------------T--------CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCATC--CATC-------GTA-A--------TTTT-CTGG----T-AA--------------SizeHit CountTotal NormTotal
No Reads
dp5
AATCACA----GTGCT-C---------------------------GGTT------------------TCAGTTCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C-------ATA----------ACCG-CTGAAAGAA-AATTACGAGTGCAGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................211736.007360611562815690110
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191390.0039012410153799060
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................201370.00370029961037311040
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................221326.003260105157351552070
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................241183.001830484031001243
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................20132.003203110000000
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................19130.003003000000000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................18128.002802800000000
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23120.002001210100060
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................25115.00150700112040
...............................................................................................................................................AGGATACATTCAGTATACGTATA................................................................................23111.00110080200010
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................21111.001101100000000
................................................................................................................................................GGATACATTCAGTATACGTATA................................................................................2216.0060060000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................2516.0060200002020
.............................................................................................................CGTATACTGAAGGTATACCGGA...................................................................................................................2215.0050200300000
...............................................................................................................................................AGGATACATTCAGTATACGTA..................................................................................2114.0040130000000
...............................................................................................................................................AGGATACATTCAGTATACGTAT.................................................................................2214.0040310000000
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2014.0040000004000
..........................................................................................................TTACGTATACTGAAGGTATACA......................................................................................................................2214.0040210000010
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2314.0040400000000
............................................................................................................ACGTATACTGAAGGTATAC.......................................................................................................................1913.0030300000000
...............................................................................................................................................AGGATACATTCAGTATACGT...................................................................................2013.0030000002010
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................2412.0020000001010
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2112.0020200000000
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................1812.0020100100000
...................................................................................................................................................TACATTCAGTATACGTATACGT.............................................................................2211.0010000001000
.................................................................................................................................................GATACATTCAGTATACGTATAC...............................................................................2211.0010010000000
............................................................................................................ACGTATACTGAAGGTATACCGG....................................................................................................................2211.0010100000000
...................................................................................................................................................TACATTCAGTATACGTATA................................................................................1911.0010100000000
..........................................................................................................TTACGTATACTGAAGGTTA.........................................................................................................................1911.0010000001000
.....................................................................AGTTCGACGTATCCCGCGTTGCT..........................................................................................................................................................2311.0010000100000
..........................................................................................................TTACGTATACTGAAGGTATTA.......................................................................................................................2111.0010000100000
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................2111.0010000001000
..........................................................................................................TTACGTATACTGAAGGTATACT......................................................................................................................2211.0010000000010
..........................................................................................................TTACGTATACTGAAGGTATTT.......................................................................................................................2111.0010000000010
...............................................................................................................................................AGGATACATTCAGTATACGTATAC...............................................................................2411.0010100000000
............................................................................................................ACGTATACTGAAGGTATACCG.....................................................................................................................2111.0010100000000
.............................................................................................................CGTATACTGAAGGTATACCGG....................................................................................................................2111.0010100000000
...........................................................................................................TACGTATACTGAAGGTATACA......................................................................................................................2111.0010100000000
droPer2
AATCACA----GTGCT-C---------------------------GGTT-----TACACGTTTAAATTCAGTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCTA-----C-------ATA----------ACCG-CTGAAAGAA-AATTACGAATGCAGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191543.00543025562505
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................20164.0064015191128
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................21146.00460393004
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................22124.00242192001
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................24111.0011081002
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................20110.0010010009
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2312.002020000
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................2412.002000002
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................2112.002020000
..........................................................................................................TTACGTATACTGAAGGTTA.........................................................................................................................1912.002000002
..........................................................................................................TTACGTATACTGAAGGTATACT......................................................................................................................2211.001000001
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2211.001010000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................2011.001010000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2111.001000001
.............................................................................................................CGTATACTGAAGGTATACCGG....................................................................................................................2111.001010000
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................2511.001000001
................................................................................................................................................GGATACATTCAGTATACGTATA................................................................................2211.001010000
...............................................................................................................................................AGGATACATTCAGTATACGT...................................................................................2011.001000001
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1911.001010000
...........................................................................................................TACGTATACTGAAGGTATACCGGA...................................................................................................................2411.001010000
..........................................................................................................TTACGTATACTGAAGGTAA.........................................................................................................................1911.001000001
...............................................................................ATCCCGCGTTGCTGGTGTTTCCTCGTG............................................................................................................................................2711.001100000
..........................................................................................................TTACGTATACTGAAGGTATAT.......................................................................................................................2111.001001000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1811.001010000
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................2311.001010000
droWil2
TA----------------------------------A----AAAGTGTT------------------T------CACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT-------G-------GAA----------AGTG-ACCG----------GTA--CCCGGTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191236.002361128672317
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................211224.0022411771432
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................201135.001350776448
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................24187.00870580290
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................22166.00660411222
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23124.0024017070
...............................................................................................................................................AGGATACATTCAGTATACGTA..................................................................................21116.0016040102
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................25114.001404190
.............................................................................................................CGTATACTGAAGGTATACCGGA...................................................................................................................22113.0013110110
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................18113.0013013000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................20111.0011011000
.......................................................................................TTGTTGGTGTTTCATCGTG............................................................................................................................................19110.0010000100
...............................................................................................................................................AGGATACATTCAGTATACGT...................................................................................2019.00904320
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1919.00909000
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2319.00909000
...............................................................................................................................................AGGATACATTCAGTATACGTAT.................................................................................2216.00604020
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................2514.00401030
...............................................................................................................................................AGGATACATTCAGTATACGTATA................................................................................2313.00301020
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................2112.00202000
..........................................................................................................TTACGTATACTGAAGGTATACA......................................................................................................................2212.00202000
................................................................................................................................................GGATACATTCAGTATACGTAT.................................................................................2112.00202000
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................2412.00201010
.........................................................................................................GTTACGTATACTGAAGGTATAC.......................................................................................................................2212.00202000
.....................................................................................CGTTGTTGGTGTTTCATCGTG............................................................................................................................................2112.00200020
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2012.00202000
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................2111.00100100
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................1811.00100010
...........................................................................................................TACGTATACTGAAGGTATACCGGT...................................................................................................................2411.00101000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2111.00101000
...............................................................................ATCCCGCGTTGTTGGTGTTTCATCGTG............................................................................................................................................2711.00100010
............................................................................................................ACGTATACTGAAGGTATAC.......................................................................................................................1911.00101000
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2211.00101000
..........................................................................................................TTACGTATACTGAAGGTATACG......................................................................................................................2211.00101000
..........................................................................................................TTACGTATACTGAAGGTATACCGGTA..................................................................................................................2611.00101000
..................................................................................................................................................ATACATTCAGTATACGTATACG..............................................................................2211.00100010
............................................................................................................ACGTATACTGAAGGTATA........................................................................................................................1811.00101000
...........................................................................................................TACGTATACTGAAGGTATACA......................................................................................................................2111.00101000
...............................................................................................................................................AGGATACATTCAGTATACGTC..................................................................................2111.00101000
...............................................................................................................................................AGGATACATTCAGTATACGTATAA...............................................................................2411.00101000
...........................................................................................................................................ACTCAGGATACATTCAGT.........................................................................................1811.00100100
...........................................................................................................TACGTATACTGAAGGTATACCGGA...................................................................................................................2411.00101000
.................................................................................CCCGCGTTGTTGGTGTTTCATCGTG............................................................................................................................................2511.00100100
droVir3
TTTTAAT----GCAAT-CT-----------------A----AATATATC------------------A--------CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACA----AT-----------AAGTGC-----TCCG-CTATAAACA-CCTCA-GT-TTTCATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................1911123.00112311110001211251391000010111069264221252119319001480000112000000000000000000001178
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................221692.00692102055406050400004130103280102112062371170400000490000000000000000000101
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................241633.0063300232014000000000000000080000017086582420501000240000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................211529.00529002015020101000031021031600023807224850200000320000000000000000000002
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................201342.003420067107238015000011010051100000545018620200000110000000000000000000104
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................231306.00306101320901010000011010201500000694015830700001430000000000000000000001
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................251149.001490000150000000000000011000000311713580700000150000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................211121.001210020090104000000000030000010133162701000100120000000000000000000001
...............................................................................................................................................AGGATACATTCAGTATACGT...................................................................................20190.0090000001100000000000000610000001521517070000060000000000000000000001
...............................................................................................................................................AGGATACATTCAGTATACGTA..................................................................................21181.008100010100000000000000001000001625824020000030000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................25168.006800200300000000000010000100001817513010000060000000000000000000001
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................24140.0040001008000000000000000000000043150200000140000000000000000000002
...............................................................................................................................................AGGATACATTCAGTATACGTAT.................................................................................22125.002500000000000000000000000000007826010000000000000000000001000000
...............................................................................................................................................AGGATACATTCAGTATACGTATA................................................................................23123.002300100000000000000000000000009606010000000000000000000000000000
................................................................................................................................................GGATACATTCAGTATACGTATA................................................................................22120.002000520000000000000000000000002414010000000000000000000000000100
.............................................................................................................CGTATACTGAAGGTATACCGGA...................................................................................................................22116.001600100001000000000000001000006313000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................20116.0016001500000000000000000000000001000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................21115.0015001410000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACT........................................................................................................36114.001400000000000000000000000000000000000000000100000000030200026000
..........................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTC.......................................................................................................37113.001300000000000000000000000000000000000000000000000000002200108000
..........................................................................................................TTACGTATACTGAAGGTATACCC.....................................................................................................................2318.00800000000000000000000000000003032000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATAAA......................................................................................................................2218.00800000000000000000000000000002212000010000000000000000000000000
...............................................................................................................................................AGGATACATTCAGTATACGTAA.................................................................................2218.00800000000000000000000000000000223000000000000000000000000000001
............................................................................................................ACGTATACTGAAGGTATACCGG....................................................................................................................2217.00700300000000000000000000000001111000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................1817.00700000001010000000000200000000101010000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACA......................................................................................................................2217.00700200000000000000000000000001004000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1816.00600600000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATAT.......................................................................................................................2116.00600100000000000100000000000002101000000000000000000000000000000
................................................................................................................................................GGATACATTCAGTATACGTAT.................................................................................2115.00500200000000000000000000000000210000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGTA..................................................................................................................2615.00500000000000000000000000020000201000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGAA..................................................................................................................2615.00500000000000000000000000000001112000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTAA.........................................................................................................................1914.00400000100000000000000000000001001000000000000000000000000000001
...............................................................................................................................................AGGATACATTCAGTATACG....................................................................................1914.00400000000000000000000000000001002000000000000000000000000000010
..........................................................................................................TTACGTATACTGAAGGTAC.........................................................................................................................1913.00300000200000000000000000000000001000000000000000000000000000000
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................2113.00300000200000000000000000000000001000000000000000000000000000000
............................................................................................................ACGTATACTGAAGGTATACCGGA...................................................................................................................2313.00300000000000000000000000000001101000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATC........................................................................................................................2013.00300000001000000000000000000000100000000000000000000000000000001
........................................................................................CGCTGGTGTTTCCTCGTG............................................................................................................................................1813.00300000000000000000000000000000201000000000000000000000000000000
................................................................................................................ATACTGAAGGTATACCGG....................................................................................................................1813.00300000100000000000000000000000100000000010000000000000000000000
.............................................................................................................CGTATACTGAAGGTATACCGG....................................................................................................................2112.00200100000000000000000000000000000010000000000000000000000000000
...............................................................................ATCCCGCGTCGCTGGTGTTTCCTCGTG............................................................................................................................................2712.00200000100000000000000000000000000000000010000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATAAAA.....................................................................................................................2312.00200000000000000000000000000001100000000000000000000000000000000
..............................................................................................................................................CAGGATACATTCAGTATACGTA..................................................................................2212.00200000000000000000000000000001010000000000000000000000000000000
.............................................................................................................................................TCAGGATACATTCAGTATACGTATA................................................................................2512.00200000000000000000000000000000011000000000000000000000000000000
......................................................................................GTCGCTGGTGTTTCCTCGTG............................................................................................................................................2012.00200100000000000000000000000000000000000000000000000000000000100
..........................................................................................................TTACGTATACTGAAGGTATACT......................................................................................................................2212.00200000000000000000100000000000000000000010000000000000000000000
.................................................................................CCCGCGTCGCTGGTGTTTCCTCGTG............................................................................................................................................2512.00200000000000000000000000000000000010000000000000000100000000000
...............................................................................................................................................AGGATACATTCAGTATACGTT..................................................................................2112.00200000000000000000000000000000200000000000000000000000000000000
.........................................................................................................GTTACGTATACTGAAGGTAT.........................................................................................................................2012.00200200000000000000000000000000000000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1912.00200200000000000000000000000000000000000000000000000000000000000
..................T-----------------A----AATATATC------------------A--------CACATCCCGC................................................................................................................................................................2112.00200000000000000000000000000000200000000000000000000000000000000
.................................................................................................................................................GATACATTCAGTATACGTAT.................................................................................2012.00200200000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GATACATTCAGTATACGTATAA...............................................................................2211.00100000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................AGGATACATTCAGTATACGTG..................................................................................2111.00100000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................CAGGATACATTCAGTATACGTAT.................................................................................2311.00100000000000000000000000000001000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGCA..................................................................................................................2611.00100000000000000000000000000001000000000000000000000000000000000
............................................................................................................ACGTATACTGAAGGTATACCGGT...................................................................................................................2311.00100000000000000000000000000001000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCAA....................................................................................................................2411.00100000000000000000000000000000100000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTCT......................................................................................................3811.00100000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................GGATACATTCAGTATACGTA..................................................................................2011.00100000000000000000000000000001000000000000000000000000000000000
.....................................................................................CGTCGCTGGTGTTTCCTCGTG............................................................................................................................................2111.00100000000000000000000000000000001000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2311.00100000000000000000000000000000001000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGG...................................................................................................................2511.00100010000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACA..........................................................................................................3411.00100000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................TCAGGATACATTCAGTATACGT...................................................................................2211.00100000000000000000000000000000100000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTT..........................................................................................................................1811.00100000000000000000000000000000100000000000000000000000000000000
.........................................................................................................GTTACGTATACTGAAGGTATA........................................................................................................................2111.00100100000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGAT..................................................................................................................2611.00100000000000000000000000000000010000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGTC..................................................................................................................2611.00110000000000000000000000000000000000000000000000000000000000000
......................................................................................GTCGCTGGTGTTTCCTCGTA............................................................................................................................................2011.00100000000000000000000000000000001000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATT........................................................................................................................2011.00100000000000000000000000000000100000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCT.....................................................................................................................2311.00100000000000000000000000010000000000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGGAG..................................................................................................................2611.00100000000000000000000000000001000000000000000000000000000000000
............................................................................................................ACGTATACTGAAGGTATACCGT....................................................................................................................2211.00100000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................GGATACATTCAGTATACGTATAA...............................................................................2311.00100000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................AT-----------AAGTGC-----TCCG-CTATAAACA-................2111.00100000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................AGGATACATTCAGTATACGTC..................................................................................2111.00100000000000000000000000000000001000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2211.00100000000000000000000000000000100000000000000000000000000000000
...........................................................................................................TACGTATACTGAAGGTATACCGGT...................................................................................................................2411.00100000000000000000000000000000010000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATACCGTC...................................................................................................................2511.00100000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................GGATACATTCAGTATACGTAA.................................................................................2111.00100000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................GGATACATTCAGTATACGT...................................................................................1911.00100100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GATACATTCAGTATACGTATAT...............................................................................2211.00100000000000000000000000000000100000000000000000000000000000000
..........................................................................................................TTACGTATACTGAAGGTATATA......................................................................................................................2211.00100000000000000000000100000000000000000000000000000000000000000
droMoj3
ATTAAAT----G-GTTATT-----------------G----AAGTTTTC------------------A--------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACA----ATTCGCTCCTGAAA----------AGTG-T--A----A-AATCTCG--AATCGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................221891.0089121511016559
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................191603.006031600682427
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................211595.005954654001179
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................201147.001471073001522
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................241104.0010466601274
................................................................................................................................................GGATACATTCAGTATACGTATA................................................................................22192.00924000880
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................20154.00544900050
..........................................................................................................TTACGTATACTGAAGGTATACCG.....................................................................................................................23133.00332510133
...............................................................................................................................................AGGATACATTCAGTATACGTATA................................................................................23123.00231000220
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................24116.00161000510
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................21116.00161500010
...............................................................................................................................................AGGATACATTCAGTATACGTA..................................................................................21111.0011020090
..........................................................................................................TTACGTATACTGAAGGTATACCGGT...................................................................................................................25110.0010200017
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1918.008800000
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1818.008800000
..........................................................................................................TTACGTATACTGAAGGTATACCGGA...................................................................................................................2517.007310012
...........................................................................................................TACGTATACTGAAGGTATACCGG....................................................................................................................2315.005500000
..................T-----------------G----AAGTTTTC------------------A--------CACATCCCGC................................................................................................................................................................2114.004010030
..........................................................................................................TTACGTATACTGAAGGTATAA.......................................................................................................................2114.004100102
.............................................................................................................CGTATACTGAAGGTATACCGGA...................................................................................................................2214.004010030
.................................................................................................................................................GATACATTCAGTATACGTATAC...............................................................................2214.004000040
..........................................................................................................TTACGTATACTGAAGGTATACA......................................................................................................................2213.003100020
...............................................................................................................................................AGGATACATTCAGTATACGT...................................................................................2013.003100002
................................................................................................................................................GGATACATTCAGTATACGTAT.................................................................................2112.002200000
.................................................................................................................................................GATACATTCAGTATACGTATA................................................................................2112.002100010
...............................................................................................................................................AGGATACATTCAGTATACGTAT.................................................................................2212.002200000
................................................................................................................................................GGATACATTCAGTATACGTAC.................................................................................2112.002000020
..........................................................................................................TTACGTATACTGAAGGTAC.........................................................................................................................1911.001000001
............................................................................................................ACGTATACTGAAGGTATA........................................................................................................................1811.001100000
..........................................................................................................TTACGTATACTGAAGGTATACG......................................................................................................................2211.001000010
..............................................................................................................GTATACTGAAGGTATACC......................................................................................................................1811.001000010
..........................................................................................................TTACGTATACTGAAGGTATAT.......................................................................................................................2111.001100000
................................................................................................................................................GGATACATTCAGTATACGTATT................................................................................2211.001000010
..........................................................................................................TTACGTATACTGAAGGTATACCGGTA..................................................................................................................2611.001100000
.................................................................................................................................GATAGGATACACTCAGGATACATTCAGT.........................................................................................2811.001000001
............................................................................................................ACGTATACTGAAGGTATACCGG....................................................................................................................2211.001100000
.........................................................................................................GTTACGTATACTGAAGGTATAC.......................................................................................................................2211.001100000
..................................................................................................................................ATAGGATACACTCAGGAT..................................................................................................1811.001001000
..........................................................................................................TTACGTATACTGAAGGTTC.........................................................................................................................1911.001000001
................................................................................................................................................GGATACATTCAGTATACGT...................................................................................1911.001100000
.................................................................................................................................................GATACATTCAGTATACGTATAA...............................................................................2211.001000010
............................................................................................................................................CTCAGGATACATTCAGTA........................................................................................1811.001000001
................................................................................................................ATACTGAAGGTATACCGGT...................................................................................................................1911.001000001
.................................................................................CCCGCGTTGCTGGTGTTTCCTCGTG............................................................................................................................................2511.001000010
............................................................................................................................................CTCAGGATACATTCAGTATACGTATA................................................................................2611.001000001
.................................................................................................................................................GATACATTCAGTATACGTAT.................................................................................2011.001100000
...........................................................................................................................ATACCGGATAGGATACACTCAGGAT..................................................................................................2511.001000001
........................................................................................................TGTTACGTATACTGAAGGTAT.........................................................................................................................2111.001000001
..........................................................................................................TTACGTATACTGAAGGTATACCT.....................................................................................................................2311.001000010
.................................................................................................................................GATAGGATACACTCAGGATAC................................................................................................2111.001100000
..........................................................................................................TTACGTATACTGAAGGTA..........................................................................................................................1811.001100000
...........................................................................................................TACGTATACTGAAGGTATACCG.....................................................................................................................2211.001100000
......................................................................................................CGTGTTACGTATACTGAAGGTATAC.......................................................................................................................2511.001100000
droGri2
TATTATTTATCGAAAT-TT-----ATATATATAC--A----AA------------------------A--------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTCTACA----AGAGTGTCCT-------------------TTGG-----------AG--TGTCCCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................TTACGTATACTGAAGGTAT.........................................................................................................................19132.00321319
..........................................................................................................TTACGTATACTGAAGGTATA........................................................................................................................20118.0018171
..........................................................................................................TTACGTATACTGAAGGTATAC.......................................................................................................................21115.0015150
..........................................................................................................TTACGTATACTGAAGGTATACC......................................................................................................................2219.00990
..........................................................................................................TTACGTATACTGAAGGTATACCGG....................................................................................................................2414.00440
...........................................................................................................TACGTATACTGAAGGTATACC......................................................................................................................2114.00440
...........................................................................................................TACGTATACTGAAGGTAT.........................................................................................................................1813.00330
...........................................................................................................TACGTATACTGAAGGTATA........................................................................................................................1912.00220
..........................................................................................................TTACGTATACTGAAGGTATACCGT....................................................................................................................2412.00211
...........................................................................................................TACGTATACTGAAGGTATAC.......................................................................................................................2012.00220

Generated: 01/24/2015 at 02:49 AM