ID:

dme-mir-971

 Coordinate:

chrX:12956105-12956200 +

 Confidence:

Known Ortholog

 Type:

intron

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-45.4 -45.4 -45.4

Sense Strand Reads

GGAGAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAGAATTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTTTTCTCAGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTCCGTACACAGAAAGAAAACCCCTATTGATATAACCATTTAATTTTCAATTGTCAA
******************************************************.((((((((.((((((((((((...((((.((((((.(((((((...)))).)))))))))))))...))))))))))))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM322543
male head #1
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1
 SRR031703
Total small RNAs from r2d2 homozygous flies
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 SRR029633
total small RNAs from hen1 homozygous flies
 SRR001345
ago2_non-beta-eliminated
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 SRR031699
Total small RNAs from dcr-2 homozygous flies
 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR001349
heterozygous_dcr-2_untreated
 SRR031692
Total small RNAs from Oregon R
 SRR001347
ago2_untreated
 V137
Male aged head
 GSM322533
female head #1
 GSM240749
female head
 SRR001664
homozygous_dcr-2_untreated
 SRR031696
Ago1-associated small RNAs from Oregon R
AGO1
 SRR001339
WT_females_non-beta-eliminated
 V023
Dcr2 female head
 V080
Starvation, female head
 SRR001341
WT_males_non-beta-eliminated
 SRR001344
dcr-2_beta-eliminated
 SRR001338
IR_non-beta-eliminated
 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 GSM286601
male head
 GSM360257
1st instar #2
 SRR001343
dcr-2_non-beta-eliminated
 GSM275691
imaginal disc
 GSM399105
disk #2
 V077
cold, female head
 GSM180328
adult heads (female heads, male heads)
 V079
Oxidation, female head
 V078
Desiccation, female head
 GSM313162
dcr-2 homozygous, untreated
 GSM360256
1st instar #1
 GSM313163
dcr-2 heterozygous, untreated
 GSM399107
male body #2
 GSM364902
12-24hr embryo
 GSM609251
aged female head
 GSM609247
heat female head
 GSM322219
2-4day pupae #1
 GSM286604
0-1h #3 (7)
 GSM609238
embryo 14-24hr
 V147
1182-4H cell		 GSM360260
0-1d Pupae (w)
 GSM246084
D. melanogaster adult male heads 454
 GSM360262
0-2d pupae
 GSM399110
KC-48 #2
 SRR001348
ago2_oxidized
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 V012
Dcr2 male (Katsutomo, whole fly?)
 GSM609239
IR- 2-18hr
 V140
Dessication_female_body
 GSM272653
KC -48 #1
 SRR031700
2'-O-methylated small RNAs from dcr-2 homozygous flies
 SRR001337
WT_females_beta-eliminated
 GSM399106
female body #2
 GSM180335
imaginal discs
 GSM280085
WT testes (18-24nt)
 V138
Male cold body
 GSM180333
late embryo (12-24)
 GSM609234
CS  male total RNA  
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 GSM609240
IR+ 2-18hr
 SRR031698
2'-O-methylated small RNAs from dcr-2 heterozygous flies
 GSM322245
3rd instar #1
 SRR001346
ago2_beta-eliminated
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 V032
S1 cell		 GSM467730
Dmel_r2d2_sRNAseq
 GSM609244
KC+48 #2
 GSM286602
male body
 GSM467729
Dmel_wt_sRNAseq
 GSM609242
s2+48 #2
 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 V092
dcr-2[G31R] male total RNA  
 V127
G2		 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 V015
DreRFHV148h
 GSM609223
male, one day
 GSM239052
S2 cells, non beta-eliminated
 V146
S1 cell		 GSM286605
2-6h #1 (8)
 GSM322208
3rd instar #2
 V141
Heat_female_body
 V006
r2d2 female: possibly heterozygous
 GSM609224
female, one day
 SRR031693
2'-O-methylated small RNAs from Oregon R
 V142
Oxidation_female_body
 GSM239041
fly heads, non beta-eliminated
 GSM286603
female body
 GSM609221
1182-4H cell		 V136
Male aged body
 GSM180334
larvae: 1st instar and 3rd instars
 GSM313161
dcr-2 heterozygous, oxidized
 GSM467731
Dmel_loq_sRNAseq
 GSM322338
2-4day pupae#2
 GSM313160
dcr-2 homozygous, oxidized
 S6
0-1,2-6,6-10h embryo
 SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 V139
Cold_female_body
 V148
mbn2 		GSM180329
adult bodies (female bodies, male bodies)
 GSM609243
KC+48 #1
 SRR001340
IR_beta-eliminated
 SRR031694
2'-O-methylated small RNAs from Oregon R
 V073
mbn2 		V132
ML-DmD32 		SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 V022
ML-DmD32 cell		 V086
female body, aged
 GSM180336
pupae: 0-1 day, 0-2 day, 2-4 day
 GSM286611
6-10h #2 (11)
 GSM286613
0-1hr #1 (A)
 SRR001342
WT_males_beta-eliminated
 V008
S2-DRSC		 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2
 GSM239051
S2 cells, beta-eliminated
AGO2
 GSM286607
6-10h #1 (10)
 GSM361908
s2-48 Biological Replicate #2
 GSM272651
S2-48,+48, KC-48, +48 mix
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 GSM609220
ML-DmD21 cell		 GSM239050
fly heads, beta-eliminated
 GSM312995
WT, oxidized
 GSM313165
ago2 homozygous, oxidized (technical replicate #2)
 GSM379052
Aub Heterozygote
 GSM379063
Vasa Heterozygote
 GSM379065
Zuc Heterozygote
 GSM379067
SpnE Mutant
 GSM385744
OSS_s2		 GSM385748
OSS_s6		 GSM385822
OSS_s8		 GSM286606
2-6h #2 (9)
 SRR010953
Aub heterozygotes, oxidized
 SRR014277
Ovary_rep1_NA_P
 SRR298536
strain: vret148-60/TM6genotype/variation: Vret Heterozygote
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 SRR341115
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 SRR341118
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 GSM343832
S2R+ cell		 GSM609227
CMEW1 Cl.8+ cell		 GSM609250
ML-DmD32 cell		 V0632
wt ovary AGO1-IP, reseq
AGO1
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1
 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1
 GSM609225
ML-DmBG3-C2		 GSM609229
embryo 2-6hr
 V085
CME W2 wing disc		 GSM628271
r2d2[1] ovary total RNA  
 V096
loqsKO/f00791 ovary
.............................................................................................................TTGGTGTTACTTCTTGCAGTGA................................................................. 22 1 1 12791.00 12791 1981 1252 764 559 619 714 542 514 433 275 371 234 414 396 327 178 349 270 265 140 180 184 132 102 107 68 111 104 102 71 106 42 56 0 46 0 105 20 47 39 32 29 15 1 40 37 35 2 12 0 22 7 17 2 17 15 21 17 0 22 12 9 0 5 9 5 20 12 0 0 11 5 0 7 0 11 0 0 0 4 7 10 0 4 6 9 5 8 6 5 4 8 0 3 1 0 0 3 0 5 3 4 0 5 2 2 2 0 0 0 1 2 1 2 0 3 3 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTACAGTGA................................................................. 22 0 1 4185.00 4185 358 407 259 168 132 169 132 132 93 43 156 48 84 81 67 59 119 95 65 37 49 44 29 30 25 102 27 52 41 11 18 6 13 117 75 103 17 85 8 14 27 23 40 51 15 8 16 44 2 0 2 22 9 28 1 9 8 9 28 3 18 6 26 17 6 10 1 3 7 11 5 4 11 6 0 0 12 6 16 3 1 0 7 9 7 1 3 1 2 0 1 1 3 2 5 5 4 2 1 0 3 1 2 0 0 0 0 3 4 4 1 0 1 1 1 0 0 3 1 1 1 2 0 2 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 1 1 0 1 1 0 1 0 1 1 1 1 1
.............................................................................................................TTGGTGTTACTTCTTGCGGTGA................................................................. 22 2 1 918.00 918 121 81 49 40 47 79 38 33 34 13 30 13 38 18 30 17 24 25 18 15 17 10 6 11 9 4 14 6 7 5 4 3 5 0 3 0 6 0 3 2 2 4 0 0 1 6 0 0 1 0 2 1 3 0 2 1 2 1 0 1 0 1 0 0 1 1 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCAGTG.................................................................. 21 1 1 481.00 481 64 23 9 11 13 2 20 24 8 11 5 2 54 38 14 1 6 3 10 8 0 1 2 13 5 1 2 3 5 8 11 5 5 0 2 0 3 0 11 18 4 2 0 0 0 2 1 0 0 0 2 1 4 0 6 0 0 2 0 2 0 3 0 0 3 2 0 2 0 0 0 0 0 1 0 1 0 3 0 0 2 2 0 0 0 2 3 0 1 1 1 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTAATCATCA........................................................................................................... 20 0 1 359.00 359 2 18 31 31 28 1 17 20 15 8 16 3 1 0 0 10 3 0 0 38 0 1 5 5 0 0 0 0 0 25 0 44 22 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTAATCATCAAAGC....................................................................................................... 24 0 1 280.00 280 16 9 37 18 21 2 26 18 12 8 13 5 1 6 1 3 4 3 0 2 1 2 1 10 0 0 1 1 0 2 1 2 2 18 1 21 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CTGGTGTTACTTCTTGCAGTGA................................................................. 22 2 1 237.00 237 12 7 7 3 1 2 1 1 2 27 2 70 1 1 0 77 1 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTAATCATCAAAG........................................................................................................ 23 0 1 229.00 229 1 14 38 30 12 7 15 8 11 9 4 4 0 0 1 3 6 0 1 5 0 2 1 6 0 0 2 0 0 1 0 1 6 8 0 14 0 0 1 2 0 0 2 0 0 0 0 0 2 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTAATCATCAA.......................................................................................................... 21 0 1 174.00 174 25 15 20 13 10 0 8 6 11 7 13 2 0 0 1 3 6 0 3 10 0 0 2 0 0 0 0 0 0 1 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCAGTGC................................................................. 22 2 1 168.00 168 2 1 0 4 5 6 0 0 6 40 2 21 0 6 1 11 0 24 1 0 2 1 24 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTACAGTG.................................................................. 21 0 1 163.00 163 30 9 5 5 3 1 3 1 1 2 0 2 7 8 2 2 2 2 0 1 0 0 0 4 1 2 0 1 1 1 0 0 2 0 2 0 0 2 0 0 0 3 3 5 0 1 1 2 0 0 0 3 1 6 0 0 3 0 5 0 0 0 0 1 0 0 0 0 9 3 0 2 1 0 0 0 2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGGGTTACTTCTTGCAGTGA................................................................. 22 2 1 111.00 111 5 8 22 13 9 0 11 3 9 3 13 0 0 2 1 1 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGAGTTACTTCTTGCAGTGA................................................................. 22 2 1 103.00 103 0 21 14 7 6 5 4 1 7 0 5 2 0 0 1 2 0 0 1 0 2 1 0 5 0 0 2 0 0 0 0 1 2 0 0 0 0 0 1 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCCGTGA................................................................. 22 2 1 97.00 97 5 3 0 0 5 2 0 0 4 14 0 18 0 1 3 11 0 16 3 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTTCAGTGA................................................................. 22 1 1 96.00 96 2 0 0 0 4 0 0 0 10 11 4 15 1 8 3 19 0 1 2 0 1 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCAGTGT................................................................. 22 2 2 94.00 188 13 4 2 0 13 5 1 0 7 19 4 7 31 1 19 5 0 2 11 4 0 0 5 0 8 0 0 1 2 2 0 1 1 0 0 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 3 0 1 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................ATGGTGTTACTTCTTGCAGTGA................................................................. 22 2 1 94.00 94 1 0 1 2 2 1 0 0 0 6 1 31 0 17 0 29 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCAGTGAA................................................................ 23 2 1 94.00 94 13 3 1 1 0 0 5 4 4 1 0 0 4 9 11 0 3 0 6 2 0 0 0 0 2 0 1 1 0 3 0 1 1 0 1 0 2 0 1 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTCCTTCTTGCAGTGA................................................................. 22 2 1 88.00 88 0 1 1 0 1 0 0 0 1 52 2 9 0 1 1 9 0 2 1 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGGTACTTCTTGCAGTGA................................................................. 22 2 1 87.00 87 2 12 23 18 1 1 4 1 7 1 4 1 1 0 0 1 0 0 4 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTAATCATCAAA......................................................................................................... 22 0 1 78.00 78 0 2 14 7 9 0 5 5 9 2 7 2 0 0 0 1 1 0 1 1 0 0 0 0 0 0 1 0 0 1 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTTGGTGTTACTTCTTGCAGTGA................................................................. 23 1 1 73.00 73 9 11 3 3 6 6 3 1 3 1 2 0 3 2 0 0 3 0 1 3 2 2 1 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTAATCATC............................................................................................................ 19 0 1 73.00 73 0 0 3 8 2 0 0 1 2 1 0 1 2 2 0 1 0 0 0 11 0 0 0 1 0 0 0 0 0 9 0 10 3 1 0 0 0 0 1 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGCGTTACTTCTTGCAGTGA................................................................. 22 2 1 72.00 72 5 8 2 5 9 2 5 0 5 2 2 2 2 0 1 1 4 0 3 0 1 2 0 0 2 1 1 1 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCAGGGA................................................................. 22 2 1 68.00 68 0 12 23 20 2 0 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTACGGTGA................................................................. 22 1 1 64.00 64 4 9 3 3 0 0 1 1 0 2 5 0 5 1 0 0 4 5 1 2 2 2 2 0 1 2 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTATTGCAGTGA................................................................. 22 2 1 61.00 61 9 1 11 5 5 0 12 3 5 1 4 0 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CTGGTGTTACTTCTTACAGTGA................................................................. 22 1 1 60.00 60 0 4 2 2 1 0 0 0 0 11 0 16 0 3 0 14 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGGTGTTACTTCTTGCAGTGA................................................................. 21 1 1 58.00 58 0 5 2 0 6 3 7 3 4 1 6 0 0 2 2 3 5 2 2 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.............................................................................................................TTGGACTTACTTCTTGCAGTGA................................................................. 22 3 1 3.00 3 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCAGAAA................................................................. 22 3 2 3.00 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGAGTTACTTATTGCAGTGA................................................................. 22 3 3 3.00 9 0 1 4 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTAATCATCAAATC....................................................................................................... 24 1 1 3.00 3 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGAGTTACTTCTTACAGTGT................................................................. 22 2 1 3.00 3 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGGAATCATCAA.......................................................................................................... 21 1 1 3.00 3 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACGTCTTGCAGTG.................................................................. 21 2 1 3.00 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGGGTTAGTTCTTGCAGTGA................................................................. 22 3 1 3.00 3 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTATAGTG.................................................................. 21 1 1 3.00 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGTGTTACTTCTTGCAGTGATC............................................................... 24 3 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGGGTTACTTCGTGCAGTGA................................................................. 22 3 1 3.00 3 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TCTGTAAATTGTAATCATCAA.......................................................................................................... 21 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAAATTGTACTCATCA........................................................................................................... 20 1 1 3.00 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGAGTTACTTATTACAGTGA................................................................. 22 2 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGGGTTACGTCTTACAGTGA................................................................. 22 2 1 3.00 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCTGTAGATTGTAATCATCA........................................................................................................... 20 1 1 3.00 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CCTCTTTTATAGTGCGTATGCGGCGCAACAAAGCGACGTACACTCTCTTAAGGCACCGACCGTAGCGAGCGACATTTAACATTAGTAGTTTCGCAAAAGAGTCTCGGCGAACCACAATGAAGAATGTCACTCACACGGTCAGGCATGTGTCTTTCTTTTGGGGATAACTATATTGGTAAATTAAAAGTTAACAGTT
**************************************************.((((((((.((((((((((((...((((.((((((.(((((((...)))).)))))))))))))...))))))))))))))))))))....****************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM609227
CMEW1 Cl.8+ cell		 GSM609222
ML-DmBG1-C1		 GSM628272
ago2[414] ovary total RNA
 SRR029028
untreated (mock)
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1		 V0642
ago2 ovary, AGO1-IP, reseq
AGO1		 GSM609234
CS  male total RNA  
 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2		 GSM628271
r2d2[1] ovary total RNA  
 GSM609229
embryo 2-6hr
 SRR029033
lacZ knockdown
 GSM399107
male body #2
 V077
cold, female head
 V0632
wt ovary AGO1-IP, reseq
AGO1		 GSM609226
CMEW1 Cl.8+ cell		 SRR031703
Total small RNAs from r2d2 homozygous flies
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 V086
female body, aged
 SRR060643
A2_testes_total
 V138
Male cold body
 SRR029608
total small RNAs from hen1 heterozygous flies
 GSM180329
adult bodies (female bodies, male bodies)
 GSM280084
loqs-/- ovaries (18-29nt)
 GSM240749
female head
 GSM322543
male head #1
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 SRR014280
Ovary_rep1_w1118_P
 SRR060644
A2_ovaries_total
 GSM609248
ML-DmD9 cell		 GSM609233
r2d2[1], ovary, AGO1IP
AGO1		 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1		 V142
Oxidation_female_body
 GSE24545
CS ovary total RNA
 GSM399101
kc167 cell		 V091
fGS/OSS total  		 GSM609224
female, one day
 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 V092
dcr-2[G31R] male total RNA  
 V145
S2-DRSC		 V074
S3		 SRR014272
Embryo_0-2hrs_rep1_wK_0_2hr_Emb
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 GSM609217
MLDmD20c5		 V129
ML-DmBG1-c1		 SRR010953
Aub heterozygotes, oxidized
 V008
S2-DRSC		 SRR029633
total small RNAs from hen1 homozygous flies
 GSM379057
Krimp Mutant
 V015
DreRFHV148h
 GSM609238
embryo 14-24hr
 V073
mbn2 		SRR010954
Aub trans-heterozygotes, oxidized
 SRR031692
Total small RNAs from Oregon R
 GSM609223
male, one day
 GSM286607
6-10h #1 (10)
 GSM360262
0-2d pupae
 SRR001348
ago2_oxidized
 SRR097865
Drosophila S2-NP cells
 GSM609218
Sg4		 V032
S1 cell		 V034
ML-DmD16c3 cell		 GSM609230
CS,ovary,AGO1IP
AGO1		 V139
Cold_female_body
 GSM609219
GM2 cell		 GSM609237
ago2[414] ovary total RNA
 GSM286606
2-6h #2 (9)
 SRR097866
Drosophila S2-NP cells
 GSM371638
S2-NP		 SRX247212
AGO1-IP from S2-R+, FLAG-HA-AGO2
AGO1		 SRR001347
ago2_untreated
 V133
Sg4 		SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 V130
ML-DmBG3-c2 		GSM609241
s2+48 #1
 GSM609225
ML-DmBG3-C2		 GSM322533
female head #1
 SRR060646
yw67c23(2)_ovaries_total
 SRR060650
A1_testes_total
 V080
Starvation, female head
 V141
Heat_female_body
 GSM361908
s2-48 Biological Replicate #2
 SRR065152
Piwi bound piRNAs from tj GAL4 > RNAi-piwi ovaries
 GSM609231
ago2[414], ovary, AGO1IP
AGO1		 V031
GM2 cell		 GSM609221
1182-4H cell		 V146
S1 cell		 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
...............................................................................................................................CAATCACGCGGTCCGGCATGT................................................ 21 3 1 27.00 27 0 0 7 0 0 1 1 0 2 0 0 2 2 2 0 1 0 0 1 1 0 1 1 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGATAACTCTATTGATAAC................ 21 3 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TTGGGGATAACTCTATTGATA.................. 21 2 1 8.00 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AATCACGCGGTCCGGCATGT................................................ 20 3 3 4.67 14 0 0 1 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTTTCTTTTGGGGATACCT........................... 20 2 1 4.00 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGGGGATAACTCTATTGATAA................. 21 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCACGCGGTCCGGCATGT................................................ 18 2 2 2.00 4 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GAGCGACATTAAACATTAGAA............................................................................................................. 21 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GCGGCGCGACATAGCGACCTA............................................................................................................................................................ 21 3 3 2.00 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ACACTTAAGAATGTCACTGACA............................................................. 22 3 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GGGATAACTCTATTGATAACT............... 21 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ATTGGGGATAACTCTATTGAT................... 21 3 2 2.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGCGACAGTAAACATTAGAAG............................................................................................................ 21 3 6 1.83 11 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATCACGCGGTCCGGCATGT................................................ 19 3 11 1.45 16 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0
...................................................................AGCGACAGTTCACATTAGAAG............................................................................................................ 21 3 3 1.33 4 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GAGCGACAGTAAACATTAGAA............................................................................................................. 21 3 3 1.33 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ACTCTTAAGAATGTCACTCACA............................................................. 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TTGGGGATAACTCTATTGATAA................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GAGTCTTGACGAACAACAATGA............................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AGTAGTTTCGAGAGAGAGTCT............................................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GAGCGACAGTGCACATTAGTA............................................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTGACACGGGCAGGCATGTGT.............................................. 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGCGACATTGCACATTAGAAG............................................................................................................ 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGATAACTCTATTGATAA................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TAGTAGTTTCGAAAAAGAGTTT............................................................................................ 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ACCCGGTCAGGGATGTGT.............................................. 18 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AGCGTAAGCGGCGCAAGAAAG................................................................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GGGAGCGACAGTAAACATTAG............................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CGTCGAGCCACAAGGAAGAAT....................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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...................................................................................AGTAGTTTCGAACGAGAGT.............................................................................................. 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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........................................................................................................................AGTATGTAACTCACACGGTA........................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTCTTTCTTTTGGTGATT.............................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGATACCTATATTCGTACA................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTCACACGTTCAGGCAAAT................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCTTTTCGGGATAACTATGG....................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CGAGCGACAGTTCAGATT................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CACTCGCTTTAGGCACAGA......................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GTGTCTTTGTTTTGGGGTTAT............................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTGGTAAATTGAAAGTTATTA... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TGTGAGAACTATATTGGTA.................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCCGCTCACACGGTCAGG..................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GGGGCAACAAAGTGACTTA............................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dm3 chrX:12956055-12956250 + dme-mir-971 GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTA------------------------------------------------------TTG----------------------ATAT---AACC------------ATTTAATTTTCAATT-GT---------------------------------CAA------
droSim2 x:12305284-12305476 + dsi_358 GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTT------------------------------------------------------TTG----------------------AAAA---AACC------------ATTTAA---ACAATT-GT---------------------------------CAA------
droSec2 scaffold_21:701183-701375 + dse_66 GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTT------------------------------------------------------TTG----------------------AAAA---AACC------------ATTTAA---ACAATT-GT---------------------------------CAA------
droYak3 X:7229735-7229924 + dya_52 GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------A-CCCCTTTAAGAAAAAACACA-----------------------------------------A----------------------AAAA---AACC------------A-----------------------------------------------------------
droEre2 scaffold_4690:13914687-13914894 - der_60 GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCCCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTT-C-------------CTTTGGTACATAACAAAAAAATAAATAAATAAAAAAACATTG---------------------------------------------------------------------------------------------------------
droEug1 scf7180000409110:1404429-1404625 + GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACACAGAAAGAAAATATGAAGAAGAAGA-ACCC----------------------------------------------------------------------------------------------------------------------------------TA-------AAAAAAAG--ATGAAAAA------
droBia1 scf7180000298389:643146-643336 + GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCCCGCTGTAAATTGTAATCATCAAAGCGTT-TTTC-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--CAGAGAAAA-------------C-CCCTT------------------------------------------------------TT-----------------CCCCTGGAAA---AACCAATT------------GA---------------------------------------------AAG------
droTak1 scf7180000413998:42773-42993 + GAA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA---------AAATAACCCTT------------------------------------------------------TTGCCGAAAAAGAAAAAATCCCCTGAAAACCAAACCATTC------------GA---------------------------------------------GAGTCCGAA
droEle1 scf7180000490546:934527-934713 - GAA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TTTC-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGCC---CGTACACA--GAAAGAAAT----------------------------------------------------------------------------------------------------AAA---AACTCATTGAAATATCCCTTGA---AT-------------------------------------------------
droRho1 scf7180000779914:464105-464309 - GAA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGTTCGCTGTAAATTGTAATCATCAAAGCGTT-TTTT-TC--AGAACCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-TCCCT------------------------------------------------------TTG--------------------------------------------------A---A----------AGCTCCTTAAGGCAATAAAAAAAGACATCACCAA------
droFic1 scf7180000454050:893073-893269 + GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCCCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--AAGAGAAAA-------------C-CCCAT------------------------------------------------------ATG----------------------AAA----------------CCCCCTTTGA---ACAACCAGTAAAACTC-----------------------------------
droKik1 scf7180000302544:775468-775623 - A-----------------GAAAATATCACGCATACGCCGCGTT--------------CAGAGCGAAA--------TTCCTTGGCTGGCAGCGCACACTGTAAATTGTAATCATCAAAGCGTT-TTTC-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGCGCCAGTA-CACGTACACACGGCAAGAAAG-------------A-ACCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:3891749-3891909 + dan_51 AGA---------------GAAAATATCACGCATACGCCACGTTGTTTCGCTGCATGTGAGAA---AA--------TTCCGTGGCTGGCATCGTTCACTGTAAATTGTAACCATCAAAGCGTT-TTTTATC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGAGCCAGCT---GGAGCACA--TATTAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396383:483175-483341 - AGCAACCAAAAAAAATTAAAGAATATCACGCATACGCCACGTTGTTTCGCTGCATGTGAGAA---AA--------TTCCGTGGCTGGCATCGTTCACTGTAAATTGTAACCATCAAAGCGTT-TTTTATC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGAGCCAGCT---GGAGCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3a:1391638-1391775 - dps-mir-971 AT--------------------ATATTACGGCTACGCCGCGT---GTCTCAGCATGTGAGAG---AGCGGCTCCTTTCCCTGGACCCCATCGCTCGCTGTAAATTGTAATGGCCAAAGCTTT-TTTGTTG--GTAGCAGCTTGGTGTTACTTCTTACAGTGAGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_52:413280-413417 + dpe_90 AT--------------------ATATTACGGCTACGCCGCGT---GTCTCAGCATGTGAGAG---AGCGGCTCCTTTCCCTGGACCCCATCGCTCGCTGTAAATTGTAATGGCCAAAGCTTT-TTTGTTG--GTAGCAGCTTGGTGTTACTTCTTACAGTGAGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:6691507-6691626 - dwi_36 AAA---------------TA----ATTGCGCATACGCCGCGTTATAC-------------------A--------TTAAACGGCCCAATACGCTCGCTGTAAATTGTAGCAATCAAAGCGTTGCCTTT-TGCCTCACAGCTTGGTGTTACTTCTTACAGTGAGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12928:4279775-4279864 - dvi-mir-971 TGA---------------AATGACGTCAC--------------------------------------------------------------GCCCGCTGTAAAATGTAATCATCAGAGCGTC-CT-C-TC----AACCGCTTGGTGTTACTTCTTACAGTGAGTGCGACGGCC---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6328:350122-350197 + dmo_78 C------------------------------------------------------------------------------------------GACCGCTGTAAATTGTAATCATCAAAGCGTC-TG-C-TA----AATCGCTTGGTGTTACTTCTTACAGTGAGCGCGGCGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14853:994424-994545 - dgr_60 AGATGCCACG--AACTTGAATGACGTC--------------------------------------------------------------ACGCCCGCTGTAATATGTAATCATCAAAGCGTG-TATTT-T----ACTCGCTTGGTGTTACTTCTTACAGTGAGTGCGACGGCCACACGTCCAGC--GGAGGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dm3
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTA------------------------------------------------------TTG----------------------ATAT---AACC------------ATTTAATTTTCAATT-GT---------------------------------CAA------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2214185.004185000018000018591001010800002800001511710300000000000000001010000011114000000000000000000001259111102810727672418181775102151635841064405152085223929950490274416914824359000000000000000000000000000000000000931320156201191326132116862593000000407000000000000000000000000000100001603240261001000022170314000028030001165003000007101000000000100300111136371401110010060033010000120000400028431910007512
...............................................................................................GCTGTAAATTGTAATCATCA......................................................................................................................................................................................................................................................................201359.003590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000005000001103181000000000000000000000000000000000000015280160031702013103150000018000000000000000000000000000000000000000000000000000300002302000000000000000000000000000000000025224438000000000000100000000000000000010001000100
...............................................................................................GCTGTAAATTGTAATCATCAAAGC..................................................................................................................................................................................................................................................................241280.0028000001000000000000000000000000001821010000000000000000000000000000000000000000000000000000000001006001000160000010010100013010122051830000000000000000000000000000000000001221013004260180182371000000900000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010002222030000000000000000000000000000110000000000
...............................................................................................GCTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................231229.002290000000000000000000000000000011814000000000000000000000000000000000000000000000000000000000001000000000100000000000000100002270429300000000000000000001000000000000000011120400615181302386000001400000000000000000000000000000000000000000000000000020000310100000100000000000000000000000000001615020100000000000000000000000000000000000000
...............................................................................................GCTGTAAATTGTAATCATCAA.....................................................................................................................................................................................................................................................................211174.0017400000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000025000000000000002000000002173000000000000000000000000000000000000111001301680601302000000015000000000000000000000000000000000000000000000000000000001001000003000000000000000000000000000018410001000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................211163.001630000000000000000000100005000000000000010000000000000000001310000000000000000000001000000600020183022013020002000102030020000010202200000000000000000000000000000000000013000023010505400000900000000000000000000000000000000000000000000000310000000000000010000100000900000000000000000001201030000000000000000000200000000070010000452
...............................................................................................GCTGTAAATTGTAATCATCAAA....................................................................................................................................................................................................................................................................22178.00780000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002021000000000000000000000000000000000000990700151517014000000200000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000001331000000000000000000000000000000000000000000
...............................................................................................GCTGTAAATTGTAATCATC.......................................................................................................................................................................................................................................................................19173.007300000000000000000000000000000311000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000013110000000000000000000000000000000000002200000011380310000000000000000000000000000000000000000000000000000000003000001000000000000000000000000000000000000931011000000000000000000000000000000020000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................22146.0046000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000009001000100000000000000000010000000105200000000000000000000000000000000000001010002000000000000100000000000000000000000000000000000000000000000100010000100000000000100000100000000000001010000001010000000010000000000100000000040000000111
............................................................................................................................................TTGGTGTTACTTCTTACAGTGC.......................................................................................................................................................................................................................22134.0034000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000003000000000000000000000380000010418300000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................23128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013001000800000000100000000000000000000000000000000000000000000000000000001000021010100000000200000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000001000000000000000000000000000000020000000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................23126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000110000000000000000000100050000000000000000000000000000000000000000001010001020102000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010030000000000100000000000000000000000000010
...............................................................................................GCTGTAAATTGTAATCAT........................................................................................................................................................................................................................................................................18116.0016000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011200000000000000000000000000000000000002010000010210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAT......................................................................................................................................................................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000001000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000020
................................................................................................................................................TGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................1819.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000001010000000100000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000101100000000000000000000000000000000000011000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................2218.008000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000001000000000000000000001000010000000000000000000000000000000000000000000000010000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAG......................................................................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GCTGTAAATTGTAATCATCAAAGA..................................................................................................................................................................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACA...........................................................................................................................................................................................................................1815.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000
...............................................................................................GCTGTAAATTGTAATCATCAAAGG..................................................................................................................................................................................................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2014.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001
...............................................................................................GCTGTAAATTGTAATCATCAAAGCG.................................................................................................................................................................................................................................................................2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000
droSim2
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTT------------------------------------------------------TTG----------------------AAAA---AACC------------ATTTAA---ACAATT-GT---------------------------------CAA------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221285.0028552062700001813013300000
...............................................................................................GCTGTAAATTGTAATCATCAAAGC..................................................................................................................................................................................................................................................................24196.00966113300000010000000
...............................................................................................GCTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................23190.00907611300000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................22126.0026901600000000100000
...........................................................................TTCCGTGGCTGGCATCGCTC..........................................................................................................................................................................................................................................................................................20116.0016160000000000000000
...............................................................................................GCTGTAAATTGTAATCATC.......................................................................................................................................................................................................................................................................19116.0016160000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2115.00500000000000500000
..................................................................A--------TTCCGTGGCTGGCATCGCTC..........................................................................................................................................................................................................................................................................................2114.00430100000000000000
................................................................................................................................................TGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................1812.00200000000110000000
............................................................................................................................................TTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................1912.00210100000000000000
...............................................................................................GCTGTAAATTGTAATCATCAAAGA..................................................................................................................................................................................................................................................................2411.00100000000010000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2311.00100100000000000000
...............................................................................................GCTGTAAATTGTAATCATCAAA....................................................................................................................................................................................................................................................................2211.00100000000010000000
.................................................................AA--------TTCCGTGGCTGGCATCGCTC..........................................................................................................................................................................................................................................................................................2211.00110000000000000000
droSec2
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTT------------------------------------------------------TTG----------------------AAAA---AACC------------ATTTAA---ACAATT-GT---------------------------------CAA------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221177.001776012645
...............................................................................................GCTGTAAATTGTAATCATCA......................................................................................................................................................................................................................................................................20128.002811125
...............................................................................................GCTGTAAATTGTAATCATCAA.....................................................................................................................................................................................................................................................................21112.001200012
...............................................................................................GCTGTAAATTGTAATCATCAAA....................................................................................................................................................................................................................................................................2217.0070007
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2116.0060051
...............................................................................................GCTGTAAATTGTAATCATC.......................................................................................................................................................................................................................................................................1915.0050005
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2315.0050050
...............................................................................................GCTGTAAATTGTAATCATCAAAGC..................................................................................................................................................................................................................................................................2415.0051013
...............................................................................................GCTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................2313.0031002
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2212.0020020
...........................................................................TTCCGTGGCTGGCATCGCTC..........................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................CGCTGTAAATTGTAATCATCAA.....................................................................................................................................................................................................................................................................2211.0010001
...............................................................................................GCTGTAAATTGTAATCATCAAAGCG.................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2211.0010010
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2111.0011000
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2011.0010001
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................2211.0010010
.................................................................................................................CAAAGCGTT-TT-C-TC--AGGC.................................................................................................................................................................................................................................................1880.1311000
droYak3
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------A-CCCCTTTAAGAAAAAACACA-----------------------------------------A----------------------AAAA---AACC------------A-----------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221227.00227111113863022000
...............................................................................................GCTGTAAATTGTAATCATCAAAGC..................................................................................................................................................................................................................................................................24169.0069281390100000
...............................................................................................GCTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................23136.003629241000000
...............................................................................................GCTGTAAATTGTAATCATCA......................................................................................................................................................................................................................................................................20110.00100100540000
...........................................................................TTCCGTGGCTGGCATCGCTC..........................................................................................................................................................................................................................................................................................20110.00109010000000
..................................................................A--------TTCCGTGGCTGGCATCGCTC..........................................................................................................................................................................................................................................................................................2116.0065010000000
............................................................................................................................................TTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................1916.0060060000000
...............................................................................................GCTGTAAATTGTAATCATC.......................................................................................................................................................................................................................................................................1914.0043100000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2114.0040040000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2314.0041111000000
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2114.0040400000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2313.0030021000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................2212.0021001000000
...............................................................................................GCTGTAAATTGTAATCATCAAAGCG.................................................................................................................................................................................................................................................................2512.0021001000000
...............................................................................................GCTGTAAATTGTAATCATCAA.....................................................................................................................................................................................................................................................................2111.0010000010000
............................................................................TCCGTGGCTGGCATCGCTC..........................................................................................................................................................................................................................................................................................1911.0011000000000
.............................................................................................................................................TGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2011.0010010000000
droEre2
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCCCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-CCCTT-C-------------CTTTGGTACATAACAAAAAAATAAATAAATAAAAAAACATTG---------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221231.002313945166179
...............................................................................................GCTGTAAATTGTAATCATCA......................................................................................................................................................................................................................................................................20145.00450060138
...............................................................................................GCTGTAAATTGTAATCATCAAAGC..................................................................................................................................................................................................................................................................24129.002911201114
...............................................................................................GCTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................23126.00260121022
...............................................................................................GCTGTAAATTGTAATCATCAA.....................................................................................................................................................................................................................................................................21122.00220000022
...............................................................................................GCTGTAAATTGTAATCATCAAA....................................................................................................................................................................................................................................................................22122.00221000021
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................21115.0015240504
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2115.005500000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2315.005040001
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2212.002001100
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2312.002000002
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2012.002000002
................................................................................................CTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................2212.002200000
...............................................................................................GCTGTAAATTGTAATCATCAAAGCG.................................................................................................................................................................................................................................................................2512.002000002
............................................................................................................................................TTGGTGTTACTTCTTACAGTGC.......................................................................................................................................................................................................................2212.002001100
...............................................................................................GCTGTAAATTGTAATCAT........................................................................................................................................................................................................................................................................1812.002000002
...............................................................................................GCTGTAAATTGTAATCATCAAAA...................................................................................................................................................................................................................................................................2311.001000001
............................................................................................................................................TTGGTGTTACTTCTTACAGTGTA......................................................................................................................................................................................................................2311.001000100
..............................................................................................CGCTGTAAATTGTAATCATCA......................................................................................................................................................................................................................................................................2111.001000001
...............................................................................................GCTGTAAATTGTAATCATC.......................................................................................................................................................................................................................................................................1911.001000001
...............................................................................................GCTGTAAATTGTAATCATCG......................................................................................................................................................................................................................................................................2011.001000001
..............................................................................................CGCTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................2411.001000001
...........................................................................TTCCGTGGCTGGCATCGCCC..........................................................................................................................................................................................................................................................................................2011.001100000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAC......................................................................................................................................................................................................................2311.001010000
.................................................................AA--------TTCCGTGGCTGGCATCGCCC..........................................................................................................................................................................................................................................................................................2211.001000001
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2211.001100000
................................................................................................................................................TGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................1811.001000100
........................................................................................................................................................................CAGTC---CGTACACA--GAAAGAAAA-------------.........................................................................................................................................................................2211.001000001
droEug1
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACACAGAAAGAAAATATGAAGAAGAAGA-ACCC----------------------------------------------------------------------------------------------------------------------------------TA-------AAAAAAAG--ATGAAAAA------SizeHit CountTotal NormTotal
No Reads
droBia1
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCCCGCTGTAAATTGTAATCATCAAAGCGTT-TTTC-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--CAGAGAAAA-------------C-CCCTT------------------------------------------------------TT-----------------CCCCTGGAAA---AACCAATT------------GA---------------------------------------------AAG------SizeHit CountTotal NormTotal
No Reads
droTak1
GAA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA---------AAATAACCCTT------------------------------------------------------TTGCCGAAAAAGAAAAAATCCCCTGAAAACCAAACCATTC------------GA---------------------------------------------GAGTCCGAASizeHit CountTotal NormTotal
No Reads
droEle1
GAA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCTCGCTGTAAATTGTAATCATCAAAGCGTT-TTTC-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGCC---CGTACACA--GAAAGAAAT----------------------------------------------------------------------------------------------------AAA---AACTCATTGAAATATCCCTTGA---AT-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GAA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGTTCGCTGTAAATTGTAATCATCAAAGCGTT-TTTT-TC--AGAACCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--GAAAGAAAA-------------C-TCCCT------------------------------------------------------TTG--------------------------------------------------A---A----------AGCTCCTTAAGGCAATAAAAAAAGACATCACCAA------SizeHit CountTotal NormTotal
No Reads
droFic1
GGA---------------GAAAATATCACGCATACGCCGCGTTGTTTCGCTGCATGTGAGAG---AA--------TTCCGTGGCTGGCATCGCCCGCTGTAAATTGTAATCATCAAAGCGTT-TT-C-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGTGCCAGTC---CGTACACA--AAGAGAAAA-------------C-CCCAT------------------------------------------------------ATG----------------------AAA----------------CCCCCTTTGA---ACAACCAGTAAAACTC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A-----------------GAAAATATCACGCATACGCCGCGTT--------------CAGAGCGAAA--------TTCCTTGGCTGGCAGCGCACACTGTAAATTGTAATCATCAAAGCGTT-TTTC-TC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGCGCCAGTA-CACGTACACACGGCAAGAAAG-------------A-ACCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AGA---------------GAAAATATCACGCATACGCCACGTTGTTTCGCTGCATGTGAGAA---AA--------TTCCGTGGCTGGCATCGTTCACTGTAAATTGTAACCATCAAAGCGTT-TTTTATC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGAGCCAGCT---GGAGCACA--TATTAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221223.00223187812104101
...............................................................................................ACTGTAAATTGTAACCATCAAAGC..................................................................................................................................................................................................................................................................24129.002911501012
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................21126.00261311119
...............................................................................................ACTGTAAATTGTAACCATCAAAG...................................................................................................................................................................................................................................................................2316.006010005
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2115.005400001
...............................................................................................ACTGTAAATTGTAACCATCA......................................................................................................................................................................................................................................................................2014.004100003
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2313.003120000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2313.003030000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAAA.....................................................................................................................................................................................................................2413.003020001
...............................................................................................ACTGTAAATTGTAACCATCAAA....................................................................................................................................................................................................................................................................2213.003000003
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2213.003001101
............................................................................................................................................TTGGTGTTACTTCTTACAGTGC.......................................................................................................................................................................................................................2212.002011000
.......................................................................................................................GTT-TTTTATC--AGAGCCGC.............................................................................................................................................................................................................................................1812.002020000
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2012.002000101
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2311.001000001
...............................................................................................ACTGTAAATTGTAACCATCAA.....................................................................................................................................................................................................................................................................2111.001000001
...............................................................................................ACTGTAAATTGTAACCATCAAAGT..................................................................................................................................................................................................................................................................2411.001000001
............................................................................................................................................TTGGTGTTACTTCTTACAGTA........................................................................................................................................................................................................................2111.001001000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2211.001000001
............................................................................................................................................TTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................1911.001100000
...............................................................................................ACTGTAAATTGTAACCATCAAAGCT.................................................................................................................................................................................................................................................................2511.001000001
droBip1
AGCAACCAAAAAAAATTAAAGAATATCACGCATACGCCACGTTGTTTCGCTGCATGTGAGAA---AA--------TTCCGTGGCTGGCATCGTTCACTGTAAATTGTAACCATCAAAGCGTT-TTTTATC--AGAGCCGCTTGGTGTTACTTCTTACAGTGAGTGAGCCAGCT---GGAGCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AT--------------------ATATTACGGCTACGCCGCGT---GTCTCAGCATGTGAGAG---AGCGGCTCCTTTCCCTGGACCCCATCGCTCGCTGTAAATTGTAATGGCCAAAGCTTT-TTTGTTG--GTAGCAGCTTGGTGTTACTTCTTACAGTGAGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221538.00538020311864109355004
...............................................................................................GCTGTAAATTGTAATGGCCAAAGC..................................................................................................................................................................................................................................................................24170.00700818301040000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................23142.004204255620000
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................21124.002401041261000
...............................................................................................GCTGTAAATTGTAATGGCCAAAGCT.................................................................................................................................................................................................................................................................25114.00140247100000
...............................................................................................GCTGTAAATTGTAATGGCCAAAG...................................................................................................................................................................................................................................................................23112.00120700050000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................22111.00110000380000
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................21110.001001000000000
...............................................................................................GCTGTAAATTGTAATGGCCA......................................................................................................................................................................................................................................................................2018.0080400040000
...............................................................................................GCTGTAAATTGTAATGGCCAAA....................................................................................................................................................................................................................................................................2217.0070001050001
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2316.0060301000002
............................................................................................................................................TTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................1914.0040021010000
...............................................................................................GCTGTAAATTGTAATGGCCAA.....................................................................................................................................................................................................................................................................2114.0040101020000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2213.0030110100000
...............................................................................................GCTGTAAATTGTAATGGCCAAAGCC.................................................................................................................................................................................................................................................................2512.0020002000000
................................................................................................................................................TGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................1812.0020100100000
............................................................................TCCCTGGACCCCATCGCTC..........................................................................................................................................................................................................................................................................................1912.0020002000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAAA.....................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGC.........................................................................................................................................................................................................................2111.0010001000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................2011.0010010000000
................................................................................................CTGTAAATTGTAATGGCCAAAGCT.................................................................................................................................................................................................................................................................2411.0010000010000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGC.......................................................................................................................................................................................................................2211.0010000010000
................................................................................................CTGTAAATTGTAATGGCCAAAGA..................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................TGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2011.0010100000000
..........................................................................TTTCCCTGGACCCCATCGCTC..........................................................................................................................................................................................................................................................................................2111.0010001000000
..............................................................................................................................................GGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................2211.0010010000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2111.0010000100000
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2011.0010000100000
.................................................................................................TGTAAATTGTAATGGCCAAAGCT.................................................................................................................................................................................................................................................................2311.0010001000000
.......................................................................................................................TTT-TTTGTTG--GTAGCAGC.............................................................................................................................................................................................................................................1821.0020020000000
............................................................................................................................................TTGGTGTTACTTCTTACAC..........................................................................................................................................................................................................................1911.0010010000000
droPer2
AT--------------------ATATTACGGCTACGCCGCGT---GTCTCAGCATGTGAGAG---AGCGGCTCCTTTCCCTGGACCCCATCGCTCGCTGTAAATTGTAATGGCCAAAGCTTT-TTTGTTG--GTAGCAGCTTGGTGTTACTTCTTACAGTGAGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221192.0019224234653424
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................21119.0019024931
...............................................................................................GCTGTAAATTGTAATGGCCAAAG...................................................................................................................................................................................................................................................................2319.009000540
...............................................................................................GCTGTAAATTGTAATGGCCAAAGCT.................................................................................................................................................................................................................................................................2519.009001260
...............................................................................................GCTGTAAATTGTAATGGCCA......................................................................................................................................................................................................................................................................2018.008020240
...............................................................................................GCTGTAAATTGTAATGGCCAAA....................................................................................................................................................................................................................................................................2217.007000340
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2316.006011310
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................2215.005500000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2215.005000230
...............................................................................................GCTGTAAATTGTAATGGCCAA.....................................................................................................................................................................................................................................................................2114.004010030
...........................................................................TTCCCTGGACCCCATCGCTC..........................................................................................................................................................................................................................................................................................2014.004000220
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2213.003000201
.......................................................................................................................TTT-TTTGTTG--GTAGCAGC.............................................................................................................................................................................................................................................1823.006300030
.................................................................................................TGTAAATTGTAATGGCCAAAGCT.................................................................................................................................................................................................................................................................2313.003000120
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2113.003020100
...........................................................................................................................................CTTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2113.003100110
...............................................................................................GCTGTAAATTGTAATGGCCAAAT...................................................................................................................................................................................................................................................................2312.002000020
...............................................................................................GCTGTAAATTGTAATGGCCAAAGC..................................................................................................................................................................................................................................................................2412.002020000
............................................................................TCCCTGGACCCCATCGCTC..........................................................................................................................................................................................................................................................................................1911.001000010
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2311.001000010
...............................................................................................GCTGTAAATTGTAATGGCCAAT....................................................................................................................................................................................................................................................................2211.001000001
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2011.001000010
............................................................................................................................................TTGGTGTTACTTCTTACA...........................................................................................................................................................................................................................1811.001010000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2311.001001000
...............................................................................................GCTGTAAATTGTAATGGCC.......................................................................................................................................................................................................................................................................1911.001000010
droWil2
AAA---------------TA----ATTGCGCATACGCCGCGTTATAC-------------------A--------TTAAACGGCCCAATACGCTCGCTGTAAATTGTAGCAATCAAAGCGTTGCCTTT-TGCCTCACAGCTTGGTGTTACTTCTTACAGTGAGTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2214923.00492343116785403777
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................211449.00449139028399
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................221118.001180107110
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................22182.0082780022
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................20174.0074331166
...............................................................................................GCTGTAAATTGTAGCAATCAAAGC..................................................................................................................................................................................................................................................................24172.00725200128
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................21122.0022015007
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................23120.0020010118
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................23110.001001027
............................................................................................................................................TTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................1917.00731003
............................................................................................................................................TTGGTGTTACTTCTTACAGTGC.......................................................................................................................................................................................................................2215.00500104
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAT......................................................................................................................................................................................................................2314.00400013
.............................................................................................................................................TGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2013.00311001
..............................................................................................................................................GGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2012.00201001
............................................................................................................................................TTGGTGTTACTTCTTACAGTA........................................................................................................................................................................................................................2112.00200002
............................................................................TAAACGGCCCAATACGCTC..........................................................................................................................................................................................................................................................................................1912.00220000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAAA.....................................................................................................................................................................................................................2412.00201100
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2311.00100001
............................................................................................................................................TTGGTGTTACTTCTTACAGTT........................................................................................................................................................................................................................2111.00100001
................................................................................................................................................TGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................1811.00100001
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAGT.....................................................................................................................................................................................................................2411.00100001
............................................................................................................................................TTGGTGTTACTTCTTACAC..........................................................................................................................................................................................................................1911.00110000
.................................................................................................................................................GTTACTTCTTACAGTGAA......................................................................................................................................................................................................................1811.00101000
.............................................................................................................................................TGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2111.00100001
............................................................................................................................................TTGGTGTTACTTCTTACA...........................................................................................................................................................................................................................1811.00100001
.............................................................................................................................................TGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................1911.00100001
.............................................................................................................................................TGGTGTTACTTCTTACAGTGAAA.....................................................................................................................................................................................................................2311.00101000
...............................................................................................GCTGTAAATTGTAGCAATCAAAG...................................................................................................................................................................................................................................................................2311.00101000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2211.00100001
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAG......................................................................................................................................................................................................................2311.00100001
...............................................................................................GCTGTAAATTGTAGCAATC.......................................................................................................................................................................................................................................................................1911.00110000
.................................................................................................................................................GTTACTTCTTACAGTGAT......................................................................................................................................................................................................................18100.10100001
droVir3
TGA---------------AATGACGTCAC--------------------------------------------------------------GCCCGCTGTAAAATGTAATCATCAGAGCGTC-CT-C-TC----AACCGCTTGGTGTTACTTCTTACAGTGAGTGCGACGGCC---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221953.00953054164632000010000783726833029021100001008222212700000530000000000100000004874413
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................211175.00175131530000000000527302117000007111401700000710000000000000000010346
...............................................................................................GCTGTAAAATGTAATCATCAGAGC..................................................................................................................................................................................................................................................................24143.004315090000000000622111023000000000000000020000000000000000000161
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................22135.0035000000000100000001000030000000000500000120000000000000000000337
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................21118.0018001600000000000000000000000000000000000010000000000000000000100
............................................................................................................................................TTGGTGTTACTTCTTACAGTGG.......................................................................................................................................................................................................................22113.0013012000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................23112.001200300000000000110100000000001001010000030000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAT......................................................................................................................................................................................................................2319.00900000000000000000100011000000002000000030000000000000000000100
...............................................................................................GCTGTAAAATGTAATCATCAGAG...................................................................................................................................................................................................................................................................2317.00701000000000000400002000000000000000000000000000000000000000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2317.00700200000000000100100000000000001000000000000000000000000000110
............................................................................................................................................TTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................1914.00400030000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2213.00300000000000000100100000000001000000000000000000000000000000000
...............................................................................................GCTGTAAAATGTAATCATCAGA....................................................................................................................................................................................................................................................................2213.00303000000000000000000000000000000000000000000000000000000000000
.............................................................................................CCGCTGTAAAATGTAATCATCAGAGC..................................................................................................................................................................................................................................................................2613.00301000000000000000000000000000000000000000000000000000000002000
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2013.00300000000000000010100000000000000000000000000000000000000000010
............................................................................................................................................TTGGTGTTACTTCTTACAGTT........................................................................................................................................................................................................................2112.00200000000000000000000110000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGC.......................................................................................................................................................................................................................2212.00200000000000000000100000000000000000000000000000000000000000010
.............................................................................................................................................TGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2111.00100000000000000000000000000000000000000010000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAAA.....................................................................................................................................................................................................................2411.00100000000000000000000000000000000000000010000000000000000000000
................................................................................................................................................TGTTACTTCTTACAGTGAAA.....................................................................................................................................................................................................................2011.00100000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................GTTACTTCTTACAGTGAA......................................................................................................................................................................................................................1811.00100000000000000000000000000000000000000010000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAGTC........................................................................................................................................................................................................................2111.00100100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................1811.00100100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2011.00100100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2011.00100100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2211.00100100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................1911.00100000000000000000000000000000000000000010000000000000000000000
TGA---------------AATGACGTCAC--------------------------------------------------------------GCCC..........................................................................................................................................................................................................................................................................................1811.00101000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGGTGTTACTTCTTACAC..........................................................................................................................................................................................................................1911.00100010000000000000000000000000000000000000000000000000000000000
droMoj3
C------------------------------------------------------------------------------------------GACCGCTGTAAATTGTAATCATCAAAGCGTC-TG-C-TA----AATCGCTTGGTGTTACTTCTTACAGTGAGCGCGGCGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................221543.0054319051435618914
...............................................................................................GCTGTAAATTGTAATCATCAAAGC..................................................................................................................................................................................................................................................................24140.00402111350
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................21123.00232200010
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................23120.00206001121
............................................................................................................................................TTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................21118.0018722340
...............................................................................................GCTGTAAATTGTAATCATCAAAG...................................................................................................................................................................................................................................................................2318.008112040
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2218.008004310
...............................................................................................GCTGTAAATTGTAATCATCA......................................................................................................................................................................................................................................................................2017.007103300
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAA......................................................................................................................................................................................................................2313.003200001
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAT......................................................................................................................................................................................................................2313.003210000
............................................................................................................................................TTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2013.003002010
............................................................................................................................................TTGGTGTTACTTCTTACAG..........................................................................................................................................................................................................................1913.003000030
..............................................................................................................................................GGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2012.002200000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2212.002010100
...............................................................................................GCTGTAAATTGTAATCATC.......................................................................................................................................................................................................................................................................1912.002002000
...........................................................................................................................................CTTGGTGTTACTTCTTACAGT.........................................................................................................................................................................................................................2112.002000020
.............................................................................................................................................TGGTGTTACTTCTTACAGTG........................................................................................................................................................................................................................2011.001100000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGAC......................................................................................................................................................................................................................2311.001000010
..............................................................................................CGCTGTAAATTGTAATCATC.......................................................................................................................................................................................................................................................................2011.001000100
..............................................................................................CGCTGTAAATTGTAATCATCA......................................................................................................................................................................................................................................................................2111.001000100
...............................................................................................GCTGTAAATTGTAATCATCAAAGA..................................................................................................................................................................................................................................................................2411.001000010
................................................................................................................................................TGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................1811.001010000
............................................................................................................................................TTGGTGTTACTTCTTACAGTGATT.....................................................................................................................................................................................................................2411.001000010
............................................................................................................................................TTGGTGTTACTTCTTACAGTGC.......................................................................................................................................................................................................................2211.001001000
...............................................................................................GCTGTAAATTGTAATCATCAA.....................................................................................................................................................................................................................................................................2111.001000100
droGri2
AGATGCCACG--AACTTGAATGACGTC--------------------------------------------------------------ACGCCCGCTGTAATATGTAATCATCAAAGCGTG-TATTT-T----ACTCGCTTGGTGTTACTTCTTACAGTGAGTGCGACGGCCACACGTCCAGC--GGAGGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................TTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................22111.0011110
..............................................................................................................................................GGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2011.00110
............................................................................................................................................TTGGTGTTACTTCTTACAGTGT.......................................................................................................................................................................................................................2211.00101
...........................................................................................................................................CTTGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2311.00110
.............................................................................................................................................TGGTGTTACTTCTTACAGTGA.......................................................................................................................................................................................................................2111.00110

Generated: 01/24/2015 at 12:01 AM