ID:

dme-mir-961

 Coordinate:

chr2L:5641191-5641279 +

 Confidence:

Known Ortholog

 Type:

intron

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.6 -29.4 -29.2

Sense Strand Reads

ACATGGTATCAAATCAGATTCACCTAATAGAATCCGTAGTGAGCTCGTTATCAAGGGCCGAGTTACCTTTGATCACCAGTAACTGAGATTGTTTCTGATACGGTTTCGTTTTCTGGCAATCAAAAGAACTTGGACTCGACTTGAATTCAACTACTTCGATGGGGCACTCAGGCTATAAGGTAGAGAAAT
****************************************************..((((((((((...((((((..((((.(((.((((((((.......)))))))))))..))))..))))))..))))))).)))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060652
hs-Penelope_testes_total
 SRR060645
yw67c23(2)_testes_total
 V091
fGS/OSS total  		 SRR060643
A2_testes_total
 SRR060650
A1_testes_total
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 GSM609234
CS  male total RNA  
 V092
dcr-2[G31R] male total RNA  
 V0632
wt ovary AGO1-IP, reseq
AGO1
 V138
Male cold body
 SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 V144
OSC		 GSM280085
WT testes (18-24nt)
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 GSM609223
male, one day
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 GSE24545
CS ovary total RNA
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 SRR298536
strain: vret148-60/TM6genotype/variation: Vret Heterozygote
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 SRR032095
AGO1 IP dcr2 knockdown
AGO1
 GSM609230
CS,ovary,AGO1IP
AGO1
 V136
Male aged body
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1
 V012
Dcr2 male (Katsutomo, whole fly?)
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 V015
DreRFHV148h
 GSE24544
dcr-2[L811fsX] ovary total RNA
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 GSM628271
r2d2[1] ovary total RNA  
 GSM399107
male body #2
 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1
 SRR060644
A2_ovaries_total
 GSM628272
ago2[414] ovary total RNA
 SRR014275
Ovary_rep1_LK_P
 GSM399105
disk #2
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 GSM275691
imaginal disc
 GSM379061
Squ Heterozygote
 GSM379063
Vasa Heterozygote
 V142
Oxidation_female_body
 SRR014276
Ovary_rep1_NA(fem)_x_Har(male)_F1
 GSM609237
ago2[414] ovary total RNA
 SRR014274
Ovary_rep1_LK(fem)_x_Har(male)_F1
 GSM379051
Armi Mutant
 V141
Heat_female_body
 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 GSM609232
r2d2[1] ovary total RNA  
 GSM379066
Zuc Mutant
 GSM609238
embryo 14-24hr
 SRR060653
hs-Penelope_ ovaries_total
 GSM609236
dcr-2[L811fsX], ovary, AGO1IP
AGO1
 SRR065801
zuc_het(H-Y)_ovaries
 GSM379057
Krimp Mutant
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 V140
Dessication_female_body
 SRR014281
Ovary_rep1_wK(fem)_x_w1118(male)_F1
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 GSM609231
ago2[414], ovary, AGO1IP
AGO1
 SRR014280
Ovary_rep1_w1118_P
 SRR014282
Ovary_rep1_wK_P
 SRR065800
zuc_H-Y_ovaries
 GSM379056
Krimp Heterozygote
 V078
Desiccation, female head
 V139
Cold_female_body
 GSM379065
Zuc Heterozygote
 SRR060646
yw67c23(2)_ovaries_total
 GSM379064
Vasa Mutant
 SRR014277
Ovary_rep1_NA_P
 GSM379062
Squ Mutant
 SRR014279
Ovary_rep1_w1118(fem)_x_wK(male)_F1
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1
 SRR029030
dcr-2 knockdown
 SRR029033
lacZ knockdown
 GSM379060
SpnE Heterozygote
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 V137
Male aged head
 GSM379053
Aub Mutant
 GSM379059
Piwi Mutant
 GSM379067
SpnE Mutant
 SRR031698
2'-O-methylated small RNAs from dcr-2 heterozygous flies
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1
 V077
cold, female head
 GSM379050
Armi Heterozygote
 SRR032094
ago2 knockdown
 V079
Oxidation, female head
 V131
ML-DmD16-c3 		SRR032092
mock oxidized
 SRR014273
Ovary_rep1_Har_P
 SRR029032
r2d2 knockdown
 GSM379054
Flam Heterozygote
 GSM379055
Flam Mutant
 SRR031703
Total small RNAs from r2d2 homozygous flies
 GSM609224
female, one day
 SRR031699
Total small RNAs from dcr-2 homozygous flies
 SRR097867
Drosophila S2-NP cells
 GSM313161
dcr-2 heterozygous, oxidized
 GSM286602
male body
 GSM379052
Aub Heterozygote
 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 V086
female body, aged
 SRR097866
Drosophila S2-NP cells
 GSM180335
imaginal discs
 GSM360262
0-2d pupae
 V147
1182-4H cell		 SRR097865
Drosophila S2-NP cells
 GSM379058
Piwi Heterozygote
 SRR031692
Total small RNAs from Oregon R
 GSM609240
IR+ 2-18hr
 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2
 GSM385744
OSS_s2		 GSM609244
KC+48 #2
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 SRR060647
A2_ovaries_FLAG-Ago2
AGO2
 GSM609239
IR- 2-18hr
 V006
r2d2 female: possibly heterozygous
 V146
S1 cell		 V128
S3 		SRR029028
untreated (mock)
 GSM385821
OSS_s7		 GSM385748
OSS_s6		 GSM286604
0-1h #3 (7)
 SRR060648
A2_ovaries_FLAG-Aub
 V096
loqsKO/f00791 ovary
 GSM280082
WT ovaries (18-29nt)
 SRR001664
homozygous_dcr-2_untreated
 SRR029633
total small RNAs from hen1 homozygous flies
 SRR031696
Ago1-associated small RNAs from Oregon R
AGO1
 V132
ML-DmD32 		GSM272651
S2-48,+48, KC-48, +48 mix
 SRR010959
Ago3 IP in heterozygotes
AGO3
 SRR065804
Piwi-IP_zuc_H-Y_ovaries
 GSM609247
heat female head
 V036
ML-DmD20c5 cell		 V080
Starvation, female head
 V037
Felix sample +mirtrons
 V074
S3		 SRR032096
AGO2 IP dcr2 knockdown
AGO2
 V073
mbn2 		GSM280083
dcr-2-/- ovaries (18-29nt)
 GSM467729
Dmel_wt_sRNAseq
 GSM322338
2-4day pupae#2
 GSM322533
female head #1
 GSM399106
female body #2
 GSM360260
0-1d Pupae (w)
 SRR001349
heterozygous_dcr-2_untreated
 SRR010954
Aub trans-heterozygotes, oxidized
 SRR341116
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 V148
mbn2 		V038
Felix sample S2 only
 GSM385822
OSS_s8		 GSM399101
kc167 cell		 GSM280088
S2cell (AGO1IP)
AGO1
 GSM322208
3rd instar #2
 GSM322219
2-4day pupae #1
 GSM609242
s2+48 #2
 SRR001345
ago2_non-beta-eliminated
 SRR010958
Piwi IP in Ago3 trans-heterozygotes
 SRR014268
Embryo_0-2hrs_rep1_HAR_0_2hr_Emb
 SRR029031
loqs-ORF knockdown
 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR060649
A2_ovaries_FLAG-Piwi
 SRR060651
A2_ovaries_Ago3
AGO3
 SRR341115
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 SRR341117
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 SRR341118
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 V022
ML-DmD32 cell		 GSM609250
ML-DmD32 cell		 V085
CME W2 wing disc		 V034
ML-DmD16c3 cell		 GSM280087
S2cell (AGO2IP)
AGO2
 V003
dsDcr-1 (katsutomo RNA)
 GSM180329
adult bodies (female bodies, male bodies)
 GSM313162
dcr-2 homozygous, untreated
 GSM313163
dcr-2 heterozygous, untreated
 GSM313164
ago2 homozygous, oxidized (technical replicate #1)
 GSM322245
3rd instar #1
 GSM240749
female head
 SRR001339
WT_females_non-beta-eliminated
 SRR001341
WT_males_non-beta-eliminated
 SRR001343
dcr-2_non-beta-eliminated
 SRR001344
dcr-2_beta-eliminated
 SRR010953
Aub heterozygotes, oxidized
 SRR010960
wt, oxidized
 SRR014269
Embryo_0-2hrs_rep1_LK_0_2hr_Emb
 SRR014270
Embryo_0-2hrs_rep1_NA_0_2hr_Emb
 SRR065152
Piwi bound piRNAs from tj GAL4 > RNAi-piwi ovaries
 SRR065155
Piwi bound piRNAs from tj GAL4 > RNAi-fs(1)Yb ovaries
 GSM609235
CMEL1		 GSM609217
MLDmD20c5		 GSM609251
aged female head
 V014
DTT 8h
 V023
Dcr2 female head
 GSM609221
1182-4H cell		 GSM609226
CMEW1 Cl.8+ cell		 V032
S1 cell		 GSM609229
embryo 2-6hr
 V126
CME L1 		V127
G2		 V129
ML-DmBG1-c1		 GSM399100
Kc167 cell		 SRX247212
AGO1-IP from S2-R+, FLAG-HA-AGO2
AGO1
 SRR032093
ago1 knockdown
 GSM371638
S2-NP		 GSM399110
KC-48 #2
 GSM343833
S2R+ cell
...................................................................TTTGATCACCAGTAACTGAGAT.................................................................................................... 22 0 1 29599.00 29599 6440 5881 2960 2525 2063 1094 918 786 707 512 285 394 172 299 269 248 304 177 250 201 173 91 192 130 138 84 128 119 100 0 76 101 62 84 30 74 72 71 48 22 38 19 39 34 44 35 37 35 35 37 0 35 29 37 32 31 33 20 16 29 19 17 20 28 27 24 15 12 28 19 23 18 17 16 20 17 12 17 16 16 11 16 14 15 1 8 7 12 14 7 0 0 10 5 10 12 3 11 6 4 0 1 8 0 5 2 3 1 7 1 7 5 7 0 4 0 5 4 5 6 4 2 1 1 0 0 6 2 4 3 3 1 5 0 3 4 0 2 0 0 0 3 1 2 1 1 0 1 1 1 0 0 2 0 0 0 1 0 1 0 0 2 2 2 1 2 2 1 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 1 0 0 1 0 1 1 1 1 1 1 1 0 0 0 0 0 0
...................................................................TTTGATCACCAGTAACTGAGA..................................................................................................... 21 0 1 3974.00 3974 655 820 422 321 321 178 128 112 74 88 40 71 94 40 71 47 13 35 13 19 26 28 6 9 30 10 14 19 13 1 16 7 8 7 8 11 8 4 9 1 8 0 3 1 6 2 5 1 2 2 0 1 3 2 0 4 3 5 2 4 4 2 6 4 3 3 0 10 1 3 3 2 6 2 2 2 6 3 0 2 3 1 1 0 0 3 5 0 0 4 0 0 0 0 2 1 0 0 3 0 0 1 2 0 2 2 2 0 1 0 0 1 0 0 0 2 0 0 0 1 3 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTCGTTTTCTGGCAATCAAAAG............................................................... 22 0 1 1436.00 1436 54 161 56 137 114 12 13 10 37 10 104 6 100 26 4 32 6 42 2 14 3 37 0 6 3 62 3 5 32 0 4 4 24 4 39 4 6 4 9 25 18 23 3 3 1 2 0 6 3 3 0 0 5 0 2 0 2 5 13 1 12 2 3 0 1 0 7 1 0 4 2 1 2 3 0 1 0 0 1 1 1 1 1 0 11 0 0 1 0 0 0 12 1 0 0 0 0 0 1 0 11 4 0 5 0 0 3 2 1 1 0 1 0 0 2 3 1 3 2 0 0 0 0 1 0 3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2 1 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTCGTTTTCTGGCAATCAAA................................................................. 20 0 1 483.00 483 25 57 30 79 81 5 8 0 24 3 11 1 39 5 0 11 1 3 2 3 3 10 0 3 0 5 1 3 1 0 5 2 1 1 9 0 4 1 2 3 3 2 0 1 0 0 0 0 2 0 0 0 0 0 6 0 0 0 1 0 0 1 0 1 2 0 1 1 0 1 0 0 1 1 0 2 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTGATCACCAGTAACTGAG...................................................................................................... 20 0 1 388.00 388 28 67 77 50 25 16 12 12 7 5 2 8 11 5 5 4 3 1 4 2 4 1 1 2 2 1 1 0 1 0 0 1 1 1 1 0 1 1 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 2 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 2 0 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTCGTTTTCTGGCAATCAAAA................................................................ 21 0 1 359.00 359 9 51 12 55 53 2 6 0 6 1 19 1 26 8 3 4 2 8 1 2 2 18 0 1 2 4 1 1 3 0 2 0 2 2 7 0 2 0 1 6 1 1 0 3 0 0 0 1 0 0 0 1 0 0 0 0 0 1 2 0 1 2 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTGCTCACCAGTAACTGAGAT.................................................................................................... 22 1 1 225.00 225 159 31 15 0 0 3 7 0 8 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TCGTTTTCTGGCAATCAAAAGT.............................................................. 22 1 1 216.00 216 23 21 42 11 8 1 2 3 18 0 12 2 4 7 0 1 1 7 1 0 3 7 0 1 0 3 3 0 2 0 1 0 4 2 1 2 0 1 0 3 3 3 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTGATCACCAGTAACTGAGATT................................................................................................... 23 0 1 196.00 196 49 39 18 18 16 7 7 3 3 4 1 3 3 1 2 2 4 2 1 0 0 0 1 1 0 0 1 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTGATCACCAGTAACTGAGATA................................................................................................... 23 1 1 169.00 169 46 29 19 20 10 9 9 3 3 4 4 3 1 2 1 0 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTCGATCACCAGTAACTGAGAT.................................................................................................... 22 1 1 166.00 166 129 5 6 2 5 3 2 5 0 2 0 2 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTCGTTTTCTGGCAATCAAAAGT.............................................................. 23 1 1 147.00 147 13 8 50 2 8 0 1 0 6 2 7 6 2 0 1 0 2 4 0 0 0 5 1 1 1 0 2 0 0 0 1 3 2 2 0 2 1 1 0 1 0 0 0 3 0 3 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTCGTTTTCTGGCAATCAA.................................................................. 19 0 1 119.00 119 4 15 8 29 13 2 0 0 2 2 1 0 19 1 0 0 1 0 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 0 4 0 3 0 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................CTTGATCACCAGTAACTGAGAT.................................................................................................... 22 1 1 118.00 118 71 4 6 10 8 0 2 1 2 0 1 1 0 1 1 1 1 0 1 0 0 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTGATCACCAGTAACTGCGAT.................................................................................................... 22 1 1 104.00 104 8 23 21 2 4 2 16 2 0 0 0 2 1 0 3 4 1 1 0 1 1 0 0 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTGATCGCCAGTAACTGAGAT.................................................................................................... 22 1 1 93.00 93 40 31 2 3 2 0 1 1 1 0 1 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTCATCACCAGTAACTGAGAT.................................................................................................... 22 1 1 92.00 92 79 0 6 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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...................................................................TTTGATCACCAGTAACTGAGCC.................................................................................................... 22 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TGTACCATAGTTTAGTCTAAGTGGATTATCTTAGGCATCACTCGAGCAATAGTTCCCGGCTCAATGGAAACTAGTGGTCATTGACTCTAACAAAGACTATGCCAAAGCAAAAGACCGTTAGTTTTCTTGAACCTGAGCTGAACTTAAGTTGATGAAGCTACCCCGTGAGTCCGATATTCCATCTCTTTA
************************************************..((((((((((...((((((..((((.(((.((((((((.......)))))))))))..))))..))))))..))))))).)))....**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR001347
ago2_untreated
 SRR001664
homozygous_dcr-2_untreated
 SRR001349
heterozygous_dcr-2_untreated
 GSM609225
ML-DmBG3-C2		 SRR001338
IR_non-beta-eliminated
 SRR001348
ago2_oxidized
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 SRR029633
total small RNAs from hen1 homozygous flies
 GSM609222
ML-DmBG1-C1		 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2		 GSM609248
ML-DmD9 cell		 SRR031692
Total small RNAs from Oregon R
 V079
Oxidation, female head
 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 V0632
wt ovary AGO1-IP, reseq
AGO1		 GSM467731
Dmel_loq_sRNAseq
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1		 GSM609219
GM2 cell		 V091
fGS/OSS total  		 GSM385748
OSS_s6		 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1		 SRR001339
WT_females_non-beta-eliminated
 V086
female body, aged
 GSM385744
OSS_s2		 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1		 SRR031703
Total small RNAs from r2d2 homozygous flies
 GSM609223
male, one day
 GSM385822
OSS_s8		 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 GSM628271
r2d2[1] ovary total RNA  
 V073
mbn2 		V031
GM2 cell		 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 GSM286611
6-10h #2 (11)
 SRR031699
Total small RNAs from dcr-2 homozygous flies
 SRR341116
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 GSM609226
CMEW1 Cl.8+ cell		 GSM609250
ML-DmD32 cell		 V074
S3		 GSM609251
aged female head
 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 V085
CME W2 wing disc		 GSM609227
CMEW1 Cl.8+ cell		 GSM385821
OSS_s7		 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 GSM286601
male head
 V012
Dcr2 male (Katsutomo, whole fly?)
 SRR010954
Aub trans-heterozygotes, oxidized
 V080
Starvation, female head
 GSM609224
female, one day
 GSM399110
KC-48 #2
 SRR001345
ago2_non-beta-eliminated
 GSM343833
S2R+ cell		 V136
Male aged body
 V092
dcr-2[G31R] male total RNA  
 V003
dsDcr-1 (katsutomo RNA)
 SRR065155
Piwi bound piRNAs from tj GAL4 > RNAi-fs(1)Yb ovaries
 GSM628272
ago2[414] ovary total RNA
 SRR029028
untreated (mock)
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 V078
Desiccation, female head
 GSM609232
r2d2[1] ovary total RNA  
 GSM609230
CS,ovary,AGO1IP
AGO1		 GSM322533
female head #1
 GSM360257
1st instar #2
 V006
r2d2 female: possibly heterozygous
 V034
ML-DmD16c3 cell		 V032
S1 cell		 V148
mbn2 		SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 GSM609237
ago2[414] ovary total RNA
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1		 GSM609234
CS  male total RNA  
 V142
Oxidation_female_body
 V128
S3 		SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 GSM609238
embryo 14-24hr
 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 V037
Felix sample +mirtrons
 SRR010953
Aub heterozygotes, oxidized
 V137
Male aged head
 GSM239051
S2 cells, beta-eliminated
AGO2		 GSM379055
Flam Mutant
 V126
CME L1
.......................................TCTCGTGCAATACTTCCCGGCT................................................................................................................................ 22 3 1 94.00 94 47 33 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCCATACTTCCCGGCT................................................................................................................................ 21 3 4 27.00 108 38 52 6 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGTGCAATAATTCCCGGCT................................................................................................................................ 22 3 1 9.00 9 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCCATACTTCCCGGCT................................................................................................................................ 22 3 1 9.00 9 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATACTTCACGGCT................................................................................................................................ 21 3 2 9.00 18 6 8 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTAGAGGTCCATGACTCTA.................................................................................................... 19 3 9 7.44 67 0 0 0 0 0 0 35 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATACTTCCCGGCT................................................................................................................................ 21 2 1 7.00 7 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATACTTCCCGGAT................................................................................................................................ 21 3 3 5.67 17 7 2 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATACTTCCAGGCT................................................................................................................................ 21 3 2 5.50 11 7 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATACTTCCAGGCT................................................................................................................................ 22 3 1 5.00 5 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATCCTTCCCGGCT................................................................................................................................ 21 3 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCCATAATTCCCGGCT................................................................................................................................ 21 3 3 5.00 15 5 3 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATACTTCCCGGAT................................................................................................................................ 22 3 1 4.00 4 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATAATTCACGGCT................................................................................................................................ 22 3 1 4.00 4 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATACTTCACGGCT................................................................................................................................ 22 3 1 4.00 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGTGCAATATTTCCCGGCT................................................................................................................................ 22 3 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................AATAGTTAGCGGCTCAATGGG......................................................................................................................... 21 3 1 4.00 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGTGCCATAGTTCCCGGCT................................................................................................................................ 22 3 1 4.00 4 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TCGTGCCATACTTCCCGGCT................................................................................................................................ 20 3 5 3.00 15 3 5 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGTGCAATAGTTCCCGGAT................................................................................................................................ 22 3 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCACTACTTCCCGGCT................................................................................................................................ 21 3 2 3.00 6 0 5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATACTTCCCGGCC................................................................................................................................ 21 3 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCCATAATTCCCGGCT................................................................................................................................ 22 3 1 3.00 3 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CAATAGTTTCCGGGTCAGTG........................................................................................................................... 20 3 6 2.33 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGAGCAATACTTCACGGAT................................................................................................................................ 21 3 2 2.00 4 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................ACTCGTGCAATACTTCCCGGCT................................................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATACTTCCCGGCA................................................................................................................................ 22 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCTTGCAATACTTCCCGGCT................................................................................................................................ 21 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCCATATTTCCCGGCT................................................................................................................................ 21 3 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCTATACTTCCCGGCT................................................................................................................................ 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATACTTCCCGTCT................................................................................................................................ 21 3 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATATTTCCCGGAT................................................................................................................................ 21 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGCGCAATACTTCCCGGCT................................................................................................................................ 22 3 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TCGTGCAATACTTCCCGGCT................................................................................................................................ 20 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATATTTCCCGGCT................................................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTTCAATACTTCCCGGCT................................................................................................................................ 21 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................AATAGTTAGCGGCTCAATTG.......................................................................................................................... 20 3 5 1.60 8 0 0 0 6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................AATTGTTAGCGGCTCAATGG.......................................................................................................................... 20 3 7 1.29 9 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGGGCAATAGTTCCCGGAT................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGAGCCATATTTCCAGGCT................................................................................................................................ 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................CGCAATATTTCGCGGCTCAAT............................................................................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................ACTCTTGCAATACTTCCCGGCT................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TCGTGCACTACTTCCCGGCT................................................................................................................................ 20 3 4 1.00 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATACTTCGCGGCT................................................................................................................................ 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTAGAGCAATACTTCCCGGCT................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTACCGTAGTTTGGTCTAAG........................................................................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATGCCAAAGCAAAAGACCGTTA..................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATCCTTCCCGGCT................................................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCAATAATTCCCGGCT................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TTCGAGCAATCCTTCCCGGCT................................................................................................................................ 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGGGCCATACTTCCCGGCT................................................................................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATACTTCGCGGCT................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................AATGGAAATGAGTGGCCATTG.......................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AAATAGTTAGCGGCTCAATGG.......................................................................................................................... 21 3 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TTAATTTGATGAAGCTACCCC......................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................GTCGTGGGCTCTAACAAAGACTAT......................................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CAATAGTTTCCGGGTCAAT............................................................................................................................ 19 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TGTCGAGCAATATTTCCCGGCT................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCAAGCAATACTTCCCGGCT................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TCGAGCAATATTACCCGGCT................................................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CTGAGCAGAATTTAAGTTGGT.................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCACTAATTCCCGGCT................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCGAGCAATATTTCCCGGAT................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGGGCCATAGTTCACGGCT................................................................................................................................ 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TATCTTAGGCATCACTCGAGCAATAGTTC...................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTAGAGCAATAATTCCCGGCT................................................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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............................................................TCAACGGAAAGTAGTGGT............................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAGCTTAGGCACCACCCGAG............................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.......................................ACTCGAGCAATAGTTCAAGGAT................................................................................................................................ 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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............................................................TCACTGGAAGCTAGTGGTCT............................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CGACGCTAACAAAGACTATGTC...................................................................................... 22 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................................................................................................................TGGAATTAAGTTAATGAAGCT.............................. 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TAGTTCCCGGGTCAGTGTAA........................................................................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCGTGCACTACTTCCCGGC................................................................................................................................. 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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...............ACCAAGTGGATTCTCTTAG........................................................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTCCCGGCTCAATCGAA........................................................................................................................ 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GTCTAGAACCTGAGCTCAACT............................................. 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATGTAAACTAGTGGTCAGA........................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TATGTAAACTAGTGGTCAG............................................................................................................ 19 3 20 0.10 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................AATAGTTTCCGGGTCAGTG........................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CTCCGTGTGTCCGATATTA.......... 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TTGACCGTGACCTGAACTTAA.......................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATGTAGTTAAGTTGATGAAG................................ 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTAGTGGTCATGGACTA...................................................................................................... 17 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CTAAAGTTGATGAAGGTA............................. 18 2 12 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GTTGATGAAGCTACCCGGTTA..................... 21 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................CTAATTGGACACTAGTGGT............................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................AGCAAAAGACGGTGAGTTTG................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CGTGCCATAGTTCCCGCCT................................................................................................................................ 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATGGAAAATAGTGCTTATTG.......................................................................................................... 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GTTTACTATAAGTGGATT.................................................................................................................................................................. 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCTAGAACCTGAGCTCAAC.............................................. 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTTCCAAAGTTTAGTTTAAGT....................................................................................................................................................................... 21 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCTAGAACCTGAGCTCAA............................................... 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........AGTATAGCCGAAGTGGATT.................................................................................................................................................................. 19 3 17 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TCGGTTAGTCTAAGGGGAT................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTTGTACGTGAGCGGAACT............................................. 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GGGCCATAGTTCCCGGAT................................................................................................................................ 18 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CGCTAGTTTGCTTGTACCT....................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATAGTTTAGGCCAAGAGGA.................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................AAAGACTAAGCCAAAGTAATA............................................................................. 21 3 19 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ATCCGAAGACCGTTAGTTT................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................ATGCATCACTTGAGCAAG........................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GTGCTATACTTCCCGGCT................................................................................................................................ 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GGGCTCCATGGAAAATAG................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................ATTGTTAGCGGCTCAATGG.......................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CGTGATTTTGCTTGAACCT....................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CCGTGTGTCCGATATTATA........ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TCCACGTGGATTCTCTTAG........................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................AACTTAAGATGGTGAAGCGAC............................ 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................GTCATTGAGTCTGACAAAA.............................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGTTAGTGCGATATTCCA........ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GTTGAGTCTAAGAGGGTTA................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ACTAAATGGATTCTCTTAG........................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AAACTAGTTGTCATTGCT........................................................................................................ 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TTAGTCTACGAGGAATATC............................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GAGCACTACTTCACGGCT................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AATTTTTTGAACCTGAGCTG................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GGTGAATGCGATATTCCA........ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTTACGATACTTTAGTCTAA......................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGAGCGGAACATAAGTTGG..................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCTAGAACCTGAGCTCAACA............................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dm3 chr2L:5641141-5641329 + dme-mir-960 ACATGGTATCAAATCAGATTCAC------------------------------------CTAATAGAA----T-------CCGTAGTGAG-------CTCGTTAT-------CAA---GGGCCGAGTTACCTTTGATCACCAGTAACTGAGATTGTTT--CT-------GATACGGTTTCGTTTTCTGGCAATC-AAAAGAACTTGGACTCG-----------------------ACTTGAA------TTCAACTACTT---------C--GA-TGGGGCACTCAGGCTATAAGGTAGAGAAAT
droSim2 2l:5445894-5446083 + dsi-mir-960 ACATGGTATCAAATCTGATTCCC------------------------------------CCAAACGAA----C-------CCGTAATGTG-------CTCGTTAT-------CAT---GGGCCGAGTTACCTTTGATCATCAGTAAGTGAGATTGTTT--CT-------GATACGATTTCGTTTTCTGGCAATC-AAAGGAACTCGACTCG------------------------ACTTGAA---TCT-ACAACTACCT---------C--GA-TGGGGCGCTCAGGCTATAAGGTAGAGAAAT
droSec2 scaffold_5:3718882-3719071 + dse_357 ACATGGTATCAAATCTGATTCCC------------------------------------CCAAAGGAA----C-------CCGTAATGTA-------CTCTTTAT-------CAA---GGCCCGAGTTACCTTTGATCACCAGTAAGTGAGATTGTTT--CT-------GATACGATTTCGTTTTCTGGCAATC-AAAGGAACTCGACTCG------------------------ACTTGAA---TCT-ACAACTACCT---------C--GA-TGGGGCATTCAGGCTATAAGGTAGAGAAAT
droYak3 2L:13551986-13552166 - dya_33 ACGTGGTATCAAATCTGATTCAA------------------------------------CCGAAGGAAGAAAAT-----------------------CTAAT--T-------CAT---GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTTC--CT-------TCTTTGGCTTCGTTTTCTGGCGATC-AAAAGAACTCGACTCG------------------------ACTCGAA------TCCAACCAACT---------T--CA-TGGGGCACACAAGCTATAAGGTAGAGAAAT
droEre2 scaffold_4929:5729615-5729790 + der_35 ACGTGGCATCAATCCT-ATTCAA------------------------------------CTGATGGAA----AC-----------------------CTGAT--T-------CAT---GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTGC--CA-------CATTCGGCTTCGTTTCCTGGCGATC-AAAAGAACTCGACTCG------------------------GCTCGAA------TCCCAGTACCT---------C--CT-TGGGGCACTCAAGCTATAAGGTAGAAAAAT
droEug1 scf7180000409063:317450-317644 + ACATGGCTTCAAATCTGATTCAA------------------------------------CCAAGGGGA----C-------TTACAGTGTG-------AT---AAACAACGATCTT---TGGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTTA--CC-------AGTCCGGCTTCGTTTTCTGGCGATC-AAACAAACTCGACTTCAAA---------------------ACCCAAA------CCCAACTTCCT---------C--GC-CGGGGCACACAAGCTCTAAGGTAGAGAAAA
droBia1 scf7180000302422:3830688-3830878 + ACATGGTGTCAAATCTGAATTAC------------------------------------CTGGAGT-G----------TGCAATAGTGGT-------TTCACAAAAAGCAATTCG---GGGTCGAGTTCTCTTTGATCACCGGTTACTGATGTTGTTT-TCC-------GACGCGGCTTCGTTTTCTGGCGATC-AAACAAACTCGACCCAAAG----------------------------------GCCAACCAACC---------C--G--TCGGGCACTCAAGCTATAAGGTAGAGAAAT
droTak1 scf7180000415871:385426-385616 + ACATGGCATTAAATCTGATTCAA------------------------------------CTAAAGGAA----C-------TTGTAGTGAG-------CCCACTATCAACGATTCA---CGGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTACTTT--TC-------GCTTTTTCTTCGTTTTCTGGCGATC-AAATAAACTCGACTTAAAA----------------------------------CCCAACCAACT---------C--GA-CGGGGCACCCAAGCTATAAGGTAGAGAAAC
droEle1 scf7180000490753:30334-30511 + ACATGGTATCAAATCTAATTCAA------------------------------------CAAATGAAA----CGCCAGTCTCATAGTGA---------T---------CATCCTT---GGGCAGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTTC--TC-------GCTTCGGCTTCGTTTTCTGGAGATC-AAATAAACTCGAA----------------------------------------CCCAATTACCT---------------CGGGGCACCCAAGCTATAAGGTAGAGAAAA
droRho1 scf7180000778253:33805-33980 - ACATGGTATCAAATCTAATTCAA------------------------------------CTGAAGACC------------------TGAG-------ATCGT---------CCTT-A-GAGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTTC--TC-------GCTCCGACTTCGTTTTCTGGCGATC-AAATAAACTCGGCTTTGAG----------------------------------TTCAACTACCT---------C--CA-CGGGGCACTCAAGCTATAAGGTAGAGAAAC
droFic1 scf7180000453932:197512-197694 - ACATGGCATCAAATCTGATTCATCCGCGGAAGCTGT---------------------------------------------------GAACCAACGAA-CGT-CT-------CTG---GGGTCGAGTTCTGTTTGATCACCGGTTACTGAGGTCCTTT--CC-------ACTCCGACTTCGTTTTCTGGCGATC-AAACAAACTCGGCTCGGAA----------------------------------GCCATCC--CC---------C--CA-CTGGGCAGTCAAGCTATAAGGTAGAGAAAC
droKik1 scf7180000302389:430903-431095 - ACATGGCAGCAAAGCCAAGTCGA------------------------------------CGGTGG-AA----AG----TGCAACACTGAA-------GG-------------CGT---CCGAGGAGTTGGCTTTGATCACCGGTAACTGAGGTCGTCACGCC-------CAATCGACTTCGTTTTCTGGCGATC-AAACAAACTCGTCTCGGAA----------------------CTCCAACATCCT-GGAACTCCCT---------G--CC-CAAGGCACTCAAGCTATAAGGTAGAGAAAT
droAna3 scaffold_12916:11084941-11085135 + dan_50 ACATGGCATCAAATCTGTGTCAACGGCAGCAGGACT--------------------------------------------CCACAAAG-------GACTACAGGAAAGCGACTTA---AGTCCGAGCACTATTTGATCACTGGTTACTGAGGTTGTTT--TG-------TCATAAGCTTCGTTTTCTGGCGATC-AAATACGCTCGACTTTGGG----------------------------------CCCAACCACCT---------G--GCCGAGGGCACTCAAGCTATAAGGTAGAGAAAA
droBip1 scf7180000396572:742690-742884 + ACATGGCATCAAATAAAAGTCATCGGCAGCTGGACT--------------------------------------------TCATCAAG-------TACTATTTTAGAGCTACATA---AGTTCGAGTATTATTTGATCACTGGTTACTGAGGTTGTGT--CT-------GCATCAGCTTCATTTTCTGGCTATC-AAATACACACGACTTTGGG----------------------------------CCCAACCACCT---------G--GTCGGGGGCACCCAAGCTATAAGGTAGAGAAAG
dp5 4_group4:3182292-3182483 - dps-mir-2563 ATATGGCAGCCACTAA-AGACAA------------------------------------CCAGAGGAG----AG-----------------------CTGTT--T--CG---CCGGACAGTCAGAGTTTGATTTGATCTCTAGTTACTGGGCTTTGAT--TCGAAA---TAAGTAGCTTATTATTCTAGTGATTGAAATGAACTCGACTCGAGT--GCCA------------------CAAA------TGCCACATGAT---------GCAAA-TGGAGCAGTCGTGTTTTAAGGTACAGACTT
droPer2 scaffold_10:2201223-2201414 - ATATGGCAGCCACTAA-AGACAA------------------------------------CCAGAGGAG----AG-----------------------CTGTT--T--CG---CCGGACAGTCAGAGTTTGAGTTGATCTCTAGTTACTGGGCTTTGAT--TCGAAA---TAAGTAGCTTATTATTCTAGTGATTGAAATGAACTCGACTCGAGT--GCCA------------------CAAA------TGCCACATGAT---------GCAAA-TGGAGCAGTCGTGTTTTAAGGTACAGACTT
droWil2 scf2_1100000004962:109981-110184 - AAATGATAAAGAAAAAA---CAAAAACA-------------------------------------GAA----A-------TTG---TGT------------------GAAACTTG---AGTTTGAGTTTACATTGATCACTGGTTACTAAGGTTCCAAGTCA-------GATTCAACTTCGTTATCTGGCGATC-AAATAAACCTGGCTTACAATAGCTATAATTGATGAAATGGATACAAA----TT-TTTATTATTT---------A--AT-AAGGACCCTGAACTTATAAGGTAGAGAAAA
droVir3 scaffold_12963:3615378-3615464 + dvi-mir-962 G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATTTTTCAGTGAAT-TAAACAACTCAATTTACAC-----------------------ACACA------CACACACATAA---------G--AA-AGGGCGCCTCAAATTATAAGGTAGAGAAAT
droMoj3 scaffold_6500:14018362-14018391 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAGCGCTCAAGTTATAAGGTAGAGATAT
droGri2 scaffold_15252:3147084-3147270 + ATTTGTCATAAGACTTCACATAA--CAAAATGTTGTTAGCAGCCACATCTCTGAATTGAATTGGAT-T----------C-----------------------------------------GTTTTACTTTCTTTTATTACTGA--AATG-AGTTGTTC--AG----TTCT------TTTAAATTTCAGTCTACA-AACTAAGAGCAG---------------------------------------------GTTACTTTCATAACACA--CTCAAGAGCTCTCAGATTATAAGGTAGAGATTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dm3
ACATGGTATCAAATCAGATTCAC------------------------------------CTAATAGAA----T-------CCGTAGTGAG-------CTCGTTAT-------CAA---GGGCCGAGTTACCTTTGATCACCAGTAACTGAGATTGTTT--CT-------GATACGGTTTCGTTTTCTGGCAATC-AAAAGAACTTGGACTCG-----------------------ACTTGAA------TTCAACTACTT---------C--GA-TGGGGCACTCAGGCTATAAGGTAGAGAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2
...................................................................................................................................TTTGATCACCAGTAACTGAGAT.......................................................................................................................................................22129599.002959900000000000300000000042017200100000000123581610121520714163916341819291500010000000000000000000401000000000001012201300011010000000190000000010010000130000000230211001035483517248202819270000010122517130500117160503000141923825257258812346220632644032010002433004000124201299162506238912851001684177100100005706001001190176000020001010001001200130707201283117317740100071270137269110535843771918296078610940023041010112100500013811512282937443940472
...................................................................................................................................TTTGATCACCAGTAACTGAGA........................................................................................................................................................2113974.00397400000000000200000000000094001000000000221210501032123300000000000000000000000000100000000000000100800200100000200000000000000000000000100000000000019264724430000000600311010012030000000060332188203000321065500000133000000020194021388284013210351001100000012000019001600000100000000000020097461442621101000510400271022175412842211217800013700000000000303881426710310
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAG........................................................................................................2211436.0014360000000000030000000000001000000011111001301007501133314500000000000000000000000020120000000011102250039000204000003023002300000000000000001000000100000169223200121000000000000001000211101005120000013761612300114054200000020000001001426122418371043213624202200000200000000500400000000000000000000063733031400000010000400004041356101200064000000000003110013160011
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAA..........................................................................................................201483.004830000000000010000000000103900000000000020000100010110100000000000000000000000001210000000000000030090000030010010200000000000000000000000000000000000201110102000000000000000000111000000000007945700008102560000000000000000350213101111530000000000000000030050000000000000000000003240103200000011000000000101830050001200000000000003000010000
...................................................................................................................................TTTGATCACCAGTAACTGAG.........................................................................................................................................................201388.00388000000000000000000000100110000000000000000011000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001030140000000000000000000000100000020001035016700002502800000010000000000250410121011000000000000100000000000000000000000000000270114100000000010051000101127712160003100000000000225021080000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAA.........................................................................................................211359.003590000000000000000000000002600000000000000100211010030000000000000000000000000000210000000000001062170003000000010100020000000020000000000000000000001100400100000000000000000002000000000000055251000053090000000000000000028012118193248000000000100000001002000000000000000000000160102100000001000030001200612020002000000000000201000010000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAAGT.......................................................................................................221216.00216000000000000000000000000400000000000000000000001011010000000000000000000000000110000000000000030010000000000000300000000000000000000000000000000000021100000000000000000000000000000000000011021000080230000000000000000007014371221370000000000000000000010000000000000000000001182303020000000000000000201242310001000000000000000000120000
...................................................................................................................................TTTGATCACCAGTAACTGAGATT......................................................................................................................................................231196.0019600000000000000000000000030000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012020000000000000000000000000000200001001803900001604900000000000000000010100010002000000000000000002001000000000000000000000130100000000001000020000000718370004000000000000004000030000
...................................................................................................................................TTTGATCACCAGTAACTGAGATA......................................................................................................................................................231169.0016900000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000002002900001004600000000000000000020000040101000000000000000000000000000000000000000000030002000000000000010000000919390001000000000000004000030000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAGT.......................................................................................................231147.0014700000000000000000000000020000000000000000002000003000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000003000000000000000000000000000000000001002180000801300000000000000000000020570004000000000000000000001000000000000000000000160200020000000000010012201150000002300000000000102000060000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AA...........................................................................................................191119.001190000000000000000000000001900000000000000000000001001000000000000000000000000000000000000000100020040000000000000100000000000000000000000000000000000000000000000000000000010001000001100000029315000013040000000000000000001000021100000000000000010000000000000000000000000000002010000000000000000000000008020001000000000000002000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGAC.......................................................................................................................................................22147.00470000000000000000000000001000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100406000030200000010000000000000100010000000000000000000000000000000000000000000000110100000000000000000000100610210000000000000000001000000000
..................................................................................................................................CTTTGATCACCAGTAACTGAGAT.......................................................................................................................................................23144.0044000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000060900003080000000000000000001000000000000000000000000010000000000000000000000000001000000000000000000000000010050001000000000000004000100000
...................................................................................................................................TTTGATCACCAGTAACTGA..........................................................................................................................................................19144.00440000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000130400009010000002000000000010120000000000000000000000000000000000000000000000000001100000000000020000000000010000002100000000000001000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATC......................................................................................................................................................23140.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000010000000000251000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATTGTT...................................................................................................................................................26140.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000060600003060000000000000000001000003000000000000000000000000000000000000000000000001000000000000000000000000016100010000000000000001000100000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAAGA.......................................................................................................22138.0038000000000000000000000000300000000000000000200000000000000000000000000000000000000000000000000010000000000000000200000000000000000000000000000000000000000000000000000000000010000000000000041600001010000000000000000010001014103000000000000000000000000000000000000000000000010000000000000000000010110100000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGAA.......................................................................................................................................................22137.0037000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000020020500004040000000000000000000000001000000000100000000000000000000000000000000000001000000000000001000000000016220000000000000000001000020000
..................................................................................................................................CTTTGATCACCAGTAACTGAGA........................................................................................................................................................22136.0036000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000040500000070000000000000000100001010000000000000000000000000100000000000000000000010000000000000000000000000015220000000000000000001000000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAAG........................................................................................................21136.0036000000000000000000000000300000000000000000000001000000000000000000000000000000000000000000000011000001000000000100100000000000000000000000000000000000000000000000000000000002100001000000000200001010000000000000000031000145000000000000000000000000000000000000000000000001000000000000000000000010001010000000000000000010000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATATC....................................................................................................................................................25130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTGATCACCAGTAACTGAGAT.......................................................................................................................................................21127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010050500004080000000000000000001000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CTTTGATCACCAGTAACTGAG.........................................................................................................................................................21126.0026000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000040400000010000000000000000002000000000000000000000000000000000000000000000000000000010200000000000000000000016000000000000000000000000000000
..................................................................................................................................................................................................................................................................T---------C--GA-TGGGGCACTCAGGCT...............19125.0025000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000200000000000000000000000000000000000000200002000000000000000000022000032000100000000000000000000000000000000000000000000000000000000000000000000003000011000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGAG.......................................................................................................................................................22124.0024000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000070000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000017320000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATTGTTT--................................................................................................................................................27122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302000010100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000012000000000000000000101000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATTG.....................................................................................................................................................24116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050500000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002000020000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGC........................................................................................................................................................21113.0013000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000025000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAGA.......................................................................................................23113.0013000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000010000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000021101100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAA........................................................................................................22113.0013000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001010000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTG...........................................................................................................................................................18111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200004010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAA..........................................................................................................1919.009000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040200002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAAGC.......................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000012001000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAT........................................................................................................2217.007000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000200000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATAA.....................................................................................................................................................2417.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGG........................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100002000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATTGT....................................................................................................................................................2517.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000010100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000
.....................................................................................................................................TGATCACCAGTAACTGAGATTGT....................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTGATCACCAGTAACTGAGA........................................................................................................................................................2016.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGT........................................................................................................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000002000000002000000000000000000100000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AT...........................................................................................................1915.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-A............................................................................................................1815.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100100000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAGC.......................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000001000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................CTT---------C--GA-TGGGGCACTCAGGCT...............2115.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................TTTCTGGCAATC-AAAAG........................................................................................................1714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAA.........................................................................................................2014.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................ATCACCAGTAACTGAGAT.......................................................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAC........................................................................................................2214.004000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATTT.....................................................................................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATTGTTT--C...............................................................................................................................................2814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................TT---------C--GA-TGGGGCACTCAGGCT...............2014.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAAGTT......................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAAGAA......................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TAT-------CAA---GGGCCGAGTTACC.............................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000
........................................................................................................................................TCACCAGTAACTGAGAT.......................................................................................................................................................1713.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGATG......................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAGTT......................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................ACCTTTGATCACCAGTAACTGA..........................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTGATCACCAGTAACTGAGATATC....................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GTTTTCTGGCAATC-AAAA.........................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAAGAT......................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTTGATCACCAGTAACTGAGCC.......................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droSim2
ACATGGTATCAAATCTGATTCCC------------------------------------CCAAACGAA----C-------CCGTAATGTG-------CTCGTTAT-------CAT---GGGCCGAGTTACCTTTGATCATCAGTAAGTGAGATTGTTT--CT-------GATACGATTTCGTTTTCTGGCAATC-AAAGGAACTCGACTCG------------------------ACTTGAA---TCT-ACAACTACCT---------C--GA-TGGGGCGCTCAGGCTATAAGGTAGAGAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGG........................................................................................................221814.00814139348524943031604564010
...................................................................................................................................TTTGATCATCAGTAAGTGAGAT.......................................................................................................................................................221518.00518429761581332500533037000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAG.........................................................................................................211454.00454029202243201100100164000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AA...........................................................................................................191145.001450000140111000002000
...................................................................................................................................TTTGATCATCAGTAAGTGAGA........................................................................................................................................................211139.00139478019012200010014000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-A............................................................................................................181135.001350000131400000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAA..........................................................................................................201117.001170300871310020020000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGA.......................................................................................................23119.0019000040011000004000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGT.......................................................................................................23119.0019000000300010015000
...................................................................................................................................TTTGATCATCAGTAAGTGAG.........................................................................................................................................................20117.0017010014100001000000
...................................................................................................................................TTTGATCATCAGTAAGTGAGAC.......................................................................................................................................................2219.00918000000000000000
...................................................................................................................................TTTGATCATCAGTAAGTGAGG........................................................................................................................................................2119.00909000000000000000
.................................................................................................................................................................................................................................................................................................ATAAGGTAGAGAAAT1518.00800000000008000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGTTT.....................................................................................................2517.00700000000000016000
...................................................................................................................................TTTGATCATCAGTAAGTGAGATT......................................................................................................................................................2317.00700003011000002000
...................................................................................................................................TTTGATCATCAGTAAGTGA..........................................................................................................................................................1916.00604002000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGTT......................................................................................................2416.00601000000000005000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGT........................................................................................................2215.00500000001000013000
...................................................................................................................................TTTGATCATCAGTAAGTGAGAA.......................................................................................................................................................2213.00300000000001002000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAGG........................................................................................................2113.00300030000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-.............................................................................................................1713.00300000000003000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-ATT..........................................................................................................2022.50500000000000005000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AATT.........................................................................................................2122.00400000000000004000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGA........................................................................................................2212.00200000000000002000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAA.........................................................................................................2112.00201000000000001000
...................................................................................................................................TTTGATCATCAGTAAGTG...........................................................................................................................................................1812.00200002000000000000
....................................................................................................................................................................................GTTTTCTGGCAATC-AAAGGAAC.....................................................................................................2212.00201000000000001000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGAA......................................................................................................2412.00200000001000001000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGTT.......................................................................................................2312.00200000000000002000
.................................................................................................................................................................................TTCGTTTTCTGGCAAT...............................................................................................................1611.00100000000001000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAGGAT......................................................................................................2311.00100000001000000000
........................................................................................................................................................................................TCTGGCAATC-AAAGGAACTCG..................................................................................................2111.00100000000000001000
...................................................................................................................................TTTGATCATCAGTAAGTGAGATA......................................................................................................................................................2311.00100000000000001000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGTTT......................................................................................................2411.00100000000000001000
...................................................................................................................................TTTGATCATCAGTAAGTGAGATAA.....................................................................................................................................................2411.00100000000000001000
...................................................................................................................................................................................................................................................................................GGGGCGCTCAGGCTATAAGGTA.......2211.00100001000000000000
........................................................................................................................................................................................TCTGGCAATC-AAAGGAACTCGACTCG------------------------A....................................................................2711.00100000000000001000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAT..........................................................................................................2011.00101000000000000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAGGAA......................................................................................................2311.00100000001000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAC..........................................................................................................2011.00100000010000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGC........................................................................................................2211.00100000000001000000
......................................................................................................TAT-------CAT---GGGCCGAGTTACC.............................................................................................................................................................................1911.00100001000000000000
.......................................................................................................................................ATCATCAGTAAGTGAGAT.......................................................................................................................................................1811.00100000000001000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGC.......................................................................................................2311.00100000000000001000
....................................................................................................................................................................................GTTTTCTGGCAATC-AAAGG........................................................................................................1911.00100000000001000000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAA..........................................................................................................1911.00100001000000000000
.....................................................................................................................................................................................TTTTCTGGCAATC-AAAGG........................................................................................................1811.00100000000001000000
....................................................................................................................................TTGATCATCAGTAAGTGAGAT.......................................................................................................................................................2111.00100001000000000000
......................................................................................................................................................................................TTTCTGGCAATC-AAAGG........................................................................................................1711.00100000000001000000
...................................................................................................................................TTTGATCATCAGTAAGA............................................................................................................................................................1711.00100000000000001000
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAGGA.......................................................................................................2211.00100000001000000000
....................................................................................................................................TTGATCATCAGTAAGTGAG.........................................................................................................................................................1911.00100001000000000000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-ATTT.........................................................................................................21130.54700000000000007000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AATTT........................................................................................................2290.22200000000000002000
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-ATTA.........................................................................................................2150.20100000000000001000
droSec2
ACATGGTATCAAATCTGATTCCC------------------------------------CCAAAGGAA----C-------CCGTAATGTA-------CTCTTTAT-------CAA---GGCCCGAGTTACCTTTGATCACCAGTAAGTGAGATTGTTT--CT-------GATACGATTTCGTTTTCTGGCAATC-AAAGGAACTCGACTCG------------------------ACTTGAA---TCT-ACAACTACCT---------C--GA-TGGGGCATTCAGGCTATAAGGTAGAGAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGG........................................................................................................221372.00372292466730
...................................................................................................................................TTTGATCACCAGTAAGTGAGAT.......................................................................................................................................................221122.00122190256
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAG.........................................................................................................21143.004333334
...................................................................................................................................TTTGATCACCAGTAAGTGAGA........................................................................................................................................................21122.002211920
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGT.......................................................................................................23120.002021800
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGT........................................................................................................2212.0020200
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAA.........................................................................................................2111.0010100
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGC........................................................................................................2211.0010100
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAT.........................................................................................................2111.0010100
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGA........................................................................................................2211.0010100
...................................................................................................................................TTTGATCACCAGTAAGTGAGATA......................................................................................................................................................2311.0010100
...................................................................................................................................TTTGATCACCAGTAAGTGAGATT......................................................................................................................................................2311.0010100
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAAGGA.......................................................................................................2311.0010100
..................................................................................................................................................................................TCGTTTTCTGGCAATC-AAAGG........................................................................................................2111.0011000
....................................................................................................................................TTGATCACCAGTAAGTGAGAT.......................................................................................................................................................2111.0010010
.................................................................................................................................................................................TTCGTTTTCTGGCAATC-AAA..........................................................................................................2011.0010100
.....................................................................................................TTAT-------CAA---GGCCCGAGTTACC.............................................................................................................................................................................2011.0010100
droYak3
ACGTGGTATCAAATCTGATTCAA------------------------------------CCGAAGGAAGAAAAT-----------------------CTAAT--T-------CAT---GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTTC--CT-------TCTTTGGCTTCGTTTTCTGGCGATC-AAAAGAACTCGACTCG------------------------ACTCGAA------TCCAACCAACT---------T--CA-TGGGGCACACAAGCTATAAGGTAGAGAAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae
...................................................................................................................................ATTGATCACCGGTTACTGAGG........................................................................................................................................................211645.006459183014610000
...................................................................................................................................ATTGATCACCGGTTACTGAGGT.......................................................................................................................................................221280.0028091212011244001
...................................................................................................................................ATTGATCACCGGTTACTGAG.........................................................................................................................................................20181.008129100366000
...................................................................................................................................ATTGATCACCGGTTACTGAGGTT......................................................................................................................................................23152.005231000147000
..................................................................................................................................CATTGATCACCGGTTACTGAGG........................................................................................................................................................22124.002400000024000
...................................................................................................................................ATTGATCACCGGTTACTGAGGTTT.....................................................................................................................................................24113.001320000011000
..................................................................................................................................CATTGATCACCGGTTACTGAGGT.......................................................................................................................................................23110.00101000009000
...................................................................................................................................ATTGATCACCGGTTACTGAGGTAT.....................................................................................................................................................2415.0051000004000
...................................................................................................................................ATTGATCACCGGTTACTGAGGC.......................................................................................................................................................2214.0040030001000
...................................................................................................................................ATTGATCACCGGTTACTGAGT........................................................................................................................................................2113.0030000003000
..................................................................................................................................CATTGATCACCGGTTACTGAG.........................................................................................................................................................2112.0020000002000
...................................................................................................................................ATTGATCACCGGTTACTGAGGTA......................................................................................................................................................2312.0020000002000
...................................................................................................................................ATTGATCACCGGTTACTGAC.........................................................................................................................................................2012.0021000001000
....................................................................................................................................TTGATCACCGGTTACTGAGG........................................................................................................................................................2012.0020000002000
...................................................................................................................................ATTGATCACCGGTTACTGA..........................................................................................................................................................1912.0020000101000
...................................................................................................................................ATTGATCACCGGTTACTGAGC........................................................................................................................................................2111.0010000001000
.................................................................................................................................................................................TTCGTTTTCTGGCGATC-AAAA.........................................................................................................2111.0010000001000
...................................................................................................................................ATTGATCACCGGTTACTGAGGTAC.....................................................................................................................................................2411.0010000001000
...................................................................................................................................ATTGATCACCGGTTACTGAGGA.......................................................................................................................................................2211.0011000000000
.....................................................................................................................................TGATCACCGGTTACTGAGG........................................................................................................................................................1911.0010000001000
..................................................................................................................................CATTGATCACCGGTTACTGAGGG.......................................................................................................................................................2311.0011000000000
...................................................................................................................................ATTGATCACCGGTTACTGAGGG.......................................................................................................................................................2211.0011000000000
...................................................................................................................................ATTGATCACCGGTTACT............................................................................................................................................................1711.0010000000001
......................................................................................................................................GATCACCGGTTACTGAGG........................................................................................................................................................1811.0010000001000
..................................................................................................................................CATTGATCACCGGTTACTGAGA........................................................................................................................................................2211.0011000000000
....................................................................................................................................TTGATCACCGGTTACTGAGGT.......................................................................................................................................................2111.0010000001000
droEre2
ACGTGGCATCAATCCT-ATTCAA------------------------------------CTGATGGAA----AC-----------------------CTGAT--T-------CAT---GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTGC--CA-------CATTCGGCTTCGTTTCCTGGCGATC-AAAAGAACTCGACTCG------------------------GCTCGAA------TCCCAGTACCT---------C--CT-TGGGGCACTCAAGCTATAAGGTAGAAAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head
...................................................................................................................................ATTGATCACCGGTTACTGAGG........................................................................................................................................................2111689.00168950601535143
...................................................................................................................................ATTGATCACCGGTTACTGAGGT.......................................................................................................................................................2211540.00154020411416117
...................................................................................................................................ATTGATCACCGGTTACTGAG.........................................................................................................................................................201149.0014900201398
...................................................................................................................................ATTGATCACCGGTTACTGAGGTT......................................................................................................................................................231142.00142100012813
...................................................................................................................................ATTGATCACCGGTTACTGAGGTTT.....................................................................................................................................................24120.00200000173
..................................................................................................................................CATTGATCACCGGTTACTGAGG........................................................................................................................................................2219.009000081
...................................................................................................................................ATTGATCACCGGTTACTGA..........................................................................................................................................................1919.009000081
...................................................................................................................................ATTGATCACCGGTTACTGAGGC.......................................................................................................................................................2219.009000081
..................................................................................................................................CATTGATCACCGGTTACTGAGGT.......................................................................................................................................................2316.006000051
.................................................................................................................................................................................TTCGTTTCCTGGCGATC-AAAAG........................................................................................................2215.005000050
...................................................................................................................................ATTGATCACCGGTTACTGAGT........................................................................................................................................................2114.004000040
...................................................................................................................................ATTGATCACCGGTTACTGAGGTA......................................................................................................................................................2314.004100021
.................................................................................................................................................................................TTCGTTTCCTGGCGATC-AAA..........................................................................................................2013.003100020
.................................................................................................................................................................................TTCGTTTCCTGGCGATC-AAAAGT.......................................................................................................2313.003000030
...................................................................................................................................ATTGATCACCGGTTACTGAGGG.......................................................................................................................................................2213.003000021
...................................................................................................................................ATTGATCACCGGTTACTGAGA........................................................................................................................................................2112.002000011
...................................................................................................................................ATTGATCACCGGTTACTGT..........................................................................................................................................................1912.002000020
....................................................................................................................................TTGATCACCGGTTACTGAGGTTGTG...................................................................................................................................................2511.001000010
....................................................................................................................................TTGATCACCGGTTACTGAGG........................................................................................................................................................2011.001100000
.................................................................................................................................................................................TTCGTTTCCTGGCGATC-AA...........................................................................................................1911.001000010
....................................................................................................................................TTGATCACCGGTTACTGAG.........................................................................................................................................................1911.001100000
...................................................................................................................................ATTGATCACCGGTTACTG...........................................................................................................................................................1811.001000001
.................................................................................................................................................................................TTCGTTTCCTGGCGATC-AAAA.........................................................................................................2111.001000001
...................................................................................................................................ATTGATCACCGGTTACTGAGGA.......................................................................................................................................................2211.001000010
....................................................................................................................................TTGATCACCGGTTACTGAGGT.......................................................................................................................................................2111.001000010
.........................................................................................................................................................TGTGC--CA-------CATTCGGCTTCGTTT........................................................................................................................2211.001000010
...................................................................................................................................ATTGATCACCGGTTACTGAGGTC......................................................................................................................................................2311.001000001
...................................................................................................................................ATTGATCACCGGTTACTGAGC........................................................................................................................................................2111.001000010
droEug1
ACATGGCTTCAAATCTGATTCAA------------------------------------CCAAGGGGA----C-------TTACAGTGTG-------AT---AAACAACGATCTT---TGGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTTA--CC-------AGTCCGGCTTCGTTTTCTGGCGATC-AAACAAACTCGACTTCAAA---------------------ACCCAAA------CCCAACTTCCT---------C--GC-CGGGGCACACAAGCTCTAAGGTAGAGAAAASizeHit CountTotal NormTotal
No Reads
droBia1
ACATGGTGTCAAATCTGAATTAC------------------------------------CTGGAGT-G----------TGCAATAGTGGT-------TTCACAAAAAGCAATTCG---GGGTCGAGTTCTCTTTGATCACCGGTTACTGATGTTGTTT-TCC-------GACGCGGCTTCGTTTTCTGGCGATC-AAACAAACTCGACCCAAAG----------------------------------GCCAACCAACC---------C--G--TCGGGCACTCAAGCTATAAGGTAGAGAAATSizeHit CountTotal NormTotal
No Reads
droTak1
ACATGGCATTAAATCTGATTCAA------------------------------------CTAAAGGAA----C-------TTGTAGTGAG-------CCCACTATCAACGATTCA---CGGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTACTTT--TC-------GCTTTTTCTTCGTTTTCTGGCGATC-AAATAAACTCGACTTAAAA----------------------------------CCCAACCAACT---------C--GA-CGGGGCACCCAAGCTATAAGGTAGAGAAACSizeHit CountTotal NormTotal
No Reads
droEle1
ACATGGTATCAAATCTAATTCAA------------------------------------CAAATGAAA----CGCCAGTCTCATAGTGA---------T---------CATCCTT---GGGCAGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTTC--TC-------GCTTCGGCTTCGTTTTCTGGAGATC-AAATAAACTCGAA----------------------------------------CCCAATTACCT---------------CGGGGCACCCAAGCTATAAGGTAGAGAAAASizeHit CountTotal NormTotal
No Reads
droRho1
ACATGGTATCAAATCTAATTCAA------------------------------------CTGAAGACC------------------TGAG-------ATCGT---------CCTT-A-GAGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTTC--TC-------GCTCCGACTTCGTTTTCTGGCGATC-AAATAAACTCGGCTTTGAG----------------------------------TTCAACTACCT---------C--CA-CGGGGCACTCAAGCTATAAGGTAGAGAAACSizeHit CountTotal NormTotal
No Reads
droFic1
ACATGGCATCAAATCTGATTCATCCGCGGAAGCTGT---------------------------------------------------GAACCAACGAA-CGT-CT-------CTG---GGGTCGAGTTCTGTTTGATCACCGGTTACTGAGGTCCTTT--CC-------ACTCCGACTTCGTTTTCTGGCGATC-AAACAAACTCGGCTCGGAA----------------------------------GCCATCC--CC---------C--CA-CTGGGCAGTCAAGCTATAAGGTAGAGAAACSizeHit CountTotal NormTotal
No Reads
droKik1
ACATGGCAGCAAAGCCAAGTCGA------------------------------------CGGTGG-AA----AG----TGCAACACTGAA-------GG-------------CGT---CCGAGGAGTTGGCTTTGATCACCGGTAACTGAGGTCGTCACGCC-------CAATCGACTTCGTTTTCTGGCGATC-AAACAAACTCGTCTCGGAA----------------------CTCCAACATCCT-GGAACTCCCT---------G--CC-CAAGGCACTCAAGCTATAAGGTAGAGAAATSizeHit CountTotal NormTotal
No Reads
droAna3
ACATGGCATCAAATCTGTGTCAACGGCAGCAGGACT--------------------------------------------CCACAAAG-------GACTACAGGAAAGCGACTTA---AGTCCGAGCACTATTTGATCACTGGTTACTGAGGTTGTTT--TG-------TCATAAGCTTCGTTTTCTGGCGATC-AAATACGCTCGACTTTGGG----------------------------------CCCAACCACCT---------G--GCCGAGGGCACTCAAGCTATAAGGTAGAGAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................TTTGATCACTGGTTACTGAGG........................................................................................................................................................211228.0022816001318613
...................................................................................................................................TTTGATCACTGGTTACTGAGGT.......................................................................................................................................................221104.0010451011789
...................................................................................................................................TTTGATCACTGGTTACTGAG.........................................................................................................................................................20118.00181001160
...................................................................................................................................TTTGATCACTGGTTACTGAGGTT......................................................................................................................................................23114.00140000140
...................................................................................................................................TTTGATCACTGGTTACTGAGGTTT.....................................................................................................................................................2418.008000080
..................................................................................................................................ATTTGATCACTGGTTACTGAGG........................................................................................................................................................2218.008000152
..................................................................................................................................ATTTGATCACTGGTTACTGAG.........................................................................................................................................................2113.003000120
...................................................................................................................................TTTGATCACTGGTTACTGAGA........................................................................................................................................................2112.002000020
...................................................................................................................................TTTGATCACTGGTTACTGAGGTTA.....................................................................................................................................................2411.001000010
...................................................................................................................................TTTGATCACTGGTTACTGAGC........................................................................................................................................................2111.001000010
....................................................................................................................................TTGATCACTGGTTACTGAGG........................................................................................................................................................2011.001100000
...................................................................................................................................TTTGATCACTGGTTACTGA..........................................................................................................................................................1911.001000010
...................................................................................................................................TTTGATCACTGGTTACTGAGT........................................................................................................................................................2111.001000010
.....................................................................................................................................TGATCACTGGTTACTGAGGTT......................................................................................................................................................2111.001000010
...................................................................................................................................TTTGATCACTGGTTACTGAGGA.......................................................................................................................................................2211.001000010
....................................................................................................................................TTGATCACTGGTTACTGAG.........................................................................................................................................................1911.001100000
..................................................................................................................................................................................TCGTTTTCTGGCGATC-AAATA........................................................................................................2111.001000010
...................................................................................................................................TTTGATCACTGGTTACTGAGGC.......................................................................................................................................................2211.001000001
...................................................................................................................................TTTGATCACTGGTTACTGAGGTC......................................................................................................................................................2311.001000100
.................................................................................................................................................................................TTCGTTTTCTGGCGATC-AAATT........................................................................................................2211.001000010
droBip1
ACATGGCATCAAATAAAAGTCATCGGCAGCTGGACT--------------------------------------------TCATCAAG-------TACTATTTTAGAGCTACATA---AGTTCGAGTATTATTTGATCACTGGTTACTGAGGTTGTGT--CT-------GCATCAGCTTCATTTTCTGGCTATC-AAATACACACGACTTTGGG----------------------------------CCCAACCACCT---------G--GTCGGGGGCACCCAAGCTATAAGGTAGAGAAAGSizeHit CountTotal NormTotal
No Reads
dp5
ATATGGCAGCCACTAA-AGACAA------------------------------------CCAGAGGAG----AG-----------------------CTGTT--T--CG---CCGGACAGTCAGAGTTTGATTTGATCTCTAGTTACTGGGCTTTGAT--TCGAAA---TAAGTAGCTTATTATTCTAGTGATTGAAATGAACTCGACTCGAGT--GCCA------------------CAAA------TGCCACATGAT---------GCAAA-TGGAGCAGTCGTGTTTTAAGGTACAGACTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................TTTGATCTCTAGTTACTGGGC........................................................................................................................................................211743.007435701011007190
..................................................................................................................................................................................TATTATTCTAGTGATTGAAATGA.......................................................................................................231616.00616000000306130
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAATGA.......................................................................................................241574.00574000000015721
...................................................................................................................................TTTGATCTCTAGTTACTGGGCT.......................................................................................................................................................221451.0045147300017803220
..................................................................................................................................................................................TATTATTCTAGTGATTGAAAT.........................................................................................................211236.00236110000102330
..................................................................................................................................ATTTGATCTCTAGTTACTGGGC........................................................................................................................................................221215.00215100000402100
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAAT.........................................................................................................221192.00192010000001910
..................................................................................................................................................................................TATTATTCTAGTGATTGAAATG........................................................................................................221172.00172100000001710
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAATG........................................................................................................231158.00158000000001580
.................................................................................................................................................................................TTATTATTCTAGTGATTGAA...........................................................................................................201154.00154010100201500
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAA..........................................................................................................211129.00129100000001280
..................................................................................................................................................................................TATTATTCTAGTGATTGAAA..........................................................................................................201112.00112000000301090
..................................................................................................................................ATTTGATCTCTAGTTACTGGGCT.......................................................................................................................................................23191.009181000090730
...................................................................................................................................TTTGATCTCTAGTTACTGGG.........................................................................................................................................................20191.009121000140830
...................................................................................................................................TTTGATCTCTAGTTACTGGGCTT......................................................................................................................................................23188.008852000040770
..................................................................................................................................ATTTGATCTCTAGTTACTGG..........................................................................................................................................................20172.007201000020690
..................................................................................................................................................................................TATTATTCTAGTGATTGAA...........................................................................................................19152.005211000000500
...................................................................................................................................TTTGATCTCTAGTTACTGGGCTTT.....................................................................................................................................................24147.004710000010450
...................................................................................................................................TTTGATCTCTAGTTACTGG..........................................................................................................................................................19137.003710000020340
..................................................................................................................................ATTTGATCTCTAGTTACTGGG.........................................................................................................................................................21135.003500000010340
..................................................................................................................................ATTTGATCTCTAGTTACTGGGCTT......................................................................................................................................................24134.003400000000340
...................................................................................................................................TTTGATCTCTAGTTACTGGGT........................................................................................................................................................21130.003010000010280
................................................................................................................................................................................CTTATTATTCTAGTGATTGAAAT.........................................................................................................23129.002901000000280
...................................................................................................................................TTTGATCTCTAGTTACTGGGCTTTT....................................................................................................................................................25127.002700000010260
.................................................................................................................................................................................TTATTATTCTAGTGATTGA............................................................................................................19121.002101000000200
...................................................................................................................................................................................ATTATTCTAGTGATTGAAATGA.......................................................................................................22118.001800000000180
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAATT........................................................................................................23115.001500000000150
.................................................................................................................................GATTTGATCTCTAGTTACTGGGC........................................................................................................................................................23115.001500000000150
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAATGT.......................................................................................................24115.001500000000150
...................................................................................................................................................................................ATTATTCTAGTGATTGAAATG........................................................................................................21114.001400000000140
..................................................................................................................................................................................TATTATTCTAGTGATTGAAATT........................................................................................................22111.001100000000110
....................................................................................................................................................................................TTATTCTAGTGATTGAAATGA.......................................................................................................21110.001000000000100
................................................................................................................................................................................CTTATTATTCTAGTGATTGAAATGA.......................................................................................................2518.0080000000080
..................................................................................................................................................................................TATTATTCTAGTGATTGAAATGT.......................................................................................................2318.0080000001070
..................................................................................................................................ATTTGATCTCTAGTTACTGGGT........................................................................................................................................................2217.0070000001060
.................................................................................................................................GATTTGATCTCTAGTTACTGGGCT.......................................................................................................................................................2417.0070000000070
..................................................................................................................................ATTTGATCTCTAGTTACTGGGCTTT.....................................................................................................................................................2516.0060000000060
.....................................................................................................................................................................................TATTCTAGTGATTGAAATGA.......................................................................................................2015.0050000000050
..................................................................................................................................ATTTGATCTCTAGTTACTGGGCTTTT....................................................................................................................................................2615.0050000000050
..................................................................................................................................ATTTGATCTCTAGTTACTG...........................................................................................................................................................1915.0050000000050
..................................................................................................................................................................................TATTATTCTAGTGATTGA............................................................................................................1815.0050000000050
..................................................................................................................................................................................TATTATTCTAGTGATTGAAAC.........................................................................................................2114.0040000000040
................................................................................................................................................................................CTTATTATTCTAGTGATTGAAA..........................................................................................................2214.0040000000040
....................................................................................................................................TTGATCTCTAGTTACTGGGCT.......................................................................................................................................................2113.0031000000020
....................................................................................................................................TTGATCTCTAGTTACTGGGCTT......................................................................................................................................................2213.0030000001020
...................................................................................................................................TTTGATCTCTAGTTACTGGGCTTG.....................................................................................................................................................2413.0030000000030
....................................................................................................................................................................................TTATTCTAGTGATTGAAAT.........................................................................................................1913.0030000000030
..................................................................................................................................................................................TATTATTCTAGTGATTGAAATA........................................................................................................2213.0030000000030
................................................................................................................................................................................CTTATTATTCTAGTGATTGAA...........................................................................................................2113.0030000000030
...................................................................................................................................TTTGATCTCTAGTTACTGGGCTTTTT...................................................................................................................................................2613.0030000000030
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAATGAA......................................................................................................2513.0030000000030
...................................................................................................................................TTTGATCTCTAGTTACTGGGA........................................................................................................................................................2112.0020000000020
.................................................................................................................................GATTTGATCTCTAGTTACTGG..........................................................................................................................................................2112.0020000000020
...................................................................................................................................TTTGATCTCTAGTTACTGGGCG.......................................................................................................................................................2212.0022000000000
.................................................................................................................................................................................TTATTATTCTAGTGATTG.............................................................................................................1812.0020000000020
..................................................................................................................................................................................TATTATTCTAGTGATTGAAATGAA......................................................................................................2412.0020000000020
.........................................................................................................................................................TTGAT--TCGAAA---TAAGTAG................................................................................................................................1812.0020000000020
...................................................................................................................................TTTGATCTCTAGTTACTGGGCC.......................................................................................................................................................2212.0022000000000
................................................................................................................................................................................CTTATTATTCTAGTGATTGAAATG........................................................................................................2412.0020000000020
...................................................................................................................................TTTGATCTCTAGTTACTGGGCTAAA....................................................................................................................................................2511.0010000000010
....................................................................................................................................TTGATCTCTAGTTACTGGG.........................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................TATTATTCTAGTGATTGAAAAA........................................................................................................2211.0010000000010
..................................................................................................................................ATTTGATCTCTAGTTACTGGTT........................................................................................................................................................2211.0010000000010
..................................................................................................................................ATTTGATCTCTAGTTACTGGGA........................................................................................................................................................2211.0010000000010
........................................................................................................................................................TTTGAT--TCGAAA---TAAGTAGC...............................................................................................................................2011.0010000000010
...................................................................................................................................................................................ATTATTCTAGTGATTGAAA..........................................................................................................1911.0010000000010
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAACT........................................................................................................2311.0010000000010
...................................................................................................................................TTTGATCTCTAGTTACTGGGCTGG.....................................................................................................................................................2411.0010000000010
.....................................................................................................................................................................................................................................................................................AGCAGTCGTGTTTTAAGGTAC......2111.0011000000000
........................................................................................................................................................TTTGAT--TCGAAA---TAAGTAGCT..............................................................................................................................2111.0011000000000
...................................................................................................................................................................................ATTATTCTAGTGATTGAA...........................................................................................................1811.0010000000010
....................................................................................................................................TTGATCTCTAGTTACTGGGCTTTGA...................................................................................................................................................2511.0010000000010
....................................................................................................................................................................................TTATTCTAGTGATTGAAATG........................................................................................................2011.0010000000010
.......................................................................................................................................................................................TTCTAGTGATTGAAATG........................................................................................................1711.0010000000010
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAATTT.......................................................................................................2411.0010000000010
...................................................................................................................................TTTGATCTCTAGTTACTGGT.........................................................................................................................................................2011.0010000000010
...................................................................................................................................TTTGATCTCTAGTTACTG...........................................................................................................................................................1811.0010000000010
.........................................................................................................................................................TTGAT--TCGAAA---TAAGTAGC...............................................................................................................................1911.0010000000010
.................................................................................................................................................................................TTATTATTCTAGTGATTGAAG..........................................................................................................2111.0010000000010
...................................................................................................................................................................................ATTATTCTAGTGATTGAAAT.........................................................................................................2011.0010000000010
droPer2
ATATGGCAGCCACTAA-AGACAA------------------------------------CCAGAGGAG----AG-----------------------CTGTT--T--CG---CCGGACAGTCAGAGTTTGAGTTGATCTCTAGTTACTGGGCTTTGAT--TCGAAA---TAAGTAGCTTATTATTCTAGTGATTGAAATGAACTCGACTCGAGT--GCCA------------------CAAA------TGCCACATGAT---------GCAAA-TGGAGCAGTCGTGTTTTAAGGTACAGACTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................GTTGATCTCTAGTTACTGGGCT.......................................................................................................................................................2214.004000202
...................................................................................................................................GTTGATCTCTAGTTACTGGGCTT......................................................................................................................................................2311.001000001
droWil2
AAATGATAAAGAAAAAA---CAAAAACA-------------------------------------GAA----A-------TTG---TGT------------------GAAACTTG---AGTTTGAGTTTACATTGATCACTGGTTACTAAGGTTCCAAGTCA-------GATTCAACTTCGTTATCTGGCGATC-AAATAAACCTGGCTTACAATAGCTATAATTGATGAAATGGATACAAA----TT-TTTATTATTT---------A--AT-AAGGACCCTGAACTTATAAGGTAGAGAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................TACATTGATCACTGGTTACTAAGGTTC.....................................................................................................................................................2770.14100010
........................................................................................................................................TCACTGGTTACTAAGGTTCCAAGT................................................................................................................................................2470.14101000
.........................ACA-------------------------------------GAA----A-------TTG---TGT------------------GAAACTTG---AGTT......................................................................................................................................................................................2580.13100010
........................................................................................................................TTTGAGTTTACATTGATCACTGGT................................................................................................................................................................2480.13100010
.................................................................................TG---TGT------------------GAAACTTG---AGTTTGAGTTTACA............................................................................................................................................................................2780.13100010
..........................................................................................................................TGAGTTTACATTGATCACTGGTT...............................................................................................................................................................2380.13101000
........................................................................A-------TTG---TGT------------------GAAACTTG---AGTTTGAGT.................................................................................................................................................................................2480.13100010
.......................................................................................................................GTTTGAGTTTACATTGATCACTGG.................................................................................................................................................................2480.13101000
droVir3
G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATTTTTCAGTGAAT-TAAACAACTCAATTTACAC-----------------------ACACA------CACACACATAA---------G--AA-AGGGCGCCTCAAATTATAAGGTAGAGAAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
.................................................................................................................................................................................................................................................................AA---------G--AA-AGGGCGCCTCAAATT...............2011.00100000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATAA---------G--AA-AGGGCGCCTCAAATC...............2211.00100000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAA---------G--AA-AGGGCGCCTCAAATT...............2111.00100000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................A---------G--AA-AGGGCGCCTCAAATT...............1911.00100000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATAA---------G--AA-AGGGCGCCTCA...................1811.00100000000000000000000000000000000010000000000000000000000000000
droMoj3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAGCGCTCAAGTTATAAGGTAGAGATATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATTTGTCATAAGACTTCACATAA--CAAAATGTTGTTAGCAGCCACATCTCTGAATTGAATTGGAT-T----------C-----------------------------------------GTTTTACTTTCTTTTATTACTGA--AATG-AGTTGTTC--AG----TTCT------TTTAAATTTCAGTCTACA-AACTAAGAGCAG---------------------------------------------GTTACTTTCATAACACA--CTCAAGAGCTCTCAGATTATAAGGTAGAGATTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 01/23/2015 at 11:52 PM