ID:

dme-mir-312

 Coordinate:

chr2R:16471561-16471626 -

 Confidence:

Known Ortholog

 Type:

intergenic

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.3 -25.5 -25.5

Sense Strand Reads

CTAACAATTAGCATTTTTAAATTATTAGAAATGTGAATTAAGTTTGAAGCGATTTGGTTCGTCACAAGGGCAATTCTGCATTTTTTAACTAGTATTGCACTTGAGACGGCCTGATTACTTTAAAACGAATCATTTTATGAGCAAAGTAATTAGTTTTGTTGTGTTT
***************************************...(((((((.((((.(((.((((.((((.(((((.(((...........))).))))).)))).))))))).)))).))))))).....************************************* 		Read size # Mismatch Hit Count Total Norm Total V0662
r2d2 ovary, AGO1-IP, reseq
AGO1
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1
 V096
loqsKO/f00791 ovary
 V0632
wt ovary AGO1-IP, reseq
AGO1
 GSM628272
ago2[414] ovary total RNA
 GSE24544
dcr-2[L811fsX] ovary total RNA
 GSE24545
CS ovary total RNA
 GSM609229
embryo 2-6hr
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 GSM609231
ago2[414], ovary, AGO1IP
AGO1
 GSM609237
ago2[414] ovary total RNA
 GSM628271
r2d2[1] ovary total RNA  
 GSM609236
dcr-2[L811fsX], ovary, AGO1IP
AGO1
 SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 GSM609230
CS,ovary,AGO1IP
AGO1
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 V140
Dessication_female_body
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 GSM609232
r2d2[1] ovary total RNA  
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 SRR014269
Embryo_0-2hrs_rep1_LK_0_2hr_Emb
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 SRR014270
Embryo_0-2hrs_rep1_NA_0_2hr_Emb
 SRR298536
strain: vret148-60/TM6genotype/variation: Vret Heterozygote
 SRR014281
Ovary_rep1_wK(fem)_x_w1118(male)_F1
 SRR014271
Embryo_0-2hrs_rep1_w1118_0_2hr_Emb
 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 V141
Heat_female_body
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 SRR014274
Ovary_rep1_LK(fem)_x_Har(male)_F1
 GSM379066
Zuc Mutant
 V131
ML-DmD16-c3 		GSM379063
Vasa Heterozygote
 V142
Oxidation_female_body
 GSM286613
0-1hr #1 (A)
 SRR014275
Ovary_rep1_LK_P
 GSM343287
Drosophila Toll 10b mutant embryos
 SRR014276
Ovary_rep1_NA(fem)_x_Har(male)_F1
 GSM379065
Zuc Heterozygote
 SRR014272
Embryo_0-2hrs_rep1_wK_0_2hr_Emb
 SRR060645
yw67c23(2)_testes_total
 SRR060644
A2_ovaries_total
 GSM286605
2-6h #1 (8)
 SRR065801
zuc_het(H-Y)_ovaries
 SRR014280
Ovary_rep1_w1118_P
 GSM379062
Squ Mutant
 V139
Cold_female_body
 GSM379060
SpnE Heterozygote
 GSM379050
Armi Heterozygote
 GSM379054
Flam Heterozygote
 GSM379064
Vasa Mutant
 SRR060643
A2_testes_total
 GSM379052
Aub Heterozygote
 GSM379056
Krimp Heterozygote
 SRR014279
Ovary_rep1_w1118(fem)_x_wK(male)_F1
 SRR060653
hs-Penelope_ ovaries_total
 SRR065800
zuc_H-Y_ovaries
 SRR060652
hs-Penelope_testes_total
 GSM286607
6-10h #1 (10)
 GSM379058
Piwi Heterozygote
 GSM379051
Armi Mutant
 SRR014273
Ovary_rep1_Har_P
 V128
S3 		SRR014282
Ovary_rep1_wK_P
 GSM379057
Krimp Mutant
 GSM286611
6-10h #2 (11)
 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 SRR060646
yw67c23(2)_ovaries_total
 SRR014277
Ovary_rep1_NA_P
 GSM280083
dcr-2-/- ovaries (18-29nt)
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 GSM379053
Aub Mutant
 GSM286604
0-1h #3 (7)
 SRR060650
A1_testes_total
 S6
0-1,2-6,6-10h embryo
 GSM399106
female body #2
 V091
fGS/OSS total  		 GSM379067
SpnE Mutant
 GSM286606
2-6h #2 (9)
 GSM280084
loqs-/- ovaries (18-29nt)
 V074
S3		 GSM280085
WT testes (18-24nt)
 SRR014268
Embryo_0-2hrs_rep1_HAR_0_2hr_Emb
 V034
ML-DmD16c3 cell		 GSM280082
WT ovaries (18-29nt)
 V006
r2d2 female: possibly heterozygous
 GSM609240
IR+ 2-18hr
 GSM609239
IR- 2-18hr
 GSM379061
Squ Heterozygote
 GSM379059
Piwi Mutant
 GSM609243
KC+48 #1
 GSM399105
disk #2
 V132
ML-DmD32 		GSM467730
Dmel_r2d2_sRNAseq
 SRR060647
A2_ovaries_FLAG-Ago2
AGO2
 GSM275691
imaginal disc
 GSM609238
embryo 14-24hr
 SRR010959
Ago3 IP in heterozygotes
AGO3
 GSM467729
Dmel_wt_sRNAseq
 GSM379055
Flam Mutant
 V092
dcr-2[G31R] male total RNA  
 GSM286603
female body
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 V086
female body, aged
 SRR060651
A2_ovaries_Ago3
AGO3
 V138
Male cold body
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 SRR010956
Piwi IP in Ago3 heterozygotes
 GSM399110
KC-48 #2
 GSM609234
CS  male total RNA  
 GSM180331
early embryo (2-6)
 V015
DreRFHV148h
 GSM467731
Dmel_loq_sRNAseq
 GSM609250
ML-DmD32 cell		 SRR010955
Aub IP in Ago3 heterozygotes
 GSM399107
male body #2
 GSM609224
female, one day
 SRR065804
Piwi-IP_zuc_H-Y_ovaries
 GSM609219
GM2 cell		 GSM180330
very early embryo (0-1)
 SRR010957
Aub IP in Ago3 trans-heterozygotes
 GSM609223
male, one day
 SRR010958
Piwi IP in Ago3 trans-heterozygotes
 GSM180332
mid embryo (6-10)
 V126
CME L1 		V031
GM2 cell		 V136
Male aged body
 SRR065802
Piwi-IP_zuc_mut_ovaries
 GSM322543
male head #1
 GSM364902
12-24hr embryo
 SRR341118
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 V144
OSC		 V133
Sg4 		GSM360262
0-2d pupae
 SRR065807
Piwi-IP_squ_het_ovaries
 SRR341115
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 SRR065806
Piwi-IP_squ_mut_ovaries
 GSM322533
female head #1
 SRR010954
Aub trans-heterozygotes, oxidized
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1
 V022
ML-DmD32 cell		 GSM180335
imaginal discs
 V012
Dcr2 male (Katsutomo, whole fly?)
 SRR065805
Piwi-IP_zuc_het(H-Y)_ovaries
 GSM360260
0-1d Pupae (w)
 SRR065803
Piwi-IP_zuc_het(mut)_ovaries
 SRR010953
Aub heterozygotes, oxidized
 SRR060649
A2_ovaries_FLAG-Piwi
 GSM180329
adult bodies (female bodies, male bodies)
 V147
1182-4H cell		 GSM322219
2-4day pupae #1
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 V023
Dcr2 female head
 GSM240749
female head
 V127
G2		 GSM609244
KC+48 #2
 GSM180333
late embryo (12-24)
 SRR029633
total small RNAs from hen1 homozygous flies
 SRR032092
mock oxidized
 GSM286602
male body
 GSM609242
s2+48 #2
 SRR031692
Total small RNAs from Oregon R
 V146
S1 cell		 V125
ML-DmD9		 GSM272651
S2-48,+48, KC-48, +48 mix
 GSM609218
Sg4		 SRR060648
A2_ovaries_FLAG-Aub
 V085
CME W2 wing disc		 V137
Male aged head
 SRR029608
total small RNAs from hen1 heterozygous flies
 V129
ML-DmBG1-c1		 SRR031696
Ago1-associated small RNAs from Oregon R
AGO1
 SRR010960
wt, oxidized
 SRR001349
heterozygous_dcr-2_untreated
 GSM609235
CMEL1		 GSM313163
dcr-2 heterozygous, untreated
 SRR001664
homozygous_dcr-2_untreated
 GSM609225
ML-DmBG3-C2		 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 V036
ML-DmD20c5 cell		 GSM280087
S2cell (AGO2IP)
AGO2
 SRR010951
Ago3 heterozygotes, oxidized
 SRR001347
ago2_untreated
 V032
S1 cell		 SRX247212
AGO1-IP from S2-R+, FLAG-HA-AGO2
AGO1
 V135
CME W2 (wing disc line)		 SRR010952
Ago3 trans-heterozygotes, oxidized
 V148
mbn2 		GSM322245
3rd instar #1
 SRR001339
WT_females_non-beta-eliminated
 V145
S2-DRSC		 GSM360256
1st instar #1
 SRR031698
2'-O-methylated small RNAs from dcr-2 heterozygous flies
 GSM361908
s2-48 Biological Replicate #2
 GSM322208
3rd instar #2
 SRR029030
dcr-2 knockdown
 SRR029032
r2d2 knockdown
 SRR065155
Piwi bound piRNAs from tj GAL4 > RNAi-fs(1)Yb ovaries
 GSM609222
ML-DmBG1-C1		 GSM360257
1st instar #2
 GSM180328
adult heads (female heads, male heads)
 GSM313161
dcr-2 heterozygous, oxidized
 SRR031699
Total small RNAs from dcr-2 homozygous flies
 SRR032094
ago2 knockdown
 GSM609241
s2+48 #1
 SRR029033
lacZ knockdown
 SRR065154
Piwi bound piRNAs from tj GAL4 > RNAi-zuc ovaries
 SRR065153
Piwi bound piRNAs from tj GAL4 > RNAi-armi ovaries
 SRR065152
Piwi bound piRNAs from tj GAL4 > RNAi-piwi ovaries
 V134
ML-DmD8 		GSM154618
23-29 nucleotide RNAs from Drosophila melanogaster ovaries
 GSM154621
piRNAs associated with Ago3 from Drosophila melanogaster ovaries
 GSM280086
WT ovaries (AGO2IP)
AGO2
 GSM322338
2-4day pupae#2
 SRR029029
dcr-1 knockdown
 V077
cold, female head
 GSM280088
S2cell (AGO1IP)
AGO1
 GSM272653
KC -48 #1
 GSM609248
ML-DmD9 cell		 GSM371638
S2-NP		 GSM313162
dcr-2 homozygous, untreated
 GSM385748
OSS_s6		 SRR001348
ago2_oxidized
 SRR031700
2'-O-methylated small RNAs from dcr-2 homozygous flies
 SRR031703
Total small RNAs from r2d2 homozygous flies
 SRR065151
Piwi bound piRNAs from tj GAL4 > RNAi-aub ovaries
 SRR097865
Drosophila S2-NP cells
 GSM609227
CMEW1 Cl.8+ cell		 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2
 GSM313160
dcr-2 homozygous, oxidized
 GSM385744
OSS_s2		 GSM272652
S2 -48 Biological Replicate #1
 SRR001338
IR_non-beta-eliminated
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 V008
S2-DRSC		 GSM609251
aged female head
 GSM609249
ML-DmD21 cell		 V130
ML-DmBG3-c2 		GSM154622
piRNAs associated with Aubergine from Drosophila melanogaster ovaries
 GSM286601
male head
 GSM609217
MLDmD20c5		 V014
DTT 8h
 GSM399101
kc167 cell		 V037
Felix sample +mirtrons
 V080
Starvation, female head
 GSM180334
larvae: 1st instar and 3rd instars
 GSM180336
pupae: 0-1 day, 0-2 day, 2-4 day
 GSM239052
S2 cells, non beta-eliminated
 GSM313165
ago2 homozygous, oxidized (technical replicate #2)
 SRR001344
dcr-2_beta-eliminated
 SRR001345
ago2_non-beta-eliminated
 SRR029028
untreated (mock)
 SRR341117
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 V003
dsDcr-1 (katsutomo RNA)
 GSM399100
Kc167 cell		 GSM343832
S2R+ cell		 V038
Felix sample S2 only
 V078
Desiccation, female head
 GSM313164
ago2 homozygous, oxidized (technical replicate #1)
 GSM385821
OSS_s7		 GSM385822
OSS_s8		 SRR001337
WT_females_beta-eliminated
 SRR001343
dcr-2_non-beta-eliminated
 SRR029031
loqs-ORF knockdown
 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 SRR032093
ago1 knockdown
 SRR097867
Drosophila S2-NP cells
 SRR341116
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 GSM609247
heat female head
 GSM609220
ML-DmD21 cell		 GSM609221
1182-4H cell		 V030
ML-DmD8 cell		 V073
mbn2 		V079
Oxidation, female head
............................................................................................TATTGCACTTGAGACGGCCTGA.................................................... 22 0 1 823088.00 823088 100412 63215 54570 42606 39027 30295 23131 24491 16405 28567 16723 18710 12553 17841 18789 18032 15483 14926 15562 13465 13029 9360 8076 9220 11 5006 8848 4929 5411 6451 4962 3422 5366 4250 5391 5975 3968 4302 2756 3903 3371 453 4558 4031 3286 1935 3834 3234 2356 3840 4063 1756 4045 3853 4113 3426 1820 3351 2614 3271 2012 2295 1183 2450 3061 2955 1944 2487 2706 2008 2143 4 1980 1731 2215 1248 1551 1245 924 1256 1419 223 1292 750 571 966 600 626 1025 1096 810 717 622 726 500 546 388 547 453 99 408 252 462 374 395 161 455 372 44 424 136 147 380 325 156 251 264 203 323 234 131 187 97 166 158 145 54 120 131 124 81 37 38 64 87 130 87 91 54 23 85 51 50 0 82 62 38 20 23 30 9 1 19 30 47 27 19 24 21 28 15 16 19 42 5 14 13 16 19 14 23 8 4 5 12 12 22 2 8 20 14 10 8 4 12 13 1 6 7 12 6 4 8 5 10 15 6 1 5 4 13 5 4 6 4 4 1 4 10 3 3 4 5 2 7 7 7 0 4 7 2 4 3 2 5 3 3 2 3 2 0 5 4 3 3 2 3 1 1 3 1 2 0 1 1 1 2 3 0 2 0 0 2 1 1 2 2 0 1 1 1 2 1 0 1 1 0 0 0 1 0 1 0 0 0 1 1 1 0
............................................................................................TATTGCACTTGAGACGGCCTG..................................................... 21 0 1 229465.00 229465 11793 10222 10831 15108 8071 16783 13952 13785 12747 3586 1666 3891 6758 6071 3209 1381 3321 1216 1001 1140 832 6387 862 3057 0 4187 1403 2620 1114 2073 2236 3234 2029 888 1249 831 1518 916 2633 917 1813 2270 1467 1174 1446 1287 1063 568 1062 1041 636 2463 669 863 652 834 850 861 933 1029 1351 465 585 215 440 489 1014 794 623 630 254 0 869 815 407 872 503 368 473 189 149 1191 236 159 692 316 605 628 257 178 199 319 310 119 244 105 168 241 30 52 108 251 23 24 109 215 44 100 284 50 242 217 28 112 152 57 65 8 59 15 37 97 95 79 39 11 86 11 15 50 54 47 69 36 19 11 33 18 32 42 5 35 18 4 4 13 11 25 27 11 10 0 2 4 6 3 5 14 3 12 8 5 4 0 6 5 2 9 5 4 2 0 14 3 2 6 1 1 2 2 0 2 9 0 4 2 1 1 3 3 6 0 4 3 0 0 1 0 2 1 0 6 0 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TGGTTCGTCACAAGGGCAATTCT......................................................................................... 23 0 1 72064.00 72064 3499 1833 2264 4046 1510 5862 7500 6612 1767 428 965 365 1696 1047 227 1620 213 1148 909 1434 1044 1168 709 290 0 506 1104 446 2080 668 541 278 911 477 556 186 1415 228 663 351 479 5 478 495 723 368 110 424 343 517 115 513 119 84 102 261 121 163 249 351 454 297 375 355 110 107 207 456 240 243 239 0 283 206 40 134 71 108 49 139 160 165 71 173 45 117 33 17 74 55 39 44 88 94 35 78 111 73 2 246 93 129 119 1 21 66 38 50 52 41 100 63 37 34 40 43 23 0 7 41 33 24 12 8 19 46 17 21 16 14 5 40 16 34 19 3 19 19 13 2 0 10 3 5 1 5 13 5 5 7 20 4 19 5 1 7 4 5 1 8 13 7 2 0 0 6 2 1 1 3 1 15 6 6 1 6 0 1 0 0 4 0 0 4 0 0 1 1 0 0 0 2 0 0 0 1 3 9 0 3 0 0 6 0 2 0 8 2 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 2 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 2 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1
............................................................................................TATTGCACTTGAGACGGCCTGAA................................................... 23 1 1 70896.00 70896 4646 4183 3829 2554 3321 1631 1511 1200 2006 1323 4338 1282 698 814 1252 2660 1258 3331 3089 2632 2943 762 2329 438 57 674 198 803 232 306 561 74 314 962 269 303 74 190 282 696 239 79 161 188 388 317 301 637 300 172 265 152 302 177 243 172 525 296 202 150 75 306 238 522 184 114 147 60 121 77 465 14 121 103 155 64 78 287 169 264 196 6 60 187 62 41 38 82 33 74 42 56 72 19 44 79 28 4 0 9 39 27 58 0 16 15 40 25 17 40 8 21 80 50 8 51 19 0 2 26 32 7 8 3 28 18 7 23 31 2 2 2 7 8 11 20 2 2 11 13 11 0 9 0 5 0 6 4 2 4 5 0 2 5 1 5 6 3 5 1 3 2 3 0 3 9 6 3 0 5 2 0 0 0 2 0 1 0 0 0 0 0 0 0 1 2 0 1 0 0 0 2 0 0 0 0 2 0 0 0 0 0 1 0 0 2 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TATTGCACTTGAGACGGCCTGAAA.................................................. 24 2 1 59402.00 59402 1588 3921 2949 3281 3552 1416 1990 1194 1018 444 3535 936 536 616 1140 1661 1400 1891 1432 2724 1366 918 3202 333 10 1058 33 1209 132 168 468 7 174 732 179 171 10 178 559 659 542 111 98 71 254 92 499 712 1002 101 229 289 361 245 214 101 268 388 402 139 93 583 61 352 131 84 273 4 70 73 222 2 154 196 163 49 90 178 79 192 166 0 51 244 100 2 1 68 2 56 20 39 33 7 29 53 16 0 0 3 15 22 25 0 14 1 47 29 40 27 2 4 35 36 1 30 15 0 1 30 9 0 3 1 24 7 0 7 6 0 0 0 5 12 15 4 1 0 0 8 7 0 12 0 0 0 1 2 3 2 2 0 1 3 1 2 3 4 1 0 0 4 4 0 0 0 3 0 0 3 0 3 0 1 4 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TATTGCACTTGAGACGGCCT...................................................... 20 0 1 30804.00 30804 1521 2147 2732 1211 1885 814 580 485 824 463 173 918 362 451 655 124 794 44 45 67 22 336 125 255 0 553 274 502 113 179 445 1027 88 254 116 96 150 83 126 165 262 2703 83 146 269 547 188 128 71 87 72 90 82 134 85 96 356 122 143 81 83 42 146 92 50 54 154 58 77 145 95 0 58 100 73 163 164 117 216 70 26 44 36 25 212 42 194 215 95 19 24 31 28 7 101 36 59 12 2 5 27 27 2 4 33 41 6 27 45 2 45 48 0 8 43 17 16 1 10 0 30 2 47 16 7 0 15 0 3 1 16 3 3 2 4 4 1 2 8 5 0 4 2 2 2 4 5 20 6 7 1 3 0 0 0 3 5 1 3 0 1 3 0 0 6 1 0 7 1 1 0 0 0 0 0 0 0 1 1 0 4 1 1 1 0 0 0 0 4 2 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TGGTTCGTCACAAGGGCAATTC.......................................................................................... 22 0 1 28162.00 28162 2153 1328 1647 1540 1048 1912 1811 1743 554 305 165 274 553 330 170 218 129 178 136 200 134 330 122 92 0 247 396 191 935 199 210 454 152 74 197 90 544 87 204 173 241 3 169 124 277 554 145 205 243 143 80 196 75 78 52 105 234 61 90 87 301 174 361 40 42 36 132 107 104 66 35 0 165 84 39 173 35 70 182 30 31 64 24 28 16 38 34 34 67 33 9 19 16 14 13 38 75 13 1 371 48 28 6 5 19 27 13 15 24 25 26 41 7 22 29 18 9 6 1 7 20 8 11 4 6 8 9 3 3 4 2 18 9 8 10 0 5 3 2 18 0 7 0 11 2 1 3 1 3 5 9 7 2 2 1 1 1 2 0 0 5 1 0 0 2 0 0 0 0 0 0 0 3 4 1 2 0 7 0 0 1 0 0 6 0 0 10 0 1 0 0 6 1 0 0 0 1 2 5 1 0 0 1 0 2 0 2 0 0 1 0 0 0 0 0 0 0 3 0 0 2 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................TATTGCACTTGAGACGGCCTGT.................................................... 22 1 1 25331.00 25331 1562 1669 2127 3469 1048 893 870 513 461 411 129 671 386 309 528 154 445 66 49 124 59 236 125 170 0 379 141 292 45 99 202 400 207 86 101 104 260 173 145 53 125 11 99 116 96 865 105 52 94 65 76 100 54 49 42 58 584 48 60 77 264 67 733 67 60 66 81 124 44 76 44 0 80 76 50 79 51 27 247 15 19 166 65 7 89 38 52 57 38 8 16 15 33 15 20 1 7 17 0 6 10 9 2 0 20 61 3 23 15 22 41 35 0 2 36 5 6 0 6 0 9 3 12 27 1 0 16 0 0 1 10 16 2 2 4 3 12 2 4 0 1 0 2 0 1 2 0 1 1 1 1 0 5 0 1 0 0 0 6 3 0 0 0 0 1 0 1 1 0 0 1 0 2 3 1 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 2 0 1 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................TATTGCACTTGAGACGGCCTGAATC................................................. 25 2 1 17880.00 17880 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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............................................................................................TATTGCACTTGAGACGGTCTGAAA.................................................. 24 3 1 79.00 79 3 2 2 1 13 0 2 1 12 0 4 3 0 1 6 0 4 0 0 2 1 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 0 0 1 1 6 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TATTGCACTTGAGGCGGCCTGAAA.................................................. 24 3 1 79.00 79 3 6 8 4 6 4 3 0 1 2 0 3 0 1 3 3 5 0 1 0 1 2 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 1 0 2 0 0 0 0 1 0 0 1 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TATTGCACTTGAGACGGCCTGACAA................................................. 25 2 1 79.00 79 1 13 9 2 10 1 2 0 5 0 1 0 4 0 3 0 0 1 1 1 1 1 1 1 0 0 0 3 0 0 1 0 0 0 0 0 0 4 0 1 1 0 0 0 2 0 0 0 1 0 1 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TATTGCGCTTGAGACGGCCTGAA................................................... 23 2 1 79.00 79 3 8 7 3 6 2 0 2 3 4 0 1 2 0 2 0 4 1 3 0 0 2 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GATTGTTAATCGTAAAAATTTAATAATCTTTACACTTAATTCAAACTTCGCTAAACCAAGCAGTGTTCCCGTTAAGACGTAAAAAATTGATCATAACGTGAACTCTGCCGGACTAATGAAATTTTGCTTAGTAAAATACTCGTTTCATTAATCAAAACAACACAAA
*************************************...(((((((.((((.(((.((((.((((.(((((.(((...........))).))))).)))).))))))).)))).))))))).....*************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 V0632
wt ovary AGO1-IP, reseq
AGO1		 V073
mbn2 		SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1		 GSM609232
r2d2[1] ovary total RNA  
 GSM628271
r2d2[1] ovary total RNA  
 SRR029633
total small RNAs from hen1 homozygous flies
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1		 GSM609222
ML-DmBG1-C1		 V145
S2-DRSC		 SRR031701
Total small RNAs from r2d2 heterozygous flies
 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2		 V086
female body, aged
 GSM379063
Vasa Heterozygote
 GSM467729
Dmel_wt_sRNAseq
 GSM385748
OSS_s6		 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 V006
r2d2 female: possibly heterozygous
 GSM609230
CS,ovary,AGO1IP
AGO1		 V0642
ago2 ovary, AGO1-IP, reseq
AGO1		 V080
Starvation, female head
 V008
S2-DRSC		 SRR010959
Ago3 IP in heterozygotes
AGO3		 SRR031703
Total small RNAs from r2d2 homozygous flies
 GSM609225
ML-DmBG3-C2		 SRR010953
Aub heterozygotes, oxidized
 V036
ML-DmD20c5 cell		 V091
fGS/OSS total  		 V092
dcr-2[G31R] male total RNA  
 V074
S3		 GSM609229
embryo 2-6hr
 SRR031692
Total small RNAs from Oregon R
 SRR010958
Piwi IP in Ago3 trans-heterozygotes
 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR001349
heterozygous_dcr-2_untreated
 V085
CME W2 wing disc		 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 GSM399110
KC-48 #2
 GSM609217
MLDmD20c5		 GSM609231
ago2[414], ovary, AGO1IP
AGO1		 V077
cold, female head
 GSM286605
2-6h #1 (8)
 GSM609218
Sg4		 GSE24545
CS ovary total RNA
 SRR001337
WT_females_beta-eliminated
 GSM272653
KC -48 #1
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 SRR097867
Drosophila S2-NP cells
 GSM371638
S2-NP		 V078
Desiccation, female head
...................................................TAAACCAAGCAGTGTTCCCGTTA............................................................................................ 23 0 1 3.00 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAACCAAGCAGTGTTCCCGTTAA........................................................................................... 23 0 1 3.00 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AACCAAGCAGTGTTCCCGTTAA........................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AACCAAGCAGTGTTCCCGTTA............................................................................................ 21 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................ACCAAGCAGTGTTCCCGTTAA........................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AACGTGAACTCTCCCGAACAA................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TAGTCAAATACTCGTATCATTA................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................ACCAAGCAGTGTTTCCGTTAAG.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................GGACGTAAAAAGTTGACCATAA...................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ACTCGTTTCATTACTCTATAC........ 21 3 3 1.00 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CACTTAATTCAGAACTCGCTA................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TAAGAATTTAATAATCTTTA...................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................AACTCTGACTGATTAATGAAAT............................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCCCGTTAAGACGTAAAAAATTGATCAT........................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ACTAATGCCATTTTACTTAGT.................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAACCAAGCAGTGTTCCCGTTA............................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCTGCCGCACTAAAGAGATTT.......................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AAGACGTAAAAAATTGATCATAACGTGAA................................................................ 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGTTTTCCCGGTTAGACGTA..................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CATAACGTGAACTCTGCCGGA...................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCATAACGTGAACTCTGCCGGA...................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGAAATTTTGCTTAGTAAAAT............................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACGTGAACTCTGCCGGACTA................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTGCTTAGTAAAATACTCGTT...................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AATCCAAGCAGTGTTCCCGTTAA........................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CGAAACGTGAACTCTGCAGGA...................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CATAACGTGCACTCTGCCGGA...................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TCAAACTGAGCTAAACCATG.......................................................................................................... 20 3 6 0.83 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CATAAGGTTAACTCGGCCGGA...................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GACTAATGAAATTTTGTTTG.................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AACGTGAACTCTGCAGGAG..................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CAAGCATTGCTCCGGTTAAG.......................................................................................... 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CAAACCGTGAACTCTGCCGAA...................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AAAAATGGAACATAGCGTGAA................................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAACCAAGCAGTATACCCGTC............................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ATACTCGTTTTATTAATC............. 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CATACCGAGAACTTTGCCGGA...................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................ATTGATGATAAGGTGAACTCA............................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ACTATGCCGGACTAAAGAACT............................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CAAAACATGAACTCTGCCAGA...................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CCAAAACGTGAACTCTGCAGG....................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AACCGGGCAGTCTTCCCGTTA............................................................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CACTTAATTCCAACATCTCT.................................................................................................................. 20 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AACGTGAACTCTGCCAGGC..................................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGTTCCCGTTGAGACGTGAAG.................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CCAGGCAGTGTTCGCGTG............................................................................................. 18 3 20 0.30 6 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 0 0 0 0 1 0 0 0 0
...............................................................................................ACGTGAACTCTACCGGACGAC.................................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CTCTGCTGGCCTTATGAAAT............................................ 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AACTACTCGTTTCAAGAATC............. 20 3 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CCTTACACATAAGTCAAACTT...................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CATTTATCAAGACAACACAA. 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CAAGCAGTGTTCCCCTGAAC.......................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CACTAATGACATTTTACTTAG................................... 21 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAAAATACTCCTTTCATTAA............... 20 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CATTACGCGAACTCTGCCGA....................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGACGATTGAAATTTTGTTTA.................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TAATTAAATTTTGCGTAGTA................................. 20 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ACTAATGCAATTTGACTTAGT.................................. 21 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AGTAATGAAATTTTGCATAATA................................. 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TAATGAAATTTTGCATAGTT................................. 20 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TTTGCTATTAATTCAAACTTC..................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GTAGTAAAAGACTCATTTCAT.................. 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AAACTACTCGTTTCAAGAATC............. 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................ACTTAATTATAACTACGCTAAA............................................................................................................... 22 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CGTTTCATCATTCAAAACAAA..... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AAAATACTCGCTTCGTTACTC............. 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TAATGAAAATTTGCTTAATA................................. 20 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................AGCAGTATTCCCGATAAGAA........................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTCGTTTGATTTATGAAAACA....... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AACGTGAACGCTGCAGGA...................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTCGCGATAAGAGGTAAAAAA................................................................................ 21 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGCTAAAACAATCAGTGTTC.................................................................................................. 20 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................ATTGATGATAAGGTGAATTC............................................................. 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CTTAATTCAAACTGCAATAAA............................................................................................................... 21 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TAGTATAATACTCGTAGCA................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
..........................................................................................GCATAACGTGGACTTTGCCG........................................................ 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTAAAAAATTGATCATCAAGT................................................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AATTTTGTTTAGTAGAATA............................ 19 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TTGATGATAACGCGAACTAT............................................................ 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TTTCACCAAGCAAAACAACAC... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACGTGACCTCTGGCGTACT.................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ACTAAGGCAATTTTACTTAG................................... 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GAAATTTTGCTCAGTAAAAGT............................ 21 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CGTGCAGTGTTCCCGTGAA........................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ACCTCAACGTGAACTCTGCC......................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.GTTGTGAATCGTAAAAAT................................................................................................................................................... 18 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................AATCTGCCGGAATAATGA............................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ACTCTTTGCAGTTAATTCAAA......................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AACGTGAACTCTGCAGAAG..................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AATGGATCATGACGTAAAC............................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................AGTAGTGAGATTTTGCTTAGT.................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................TGCCTAGTAAAATAGTAGT....................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..TTGTTGAGCGTAAAACTTTA................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GTGATCGTAAGGTGAACTC............................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GATCCAGTTAAGTCGTAAA................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dm3 chr2R:16471511-16471676 - dme-mir-312 CTAACAA----TTAGCATTTTTAAATTATTAGAAA--------------------------------TG-TGAATTA-AGTTTGAAGCGATTTGGTTCGTCACAAG-GGCAATTCTGCATTT-T---TTAACTAGTATTGCACTTGAGACGGCCTGATTACTTTAAAA-CGAATCATTTT-----------------------AT-------G-------AGCAAAGTAA---------------------------------------------------------------------------TTAGTTTTGTTGTGTTT
droSim2 2r:17040984-17041145 - dsi-mir-312 CTAACAA----TTTAAATTTTTAAATTATTATAAATAA-----------------------------TG-TGAATTA-AGTTTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATTT-T---TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCAT-----------------------T--------G-------AGCAAAGTAA---------------------------------------------------------------------------TTAGTTT------TTTT
droSec2 scaffold_1:14025720-14025881 - dse-mir-312 CTAACAA----TTTAAATTTTTAAATTATTATAAATAA-----------------------------TG-GGAATTA-AGTTTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATTT-T---TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCAT-----------------------T--------G-------AGCAAAGTAA---------------------------------------------------------------------------TTAGTTT------TTTT
droYak3 2R:12724644-12724799 + dya-mir-312 ATAACAA----TTACCATATTTATATTATTATAAATAAA-------------------------GT-TA-CAAATTG-CGTTTGAAGCGCTTCGGTTCGTCCCAGG-AGCAATTCTGCACTATT---AAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CGAATCATTTA-----------------------A-----------------ACAACG---------------------------------------CATTAA--------------------------------------------------
droEre2 scaffold_4845:10616662-10616820 - der-mir-312-2 TTAAAAA----TTACCATATTTATATAATTG---ATTA-----------------------------TG-TGAATTA-AGTTTGAAGCGCTTCGGTTCGTACCAGG-AGCAATTCTGCATTTTTTT-TAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CAAAACATTTT-----------------------AAATAAAAA---------------------------------------------------------------------------------------------CTAATAC------TGTT
droEug1 scf7180000409474:1490016-1490184 + CAGACGG----CTTA--------AGTGAA-----------------------------------AT-TTAA-AATAA-AATTTCTAGTATTTCGGTTCGCCTTTTG-TGCAATTTTAGAGTC------AATAGAAAATTGCACTTCAGACGGCCGGATGACTTGAAATACAAAACATCTT-----------------------AAA----AT-CTAGAA-AACTAAG---------------------------------------TGTTAATTTTT----TGTTAATA------------------------GTTGTAGTT
droBia1 scf7180000302291:2816197-2816388 + CTGCAG-----CGGA---G-----GTGA---------------------------------------TA-TAGG-C-ATATTTTTGGCGTTTCGGTCCGTCCCAGG-AGCAATCCTGTATTT-----CCGACTAGAATTGCACTTGAGACGGCCGGAGTGCTTGAAAA-CAAGG--------AAAGTGCATAGAAACTAACTTAAA----AC--TAGCAG--------------T------------------------CGACCAGCTTTATTTTGCAGGCCGAGGTGGGTGGCAATGCGA----------------TGCTT
droTak1 scf7180000415401:99891-100095 - CAGTGA-CAGT-------GTAAAAATTGT-----------------------------------GTGTG-TAAA-C-ATATTTCTGGTGTTCCGGTCCGTCTCAGG-CGCAATTCTGAATTT-----TCACCTAGTATTGCACTTGAGACGGCCGGAATACTTTAAATACGAAACATAAAAA------------------------TGAAAA--TAATAG--------------T----------------------GAAACTTTGCTGTAATTTACATGTCGCGGGCGGTGACAATGCGAGTTAT---GTTTATTACGTAT
droEle1 scf7180000491201:736161-736356 - CAGTGA-AAAC-------ATTTAAATTTT-----------------------------------ATCTG-TGTA-C-TAATTTCTGGTGTTTCGGTACGTCTATGG-GGCAATTCTGCGTTT-T---CTGGTTAGCATTGCACTTGAGACGGCCGCAACACTTTGGAATAAAAACATTTAAGACAGTTTAAGAAA------------------ATAT-----------------TT-----------------------AATTCGGCATTAATTTATATGTCGCTGGCGGTGACAATACGA-----------------GCAT
droRho1 scf7180000780104:82234-82448 - CAGTGC-AAAT-------ATTTAAATATA-----------------------------------ATCTG-CGAA-C-AAATTTCTGGTGTTTCGGCTCGTCTCAAA-AGCAATTCTTCGTTTTTC--TTGGCTAGCATTGCACTTGAGACGGCCGCAATACTTTGGATTTAAAACATTTAAGCAAGTTTATTGAA------------------AAAG-----------------TT-----------------------ATTTTTGCATTAATTTATATGTCGCTGGCGGTGACAATACAAGTTGTTGGTTTTTTTTCGTAT
droFic1 scf7180000454039:1776217-1776397 - CTAAAGT----TTGCAA-GTTTTAATTAA-----------------------------------ATCGGGAAAA-C-CAATTTCGAGTGTTTCGGT-CGTCTTGGGTGGCAATACTAAATTAACTTTATGGCTAGCATTGCACTTGAGACGGCCGAAATGCTTTAAATTTATAACATCTAAG------------------------CAAGAC-------------------------------------------------------CCAAAATTCTGAGCCGTGGACAGTGATAATGC-------------------GATT
droKik1 scf7180000302471:941770-941938 - AGTCTT-------------CTTGAAAGAAGATAAA--------------------------------CA-AAAGCTC-CGGCCGTAAAGGTCTGTGCTGTTTGAGG-TGCAAATCTGTGGTT-A---ATAGCCAGAATTGCACTTGAAACGGCCAGATCAAGGCGGCC-CAAAACATCGCAA------------------------CAAAAA-------------------------------------------------------TTTAGACAATTGTTCGGGTAC-----------------TTGG----AATTTGCCT
droAna3 scaffold_13266:4132627-4132852 + dan-mir-312 CAATTTA----ATAAAAAATAAATAATAGTG-----T--TTGTGCTTTTTAAAAAAAACATCTA--------------------CAATTTTCCGGTGCGTCTCTAG-TGCAACTCTTGGTTTTT---TATACAAGTATTGCACTTGAGACGGCCGAAATATAGTGGAT-CTAAGCGGCTA-----------------------T--------A-------ACCGAA----AAGT-TTTCAGGAGCTAAAAAGTGTTTAGAACTTCGATTTTATTTGTAGGTCGCGGAAGGTTGCAATGCGT-----------------ATTT
droBip1 scf7180000396427:2575345-2575569 + CAATTAA----AAAAAAAATAATAATTGCA------A--GTGTGTGTGTTTGGATTTATGTCTA--------------------CAATTTTCGGGGTCATCTCCAG-TGCAAATCTTGGTTTTT---CCAACAAGAATTGCACTCGAGACGGCCAGAATATTGTGGAT-CTATGCAGCTA-----------------------C--------A-------AGCCGA----AAGT-GTTTAGAAGTTAGCAAGTGATTATGATTTCGATTTTATTTGTAGGTTGTGGAAGGTTGCAAAGCGT-----------------ATTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dm3
CTAACAA----TTAGCATTTTTAAATTATTAGAAA--------------------------------TG-TGAATTA-AGTTTGAAGCGATTTGGTTCGTCACAAG-GGCAATTCTGCATTT-T---TTAACTAGTATTGCACTTGAGACGGCCTGATTACTTTAAAA-CGAATCATTTT-----------------------AT-------G-------AGCAAAGTAA---------------------------------------------------------------------------TTAGTTTTGTTGTGTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2
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.......................................................................................................................................TATTGCACTTGAGACGGCCTGAT....................................................................................................................................................................2319476.00947600000252310400000000011241023000000000032721131741827352773511322621393312000647724000000000000000001000047135130450010000360111100740200138051619001700000000000000000004125015881095819264638431212434329260000000000010000004000000000000024747124110007051071000000242200200000049203195715292188238202155152231400160006906000001003010020000000000016000012937128677422071126710160017000000119512126713397226121380042191168110230050210034101556332530011
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............................................................................................TGGTTCGTCACAAG-GGCAAT.................................................................................................................................................................................................................2011405.00140500000002000300000000001246000000000049100220022022000251100000000000000000000000000006010128000030013021500210400100001022012000000000000010041000000016312152363610055000000000070000000100000000000005038636002504290000034000040000923197639514056600100000210000000000101000000000000000000001311901651900100000011210010049831190016252200030060000317453100000
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.......................................................................................................................................TATTGCACTTGAGACGGCCTTC.....................................................................................................................................................................22182.008200000010000000000000011000000000000001000010300000136010000000000000000000000000000000000000000000000000000000000000000000000000001000000000001002010100110000000000000000000000000000000000010000000000000000000000000000100000000000010000001000000000000000000000000000000022100060000000002000007216300000000000000000000000100000000
droSim2
CTAACAA----TTTAAATTTTTAAATTATTATAAATAA-----------------------------TG-TGAATTA-AGTTTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATTT-T---TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCAT-----------------------T--------G-------AGCAAAGTAA---------------------------------------------------------------------------TTAGTTT------TTTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................TATTGCACTTGAGACGGCCGA......................................................................................................................................................................211124803.0012480301166577401262208182302132942314797598145310924750225
.......................................................................................................................................TATTGCACTTGAGACGGCCGAA.....................................................................................................................................................................22189294.00892942342763301871251852478715971140486128539824979111
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAA....................................................................................................................................................................23184398.008439808303625009108857630216275806241567907267000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................24136006.0036006005425600344133751575910778192715722039000
............................................................................................TGGTTCGTCACAAG-GGCAATT................................................................................................................................................................................................................21111357.0011357013601912445399188918711111396474688128
.......................................................................................................................................TATTGCACTTGAGACGGCCG.......................................................................................................................................................................2018251.008251755914937714042953338087485551901022936211
............................................................................................TGGTTCGTCACAAG-GGCAATTCT..............................................................................................................................................................................................................2317910.00791000036188318231716181814294555066325001
............................................................................................TGGTTCGTCACAAG-GGCAATTC...............................................................................................................................................................................................................2217132.00713200038106619111882231661960792403137203
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAT....................................................................................................................................................................2312596.002596031315903193368356901803535125001
.......................................................................................................................................TATTGCACTTGAGACGGCCGAT.....................................................................................................................................................................2211685.0016850543001801983614211402018335000
............................................................................................TGGTTCGTCACAAG-GGCAAT.................................................................................................................................................................................................................2011633.001633010939983232201156237517531005
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAC....................................................................................................................................................................2311221.00122102346002332593522375771321000
........................................................................................................................................ATTGCACTTGAGACGGCCGAA.....................................................................................................................................................................2111218.001218002291002772592362361417417000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAA....................................................................................................................................................................2211192.0011920004700141165304307209478000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATA....................................................................................................................................................................2311064.0010640101001171324093212410940000
.......................................................................................................................................TATTGCACTTGAGACGGCC........................................................................................................................................................................191882.008820163111189212447485471217000
............................................................................................TGGTTCGTCACAAG-GGCAA..................................................................................................................................................................................................................191868.00868010134112141268774242294000
........................................................................................................................................ATTGCACTTGAGACGGCCGA......................................................................................................................................................................201812.008120044721114124201193764541000
.......................................................................................................................................TATTGCACTTGAGACGGC.........................................................................................................................................................................181710.007100340145221193427453101000
...........................................................................................................................................GCACTTGAGACGGCCGA......................................................................................................................................................................171545.005450000001213538000000
............................................................................................TGGTTCGTCACAAG-GGCAATTT...............................................................................................................................................................................................................221478.004780000000101301471001
...........................................................................................................................................GCACTTGAGACGGCCGAAA....................................................................................................................................................................191451.004510000000163441000000
...........................................................................................................................................GCACTTGAGACGGCCGAA.....................................................................................................................................................................181450.004500000001012446000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTA.............................................................................................................................................................................................................241445.00445000700333616314752061000
.......................................................................................................................................TATTGCACTTGAGACG...........................................................................................................................................................................161413.004130000003479390000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAG....................................................................................................................................................................231411.00411006300434614210751742000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................231381.00381000130042371459350010000
.......................................................................................................................................TATTGCACTTGAGACGGCCGT......................................................................................................................................................................211343.003430720001615302320173210000
............................................................................................TGGTTCGTCACAAG-GGC....................................................................................................................................................................................................................171325.003250000000232318000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCA..............................................................................................................................................................................................................231304.00304000300251212288343134000
............................................................................................TGGTTCGTCACAAG-GGCA...................................................................................................................................................................................................................181303.003030001172100512960115000
............................................................................................TGGTTCGTCACAAG-GGCAATTA...............................................................................................................................................................................................................221274.0027400030042232427429158000
............................................................................................TGGTTCGTCACAAG-G......................................................................................................................................................................................................................151270.00270000000302653188000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGG......................................................................................................................................................................211237.0023731411520024251117121202000
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT.....................................................................................................................................................................221191.001910210005667310160000
.............................................................................................................................................ACTTGAGACGGCCGAAA....................................................................................................................................................................171177.001770000000140172000000
............................................................................................TGGTTCGTCACAAG-GGCAATTAAA.............................................................................................................................................................................................................241176.0017600040092856410110000
.......................................................................................................................................TATTGCACTTGAGACGG..........................................................................................................................................................................171170.001700000001925161198001000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAC.....................................................................................................................................................................221163.00163351100016183339184016000
.............................................................................................................................................ACTTGAGACGGCCGAA.....................................................................................................................................................................161161.001610000001200158000000
............................................................................................TGGTTCGTCACAAG-GGCAATA................................................................................................................................................................................................................211149.0014900000022126904114000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAACA...................................................................................................................................................................241149.0014900100024135428511112000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAT....................................................................................................................................................................221148.001480004102320402228046000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAC...................................................................................................................................................................241146.001460031001716553123000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCAA.............................................................................................................................................................................................................241140.00140000110032514618027000
.......................................................................................................................................TATTGCACTTGAGACGGCCGC......................................................................................................................................................................211137.0013700100028445641615000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTGCA...........................................................................................................................................................................................................261114.0011400030029288143110000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATA...................................................................................................................................................................241103.00103000000312372122521000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATAA...................................................................................................................................................................241102.001020000005427487515000
.............................................................................................................................................ACTTGAGACGGCCGA......................................................................................................................................................................15194.00940000002331076000000
............................................................................................TGGTTCGTCACAAG-GG.....................................................................................................................................................................................................................16191.0091000000001288000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGACA....................................................................................................................................................................23185.008500000054212871118000
............................................................................................TGGTTCGTCACAAG-GGCAATTAA..............................................................................................................................................................................................................23180.008000010023332410223000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAG.....................................................................................................................................................................22175.0075005000811171021300000
..............................................................................................................................................CTTGAGACGGCCGAA.....................................................................................................................................................................15171.0071000000202166000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCAAA............................................................................................................................................................................................................25171.00710005000327332001000
.......................................................................................................................................TATTGCACTTGAGACGGCCT.......................................................................................................................................................................20170.00700212000223340033000
...........................................................................................................................................GCACTTGAGACGGCCGAAAA...................................................................................................................................................................20267.501350000000000135000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATT...................................................................................................................................................................24167.0067000020101410840118000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTAA............................................................................................................................................................................................................25161.006100000045162610000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTG.............................................................................................................................................................................................................24161.006100025091151315001000
.........................................................................................................................................TTGCACTTGAGACGGCCGAA.....................................................................................................................................................................20159.00590005009185220000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTGC............................................................................................................................................................................................................25157.0057000020758129500000
.......................................................................................................................................TATTGCACTTGAGACGGCCTG......................................................................................................................................................................21154.005400000014241114000000
.........................................................................................................................................TTGCACTTGAGACGGCCGA......................................................................................................................................................................19150.005000010051271015000000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAA....................................................................................................................................................................21146.00460002005316812000000
..........................................................................................................................................TGCACTTGAGACGGCCGA......................................................................................................................................................................18146.0046000000134038000000
.......................................................................................................................................TATTGCACTTGAGACGGCCA.......................................................................................................................................................................20141.00410130003211281010000
...........................................................................................................................................GCACTTGAGACGGCCG.......................................................................................................................................................................16141.0041000000000041000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAGA...................................................................................................................................................................24141.0041000000751397000000
.............................................................................................GGTTCGTCACAAG-GGCAATT................................................................................................................................................................................................................20140.0040000200007410224000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAC....................................................................................................................................................................22140.00400001001013483001000
..............................................................................................................................................CTTGAGACGGCCGAAA....................................................................................................................................................................16337.331120000000024106000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAG...................................................................................................................................................................24136.0036000000611439210000
........................................................................................................................................ATTGCACTTGAGACGGCCG.......................................................................................................................................................................19135.0035021351030260111000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAGA....................................................................................................................................................................23135.0035000000227519000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAC..................................................................................................................................................................25133.003300010045687110000
..........................................................................................................................................TGCACTTGAGACGGCCGAA.....................................................................................................................................................................19132.0032000010232222000000
............................................................................................TGGTTCGTCACAAG-GGCAT..................................................................................................................................................................................................................19132.0032000000000000032000
........................................................................................................................................ATTGCACTTGAGACGGCC........................................................................................................................................................................18131.0031000020001226000000
..........................................................................................................................................TGCACTTGAGACGGCCGAAA....................................................................................................................................................................20131.0031000000004324000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAT..................................................................................................................................................................25130.0030002100321444000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTGCAAA.........................................................................................................................................................................................................28129.00290000001412300000000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTGCAA..........................................................................................................................................................................................................27125.0025000000109024000000
............................................................................................................................................CACTTGAGACGGCCGA......................................................................................................................................................................16125.002500000045646000000
.......................................................................................................................................TATTGCACTTGAGAC............................................................................................................................................................................15223.50470000001341326000000
.............................................................................................GGTTCGTCACAAG-GGCAATTCT..............................................................................................................................................................................................................22123.002300050003850011000
............................................................................................TGGTTCGTCACAAG-GGCAATTCC..............................................................................................................................................................................................................23123.0023000000111017201000
........................................................................................................................................ATTGCACTTGAGACGGC.........................................................................................................................................................................17122.0022000000000121000000
............................................................................................TGGTTCGTCACAAG-GGCAAA.................................................................................................................................................................................................................20122.0022000000002120215000
............................................................................................TGGTTCGTCACAAG-GGCAATAA...............................................................................................................................................................................................................22119.0019000000004220110000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................22118.001800020032722000000
................................................................................................TCGTCACAAG-GGCAATTC...............................................................................................................................................................................................................18118.0018000000000018000000
.............................................................................................GGTTCGTCACAAG-GGCAATTC...............................................................................................................................................................................................................21118.0018000330000020010000
.......................................................................................................................................TATTGCACTTGAGACGGCGA.......................................................................................................................................................................20115.001500000033621000000
............................................................................................................................................CACTTGAGACGGCCGAAA....................................................................................................................................................................18115.001500000012309000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGACAA...................................................................................................................................................................24115.001500000000651210000
..........................................................................................................................................TGCACTTGAGACGGCCGAAAA...................................................................................................................................................................21114.0014000000112010000000
droSec2
CTAACAA----TTTAAATTTTTAAATTATTATAAATAA-----------------------------TG-GGAATTA-AGTTTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATTT-T---TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCAT-----------------------T--------G-------AGCAAAGTAA---------------------------------------------------------------------------TTAGTTT------TTTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................TATTGCACTTGAGACGGCCGA......................................................................................................................................................................2116003.00600335153211963204
.......................................................................................................................................TATTGCACTTGAGACGGCCGAA.....................................................................................................................................................................2215112.0051123805200960147
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAA....................................................................................................................................................................2312950.0029501767691006108
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................241626.006262532232130
............................................................................................TGGTTCGTCACAAG-GGCAATT................................................................................................................................................................................................................211602.006024065112916
............................................................................................TGGTTCGTCACAAG-GGCAATTCT..............................................................................................................................................................................................................231470.004702765011430
.......................................................................................................................................TATTGCACTTGAGACGGCCG.......................................................................................................................................................................201466.004661844421919
............................................................................................TGGTTCGTCACAAG-GGCAATTC...............................................................................................................................................................................................................221326.003261374812219
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAT....................................................................................................................................................................231292.0029212582814
.......................................................................................................................................TATTGCACTTGAGACGGCCGAT.....................................................................................................................................................................221251.0025198687411
........................................................................................................................................ATTGCACTTGAGACGGCCGAA.....................................................................................................................................................................211238.00238228280
........................................................................................................................................ATTGCACTTGAGACGGCCGA......................................................................................................................................................................201195.00195182292
........................................................................................................................................ATTGCACTTGAGACGGCCGAAA....................................................................................................................................................................221140.00140128183
............................................................................................TGGTTCGTCACAAG-GGCAAT.................................................................................................................................................................................................................201105.001052825502
.......................................................................................................................................TATTGCACTTGAGACGGCCGATA....................................................................................................................................................................23175.00751334226
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAC....................................................................................................................................................................23159.005944492
............................................................................................TGGTTCGTCACAAG-GGCAATTCTGCA...........................................................................................................................................................................................................26144.004422985
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAG....................................................................................................................................................................23144.0044262160
.......................................................................................................................................TATTGCACTTGAGACGGCCGT......................................................................................................................................................................21137.0037414163
.......................................................................................................................................TATTGCACTTGAGACGGCCGG......................................................................................................................................................................21131.003128030
.......................................................................................................................................TATTGCACTTGAGACGGCCGATAA...................................................................................................................................................................24130.003044220
.......................................................................................................................................TATTGCACTTGAGACGGCCGAC.....................................................................................................................................................................22130.003019290
........................................................................................................................................ATTGCACTTGAGACGGCCGAAT....................................................................................................................................................................22129.002921431
............................................................................................TGGTTCGTCACAAG-GGCAATTCA..............................................................................................................................................................................................................23124.0024101112
............................................................................................TGGTTCGTCACAAG-GGCAA..................................................................................................................................................................................................................19123.002331091
.......................................................................................................................................TATTGCACTTGAGACGGCC........................................................................................................................................................................19123.002363113
............................................................................................TGGTTCGTCACAAG-GGCAATTCTA.............................................................................................................................................................................................................24122.002220110
.........................................................................................................................................TTGCACTTGAGACGGCCGA......................................................................................................................................................................19122.002214080
.............................................................................................GGTTCGTCACAAG-GGCAATTCT..............................................................................................................................................................................................................22121.002121000
.......................................................................................................................................TATTGCACTTGAGACGGC.........................................................................................................................................................................18121.002110164
........................................................................................................................................ATTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................23120.002018200
.............................................................................................GGTTCGTCACAAG-GGCAATT................................................................................................................................................................................................................20120.002020000
............................................................................................TGGTTCGTCACAAG-GGCAATTT...............................................................................................................................................................................................................22118.001801440
............................................................................................TGGTTCGTCACAAG-GGCAATTA...............................................................................................................................................................................................................22113.00137330
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT.....................................................................................................................................................................22113.00132452
........................................................................................................................................ATTGCACTTGAGACGGCCG.......................................................................................................................................................................19113.001312010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAG.....................................................................................................................................................................22112.00124251
............................................................................................TGGTTCGTCACAAG-GGCAATTAAA.............................................................................................................................................................................................................24112.00126141
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATT...................................................................................................................................................................24112.00122901
.........................................................................................................................................TTGCACTTGAGACGGCCGAA.....................................................................................................................................................................20111.00119020
.......................................................................................................................................TATTGCACTTGAGACGGCCGACA....................................................................................................................................................................23111.00114061
............................................................................................TGGTTCGTCACAAG-GGCAATTCTG.............................................................................................................................................................................................................24110.00105230
............................................................................................TGGTTCGTCACAAG-GGCAATTCTGC............................................................................................................................................................................................................2519.0095040
.........................................................................................................................................TTGCACTTGAGACGGCCGAAA....................................................................................................................................................................2118.0085030
......................................................................................................................................GTATTGCACTTGAGACGGCCGAA.....................................................................................................................................................................2318.0088000
............................................................................................TGGTTCGTCACAAG-GGCAATTCC..............................................................................................................................................................................................................2318.0084130
............................................................................................TGGTTCGTCACAAG-GGCAATA................................................................................................................................................................................................................2116.0063201
.......................................................................................................................................TATTGCACTTGAGACGGCCGAACA...................................................................................................................................................................2416.0063120
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATTT..................................................................................................................................................................2516.0061500
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATA...................................................................................................................................................................2416.0063300
......................................................................................................................................GTATTGCACTTGAGACGGCCGA......................................................................................................................................................................2216.0066000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAT..................................................................................................................................................................2516.0061230
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAG...................................................................................................................................................................2415.0053020
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAC...................................................................................................................................................................2415.0054001
.......................................................................................................................................TATTGCACTTGAGACGGCCGC......................................................................................................................................................................2114.0040130
............................................................................................TGGTTCGTCACAAG-GGCAATTCTGCAA..........................................................................................................................................................................................................2714.0043010
............................................................................................TGGTTCGTCACAAG-GGCA...................................................................................................................................................................................................................1814.0041120
............................................................................................TGGTTCGTCACAAG-GGCAATTAA..............................................................................................................................................................................................................2314.0040040
........................................................................................................................................ATTGCACTTGAGACGGCCGAAC....................................................................................................................................................................2214.0044000
.........................................................................................................................................TTGCACTTGAGACGGCCG.......................................................................................................................................................................1814.0041030
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAC..................................................................................................................................................................2513.0032010
.......................................................................................................................................TATTGCACTTGAGACGGCCGATC....................................................................................................................................................................2313.0032100
..............................................................................................GTTCGTCACAAG-GGCAATT................................................................................................................................................................................................................1913.0033000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAT....................................................................................................................................................................2113.0031020
.............................................................................................GGTTCGTCACAAG-GGCAATTCTA.............................................................................................................................................................................................................2313.0033000
............................................................................................TGGTTCGTCACAAG-GGCAATTCCA.............................................................................................................................................................................................................2413.0033000
.............................................................................................GGTTCGTCACAAG-GGCAATTC...............................................................................................................................................................................................................2113.0033000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATATA.................................................................................................................................................................2613.0030300
......................................................................................................................................GTATTGCACTTGAGACGGCCGAAA....................................................................................................................................................................2413.0033000
........................................................................................................................................ATTGCACTTGAGACGGCC........................................................................................................................................................................1812.0022000
..............................................................................................GTTCGTCACAAG-GGCAATTCT..............................................................................................................................................................................................................2112.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATG....................................................................................................................................................................2312.0020200
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATTA..................................................................................................................................................................2512.0021100
............................................................................................TGGTTCGTCACAAG-GGCAATTCAAA............................................................................................................................................................................................................2512.0020020
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAG..................................................................................................................................................................2512.0021010
............................................................................................TGGTTCGTCACAAG-GGCAATG................................................................................................................................................................................................................2112.0022000
...........................................................................................TTGGTTCGTCACAAG-GGCAATT................................................................................................................................................................................................................2212.0022000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAG....................................................................................................................................................................2212.0022000
...........................................................................................................................................GCACTTGAGACGGCCGAA.....................................................................................................................................................................1812.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAACT..................................................................................................................................................................2512.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGT.....................................................................................................................................................................2212.0022000
............................................................................................TGGTTCGTCACAAG-GGCAAAA................................................................................................................................................................................................................2112.0020200
............................................................................................TGGTTCGTCACAAG-GGCAATTCAA.............................................................................................................................................................................................................2412.0022000
............................................................................................TGGTTCGTCACAAG-GGCAATTCTT.............................................................................................................................................................................................................2412.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGACAA...................................................................................................................................................................2412.0020020
.........................................................................................................................................TTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................2212.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGTTA....................................................................................................................................................................2312.0020200
.......................................................................................................................................TATTGCACTTGAGACGGCCGTTC....................................................................................................................................................................2312.0021100
........................................................................................................................................ATTGCACTTGAGACGGCCGATA....................................................................................................................................................................2212.0020200
........................................................................................................................................ATTGCACTTGAGACGGCCGAG.....................................................................................................................................................................2112.0022000
droYak3
ATAACAA----TTACCATATTTATATTATTATAAATAAA-------------------------GT-TA-CAAATTG-CGTTTGAAGCGCTTCGGTTCGTCCCAGG-AGCAATTCTGCACTATT---AAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CGAATCATTTA-----------------------A-----------------ACAACG---------------------------------------CATTAA--------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae
.......................................................................................................................................TATTGCACTTGAGACGGCCGGA.....................................................................................................................................................................22140228.004022829141162379517564177410112
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAA....................................................................................................................................................................23116977.0016977233211304355441537001
.......................................................................................................................................TATTGCACTTGAGACGGCCGG......................................................................................................................................................................21113662.00136622488877598601120121100
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAT....................................................................................................................................................................2318548.008548136152566441774656000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAA...................................................................................................................................................................2417644.0076441193255001845616000
.......................................................................................................................................TATTGCACTTGAGACGGCCG.......................................................................................................................................................................2011895.00189546739951834329004
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAC....................................................................................................................................................................2311821.00182144138162114022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGT.....................................................................................................................................................................2211366.0013660346873861752001
........................................................................................................................................ATTGCACTTGAGACGGCCGGA.....................................................................................................................................................................2111230.001230010301944002000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATT...................................................................................................................................................................241536.005361594389251012000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGC.....................................................................................................................................................................221401.0040111136119135000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATA...................................................................................................................................................................241371.0037109426511000001
........................................................................................................................................ATTGCACTTGAGACGGCCGGAA....................................................................................................................................................................221364.0036402401231000000
........................................................................................................................................ATTGCACTTGAGACGGCCGG......................................................................................................................................................................201351.003510318310001001
.......................................................................................................................................TATTGCACTTGAGACGGCC........................................................................................................................................................................191321.003210162938011002
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAC...................................................................................................................................................................241282.002820132663000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAG....................................................................................................................................................................231218.002184581467003000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAAA...................................................................................................................................................................231195.001950162320001000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAT....................................................................................................................................................................221193.001930123672001000
.......................................................................................................................................TATTGCACTTGAGACGGC.........................................................................................................................................................................181132.00132031251101001
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTA....................................................................................................................................................................231124.00124035832004000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAT..................................................................................................................................................................251106.00106018853000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGG.....................................................................................................................................................................221103.001032382730033000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATC...................................................................................................................................................................241103.0010315952000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGA......................................................................................................................................................................21193.0093012782001000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAG...................................................................................................................................................................24182.0082012682000000
............................................................................................CGGTTCGTCCCAGG-AGCAATTCT..............................................................................................................................................................................................................23181.008107810002000
.........................................................................................................................................TTGCACTTGAGACGGCCGGA.....................................................................................................................................................................20180.0080052280000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGT......................................................................................................................................................................21177.00770153960017000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCA....................................................................................................................................................................23171.0071043332020000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATAT..................................................................................................................................................................25162.0062023380001000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGACA...................................................................................................................................................................24162.006218456101000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTAA...................................................................................................................................................................24159.0059020372000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTT..................................................................................................................................................................25158.005885402003000
.......................................................................................................................................TATTGCACTTGAGACGGCCGC......................................................................................................................................................................21153.005301501001000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAC..................................................................................................................................................................25149.004902470000000
........................................................................................................................................ATTGCACTTGAGACGGCCG.......................................................................................................................................................................19137.003703250000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCAA...................................................................................................................................................................24133.0033021813000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGT.....................................................................................................................................................................21133.003302670000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATG...................................................................................................................................................................24131.003166154000000
.........................................................................................................................................TTGCACTTGAGACGGCCGG......................................................................................................................................................................19130.003002460000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAC....................................................................................................................................................................22128.0028110170000000
.........................................................................................................................................TTGCACTTGAGACGGCCGGAA....................................................................................................................................................................21128.0028014140000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGGA....................................................................................................................................................................23128.0028013411000000
.......................................................................................................................................TATTGCACTTGAGACGGCG........................................................................................................................................................................19126.002600260000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATAC..................................................................................................................................................................25123.002305161010000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTC....................................................................................................................................................................23122.002202190001000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGACC...................................................................................................................................................................24121.002110200000000
......................................................................................................................................GTATTGCACTTGAGACGGCCGGA.....................................................................................................................................................................23118.001801620000000
.......................................................................................................................................TATTGCACTTGAGACGGCCC.......................................................................................................................................................................20118.001811151000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGATA...................................................................................................................................................................23117.001701340000000
..........................................................................................................................................TGCACTTGAGACGGCCGGA.....................................................................................................................................................................19116.001601060000000
.........................................................................................................................................TTGCACTTGAGACGGCCGGAAA...................................................................................................................................................................22116.001601240000000
............................................................................................CGGTTCGTCCCAGG-AGCAATTC...............................................................................................................................................................................................................22116.00160853000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATCT..................................................................................................................................................................25114.001400131000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTAA.................................................................................................................................................................26114.00140860000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCC....................................................................................................................................................................23112.001200110010000
.......................................................................................................................................TATTGCACTTGAGACGGCT........................................................................................................................................................................19112.001200120000000
.........................................................................................................................................TTGCACTTGAGACGGCCGGAT....................................................................................................................................................................21112.00120920001000
.......................................................................................................................................TATTGCACTTGAGACGGCCT.......................................................................................................................................................................20111.00111262000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTAC...................................................................................................................................................................24110.00100171001000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAACT..................................................................................................................................................................25110.001000100000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAG..................................................................................................................................................................25110.00100361000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGATT...................................................................................................................................................................23110.00100810001000
......................................................................................................................................GTATTGCACTTGAGACGGCCGGAA....................................................................................................................................................................2419.0090900000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTAAA................................................................................................................................................................2719.0092330001000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAG....................................................................................................................................................................2219.0090810000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAGA...................................................................................................................................................................2419.0090180000000
droEre2
TTAAAAA----TTACCATATTTATATAATTG---ATTA-----------------------------TG-TGAATTA-AGTTTGAAGCGCTTCGGTTCGTACCAGG-AGCAATTCTGCATTTTTTT-TAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CAAAACATTTT-----------------------AAATAAAAA---------------------------------------------------------------------------------------------CTAATAC------TGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head
.......................................................................................................................................TATTGCACTTGAGACGGCCGGA.....................................................................................................................................................................2225641.0011282954069416247664121
.......................................................................................................................................TATTGCACTTGAGACGGCCGG......................................................................................................................................................................2121810.503621296220898129467
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAA....................................................................................................................................................................2321414.5028292344377069336
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAA...................................................................................................................................................................242981.501963179913002941
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAT....................................................................................................................................................................232438.008766457551511818
.......................................................................................................................................TATTGCACTTGAGACGGCCG.......................................................................................................................................................................202417.008345044581621645
........................................................................................................................................ATTGCACTTGAGACGGCCGGA.....................................................................................................................................................................212338.00676657400132
.......................................................................................................................................TATTGCACTTGAGACGGCCGGT.....................................................................................................................................................................222158.50317140147611832
........................................................................................................................................ATTGCACTTGAGACGGCCGG......................................................................................................................................................................20290.0018016820082
........................................................................................................................................ATTGCACTTGAGACGGCCGGAA....................................................................................................................................................................22283.0016615770110
........................................................................................................................................ATTGCACTTGAGACGGCCGGAAA...................................................................................................................................................................23254.0010810700010
.......................................................................................................................................TATTGCACTTGAGACGGCCGT......................................................................................................................................................................21242.0084260314212
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAC....................................................................................................................................................................23237.507553150151
........................................................................................................................................ATTGCACTTGAGACGGCCGGAT....................................................................................................................................................................22234.506955110120
.......................................................................................................................................TATTGCACTTGAGACGGCC........................................................................................................................................................................19230.0060181401198
.......................................................................................................................................TATTGCACTTGAGACGGCCGA......................................................................................................................................................................21222.504525170300
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATA...................................................................................................................................................................24220.50413310133
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAG....................................................................................................................................................................23219.50393620100
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATT...................................................................................................................................................................24219.503914301192
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTA....................................................................................................................................................................23215.003014210103
.........................................................................................................................................TTGCACTTGAGACGGCCGGA.....................................................................................................................................................................20215.00302900010
.......................................................................................................................................TATTGCACTTGAGACGGCCT.......................................................................................................................................................................20213.00261010204
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT.....................................................................................................................................................................22212.50252010193
........................................................................................................................................ATTGCACTTGAGACGGCCG.......................................................................................................................................................................19211.50232100020
.......................................................................................................................................TATTGCACTTGAGACGGCCGGC.....................................................................................................................................................................22210.50217101210
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAC...................................................................................................................................................................2429.00184120110
.......................................................................................................................................TATTGCACTTGAGACGGC.........................................................................................................................................................................1827.5015760002
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTAA...................................................................................................................................................................2427.50151010130
.......................................................................................................................................TATTGCACTTGAGACGGCCGGG.....................................................................................................................................................................2227.0014900410
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAG...................................................................................................................................................................2426.0012930000
.........................................................................................................................................TTGCACTTGAGACGGCCGGAA....................................................................................................................................................................2125.50111010000
............................................................................................CGGTTCGTACCAGG-AGCAATTCT..............................................................................................................................................................................................................2325.5011500042
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAT..................................................................................................................................................................2524.509710100
.........................................................................................................................................TTGCACTTGAGACGGCCGGAAA...................................................................................................................................................................2224.509900000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTT..................................................................................................................................................................2524.509211050
........................................................................................................................................ATTGCACTTGAGACGGCCGGT.....................................................................................................................................................................2124.008500030
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAC..................................................................................................................................................................2524.008620000
.......................................................................................................................................TATTGCACTTGAGACGGCCA.......................................................................................................................................................................2023.507200140
........................................................................................................................................ATTGCACTTGAGACGGCCGGG.....................................................................................................................................................................2123.507700000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAC....................................................................................................................................................................2223.006500010
.......................................................................................................................................TATTGCACTTGAGACGGCCGC......................................................................................................................................................................2123.006500001
............................................................................................CGGTTCGTACCAGG-AGCAATTC...............................................................................................................................................................................................................2223.006600000
......................................................................................................................................GTATTGCACTTGAGACGGCCGG......................................................................................................................................................................2223.006600000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCAA...................................................................................................................................................................2422.505110300
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCA....................................................................................................................................................................2322.505110300
.........................................................................................................................................TTGCACTTGAGACGGCCGG......................................................................................................................................................................1922.505500000
..........................................................................................................................................TGCACTTGAGACGGCCGGA.....................................................................................................................................................................1922.004210001
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTG....................................................................................................................................................................2322.004000013
......................................................................................................................................GTATTGCACTTGAGACGGCCGGAA....................................................................................................................................................................2422.004400000
........................................................................................................................................ATTGCACTTGAGACGGCCGGATT...................................................................................................................................................................2322.004300010
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATAT..................................................................................................................................................................2522.004300010
.......................................................................................................................................TATTGCACTTGAGACGGCCGGGA....................................................................................................................................................................2321.503000300
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTTT.................................................................................................................................................................2621.503000030
......................................................................................................................................GTATTGCACTTGAGACGGCCGGA.....................................................................................................................................................................2321.503300000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAACT..................................................................................................................................................................2521.503210000
.......................................................................................................................................TATTGCACTTGAGACGGCCC.......................................................................................................................................................................2021.503300000
.......................................................................................................................................TATTGCACTTGAGACGGT.........................................................................................................................................................................1821.503000012
.........................................................................................................................................TTGCACTTGAGACGGCCGGAT....................................................................................................................................................................2121.503300000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTAT.................................................................................................................................................................2621.002000020
..........................................................................................................................................TGCACTTGAGACGGCCGGAT....................................................................................................................................................................2021.002200000
.........................................................................................................................................TTGCACTTGAGACGGCCG.......................................................................................................................................................................1821.002200000
...........................................................................................................................................GCACTTGAGACGGCCGGA.....................................................................................................................................................................1821.002200000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAT.....................................................................................................................................................................2221.002100010
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATG...................................................................................................................................................................2421.002100010
........................................................................................................................................ATTGCACTTGAGACGGCCGGATA...................................................................................................................................................................2321.002200000
droEug1
CAGACGG----CTTA--------AGTGAA-----------------------------------AT-TTAA-AATAA-AATTTCTAGTATTTCGGTTCGCCTTTTG-TGCAATTTTAGAGTC------AATAGAAAATTGCACTTCAGACGGCCGGATGACTTGAAATACAAAACATCTT-----------------------AAA----AT-CTAGAA-AACTAAG---------------------------------------TGTTAATTTTT----TGTTAATA------------------------GTTGTAGTTSizeHit CountTotal NormTotal
No Reads
droBia1
CTGCAG-----CGGA---G-----GTGA---------------------------------------TA-TAGG-C-ATATTTTTGGCGTTTCGGTCCGTCCCAGG-AGCAATCCTGTATTT-----CCGACTAGAATTGCACTTGAGACGGCCGGAGTGCTTGAAAA-CAAGG--------AAAGTGCATAGAAACTAACTTAAA----AC--TAGCAG--------------T------------------------CGACCAGCTTTATTTTGCAGGCCGAGGTGGGTGGCAATGCGA----------------TGCTTSizeHit CountTotal NormTotal
No Reads
droTak1
CAGTGA-CAGT-------GTAAAAATTGT-----------------------------------GTGTG-TAAA-C-ATATTTCTGGTGTTCCGGTCCGTCTCAGG-CGCAATTCTGAATTT-----TCACCTAGTATTGCACTTGAGACGGCCGGAATACTTTAAATACGAAACATAAAAA------------------------TGAAAA--TAATAG--------------T----------------------GAAACTTTGCTGTAATTTACATGTCGCGGGCGGTGACAATGCGAGTTAT---GTTTATTACGTATSizeHit CountTotal NormTotal
No Reads
droEle1
CAGTGA-AAAC-------ATTTAAATTTT-----------------------------------ATCTG-TGTA-C-TAATTTCTGGTGTTTCGGTACGTCTATGG-GGCAATTCTGCGTTT-T---CTGGTTAGCATTGCACTTGAGACGGCCGCAACACTTTGGAATAAAAACATTTAAGACAGTTTAAGAAA------------------ATAT-----------------TT-----------------------AATTCGGCATTAATTTATATGTCGCTGGCGGTGACAATACGA-----------------GCATSizeHit CountTotal NormTotal
No Reads
droRho1
CAGTGC-AAAT-------ATTTAAATATA-----------------------------------ATCTG-CGAA-C-AAATTTCTGGTGTTTCGGCTCGTCTCAAA-AGCAATTCTTCGTTTTTC--TTGGCTAGCATTGCACTTGAGACGGCCGCAATACTTTGGATTTAAAACATTTAAGCAAGTTTATTGAA------------------AAAG-----------------TT-----------------------ATTTTTGCATTAATTTATATGTCGCTGGCGGTGACAATACAAGTTGTTGGTTTTTTTTCGTATSizeHit CountTotal NormTotal
No Reads
droFic1
CTAAAGT----TTGCAA-GTTTTAATTAA-----------------------------------ATCGGGAAAA-C-CAATTTCGAGTGTTTCGGT-CGTCTTGGGTGGCAATACTAAATTAACTTTATGGCTAGCATTGCACTTGAGACGGCCGAAATGCTTTAAATTTATAACATCTAAG------------------------CAAGAC-------------------------------------------------------CCAAAATTCTGAGCCGTGGACAGTGATAATGC-------------------GATTSizeHit CountTotal NormTotal
No Reads
droKik1
AGTCTT-------------CTTGAAAGAAGATAAA--------------------------------CA-AAAGCTC-CGGCCGTAAAGGTCTGTGCTGTTTGAGG-TGCAAATCTGTGGTT-A---ATAGCCAGAATTGCACTTGAAACGGCCAGATCAAGGCGGCC-CAAAACATCGCAA------------------------CAAAAA-------------------------------------------------------TTTAGACAATTGTTCGGGTAC-----------------TTGG----AATTTGCCTSizeHit CountTotal NormTotal
No Reads
droAna3
CAATTTA----ATAAAAAATAAATAATAGTG-----T--TTGTGCTTTTTAAAAAAAACATCTA--------------------CAATTTTCCGGTGCGTCTCTAG-TGCAACTCTTGGTTTTT---TATACAAGTATTGCACTTGAGACGGCCGAAATATAGTGGAT-CTAAGCGGCTA-----------------------T--------A-------ACCGAA----AAGT-TTTCAGGAGCTAAAAAGTGTTTAGAACTTCGATTTTATTTGTAGGTCGCGGAAGGTTGCAATGCGT-----------------ATTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAA....................................................................................................................................................................231108255.0010825514561054241248131068
.......................................................................................................................................TATTGCACTTGAGACGGCCGA......................................................................................................................................................................211103377.0010337739189642025834838820
.......................................................................................................................................TATTGCACTTGAGACGGCCGAA.....................................................................................................................................................................22131472.0031472147328985720262626
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................24125826.0025826557245087346210
.......................................................................................................................................TATTGCACTTGAGACGGCCG.......................................................................................................................................................................20110555.00105558509044492151459
............................................................................................CGGTGCGTCTCTAG-TGCAACT................................................................................................................................................................................................................2113186.00318612119251130172
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGC.......................2312768.0027682401905485611220
.......................................................................................................................................TATTGCACTTGAGACGGCC........................................................................................................................................................................1912545.00254523249027140
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAT....................................................................................................................................................................2312291.002291412148555420
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATG........................2212067.00206718314214225315
.......................................................................................................................................TATTGCACTTGAGACGGCCGAT.....................................................................................................................................................................2211407.001407351307303302
.....................................................................................................................................................................................................................................................................................AGGTCGCGGAAGGTTGCAATGC.......................2211374.001374973623932041587
........................................................................................................................................ATTGCACTTGAGACGGCCGAAA....................................................................................................................................................................2211249.0012497311714010
........................................................................................................................................ATTGCACTTGAGACGGCCGA......................................................................................................................................................................2011115.0011152668369130
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAG....................................................................................................................................................................2311110.0011109108316110
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAC....................................................................................................................................................................231973.009731294316020
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAAT.........................211826.00826245082592294
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAT...................................................................................................................................................................241616.00616659114140
.......................................................................................................................................TATTGCACTTGAGACGGCCGAC.....................................................................................................................................................................221526.00526351211000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGCAA-----------------....251468.0046837223208000
........................................................................................................................................ATTGCACTTGAGACGGCCGAA.....................................................................................................................................................................211458.004581033502030
............................................................................................CGGTGCGTCTCTAG-TGCAACC................................................................................................................................................................................................................211440.0044014372000
.......................................................................................................................................TATTGCACTTGAGACGGCCGG......................................................................................................................................................................211375.0037517117131110
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGCA......................241358.0035829219109010
.....................................................................................................................................................................................................................................................................................AGGTCGCGGAAGGTTGCAATGCG......................231355.00355156423081109
.......................................................................................................................................TATTGCACTTGAGACGGC.........................................................................................................................................................................181341.0034193283010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAC...................................................................................................................................................................241341.00341332412011
.......................................................................................................................................TATTGCACTTGAGACGGCCGT......................................................................................................................................................................211335.0033517269252193
........................................................................................................................................ATTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................231314.00314342791000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAA..........................201251.0025124125624333
.........................................................................................................................................TTGCACTTGAGACGGCCGAAA....................................................................................................................................................................211215.0021552100000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAG.....................................................................................................................................................................221203.00203131759141
.........................................................................................................................................TTGCACTTGAGACGGCCGA......................................................................................................................................................................191178.00178151620010
.......................................................................................................................................TATTGCACTTGAGACGGCCGATT....................................................................................................................................................................231170.00170514521161
.....................................................................................................................................................................................................................................................................................AGGTCGCGGAAGGTTGCAATG........................211169.001694350155524
............................................................................................CGGTGCGTCTCTAG-TGCAACTCT..............................................................................................................................................................................................................231162.00162123304257
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAG...................................................................................................................................................................241156.0015631485000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAT..................................................................................................................................................................251130.0013011235010
............................................................................................CGGTGCGTCTCTAG-TGCAACTC...............................................................................................................................................................................................................221129.00129862015350
............................................................................................CGGTGCGTCTCTAG-TGCAAC.................................................................................................................................................................................................................201127.0012709631000
.......................................................................................................................................TATTGCACTTGAGACGGCCGC......................................................................................................................................................................211112.0011206546100
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGA.......................231105.0010548316110
.......................................................................................................................................TATTGCACTTGAGACGGCCA.......................................................................................................................................................................20199.009911853000
.......................................................................................................................................TATTGCACTTGAGACGGCCC.......................................................................................................................................................................20197.00970925000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATA........................22196.009675434010
........................................................................................................................................ATTGCACTTGAGACGGCCG.......................................................................................................................................................................19191.009137530010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAACA...................................................................................................................................................................24174.00744637000
.........................................................................................................................................TTGCACTTGAGACGGCCGAA.....................................................................................................................................................................20173.00733690010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAC..................................................................................................................................................................25169.00692652000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAAA...................................................................................................................................................................22166.00664620000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATA...................................................................................................................................................................24162.00621574000
..........................................................................................................................................TGCACTTGAGACGGCCGAAA....................................................................................................................................................................20160.00601590000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAAC.........................21155.00550541000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGT.......................23155.005533910030
.......................................................................................................................................TATTGCACTTGAGACGGCCT.......................................................................................................................................................................20155.00556386041
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATT........................22155.005502721070
.....................................................................................................................................................................................................................................................................................AGGTCGCGGAAGGTTGCAATGCGA-----------------....24154.005402350170
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCA...........................19151.00511116111111
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAG..................................................................................................................................................................25149.00491471000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGCT......................24147.00472387000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATAA.......................23145.004512320010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAGA...................................................................................................................................................................24143.00431402000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATC....................................................................................................................................................................23137.00370343000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAAA.........................21135.00354189040
..........................................................................................................................................TGCACTTGAGACGGCCGA......................................................................................................................................................................18135.00351340000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATAAA......................24133.003331416000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGAAA-----------------....25132.00323218000
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT.....................................................................................................................................................................22131.00313251020
.....................................................................................................................................................................................................................................................................................AGGTCGCGGAAGGTTGCAATT........................21130.00301110225
.......................................................................................................................................TATTGCACTTGAGACGGCT........................................................................................................................................................................19129.00290281000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGCC......................24129.00290272000
.....................................................................................................................................................................................................................................................................................AGGTCGCGGAAGGTTGCAATGCGT-----------------....24128.00285641120
...........................................................................................................................................GCACTTGAGACGGCCGAAA....................................................................................................................................................................19127.00270270000
....................................................................................................................................................................................................................................................................................TAGGTCGCGGAAGGTTGCAATGAA......................24126.00261169000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAT....................................................................................................................................................................22126.00260260000
........................................................................................................................................ATTGCACTTGAGACGGCC........................................................................................................................................................................18125.00253220000
droBip1
CAATTAA----AAAAAAAATAATAATTGCA------A--GTGTGTGTGTTTGGATTTATGTCTA--------------------CAATTTTCGGGGTCATCTCCAG-TGCAAATCTTGGTTTTT---CCAACAAGAATTGCACTCGAGACGGCCAGAATATTGTGGAT-CTATGCAGCTA-----------------------C--------A-------AGCCGA----AAGT-GTTTAGAAGTTAGCAAGTGATTATGATTTCGATTTTATTTGTAGGTTGTGGAAGGTTGCAAAGCGT-----------------ATTTSizeHit CountTotal NormTotal
No Reads

Generated: 01/23/2015 at 08:58 PM