ID:

hansen-dme-cand-1

 Coordinate:

chr2R:3460594-3460656 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.1 -23.0 -22.9

Sense Strand Reads

CAGAAGGCAATGGATGCCTATGAAACGGCCACTCGTATGAAACTAAATATCCGCATCAAGGCTCCCATTATCATTGTGCCAATTGGGTCACAGGACAGGAATGCCTTGCTGCTCGATTTGGGCTTACTGGAGCTAACGAATAACACGGTGGAGGTGGCGGTGG
************************************......((((((....(((.(((((((((.....((.(((((((.....)).)))))))..)))..)))))).)))...))))))****************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM609229
embryo 2-6hr
 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2
 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 M029
OSC cells (nuclear)
 SRR065155
Piwi bound piRNAs from tj GAL4 > RNAi-fs(1)Yb ovaries
 M003
dcr-2[G31R] male total RNA  
 GSM399110
KC-48 #2
 GSM609222
ML-DmBG1-C1		 V146
S1 cell		 M005
ML-DmD32 cell		 SRR010959
Ago3 IP in heterozygotes
AGO3
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 GSM609225
ML-DmBG3-C2		 GSM609238
embryo 14-24hr
 SRR010953
Aub heterozygotes, oxidized
 GSM467731
Dmel_loq_sRNAseq
 M004
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 GSM286613
0-1hr #1 (A)
 GSM322338
2-4day pupae#2
 GSM360262
0-2d pupae
 GSM322543
male head #1
 GSM609242
s2+48 #2
 SRR010956
Piwi IP in Ago3 heterozygotes
 SRR010957
Aub IP in Ago3 trans-heterozygotes
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 SRR060644
A2_ovaries_total
 SRR060647
A2_ovaries_FLAG-Ago2
AGO2
 SRR060651
A2_ovaries_Ago3
AGO3
 SRR065152
Piwi bound piRNAs from tj GAL4 > RNAi-piwi ovaries
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 GSM609240
IR+ 2-18hr
 V008
S2-DRSC		 V091
fGS/OSS total  		 V141
Heat_female_body
 V073
mbn2 		GSM609224
female, one day
 SRR029633
total small RNAs from hen1 homozygous flies
 GSM609223
male, one day
 V086
female body, aged
 GSM272652
S2 -48 Biological Replicate #1
 SRR031700
2'-O-methylated small RNAs from dcr-2 homozygous flies
 V015
DreRFHV148h
 GSM609217
MLDmD20c5		 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 GSM399107
male body #2
 GSM385748
OSS_s6		 GSM385821
OSS_s7		 SRR001348
ago2_oxidized
 GSM343833
S2R+ cell		 SRR010954
Aub trans-heterozygotes, oxidized
 SRR010958
Piwi IP in Ago3 trans-heterozygotes
 V136
Male aged body
 GSM313160
dcr-2 homozygous, oxidized
 GSM379061
Squ Heterozygote
 GSM379066
Zuc Mutant
 GSM379067
SpnE Mutant
 GSM399105
disk #2
 GSM322533
female head #1
 GSM399106
female body #2
 GSM360257
1st instar #2
 SRR010955
Aub IP in Ago3 heterozygotes
 SRR010960
wt, oxidized
 SRR097867
Drosophila S2-NP cells
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 SRR341115
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 SRR341116
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 SRR341118
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 T004
OSC
 GSM399100
Kc167 cell		 GSM609231
ago2[414], ovary, AGO1IP
AGO1
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1
 V096
loqsKO/f00791 ovary
 V125
ML-DmD9		 V126
CME L1 		V144
OSC		 SRR031692
Total small RNAs from Oregon R
 SRR029608
total small RNAs from hen1 heterozygous flies
 V079
Oxidation, female head
 GSM609239
IR- 2-18hr
 GSM343832
S2R+ cell		 GSM628272
ago2[414] ovary total RNA
 GSM399101
kc167 cell		 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 SRR031703
Total small RNAs from r2d2 homozygous flies
 M036
S2-R+ cells, Ago1-IP, dsDcr1
AGO1
 SRR001349
heterozygous_dcr-2_untreated
 V034
ML-DmD16c3 cell		 V078
Desiccation, female head
 GSM385744
OSS_s2		 GSM322245
3rd instar #1
 V006
r2d2 female: possibly heterozygous
 GSM385822
OSS_s8		 GSM286605
2-6h #1 (8)
 M006
ML-DmD32 		SRR001339
WT_females_non-beta-eliminated
 V022
ML-DmD32 cell		 GSM609232
r2d2[1] ovary total RNA  
 V137
Male aged head
 SRR065802
Piwi-IP_zuc_mut_ovaries
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 GSM609251
aged female head
 GSM609219
GM2 cell		 GSM609237
ago2[414] ovary total RNA
 V140
Dessication_female_body
 SRR001341
WT_males_non-beta-eliminated
 SRR014272
Embryo_0-2hrs_rep1_wK_0_2hr_Emb
 SRR014281
Ovary_rep1_wK(fem)_x_w1118(male)_F1
 SRR032093
ago1 knockdown
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1
 V0632
wt ovary AGO1-IP, reseq
AGO1
 GSM371638
S2-NP		 V077
cold, female head
..................................................................................TTGGGTCACAGGACAGGAATGCCT......................................................... 24 0 1 4.00 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TAACACGGTGGAGGTGGC..... 18 0 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GGACAGGAATGCCTTGCTGCT.................................................. 21 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCACTGTGCCAATTGTGTCTCA....................................................................... 22 3 2 3.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATTTGGGCTTACTGGAGCTAAC.......................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTACTGGAGCTAACGAATAACACGGT.............. 26 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCATTGTGCCAAGTGAGTCTCA....................................................................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................ATCCGCATCAAGGCTCCCATT.............................................................................................. 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGCTCGATTTGGGCTTACTGGAGCT............................. 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................ACTGGAGCTAACGAATAAC................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TGGAGCTAACGAATAACACGG............... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AGGACAGGAATGCCTTGCT..................................................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TGAAACTAAATATCCGCATCAAGG...................................................................................................... 24 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AACGAATAACACGGTGGAGGT........ 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCATTGTGCCAAGTGTGTCTCA....................................................................... 22 3 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCACTGGGCCAATTGGGTCTCA....................................................................... 22 3 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GCTATGGACGCTTATGAAA.......................................................................................................................................... 19 3 20 1.10 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0
...........................GCAACTCGTATGAAACTA...................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GGACAGGAATGCCTTGCTGCTCG................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TCGATTTGGGCTTACTGGAG............................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCATTGTGCCAATTGGGTCA......................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGATCGAACGATTAACACGG............... 20 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCATTGTGCTAATTGGATCAC........................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TCGATTTGGGCTTACTGGAGCTAAC.......................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TATCATTGTGCCAATTGGGTCACAGGAC................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GCTAACGAATAACACGGTGGAGG......... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GAATGCCTTGCTGCTCGATTTGGGCT....................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TACTGGAGCTAACGAATAACACGGT.............. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AACACGGTGGAGGTGGCGGTG. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................ATTGGGTCACAGGACAGGA............................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................ATGAACCTAAATATCCGC............................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TACTGGAGCTAACGAATAAC................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TAACACGGTCGCGGTGGCGGGGG 23 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AGGACAGGAATGCCCTGCT..................................................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CAATTGGGTCACAGGACAG................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CACAGGACAGGAATGCCTTGCTGC................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AATGGATGCCTATGAAACGGCC..................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TCCGCATCAAGGCTTCCATTATCA.......................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTGCTGCTCGATTTGGGCTTCCTGG................................. 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TACTGGAGCTAACGAATAACA.................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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......................................................ATCAAGGCCCCCACTATCAC......................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CAAGGCTCCCGTTATCTCT........................................................................................ 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GATCCCTATAAAACGGC...................................................................................................................................... 17 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AGGAAATGGACGCCTATG............................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GGCTATGGATGCTTATGAAAA......................................................................................................................................... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGAGCGAACGATTAAAACGG............... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AATAATTCGGTGGAGGTGGGG.... 21 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CAAATGGGTTAAAGGACAGGA............................................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GAAGTCATTGGATGCTTATG............................................................................................................................................. 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AATGGATGGCGCTGAAACGG....................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGACACGGCGGAGGTCGCG.... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ATAACTCGGTGGAGGTGTTG.... 20 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TGAACTTCAATATCCGCATC.......................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATGGATGCTTATGAAAAG........................................................................................................................................ 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GATGGAACTAAGTATCCGC............................................................................................................. 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CTGCCTTGCTGTTCGATT............................................. 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CATTGTGCTAATTTGATCAC........................................................................ 20 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................ATTGTGGGAATTGGGTCA......................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GTGCGAATTGGGTCTCCGG..................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CATTGAGCCAATTGCGGCAC........................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATGGATGCTTATGAAAAAGC...................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATAACGAATAACCCGGTGT............ 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................TGGAACGGACAGTCGTATG............................................................................................................................ 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AATTGAGTCACAGGATGGGA............................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................TAAATATCCGGACGAAGGC..................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................GAGACTAAAGGTCCGCAT........................................................................................................... 18 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GCCAACTGGGTCTGAGGAC................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................TTGCTCCTCGATTTGGCC........................................ 18 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................GAACACGGCGGGGGTGGCGG... 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AAAACCGCGACTCGTATGA........................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................ACACGGTGAAGGTTGTGGT.. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CACGGTGGAGGTAGCGAAG. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................CCATATCCGCAGCAAGGCT.................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TAATGGATGCCTATGATAG......................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CACGAATACCCTGCTGCTC................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................ATCATTGTGACAGCTGGGT........................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................GGGTACAGAACAGGAATG............................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCTTTCTGCTCGATTTTGGT........................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................TTTGGGCACAGGGCAGGAA.............................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CGAAACCATATATCCGCAT........................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................GAGAAACACGGGGGAGGT........ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TCACCGTGCCTATTGGGT........................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TATCATTGTGATATTTGGGT........................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CCACCGCCACCTCCACCGTGTTATTCGTTAGCTCCAGTAAGCCCAAATCGAGCAGCAAGGCATTCCTGTCCTGTGACCCAATTGGCACAATGATAATGGGAGCCTTGATGCGGATATTTAGTTTCATACGAGTGGCCGTTTCATAGGCATCCATTGCCTTCTG
******************************************((((((...(((.((((((..(((..(((((((.((.....))))))).)).....))))))))).)))....))))))......************************************ 		Read size # Mismatch Hit Count Total Norm Total M006
ML-DmD32 		V146
S1 cell		 GSM399110
KC-48 #2
 SRR029028
untreated (mock)
 V144
OSC		 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2		 SRR031703
Total small RNAs from r2d2 homozygous flies
 GSM361908
s2-48 Biological Replicate #2
 V125
ML-DmD9		 GSM609222
ML-DmBG1-C1		 V074
S3		 V073
mbn2 		SRR032096
AGO2 IP dcr2 knockdown
AGO2		 SRR097866
Drosophila S2-NP cells
 SRR097867
Drosophila S2-NP cells
 SRR341117
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 GSM628272
ago2[414] ovary total RNA
 V132
ML-DmD32 		V140
Dessication_female_body
 V036
ML-DmD20c5 cell		 GSM609227
CMEW1 Cl.8+ cell		 V128
S3 		SRR031692
Total small RNAs from Oregon R
 GSM609223
male, one day
 M005
ML-DmD32 cell		 GSM609224
female, one day
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1		 V085
CME W2 wing disc		 M037
S2-R+ cells, Ago1-IP, dsDcr2
AGO1		 V086
female body, aged
 GSM280087
S2cell (AGO2IP)
AGO2		 GSM467731
Dmel_loq_sRNAseq
 M031
OSC cells (whole cell)
 GSM385744
OSS_s2		 GSM272653
KC -48 #1
 GSM360260
0-1d Pupae (w)
 SRR001344
dcr-2_beta-eliminated
 SRR029031
loqs-ORF knockdown
 SRR298537
strain: vret148-60/vret148-60genotype/variation: Vret Mutant
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 SRR341115
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 SRR341116
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 V012
Dcr2 male (Katsutomo, whole fly?)
 GSM609231
ago2[414], ovary, AGO1IP
AGO1		 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1		 SRX247212
AGO1-IP from S2-R+, FLAG-HA-AGO2
AGO1		 GSE24544
dcr-2[L811fsX] ovary total RNA
 V130
ML-DmBG3-c2 		V131
ML-DmD16-c3 		V134
ML-DmD8 		V138
Male cold body
 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 GSM609217
MLDmD20c5		 V034
ML-DmD16c3 cell		 GSM322543
male head #1
 SRR001348
ago2_oxidized
 SRR010958
Piwi IP in Ago3 trans-heterozygotes
 V0632
wt ovary AGO1-IP, reseq
AGO1		 GSM609225
ML-DmBG3-C2		 GSM628271
r2d2[1] ovary total RNA  
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 SRR029633
total small RNAs from hen1 homozygous flies
 M003
dcr-2[G31R] male total RNA  
 SRR001339
WT_females_non-beta-eliminated
 SRR010959
Ago3 IP in heterozygotes
AGO3		 GSM360262
0-2d pupae
 SRR029608
total small RNAs from hen1 heterozygous flies
 M038
S2-R+ cells, Ago1-IP, dsR2D2
AGO1		 V079
Oxidation, female head
 GSM286602
male body
 V008
S2-DRSC		 V091
fGS/OSS total  		 SRR010953
Aub heterozygotes, oxidized
 SRR001349
heterozygous_dcr-2_untreated
 M039
S2-R+ cells, Ago1-IP, dsAgo2
AGO1		 GSM609232
r2d2[1] ovary total RNA  
 GSM609234
CS  male total RNA  
 V092
dcr-2[G31R] male total RNA  
 SRR010954
Aub trans-heterozygotes, oxidized
 SRR001664
homozygous_dcr-2_untreated
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 V014
DTT 8h
 GSM385821
OSS_s7		 SRR031701
Total small RNAs from r2d2 heterozygous flies
 SRR065152
Piwi bound piRNAs from tj GAL4 > RNAi-piwi ovaries
 M004
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 GSM609237
ago2[414] ovary total RNA
 V096
loqsKO/f00791 ovary
 GSE24545
CS ovary total RNA
 V148
mbn2
............................................................................................ATAATGGGAGCCTTGATGCGG.................................................. 21 0 1 7.00 7 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TAATGGGAGCCTTGATGCGGA................................................. 21 0 1 6.00 6 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................................................................................................................TTTCATAAGCATCCATAGC...... 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CATACGAGGGGTCGATTC..................... 18 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATGCTGAGATTTAGTTTC...................................... 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AATGATACTGGGAGAATTGA....................................................... 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................ATTGGCACAATGAGAATA................................................................. 18 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............ACCTTATGATTCGTTAGCT.................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................GAAGGGCCGTTTCAAAGGC............... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................GAGCAGCGGGGCGTTCCT................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................GCTTTGATCCGGATATTTC........................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GCGGGCCTTGATGCGGAAA............................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................CCTTATGCGGCTATTTAGT......................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGTTTGATACGAGTGGCG.......................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GACATCCGAGTGGCCGTTT...................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................GCAGCCAAGCATTCCCGTC............................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................TTCCTTAGATCCAGTGAGC......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................TACTAGTGGCTGTTTCAGA.................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dm3 chr2R:3460544-3460706 + CAGAAGGCAATGGATGCCTATGAAACGGCCACTCGTATGAAACTAAATATCCGCATCAAGGCTCCCATTATCATTGTGCCAATTGGGTCACAGGACAGGAATGCCTTGCTGCTCGATTTGGGCTTACTGGAGCTAACGAATAACACGGTGGAGGTGGCGGTGG
droSim2 2r:4307987-4308149 + CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGTATGAAACTAAATATCCGCATCAAGGCGCCCATTATCATTGTGCCAATTGGATCACAGGACAGGAATGCCTTGATGCTCGATTTGGGCTTGCTGGAGCTAACGAATAACACGGTGGAGGTGGCGGTGG
droSec2 scaffold_1:1123771-1123933 + CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGTATGAAACTAAATATCCGCATCAAGGCGCCCATTATCATTGTGCCAATTGGATCACAGGACAGGAATGCCTTGATGCTTGATTTGGGCTTGCTGGAGCTAACGAATAACACGGTGGAGGTGGCGGTGG
droYak3 2L:16138400-16138562 + CAGAAGGCAATGGATGCATACGAAACGGCAACGCGCATGAAACTAAATATTCGCATCAAGGCGCCCATTATCATTGTGCCAATAGGCTCACAGGACAGAAATGCCTTGCTGCTCGATTTGGGCTTGCTGGAGTTAACAAATAACACGGTGGAGGTACCGGTGA
droEre2 scaffold_4929:19137148-19137310 - CAGAAGGCAATGGATGCCTATGAAACGGCCACGCGTATGAAGCTAAATATCCGCATCAAGGCGCCCATTATCATTGTGCCAATAGGCTCACAGGACAGAAATGCGTTGCTGCTCGATTTGGGTTTGCTGGAGCTAACAAATAACACGGTGGAGTTGGCGGTGA
droEug1 scf7180000409672:5477829-5477991 + CAGAAAGCTATGGATGCTTACGAAACGGCTACTCGCATGAAACTAAATGTCCGTATTAAGGCGCCGATTATCATCATACCAATTAGCTCCCAGGACTCTAATGCTTTGTCGCTAGATTTGGGTCTGCTGGAATTGACGAACAATACTGTGGAAATGGCGGTGG
droBia1 scf7180000302292:2673426-2673588 - CAGAAGGCAATGGATGCCTACGAAACAGCAACTAGGATGAAGCTAAATATCCGCATCAAGGCGCCCATTATCATCGTGCCTATTAGCTCCGAGGACACCAACGCCCTGTCCCTCGATTTGGGTCTGCTGGAGCTGTCGAACAACACCGTGGAGGTGGCGGTGC
droTak1 scf7180000416016:68176-68338 + CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGCATGAAACTGAATGTCCGCATCAAGGCGCCCATTATCATCGTGCCAATAAGCTCCGAGGACACAACCGCTCTATCGCTCGATTTGGGTCTCTTGGAGCTGACGAACAACACGGTGGAGGTGGCGGTGG
droEle1 scf7180000491347:306927-307089 + CAGAAGGCACTGGATGCCTACCAAACGGCCACCCGCATGAAGCTGAATGTCCGCATCAAGGCACCCATTATCATTGTGCCAGTTGGCTCAAAGGACTCGAATGCCCTGTCGCTCGACTTGGGTCTGCTGGAGCTGACGAACAACACGGTGGAGGTGGCGGTGG
droRho1 scf7180000780108:52367-52529 + CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGCATGAAGCTGAATGTCCGCATTAAGGCCCCTATTATCATCATACCAGTTGGCTCCACGGAATCGAATGCCCTGTCGCTCGATTTGGGTCTGCTGGAGTTGACGAACAACACGGTGGAGGTGGTAGTCG
droFic1 scf7180000453948:221373-221535 + CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGCATGAAGCTGAATGTCCGCATTAAGGCGCCCATTATCATTGTGCCAATTGGCTCAAACGACTCGAATGCCCTGTCACTTGATCTGGGTCTGCTGGAGTTGACGAACAACACTGTTGAGGTCGCGGTAC
droKik1 scf7180000302355:648135-648297 - CAGAAGGCCATGGATGCCTACGAAACGGCCACGCGAATGAAGCTTAATATTCGCATCAAGGCCCCTATTATCATAGTGCCCACTAGTTCTCGGTCCCTGAATGCATTGGCGCTTGACTTGGGACTGCTAGAGTTGACGAACAACACGGTGGAGATAGCGGTGG
droAna3 scaffold_13266:9981599-9981761 + CAGAAGGCATTGGATGCCTATGATACAGCAACTCGTCTCAACCTCAACATACGCATCAAGGCTCCGGTCATCGTGATACCCACTTGCTCGCATTCCAACGATGCACTCTGCCTAGATTTGGGTCTGCTGGAGATCACGAATAACACGGCAGAGATTACAGTGC
droBip1 scf7180000396759:1698459-1698621 + CAGAAGGCATTGGATGCCTATGAAACGGCCACTCGTCTCAACCTTAATATCCGCATCAAGGCACCTGTCATCGTGATACCCACTTGCTCGGTTTCCAGCGATGCCCTCTGCTTAGATTTGGGTCTGCTGGAGATCACGAATAACACGGCAGAGATTACTGTGC
dp5 3:12282649-12282811 - CAGAAGGCGATGGATGCCTACGAAACGGCGACGCGCATGAAGCTAAATGTGCGGATAAAGGCACCCATCATTATCATACCCATCGACTCCAGGAGCAGGGATGCACTGTCCCTCGATCTGGGCATGCTGGAGCTAACGAACAACACTGTGACTGTCCCAGTGG
droPer2 scaffold_44:463886-464048 - CAGAAGGCGATGGATGCCTACGAAACGGCGACGCGCATGAAGCTAAATGTGCGGATTAAGGCACCCATCATTATCATACCCATCGACTCCAGGAGCAGGGATGCACTGTCCCTCGATCTCGGCATGCTGGAGCTAACGAACAACACTGTGACTGTCCCAGTGG
droWil2 scf2_1100000004382:237274-237436 - CAAAAGGCTATGGATGCCTATGAAACGGCCACGCGGATGAAACTTAATGTGCGTATTAATGCTCCCATAATCATCATTCCAGTGGACTCGAAGAGCTGTAACGCATTGTCCTTGGACTTGGGTATGCTGGAATTGACAAATAATACCATTGAGGTTCCAGTAC
droVir3 scaffold_12875:14514617-14514779 + CAAAATGCAATCGATGCCTATGAAAAGGCGACGCGCATTAAGCTAAATGTGCGCATCAAGGCGCCTATTATATGCGTACCTGTTGACTCGCAAAGCAAAAATGCGCTGGCCATTGACTTCGGCTTGCTGGAGATAACAAACAACACCAGTGAGGTGACAGTAG
droMoj3 scaffold_6496:9983337-9983499 + CAAAACGCCATCAATGCCTACGAAAAGGCAACGCGCATGAAACTGAATATTAGAATTAAAGCGCCTGTTATACTGGTGCCGGTGGATTCACAAAGCACAGATGCATTGGCCATTGATTTGGGCTTGCTGGAGATGACAAATACAACTATCGAGACGCCAGTGC
droGri2 scaffold_15245:14520095-14520257 + CAGGCCACATTGGAGGCATATGAGAAAGCGACACGCATGAAGCTAAATGTGCGCATCAAGGCGCCCATTATAGTTGTGCCTGTGGATTCGCAGAGCAGAAATGCTCTGGCCATTGATTTGGGTTTGCTGGAGATGACAAACAACACCAGTGAGCTGTCAGTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGTATGAAACTAAATATCCGCATCAAGGCGCCCATTATCATTGTGCCAATTGGATCACAGGACAGGAATGCCTTGATGCTCGATTTGGGCTTGCTGGAGCTAACGAATAACACGGTGGAGGTGGCGGTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis
.............................................................................GCCAATTGGATCACAGGACAG.................................................................2113.00302100000000000
.................................................................................ATTGGATCACAGGACAGGAATGCCTT........................................................2612.00200200000000000
....................................ATGAAACTAAATATCCGCATCAAGGC.....................................................................................................2611.00101000000000000
.............................................................................................................TGCTCGATTTGGGCTTGCTGG.................................2111.00100000000001000
.......................................................................CATTGTGCCAATTGGATCACA.......................................................................2111.00101000000000000
............................................................................................GGACAGGAATGCCTTGAT.....................................................1811.00100010000000000
....AGGCAATGGATGCCTACGAAACGG.......................................................................................................................................2411.00100010000000000
....................................................................................................ATGCCTTGATGCTCGATTTGGGCT.......................................2411.00100010000000000
.....................................................................ATCATTGTGCCAATTGGATC..........................................................................2011.00101000000000000
......................................................................TCATTGTGCCAATTGGAT...........................................................................1811.00101000000000000
.............................................................................................GACAGGAATGCCTTGATG....................................................1811.00100010000000000
..................................................................................................................................................GGTGGAGGTGGCGGTG.1690.11100000000001000
droSec2
CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGTATGAAACTAAATATCCGCATCAAGGCGCCCATTATCATTGTGCCAATTGGATCACAGGACAGGAATGCCTTGATGCTTGATTTGGGCTTGCTGGAGCTAACGAATAACACGGTGGAGGTGGCGGTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................CACGGTGGAGGTGGCGGT..1811.0010010
...........................................................................................................GATGCTTGATTTGGGCTT......................................1811.0010001
...........................................................................GTGCCAATTGGATCACAGG.....................................................................1911.0010010
....................................ATGAAACTAAATATCCGCATCAAGGC.....................................................................................................2611.0010010
..............................................................................................................GCTTGATTTGGGCTTGCTGGA................................2111.0010100
...............GCCTACGAAACGGCCACGCGT...............................................................................................................................2111.0010010
.................CTACGAAACGGCCACGCGTATGA...........................................................................................................................2311.0011000
...........................................................................................................GATGCTTGATTTGGGCTTGCTGGA................................2411.0010100
....................................................................................................................TTTGGGCTTGCTGGAGCTAACGAATAAC...................2811.0010001
............................................................................................................ATGCTTGATTTGGGCTTGCTGGAGC..............................2511.0010010
.............................................................................................................................................AACACGGTGGAGGTGGCGGT..2011.0010100
............................................................................................................ATGCTTGATTTGGGCTTGCTGGAG...............................2411.0010010
droYak3
CAGAAGGCAATGGATGCATACGAAACGGCAACGCGCATGAAACTAAATATTCGCATCAAGGCGCCCATTATCATTGTGCCAATAGGCTCACAGGACAGAAATGCCTTGCTGCTCGATTTGGGCTTGCTGGAGTTAACAAATAACACGGTGGAGGTACCGGTGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body
................................................................................AATAGGCTCACAGGACAGAAATGCCT.........................................................2611.0010000001
......................................................................................................................................AACAAATAACACGGTGGAGG.........2011.0010000001
......................................................................................................................................AACAAATAACACGGTGGAGGTA.......2211.0010000001
.AGAAGGCAATGGATGCATACGAAACGGC......................................................................................................................................2811.0010010000
.................................................................................................................CGATTTGGGCTTGCTGGAGT..............................2011.0010000001
................CATACGAAACGGCAACGCGC...............................................................................................................................2011.0010100000
.....................................................................................................................................TAACAAATAACACGGTGGAGGT........2211.0010100000
...................................................................TTATCATTGTGCCAATAGGCTC..........................................................................2211.0010100000
CAGAAGGCAATGGATGCATACGA............................................................................................................................................2311.0010100000
..GAAGGCAATGGATGCATACGAAACGGC......................................................................................................................................2711.0010010000
............GATGCATACGAAACGGCAACGCGC...............................................................................................................................2411.0010000001
..........................................................................................................................................AATAACACGGTGGAGGTACCGGT..2311.0010000001
...............................................................................................................CTCGATTTGGGCTTGCTGGAGTT.............................2311.0010000001
droEre2
CAGAAGGCAATGGATGCCTATGAAACGGCCACGCGTATGAAGCTAAATATCCGCATCAAGGCGCCCATTATCATTGTGCCAATAGGCTCACAGGACAGAAATGCGTTGCTGCTCGATTTGGGTTTGCTGGAGCTAACAAATAACACGGTGGAGTTGGCGGTGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		M060
Embryo		V040
Embryo		V107
Male-body		V108
Head
.......................AACGGCCACGCGTATGAAGCTA......................................................................................................................2211.001000010
..................TATGAAACGGCCACGCGTATGA...........................................................................................................................2211.001000010
...AAGGCAATGGATGCCTATGAAACGGCCA....................................................................................................................................2811.001000010
...................................................................................................................ATTTGGGTTTGCTGGAGC..............................1811.001100000
.............................CACGCGTATGAAGCTAAATATCC...............................................................................................................2311.001000010
........AATGGATGCCTATGAAACGG.......................................................................................................................................2011.001100000
.........................................................................................................................................AAATAACACGGTGGAGTTGGC.....2111.001000010
.............................................................................................GACAGAAATGCGTTGCTGCT..................................................2011.001000010
.................CTATGAAACGGCCACGCGTATGAAG.........................................................................................................................2511.001000010
.......................................................................CATTGTGCCAATAGGCTCACAGGAC...................................................................2511.001010000
.................CTATGAAACGGCCACGCGTATGAAGCT.......................................................................................................................2711.001000010
...................................................................................................................................GCTAACAAATAACACGGTGGAGTTGGC.....2711.001000010
...................................................................................................................ATTTGGGTTTGCTGGAGCT.............................1911.001000100
droEug1
CAGAAAGCTATGGATGCTTACGAAACGGCTACTCGCATGAAACTAAATGTCCGTATTAAGGCGCCGATTATCATCATACCAATTAGCTCCCAGGACTCTAATGCTTTGTCGCTAGATTTGGGTCTGCTGGAATTGACGAACAATACTGTGGAAATGGCGGTGGSizeHit CountTotal NormTotal
No Reads
droBia1
CAGAAGGCAATGGATGCCTACGAAACAGCAACTAGGATGAAGCTAAATATCCGCATCAAGGCGCCCATTATCATCGTGCCTATTAGCTCCGAGGACACCAACGCCCTGTCCCTCGATTTGGGTCTGCTGGAGCTGTCGAACAACACCGTGGAGGTGGCGGTGCSizeHit CountTotal NormTotal
No Reads
droTak1
CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGCATGAAACTGAATGTCCGCATCAAGGCGCCCATTATCATCGTGCCAATAAGCTCCGAGGACACAACCGCTCTATCGCTCGATTTGGGTCTCTTGGAGCTGACGAACAACACGGTGGAGGTGGCGGTGGSizeHit CountTotal NormTotal
No Reads
droEle1
CAGAAGGCACTGGATGCCTACCAAACGGCCACCCGCATGAAGCTGAATGTCCGCATCAAGGCACCCATTATCATTGTGCCAGTTGGCTCAAAGGACTCGAATGCCCTGTCGCTCGACTTGGGTCTGCTGGAGCTGACGAACAACACGGTGGAGGTGGCGGTGGSizeHit CountTotal NormTotal
No Reads
droRho1
CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGCATGAAGCTGAATGTCCGCATTAAGGCCCCTATTATCATCATACCAGTTGGCTCCACGGAATCGAATGCCCTGTCGCTCGATTTGGGTCTGCTGGAGTTGACGAACAACACGGTGGAGGTGGTAGTCGSizeHit CountTotal NormTotal
No Reads
droFic1
CAGAAGGCAATGGATGCCTACGAAACGGCCACGCGCATGAAGCTGAATGTCCGCATTAAGGCGCCCATTATCATTGTGCCAATTGGCTCAAACGACTCGAATGCCCTGTCACTTGATCTGGGTCTGCTGGAGTTGACGAACAACACTGTTGAGGTCGCGGTACSizeHit CountTotal NormTotal
No Reads
droKik1
CAGAAGGCCATGGATGCCTACGAAACGGCCACGCGAATGAAGCTTAATATTCGCATCAAGGCCCCTATTATCATAGTGCCCACTAGTTCTCGGTCCCTGAATGCATTGGCGCTTGACTTGGGACTGCTAGAGTTGACGAACAACACGGTGGAGATAGCGGTGGSizeHit CountTotal NormTotal
No Reads
droAna3
CAGAAGGCATTGGATGCCTATGATACAGCAACTCGTCTCAACCTCAACATACGCATCAAGGCTCCGGTCATCGTGATACCCACTTGCTCGCATTCCAACGATGCACTCTGCCTAGATTTGGGTCTGCTGGAGATCACGAATAACACGGCAGAGATTACAGTGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................ATCACGAATAACACGGCAGA...........2011.001010000
...................................................................................TTGCTCGCATTCCAACGATGCACTCTGC....................................................2811.001010000
...............GCCTATGATACAGCAACTCGT...............................................................................................................................2111.001000010
........................................................................................CGCATTCCAACGATGCACTCTGC....................................................2311.001100000
...............................................................................................................CTAGATTTGGGTCTGCTGGAGATCA...........................2511.001010000
...........................................................................................................................................ATAACACGGCAGAGATTACAG...2111.001000010
.................................................................................................................AGATTTGGGTCTGCTGGA................................1811.001001000
...........................................................................................ATTCCAACGATGCACTCTGC....................................................2011.001001000
......................................................................................................GCACTCTGCCTAGATTTGGGT........................................2111.001000001
droBip1
CAGAAGGCATTGGATGCCTATGAAACGGCCACTCGTCTCAACCTTAATATCCGCATCAAGGCACCTGTCATCGTGATACCCACTTGCTCGGTTTCCAGCGATGCCCTCTGCTTAGATTTGGGTCTGCTGGAGATCACGAATAACACGGCAGAGATTACTGTGCSizeHit CountTotal NormTotal
No Reads
dp5
CAGAAGGCGATGGATGCCTACGAAACGGCGACGCGCATGAAGCTAAATGTGCGGATAAAGGCACCCATCATTATCATACCCATCGACTCCAGGAGCAGGGATGCACTGTCCCTCGATCTGGGCATGCTGGAGCTAACGAACAACACTGTGACTGTCCCAGTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................ATCGACTCCAGGAGCAGGG...............................................................1913.0030200001000
.................................................................................................................CGATCTGGGCATGCTGGAGCT.............................2112.0020110000000
..............................................................................................................................CTGGAGCTAACGAACAACACTGT..............2311.0010010000000
.............................................................................................................CCCTCGATCTGGGCATGCTGGAGCTAAC..........................2811.0010001000000
.......................................................................................................................GGGCATGCTGGAGCTAACGAACA.....................2311.0010000100000
.................CTACGAAACGGCGACGCGC...............................................................................................................................1911.0010100000000
.................................................................................................................CGATCTGGGCATGCTGGAGCTAAC..........................2411.0010010000000
...........................................................................ATACCCATCGACTCCAGGAGCAGGG...............................................................2511.0010100000000
.............................................................................................................CCCTCGATCTGGGCATGCTGGA................................2211.0010000100000
.................................................................................................................CGATCTGGGCATGCTGGAG...............................1911.0010100000000
........................................................................ATCATACCCATCGACTCCAGGAGCAGGG...............................................................2811.0010100000000
droPer2
CAGAAGGCGATGGATGCCTACGAAACGGCGACGCGCATGAAGCTAAATGTGCGGATTAAGGCACCCATCATTATCATACCCATCGACTCCAGGAGCAGGGATGCACTGTCCCTCGATCTCGGCATGCTGGAGCTAACGAACAACACTGTGACTGTCCCAGTGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................CCTCGATCTCGGCATGCT...................................1812.002200000
....................................................................................................ATGCACTGTCCCTCGATCTCGGC........................................2311.001100000
..............................................................................................................................CTGGAGCTAACGAACAACAC.................2011.001100000
..........................................................................CATACCCATCGACTCCAGGAGCAGG................................................................2511.001001000
droWil2
CAAAAGGCTATGGATGCCTATGAAACGGCCACGCGGATGAAACTTAATGTGCGTATTAATGCTCCCATAATCATCATTCCAGTGGACTCGAAGAGCTGTAACGCATTGTCCTTGGACTTGGGTATGCTGGAATTGACAAATAATACCATTGAGGTTCCAGTACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................TATGAAACGGCCACGCGGATGAAAC........................................................................................................................2512.00202000
................................................................................................TGTAACGCATTGTCCTTGGACTTGGGTA.......................................2811.00101000
................................................................................................TGTAACGCATTGTCCTTGGACTTGGG.........................................2611.00101000
...........................................................................ATTCCAGTGGACTCGAAG......................................................................1811.00100010
..........................GGCCACGCGGATGAAACTTAATGTGC...............................................................................................................2611.00100100
......................................................................TCATCATTCCAGTGGACTCGAAGAGC...................................................................2611.00101000
................................................................................AGTGGACTCGAAGAGCTGTAACGCA..........................................................2511.00110000
.....................................................................................................................TTGGGTATGCTGGAATTGACAAAT......................2411.00100001
...................................................................TAATCATCATTCCAGTGGACTCGAAG......................................................................2611.00101000
......................................................................TCATCATTCCAGTGGACTCGAAGAGCTG.................................................................2811.00101000
....................................................................................GACTCGAAGAGCTGTAACGCATTGTCCTT..................................................2911.00100100
..........TGGATGCCTATGAAACGGCCACGCGGA..............................................................................................................................2711.00101000
........................................................................ATCATTCCAGTGGACTCGAAGAGCT..................................................................2511.00100100
.......................................................................................................CATTGTCCTTGGACTTGGGTATGCTGG.................................2711.00100100
..........................................................................................................TGTCCTTGGACTTGGGTATGCTGGAAT..............................2711.00101000
.....................................................................ATCATCATTCCAGTGGACT...........................................................................1911.00110000
....................................................................AATCATCATTCCAGTGGACTCGAAG......................................................................2511.00101000
........................................................................................CGAAGAGCTGTAACGCATTGTCCTTGGA...............................................2811.00110000
.........................................................................................................TTGTCCTTGGACTTGGGTATGC....................................2220.50100001
droVir3
CAAAATGCAATCGATGCCTATGAAAAGGCGACGCGCATTAAGCTAAATGTGCGCATCAAGGCGCCTATTATATGCGTACCTGTTGACTCGCAAAGCAAAAATGCGCTGGCCATTGACTTCGGCTTGCTGGAGATAACAAACAACACCAGTGAGGTGACAGTAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
...........................................................................GTACCTGTTGACTCGCAAAGC...................................................................2112.00200000000000000000000000000000100000010000000000000000000000000
.................................................................................................AAAATGCGCTGGCCATTGACTTCGGC........................................2612.00202000000000000000000000000000000000000000000000000000000000000
...............................................................................................................ATTGACTTCGGCTTGCTGGAG...............................2112.00200000000000000000000000000000000000000000000000000000000000101
..................TATGAAAAGGCGACGCGC...............................................................................................................................1812.00200000000200000000000000000000000000000000000000000000000000000
.......................................AAGCTAAATGTGCGCATCAAGGC.....................................................................................................2311.00100000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................CAAACAACACCAGTGAGGT........1911.00100000000000000000000001000000000000000000000000000000000000000
........................................................................................CGCAAAGCAAAAATGCGCT........................................................1911.00100000000000000000000000000001000000000000000000000000000000000
.....................................................CATCAAGGCGCCTATTATATGCG.......................................................................................2311.00100100000000000000000000000000000000000000000000000000000000000
..................................GCATTAAGCTAAATGTGCGCATCAAG.......................................................................................................2611.00100100000000000000000000000000000000000000000000000000000000000
.............................................................................................AGCAAAAATGCGCTGGCCATTGACT.............................................2511.00100100000000000000000000000000000000000000000000000000000000000
..............................................................................................................CATTGACTTCGGCTTGCTGGAG...............................2211.00100100000000000000000000000000000000000000000000000000000000000
........................................................................TGCGTACCTGTTGACTCGCA.......................................................................2011.00100000000000000000000000000000001000000000000000000000000000000
..................................................................ATTATATGCGTACCTGTTGACTC..........................................................................2311.00100000000000000000000000000000000000000000000000000000000000001
......................................TAAGCTAAATGTGCGCATCAAGGC.....................................................................................................2411.00100000000000000000000000000000000000000000000000000000000000001
....................................ATTAAGCTAAATGTGCGCATCAAGGC.....................................................................................................2611.00100000000000000000000000000000001000000000000000000000000000000
.......................................................................ATGCGTACCTGTTGACTCGCA.......................................................................2111.00100000000000000000000001000000000000000000000000000000000000000
........................AAGGCGACGCGCATTAAGCTAAATGTGC...............................................................................................................2811.00100000000000000000100000000000000000000000000000000000000000000
........AATCGATGCCTATGAAAAGGCGACGCGC...............................................................................................................................2811.00100010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TGGAGATAACAAACAACACCAGTGA...........2511.00100100000000000000000000000000000000000000000000000000000000000
.................................................................................GTTGACTCGCAAAGCAAAAATGCGCTG.......................................................2711.00100000000000000000000010000000000000000000000000000000000000000
.................................................................TATTATATGCGTACCTGTTGACTC..........................................................................2411.00100010000000000000000000000000000000000000000000000000000000000
...AATGCAATCGATGCCTATGAAAAGG.......................................................................................................................................2511.00100100000000000000000000000000000000000000000000000000000000000
..............................................................GCCTATTATATGCGTACCTGTTGACT...........................................................................2611.00100000000000000000000010000000000000000000000000000000000000000
.............................................................................................AGCAAAAATGCGCTGGCCATTGA...............................................2311.00100100000000000000000000000000000000000000000000000000000000000
..................................GCATTAAGCTAAATGTGCGC.............................................................................................................2011.00100000000000000000000000000000100000000000000000000000000000000
.........................................................................................GCAAAGCAAAAATGCGCTG.......................................................1911.00100100000000000000000000000000000000000000000000000000000000000
droMoj3
CAAAACGCCATCAATGCCTACGAAAAGGCAACGCGCATGAAACTGAATATTAGAATTAAAGCGCCTGTTATACTGGTGCCGGTGGATTCACAAAGCACAGATGCATTGGCCATTGATTTGGGCTTGCTGGAGATGACAAATACAACTATCGAGACGCCAGTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		V060
Head		V110
Male-body
...........................................................................................................GGCCATTGATTTGGGCTTGCTGG.................................2311.001000001
..................................................................................................................GATTTGGGCTTGCTGGAGATG............................2111.001100000
........CATCAATGCCTACGAAAAG........................................................................................................................................1911.001100000
..................................................................................................................GATTTGGGCTTGCTGGAGATGA...........................2211.001000001
...................................................................................................................................GATGACAAATACAACTATCGAG..........2211.001100000
.......................................................................................................CATTGGCCATTGATTTGGGC........................................2011.001100000
......................................................................................................................................GACAAATACAACTATCGAGACGCC.....2411.001000001
................................................................................................................................GGAGATGACAAATACAACTAT..............2111.001100000
droGri2
CAGGCCACATTGGAGGCATATGAGAAAGCGACACGCATGAAGCTAAATGTGCGCATCAAGGCGCCCATTATAGTTGTGCCTGTGGATTCGCAGAGCAGAAATGCTCTGGCCATTGATTTGGGTTTGCTGGAGATGACAAACAACACCAGTGAGCTGTCAGTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 07/30/2014 at 06:09 PM