ID:

dme_318

 Coordinate:

chr2R:17814120-17814169 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend:maturestarmismatch in alignmentmismatch in read

Predicted structure

-18.8 -18.5

Flybase annnotation

unknown

Sense Strand Reads

GCACACAAAGTCAATATTAATATTCACTTAGTCGGGGGAAATGGTCGTCAGGGGGCGGTGGGCGGTGGGCGGGGCACGCTGACTGACAATGGCCAGGGAAAAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
**************************************************...(((.((...((((.((((.....)))).))))...)).)))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V085
CME W2 wing disc		 V135
CME W2 (wing disc line)		 V026
1182-4H cell		 V147
1182-4H cell		 V009
CMEL1		 V126
CME L1 		V028
CMEW1 Cl.8+ cell		 V033
CMEW1 Cl.8+ cell		 V091
fGS/OSS total  		 V127
G2		 V019
GM2 cell		 V031
GM2 cell		 V018
Kc167 cell		 V024
kc167 cell		 V073
mbn2 		V148
mbn2 		V075
ML-DmBG1-C1		 V129
ML-DmBG1-c1		 V076
ML-DmBG3-C2		 V130
ML-DmBG3-c2 		V034
ML-DmD16c3 cell		 V131
ML-DmD16-c3 		V021
ML-DmD21 cell		 V010
MLDmD20c5		 V036
ML-DmD20c5 cell		 V027
ML-DmD21 cell		 M005
ML-DmD32 cell		 M006
ML-DmD32 		V022
ML-DmD32 cell		 V035
ML-DmD32 cell		 V132
ML-DmD32 		V030
ML-DmD8 cell		 V134
ML-DmD8 		V029
ML-DmD9 cell		 V125
ML-DmD9		 M029
OSC cells (nuclear)		 M030
OSC cells (cytoplasmic)		 M031
OSC cells (whole cell)		 V144
OSC		 OSS2
OSS_s2		 OSS6
OSS_s6		 OSS7
OSS_s7		 OSS8
OSS_s8		 V032
S1 cell		 V146
S1 cell		 V008
S2-DRSC		 V145
S2-DRSC		 V067
S2-NP		 V020
S2R+ cell		 V025
S2R+ cell		 V074
S3		 V128
S3 		V011
Sg4		 V133
Sg4 		T004
OSC-4N		 T005
89-4N
.........................................................GTGGGCGGTGGGCGGGGC........................................................................... 18 0 5 5.20 26 2 1 0 0 1 1 0 0 0 3 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 1 2 2 0 0 3 0 0 1 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TGGCACGCGGACTGACAAGGGC......................................................... 22 3 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GTGCACGCTGACTGAAAAGGGC......................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................CCTTAGTAGGGGGAGATGGTC........................................................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AGTCGGGTGAATTGGTCGTCA.................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................ATGGTCGTCAGGGGACAGTGG......................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGGCGGCGCACGGTGACGGAC............................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AAGATGCGCCGAACAACGTG........ 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TGGACGGGGAAAAGACAAATGC....................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TGGCACGAGGACTGACAATGGC......................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GGGGACGCGGACTGACTATGG.......................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................AGCCGCGGGCGGGGCACGCTG..................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGACGGTGGGCGGGGCAC......................................................................... 19 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TGGCCGGGGAAAAGGTAAGTGC....................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GGGGAACTGGTCTTGAGGGGG............................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................AAGAAGCGACGAACAACGTGA....... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GCTCGCTGACTGACAATCACC........................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GGGCACGTGGACTGATAATGG.......................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................AATGCGACGATAAACTTAAGA..... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GGGCGGGGGACGCTGACTGGG............................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATGCCAAGGAAATTGAAAATA...................... 21 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................ACTTAGATGGGGGAAATGG.......................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGAATAAAGTGAGATGCT. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................AATGGTCGTCAAAGGGCGG............................................................................................ 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AAATGGTCGTAAGTGGGCGG............................................................................................ 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTGGGCGGTGGGCGGGGCAA......................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTGGGCGGTCGGCGGGGC........................................................................... 18 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................ACACTGGACAGGGAAGAGGCA............................................ 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................ATGGATGTAAGGGGGCGGTGG......................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GGGCGGGCTAACTGACAATGG.......................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................GTGGGCGGTGGGCGGGTCA.......................................................................... 19 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGGCGGAGCACGCAGACTT................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTGGGCGGTGGGCGGGGCT.......................................................................... 19 1 12 0.17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGGCGGAGGGCGGAGTACGC....................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TGAGAATGCGACGAGAAA............ 18 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TCAGGCGGCGATGGGCGGGGG.................................................................................. 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGGCGGATGCCAAGCTAATTG............................ 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AGGGTAAAGGCAAATGCGTAG................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................GTCGGCAGGCCGCGGTGGGCG...................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................GGCGGTGGGAGCGGCACCCTG..................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GTAAATGCGAAGCAGATTGAA.......................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GCCAGGGGGCGGTGGACGG..................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GGCGGTGGAGGGGGCACTCTG..................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GAAACGGCGACGAAAAAGGTG........ 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTGGGCGGCGGGCGGGGC........................................................................... 18 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................GGGGCGCGGGGCACGCTG..................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TCGGCTGGGGACGGTGGGCGG..................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AGGGGGAAATGGTTGTCTGGG................................................................................................. 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................TGGGCGTAGGGCGGGGCAAGC....................................................................... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGGGGCGGTGGGCGGTGGGAG............................................................................... 21 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGCGATGACAAACGTGGGAT.... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GGGGCTGTGGGCGGTTTGCGG.............................................................................. 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................GGCGGTGGGAGGGGCACCCCG..................................................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGGACGGGGCGCGCTGACC.................................................................. 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CAAATGGTCGGCAGGGGGAGG............................................................................................ 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CGCGGTGGGCGGTGGGGGGG............................................................................. 20 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GGGGGTAATGGTCGAGAGGG................................................................................................. 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GCCAGGGGAAAGACAAACGC....................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GTAAGGGGGCGGTGGGGGCTG................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TAATCGAACATGCGACGAAA.............. 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCGACGAAACATCTGAGAT.... 19 3 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GGCGGTGGGCGGGACACGAGG..................................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................GGCGGGGGGCGGTGCTCGCTG..................................................................... 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CAGGCAGCGGTGGGCGATGGG................................................................................. 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GGGGGCGGCGGGCGGGGGGCG............................................................................... 21 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GGCCGTCAGGGAGAGGTGG......................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGGGGCGGTGGGGGGCGCGCG............................................................................... 21 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCGACGAAACACGTGAGGAG... 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GGCCGTCAGGGAGCGGAGG......................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................TGGGCGGAGGGCGGGGAA.......................................................................... 18 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGGCGGGGGGCGGGTCA.......................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GGGGCGGTGGGCTGTGGCGGG.............................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGGGGGGGTTGGGCGGTGGG................................................................................. 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGCGGTGGGAGGTGGGCGCGC............................................................................ 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTGGGCGGTCGGCGGGTTA.......................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGGCGGTGGACGGGTCAGG........................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GGGGCGGCGGGCGGTGCGGGG.............................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCACACAAAGTCAATATTAATATTCACTTAGTCGGGGGAAATGGTCGTCAGGGGGCGGTGGGCGGTGGGCGGGGCACGCTGACTGACAATGGCCAGGGAAAAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
**************************************************...(((.((...((((.((((.....)))).))))...)).)))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V085
CME W2 wing disc		 V135
CME W2 (wing disc line)		 V026
1182-4H cell		 V147
1182-4H cell		 V009
CMEL1		 V126
CME L1 		V028
CMEW1 Cl.8+ cell		 V033
CMEW1 Cl.8+ cell		 V091
fGS/OSS total  		 V127
G2		 V019
GM2 cell		 V031
GM2 cell		 V018
Kc167 cell		 V024
kc167 cell		 V073
mbn2 		V148
mbn2 		V075
ML-DmBG1-C1		 V129
ML-DmBG1-c1		 V076
ML-DmBG3-C2		 V130
ML-DmBG3-c2 		V034
ML-DmD16c3 cell		 V131
ML-DmD16-c3 		V021
ML-DmD21 cell		 V010
MLDmD20c5		 V036
ML-DmD20c5 cell		 V027
ML-DmD21 cell		 M005
ML-DmD32 cell		 M006
ML-DmD32 		V022
ML-DmD32 cell		 V035
ML-DmD32 cell		 V132
ML-DmD32 		V030
ML-DmD8 cell		 V134
ML-DmD8 		V029
ML-DmD9 cell		 V125
ML-DmD9		 M029
OSC cells (nuclear)		 M030
OSC cells (cytoplasmic)		 M031
OSC cells (whole cell)		 V144
OSC		 OSS2
OSS_s2		 OSS6
OSS_s6		 OSS7
OSS_s7		 OSS8
OSS_s8		 V032
S1 cell		 V146
S1 cell		 V008
S2-DRSC		 V145
S2-DRSC		 V067
S2-NP		 V020
S2R+ cell		 V025
S2R+ cell		 V074
S3		 V128
S3 		V011
Sg4		 V133
Sg4 		T004
OSC-4N		 T005
89-4N
.............................................TGTCAAGGGGCGGTGGGCGGTG................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................GGGGCGGTTGGCGGCGCACGC....................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TCACACAAAGGGAATATTAAT................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GGGGGAAATGGTCTTCAGAGC................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AAAGGCTAATGCCAACCATAT.............................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................GAAAATGCGACTAAAAACCGG........ 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AGGCTAATTGAAAAGGCGACG................. 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGGGGCAATGGTCGTAAGGGG................................................................................................ 21 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GACGAAAAACGCGAGATAATG 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGCCAAAGCCAAGGAAATTGAA.......................... 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GGTCGTCAGTGCGCGGAGGG........................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................CTGCCAATGGCCAGCGAAACG............................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................CGTAAGGGGGCGGTGGTGGGTG................................................................................... 22 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTGCGCCGTGGGCGGGGCAAG........................................................................ 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGGGGGCGCTGGTCGGTGGGG................................................................................ 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CGGGCATGCTGACGGACAAT............................................................ 20 3 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GACAAGGCGAATGCCATGCAA................................ 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................GGGGTGATGGGCGTCAGGG................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate miRBase ID Alignment
dm3 chr2R:17814070-17814219 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGG--------------GG---------------------------------------GAAATGGTCGTC-A-------------GGGGGCG-------------------------------------------------------------------------------------------------GTGG-G--------CGGTGGGCGGGGCAC---GCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
droSim3 2R:16450004-16450146 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGG--------------GG---------------------------------------GAAATGGTCGTC-A-------------GGG---------------------------------------------------------------------------------------------------------GG--------CGGTGGGCGGGGCAC---GCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GAAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
droSec2 scaffold_9:1129232-1129374 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGG--------------GG---------------------------------------GAAATGGTCGTC-A-------------GGG---------------------------------------------------------------------------------------------------------GG--------CGGTGGGCGGGGCAC---GCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
droYak3 2R:11369280-11369440 + G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTGGG--------------GG------------------G--------------------CAAATGGGCGTC-G-------------GGGGGCG----TCGGACG--------------------------------------------------------------------------------------GTGG-G--------CGGTGGGCGGGGCACTGTGGTGACTGACAATAGCCTG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGAGGAAAAACGTGAGTCGTTG
droEre2 scaffold_4845:11948627-11948775 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTGGG--------------G----------------------------------------GAAATGGGCGTC-A-------------GGGGGCG-------------------------------------------------------------------------------------------------GTGG-G--------CGGTGGGCGGGGCAC---TGAGACTGACAATGGCCTG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGTTGCTG
droEug1 scf7180000409672:7657944-7658082 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGG--------------GT------------------GG-------------------CAAAAGGGCGTCGA-------------GGG------------------------------------------------------------------------------------------------------------------------GGCGGGGCAC---TCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGCTGCCG
droBia1 scf7180000301754:4931125-4931255 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGT--------------G----------------------------------------GAGAGAGGCGTC-----------------------------------------------------------------------------------------------------------------------------------------GGGCGGGGCAA---TCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAA-AACGTGAGATGCCG
droTak1 scf7180000415681:411564-411707 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGG--------------GG------------------GC-------------------GAATAGGGCGTC-G-------------G-G---------------------------------------------------------------------------------------------------------GG--------CGAGGGGCGCGGCAA---GCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCCG
droEle1 scf7180000491211:178317-178452 - G------CTCAC--------------AAAGTCAATATTAATATTCACTTAGTCGG--------------TG---------------------------------------GAAAGGGGCGAT--------------------------------------------------------------------------------------------------------------------------------------GAGGGGCGGGGCAA---TCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCCG
droRho1 scf7180000779173:2879-3013 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCAG--------------G----------------------------------------GAAAAGGGCGGC--------------------------------------------------------------------------------------------------------------------------------------GAGGGGAGCGGCAC---TCCGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
droFic1 scf7180000453858:231743-231888 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGG--------------G----------------------------------------GAAAAGGACGTCGA-------------GGG---------------------------------------------------------------------------------------------------------AGCGAGGGGGC-----GAGGGGCTT---TCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------GGAA--------AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCCG
droKik1 scf7180000302366:125760-125924 + GCGAGAGCACAC--------------AAAGTCAATATTAATATTCACTTAGGTGGCAG-----------------------------------------------------------------------TGGCAGGAGGG---GTAAGTCCG-GG-------GTGGGG-------CTAG---------------------------------------G----------------------------------------GGGTGGCACTC---TCTGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------CAAAAAAA----AAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCCG
droAna3 scaffold_13266:11189510-11189697 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTTGGTAGCCGGGGTCTGGGGAGGGTC---TGCGGAAGGTCTAA-------------------------------GGAGGGCCTG---------------------------GTGGGGGCAGGGGATTC---------------------------------------GTG-----GAAGGGGCAGGGTGT---------------------------------CCGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------AGTG--------CAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
droBip1 scf7180000396547:1280586-1280765 + G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTTGGTAGCCGGGGTCTGGGGAGGGACGGCGGCGGAAGGTCTGG-------------------------------GAAGGGTC--------------------------------------GGGGATTC---------------------------------------GTG-----GCAGGGGCAGGGTAG---------------------------------CCGACTGACAATGGCCAG---------------------------------------------------------------------------------------------------------------------AGTG--------CAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCTG
dp5 3:15374713-15374945 - G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGT--------------G----------------------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACTGACAATGGCCAGAACGAGGGGCGGAACGAGGGGCGGAACGGGGGGCAGAACGAGGGGCAGAGGCACAGAGGCAGAACCAGAAGCAGTCATGGAGCCCAGAGCCAGAGCCAGAGCAGGAGCTACAACTGTGGAAAAACCAGGCAGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCCG
droPer2 scaffold_4:3675776-3675975 + G------CACAC--------------AAAGTCAATATTAATATTCACTTAGTCGT--------------G----------------------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACTGACAATGGCCAGAACGAGGG------------------------GCAGAACGAGGGGCAGAGTC--AGAGGCAGAACCAGAAGCAGTCATGGA-------GCCAGAGCCAGAGCAGGAGCTACAACTGTGGAAAAACCAGGCGGGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGATGCCG
droWil2 scf2_1100000004514:3157395-3157557 - G------AAAGCGAAAGAATGAGCAGAAAGTCAATATTAATATTCACTTAGATAT------------GGGG---------------------------------------GAGATATTGACT-AGGGAATGACAA---------------------------GTGAGG-------CTAG---------------------------------------GTG--GAG-------------------GG----GGAGT----GATGTGCCCC---ACAGACTGACAATGGCCA------------------------------------------------------------------------------------------------------------------------------------GGCAAATGCCAAGCAAATTGAAAATGCGACAACAA-------------
droVir3 scaffold_12875:10399632-10399783 - G------CAAAC--------AGGCAAAAAGTCAATATTAATATTCACTTAGCAAG--------------GG------------------TCTAACGGCTGGATGGGCGTGGAGA-----------------------GGG---G-------------------------------------------------------------------------------------------------GAGG-G--------CCATGAGTGGGATAT---G----CTGACAATGGCCA------------------------------------------------------------------------------------------------------------------------------------GGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGACGC--
droMoj3 scaffold_6496:16565687-16565877 + G------CAAAC--------AGGCAAAAAGTCAATATTAATATTCACTTAGCAAA--------------GG------------------TCCAA-----------------------------------------------------------CAGTGCAGGGCAGGG-------CGAGAGGGAGCGAGAGGAAGCGAGAGGGAGAGGGAGGCGCACCAGAGC------------------AGGG-G--------CAATGGGTGGGATAT---G----CTGACAATGGCCA------------------------------------------------------------------------------------------------------------------------------------GGCAAATGCCAAGCAAATTGAAAATGCGACGAAAAACGTGAGACGC--

Generated: 02/13/2013 at 10:50 PM