| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:642193-642303 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_simulans | chr3L:290535-290645 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_yakuba | chr3L:629639-629749 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_eugracilis | scf7180000409184:669315-669425 + | CTTGTAA-------------------------CTTCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATGCCACA--------------------------------------T--------TCC |
| D_elegans | scf7180000491249:790166-790276 + | TTTGTTA-------------------------CTTCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_ananassae | scaffold_13337:6520579-6520690 - | TTTGTAA--------------A----------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_pseudoobscura | chrXR_group8:4603895-4604015 - | TTTGGGAC-------T-----ACTCCACCAATA---TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_persimilis | super_29:844606-844726 - | TTTGGGAC-------T-----ACTCCACCAATA---TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_willistoni | scaffold_180698:10172097-10172254 + | TTTTTTTCATACATTT----------------TTTTGATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTT--------GCC |
| D_virilis | scaffold_13049:5805300-5805416 + | TTTGTGTG-------T-----CGTCT----ATC---TCTGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTATTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_grimshawi | scaffold_15110:13265206-13265333 - | TGTGCGTC-------TCTCTGTCTCCATCACTA-CCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAG-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| Caenorhabditis_elegans_1 | cel-mir-81:1-108 + | ATCAGTGC-------------------------CATCGTG-----C-CCAACAGTCGGTTTTCACCGTGATCTGA-------GAGCAATCCAA-----AAATGCTTTTCTGAGATCATCGTGAAAGCTAGTTGTT---------GGTC----------------------------------------TACGGGCTTTTG |
| Caenorhabditis_elegans_2 | cel-mir-82:1-97 + | GAAATAG----------------------------------GTTCTTTTAGCAACCGGTTTTCTCTGTGATCTACAGAATGACAGCTAAT---------CGT------CTGAGATCATCGTGAAAGCCAGTTGTTTTTATGAACTC------------------------------------------------------ |
| Caenorhabditis_briggsae_2 | cbr-mir-81:1-90 + | CGTGAT------------------------------------------TAACGGTCGGTTTTCACCTTGATCTGA-------GAGCAATA----ACCAGAATGCTTATCTGAGATCATCGTGAAAGCTAGTTGTT---------ACTT----------------------------------------C--------ACT |
| Caenorhabditis_briggsae_1 | cbr-mir-82:1-95 + | AAGTT---------------------------------------CTTCTAGCGACAGGTTTTCGCCGTGATCTGC-------A-GAGTTCCATGAA--GAAA--ACATCTGAGATCATCGTGAAAGCCAGTTGCTTAAGAGGACTC------------------------------------------------------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18472019-18472126 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTAATTACA-CATCA-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTT- |
| D_simulans | chr2L:18160930-18161037 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTAATTACA-CATCA-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTT- |
| D_yakuba | chr2R:4988819-4988926 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTAATTACA-CATCA-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTT- |
| D_ananassae | scaffold_12916:2379166-2379273 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GCAACTAAG-AATCG-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCATTT- |
| D_eugracilis | scf7180000409447:414649-414756 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTAACTACA-AATCA-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAGCCGCAATT- |
| D_elegans | scf7180000491338:2439478-2439585 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTAACTACT-AATCA-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATT- |
| D_pseudoobscura | chr4_group3:3635640-3635746 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTACT--TCAGATCG-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCATTT- |
| D_persimilis | super_1:5116219-5116325 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTACT--TCAGATCG-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCATTT- |
| D_willistoni | scaffold_180708:11623134-11623240 + | AAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTAATTATTCAATCA-------------TACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCACA---- |
| D_virilis | scaffold_12963:18451337-18451441 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTATTTATA-GAGCA-------------TACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA---- |
| D_grimshawi | scaffold_3792:132-239 + | -AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTA------GTATCTATC-TAGCA-------------TACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCATAG- |
| Caenorhabditis_briggsae | cbr-let-7:1-87 + | --------------ACTGGGGTACGGTGAGGTAGTAGGTTGTATAGTT--------TAGAATATTACTC-------TCGGTGAACTATGCAAGTTTCTACCTCACCGAATACCAGG-------------- |
| Caenorhabditis_elegans | cel-let-7:1-99 + | ----------TACACTGTGGATCCGGTGAGGTAGTAGGTTGTATAGTT--------TGGAATATTACCA-------CCGGTGAACTATGCAATTTTCTACCTTACC------GGAGACAGAACTCTTCGA |
| Mus_musculus | mmu-let-7i:1-85 + | ---------------------CTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCC--GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG---------------------- |
| Rattus_norvegicus | rno-let-7i:1-85 + | ---------------------CTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCC--GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG---------------------- |
| Macaca_mulatta | mml-let-7i:1-85 + | ---------------------CTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCC--GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG---------------------- |
| Gorilla_gorilla | ggo-let-7i:1-108 + | ------CCCGACACCATGGCCCTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCC--GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAGTGCTGGTG-------------- |
| Pongo_pygmaeus | ppy-let-7i:1-84 + | ---------------------CTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCC--GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTA----------------------- |
| Homo_sapiens | hsa-let-7i:1-84 + | ---------------------CTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCC--GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTA----------------------- |
| Mus_musculus | mmu-let-7e:1-93 + | ------------CGCGCCCCCCGGGCTGAGGTAGGAGGTTGTATAGTT--------GAGGAAGACACCC-----GAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGCGCC------------ |
| Rattus_norvegicus | rno-let-7e:1-93 + | ------------CGCGCCCCCCGGGCTGAGGTAGGAGGTTGTATAGTT--------GAGGAAGACACCC-----GAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGCGCC------------ |
| Macaca_mulatta | mml-let-7e:1-79 + | -------------------CCCGGGCTGAGGTAGGAGGTTGTATAGTT--------GAGGAGGACACCC-----AAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG------------------- |
| Gorilla_gorilla | ggo-let-7e:1-109 + | ------ACCTGCCGCGCCCCCCGGGCTGAGGTAGGAGGTTGTATAGTT--------GAGGAGGACACCC-----AAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGCGCCCTGCACGGGA-- |
| Pongo_pygmaeus | ppy-let-7e:1-79 + | -------------------CCCGGGCTGAGGTAGGAGGTTGTATAGTT--------GAGGAGGACACCC-----AAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG------------------- |
| Homo_sapiens | hsa-let-7e:1-79 + | -------------------CCCGGGCTGAGGTAGGAGGTTGTATAGTT--------GAGGAGGACACCC-----AAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG------------------- |
| Mus_musculus | mmu-let-7c-1:1-94 + | -----------TGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTT--------TAGAGTTACACCC-----TGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACT------------ |
| Rattus_norvegicus | rno-let-7c-1:1-94 + | -----------TGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTT--------TAGAGTTACACCC-----TGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACT------------ |
| Macaca_mulatta | mml-let-7c:1-84 + | ----------------GCATCCGGGTTGAGGTAGTAGGTTGTATGGTT--------TAGAGTTACACCC-----TGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGC----------------- |
| Gorilla_gorilla | ggo-let-7c:1-108 + | GAAG------CTGTGTGCATCCGGGTTGAGGTAGTAGGTTGTATGGTT--------TAGAGTTACACCC-----TGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCACACTTGAGCCATC--- |
| Pongo_pygmaeus | ppy-let-7c:1-84 + | ----------------GCATCCGGGTTGAGGTAGTAGGTTGTATGGTT--------TAGAGTTACACCC-----TGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGC----------------- |
| Homo_sapiens | hsa-let-7c:1-84 + | ----------------GCATCCGGGTTGAGGTAGTAGGTTGTATGGTT--------TAGAGTTACACCC-----TGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGC----------------- |
| Rattus_norvegicus | rno-let-7a-2:1-96 + | ----------CGGCATGCTCCCAGGCTGAGGTAGTAGGTTGTATAGTT--------TAGAGTTACAACA-----AGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTTGCAC----------- |
| Macaca_mulatta | mml-let-7a-2:1-72 + | ----------------------AGGCTGAGGTAGTAGGTTGTATAGTT--------TAGAATTACATCA-----AGGGAGATAACTGTACAGCCTCCTAGCTTTCCT----------------------- |
| Mus_musculus | mmu-let-7a-2:1-96 + | ----------CTGCATGTTCCCAGGTTGAGGTAGTAGGTTGTATAGTT--------TAGAGTTACATCA-----AGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTTGCAC----------- |
| Pongo_pygmaeus | ppy-let-7a-2:1-72 + | ----------------------AGGTTGAGGTAGTAGGTTGTATAGTT--------TAGAATTACATCA-----AGGGAGATAACTGTACAGCCTCCTAGCTTTCCT----------------------- |
| Homo_sapiens | hsa-let-7a-2:1-72 + | ----------------------AGGTTGAGGTAGTAGGTTGTATAGTT--------TAGAATTACATCA-----AGGGAGATAACTGTACAGCCTCCTAGCTTTCCT----------------------- |
| Mus_musculus | mmu-let-7f-1:1-89 + | -------------------ATCAGAGTGAGGTAGTAGATTGTATAGTT-GTGGGGTAGTGATTTTACCC-TGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG-------------------- |
| Rattus_norvegicus | rno-let-7f-1:1-89 + | -------------------ATCAGAGTGAGGTAGTAGATTGTATAGTT-GTGGGGTAGTGATTTTACCC-TGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG-------------------- |
| Macaca_mulatta | mml-let-7f-1:1-87 + | --------------------TCAGAGTGAGGTAGTAGATTGTATAGTT-GTGGGGTAGTGATTTTACCC-TGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA--------------------- |
| Gorilla_gorilla | ggo-let-7f:1-110 + | AAAACA------TTGCTCTATCAGAGTGAGGTAGTAGATTGTATAGTT-GTGGGGTAGTGATTTTACCC-TGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGAGGAGTAGAC------------ |
| Pongo_pygmaeus | ppy-let-7f-1:1-87 + | --------------------TCAGAGTGAGGTAGTAGATTGTATAGTT-GTGGGGTAGTGATTTTACCC-TGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA--------------------- |
| Homo_sapiens | hsa-let-7f-1:1-87 + | --------------------TCAGAGTGAGGTAGTAGATTGTATAGTT-GTGGGGTAGTGATTTTACCC-TGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA--------------------- |
| Rattus_norvegicus | rno-let-7b:1-85 + | --------------------GCGGGGTGAGGTAGTAGGTTGTGTGGTT-TCAGGGCAGTGATGTCGCCC---CTCCGAAGATAACTATACAACCTACTGCCTTCCCTGA--------------------- |
| Mus_musculus | mmu-let-7b:1-85 + | --------------------GCAGGGTGAGGTAGTAGGTTGTGTGGTT-TCAGGGCAGTGATGTTGCCC---CTCCGAAGATAACTATACAACCTACTGCCTTCCCTGA--------------------- |
| Macaca_mulatta | mml-let-7b:1-83 + | ---------------------CGGGGTGAGGTAGTAGGTTGTGTGGTT-TCAGGGCAGTGATGTTGCCC---CTCAGAAGATAACTATACAACCTACTGCCTTCCCTG---------------------- |
| Gorilla_gorilla | ggo-let-7b:1-109 + | -CAAGGCCGGGC-----CTGGCGGGGTGAGGTAGTAGGTTGTGTGGTT-TCAGGGCAGTGATGTTGCCC---CTCAGAAGATAACTATACAACCTACTGCCTTCCCTGAGGAGCCCAGT----------- |
| Pongo_pygmaeus | ppy-let-7b:1-83 + | ---------------------CGGGGTGAGGTAGTAGGTTGTGTGGTT-TCAGGGCAGTGATGTTGCCC---CTCAGAAGATAACTATACAACCTACTGCCTTCCCTG---------------------- |
| Homo_sapiens | hsa-let-7b:1-83 + | ---------------------CGGGGTGAGGTAGTAGGTTGTGTGGTT-TCAGGGCAGTGATGTTGCCC---CTCGGAAGATAACTATACAACCTACTGCCTTCCCTG---------------------- |
| Mus_musculus | mmu-let-7g:1-88 + | --------------------CCAGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCC-GGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCAGG--------------------- |
| Macaca_mulatta | mml-let-7g:1-84 + | ----------------------AGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCC-GGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA----------------------- |
| Gorilla_gorilla | ggo-let-7g:1-111 + | ------CCTTTTGCCTGATTCCAGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCC-GGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCAGGAACAGCGCG------------ |
| Pongo_pygmaeus | ppy-let-7g:1-84 + | ----------------------AGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCC-GGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA----------------------- |
| Homo_sapiens | hsa-let-7g:1-84 + | ----------------------AGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCC-GGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA----------------------- |
| Mus_musculus | mmu-let-7d:1-103 + | AATGGG-----------TTCCTAGGAAGAGGTAGTAGGTTGCATAGTT-TTAGGGCAGAGATTTTGCCC---ACAAGGAGTTAACTATACGACCTGCTGCCTTTCTTAGGGCCTTATT------------ |
| Rattus_norvegicus | rno-let-7d:1-98 + | -------------TGGGCTCCTAGGAAGAGGTAGTAGGTTGCATAGTT-TTAGGGCAGAGATTTTGCCC---ACAAGGAGTTAACTATACGACCTGCTGCCTTTCTTAGGGCCTT--------------- |
| Macaca_mulatta | mml-let-7d:1-87 + | -------------------CCTAGGAAGAGGTAGTAGGTTGCATAGTT-TTAGGGCAGGGATTTTGCCC---ACAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG-------------------- |
| Pongo_pygmaeus | ppy-let-7d:1-87 + | -------------------CCTAGGAAGAGGTAGTAGGTTGCATAGTT-TTAGGGCAGGGATTTTGCCC---ACAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG-------------------- |
| Homo_sapiens | hsa-let-7d:1-87 + | -------------------CCTAGGAAGAGGTAGTAGGTTGCATAGTT-TTAGGGCAGGGATTTTGCCC---ACAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG-------------------- |
| Mus_musculus | mmu-let-7c-2:1-95 + | -------------ACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTT--------TTGGGCTCTGCCC--CGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGCCGC------------ |
| Rattus_norvegicus | rno-let-7c-2:1-95 + | -------------ACGGCCTTTGGGGTGAGGTAGTAGGTTGTATGGTT--------TTGGGCTCTGCCC--CGCTCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGCCGC------------ |
| Macaca_mulatta | mml-let-7a-3:1-74 + | -----------------------GGGTGAGGTAGTAGGTTGTATAGTT--------TGGGGCTCTGCCC--TGCTATGGGATAACTATACAATCTACTGTCTTTCCT----------------------- |
| Gorilla_gorilla | ggo-let-7a:1-109 + | ---AGACCGACTGCCCTTT---GGGGTGAGGTAGTAGGTTGTATAGTT--------TGGGGCTCTGCCC--TGCTATGGGATAACTATACAATCTACTGTCTTTCCTGAAGTGGCTGTAATATCT----- |
| Pongo_pygmaeus | ppy-let-7a-3:1-74 + | -----------------------GGGTGAGGTAGTAGGTTGTATAGTT--------TGGGGCTCTGCCC--TGCTATGGGATAACTATACAATCTACTGTCTTTCCT----------------------- |
| Homo_sapiens | hsa-let-7a-3:1-74 + | -----------------------GGGTGAGGTAGTAGGTTGTATAGTT--------TGGGGCTCTGCCC--TGCTATGGGATAACTATACAATCTACTGTCTTTCCT----------------------- |
| Mus_musculus | mmu-let-7f-2:1-83 + | -------------------TGTGGGATGAGGTAGTAGATTGTATAGTT-------TTAGGGTCATACCC-CATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG-------------------- |
| Rattus_norvegicus | rno-let-7f-2:1-83 + | -------------------TGTGGGATGAGGTAGTAGATTGTATAGTT-------TTAGGGTCATACCC-CATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG-------------------- |
| Macaca_mulatta | mml-let-7f-2:1-83 + | -------------------TGTGGGATGAGGTAGTAGATTGTATAGTT-------TTAGGGTCATACCC-CATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG-------------------- |
| Pongo_pygmaeus | ppy-let-7f-2:1-83 + | -------------------TGTGGGATGAGGTAGTAGATTGTATAGTT-------TTAGGGTCATACCC-CATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG-------------------- |
| Homo_sapiens | hsa-let-7f-2:1-83 + | -------------------TGTGGGATGAGGTAGTAGATTGTATAGTT-------TTAGGGTCATACCC-CATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG-------------------- |
| Mus_musculus | mmu-let-7a-1:1-94 + | --------------TTCACTGTGGGATGAGGTAGTAGGTTGTATAGTT-------TTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGAT--------------- |
| Rattus_norvegicus | rno-let-7a-1:1-94 + | --------------TTCACTGTGGGATGAGGTAGTAGGTTGTATAGTT-------TTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGAT--------------- |
| Macaca_mulatta | mml-let-7a-1:1-80 + | ---------------------TGGGATGAGGTAGTAGGTTGTATAGTT-------TTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTA---------------------- |
| Pongo_pygmaeus | ppy-let-7a-1:1-80 + | ---------------------TGGGATGAGGTAGTAGGTTGTATAGTT-------TTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTA---------------------- |
| Homo_sapiens | hsa-let-7a-1:1-80 + | ---------------------TGGGATGAGGTAGTAGGTTGTATAGTT-------TTAGGGTCACACCCACCACTGGGAGATAACTATACAATCTACTGTCTTTCCTA---------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:20487426-20487546 + | ---AAAGACCATCCCATATTCAG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAG--TTATATTCAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCGAGACATCGGAGTTGAAA---------------------------------- |
| D_simulans | chr2L:20052694-20052814 + | ---AAAGACCATCCCATCTTCAG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAG--TTATACTCAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCGAGACATCGGAGTTGAAA---------------------------------- |
| D_yakuba | chr2R:6842709-6842830 + | ---AAAGAACATCCCACCATCAG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGT-ATATACTCAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCGAGTCATCGGAGTTGAAA---------------------------------- |
| D_eugracilis | scf7180000409767:814641-814757 - | --------AAAGAACTTTATCAG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGT-ATATAGAAAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCAAGACATCGAAGTTGAAA---------------------------------- |
| D_elegans | scf7180000491186:467220-467343 + | --------AAATAACATAATCAG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGT-ATATATTCAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCCTGACATCGAAGTAGAGTGAAAACA--------------------------- |
| D_ananassae | scaffold_12916:6985813-6985928 + | ---------AAATATCAAGAGAG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGTATAATAT-CAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCAAGACTTCAAGTTTAAAT---------------------------------- |
| D_pseudoobscura | chr4_group3:7845311-7845422 - | ----------GGAAATCAGAAGG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGTATAACATA-AAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCAAGACAGCGTCTACA------------------------------------- |
| D_persimilis | super_1:9292009-9292126 - | -----AAAGACGGAATCAGAAGG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGTATAACATA-AAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCAAGACATCGCCTACAG------------------------------------ |
| D_willistoni | scaffold_180708:1845911-1846049 + | ATAGATGGTAGATATATATGTAGCTACTTGGCCTCTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGTATATTAAATAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGTCCGACATCATCTACAATATAAT------------------------------ |
| D_virilis | scaffold_12963:13613413-13613527 - | ----------TGTGCTTACTTGG---------CCTTTGAGAGTTCCATGCTTCCTTACAT-TCAATAGT-ATTCAAATAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCGAAACATCACAAAAACAA---------------------------------- |
| D_grimshawi | scaffold_15126:6250403-6250508 + | ----------ATTGTTTACTTGG---------CCTTTGAGAGTTCCATGCTTCCTTGCAT-TCAATAGT-ATATAAATAAGCATATGGAATGTAAAGAAGTATGGAG--CGAAATCTGGCGAAACATC-------------------------------------------- |
| Caenorhabditis_briggsae | cbr-mir-1:1-94 + | ---------------------TG---------CTGTGCCGAGCTGCATACTTCCTTACATGCCCATACTGTACTGTGAATGGATATGGAATGTAAAGAAGTATGTAGAACGGAATCTAACGGCG------------------------------------------------ |
| Caenorhabditis_elegans | cel-mir-1:1-96 + | ----------------AAAGTGA---------CCGTACCGAGCTGCATACTTCCTTACATGCCCATACTATATCATAAATGGATATGGAATGTAAAGAAGTATGTAG--AACGGGGTGGTAGT------------------------------------------------- |
| Macaca_mulatta | mml-mir-206:1-86 + | ---------------------TG---------CTTCCCGAGGCCACATGCTTCTTTATATCCCCATAT--GGAT-TACTTTGCTATGGAATGTAAGGAAGTGTGTGG--T----TTCGGCAAGTG----------------------------------------------- |
| Gorilla_gorilla | ggo-mir-206:1-112 + | ------------GCTGCTTCTGGATGACACTGCTTCCCGAGGCCACATGCTTCTTTATATCCCCATAT--GGAT-TACTTTGCTATGGAATGTAAGGAAGTGTGTGG--T----TTCGGCAAGTGCCTCCTCG--------------------------------------- |
| Pongo_pygmaeus | ppy-mir-206:1-86 + | ---------------------TG---------CTTCCCGAGGCCACATGCTTCTTTATATCCCCATAT--GGAT-TACTTTGCTATGGAATGTAAGGAAGTGTGTGG--T----TTCGGCAAGTG----------------------------------------------- |
| Homo_sapiens | hsa-mir-206:1-86 + | ---------------------TG---------CTTCCCGAGGCCACATGCTTCTTTATATCCCCATAT--GGAT-TACTTTGCTATGGAATGTAAGGAAGTGTGTGG--T----TTCGGCAAGTG----------------------------------------------- |
| Mus_musculus | mmu-mir-206:1-73 + | -------------------------------------CCAGGCCACATGCTTCTTTATATCCTCATAG--ATATCT-CAGCACTATGGAATGTAAGGAAGTGTGTGG--T----TTTGG----------------------------------------------------- |
| Rattus_norvegicus | rno-mir-206:1-84 + | --------------------------------CTTCCCCAGGCCACATGCTTCTTTATATCCTCATAG--ATAT-CACTGCGCTATGGAATGTAAGGAAGTGTGTGG--T----TTTGGCAAGTG----------------------------------------------- |
| Mus_musculus | mmu-mir-1a-1:1-77 + | -----------------------------------GCTTGGGACACATACTTCTTTATATGCCCATAT--GAACCTGCTAAGCTATGGAATGTAAAGAAGTATGTAT--T----TCAGGC---------------------------------------------------- |
| Macaca_mulatta | mml-mir-1-1:1-77 + | -----------------------------------GCTTGGGAAACATACTTCTTTATATGCCCATAT--GGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTAT--C----TCAGGC---------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-1-1:1-71 + | --------------------------------------TGGGAAACATACTTCTTTATATGCCCATAT--GGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTAT--C----TCA------------------------------------------------------- |
| Homo_sapiens | hsa-mir-1-1:1-71 + | --------------------------------------TGGGAAACATACTTCTTTATATGCCCATAT--GGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTAT--C----TCA------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-1:1-87 + | ---------------------TG---------CCTACTCAGAGCACATACTTCTTTATGTACCCATAT--GAACATAGAATGCTATGGAATGTAAAGAAGTGTGTAT--T----TTGGGTAGGTA----------------------------------------------- |
| Mus_musculus | mmu-mir-1a-2:1-72 + | -------------------------------------TCAGAGCACATACTTCTTTATGTACCCATAT--GAACATTCAGTGCTATGGAATGTAAAGAAGTATGTAT--T----TTG------------------------------------------------------- |
| Macaca_mulatta | mml-mir-1-2:1-72 + | --------------------------------------CAGAGTACATACTTCTTTATGTACCCATAT--GAACATACAAGGCTATGGAATGTAAAGAAGTATGTAT--T----TTGG------------------------------------------------------ |
| Gorilla_gorilla | ggo-mir-1:1-111 + | ----AGCTAACAACTTAGTAATA---------CCTACTCAGAGTACATACTTCTTTATGTACCCATAT--GAACATACAATGCTATGGAATGTAAAGAAGTATGTAT--T----TTTGGTAGGCAATAAACC---------------------------------------- |
| Homo_sapiens | hsa-mir-1-2:1-85 + | ----------------------A---------CCTACTCAGAGTACATACTTCTTTATGTACCCATAT--GAACATACAATGCTATGGAATGTAAAGAAGTATGTAT--T----TTTGGTAGGC------------------------------------------------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:2635213-2635319 - | ------CCTCATCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATA--TCCATCGA---------- |
| D_simulans | chr3R:2666345-2666451 - | ------CCTCATCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATA--TCCATCGA---------- |
| D_yakuba | chr3R:7777990-7778096 + | ------CCTCATCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAG-TTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATA--TCCATCGG---------- |
| D_eugracilis | scf7180000409886:257332-257438 + | ------CTCCTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATG--TTCATCGA---------- |
| D_elegans | scf7180000491278:1424384-1424490 - | ------CCCCTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATA--TCCAGCGA---------- |
| D_ananassae | scaffold_13340:5417353-5417464 + | ------CCTATCCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAG-TTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATT--TCCATCGTAAAAT----- |
| D_pseudoobscura | chr2:19739488-19739592 + | --------TCTCAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATG--TACAACGA---------- |
| D_persimilis | super_3:2487675-2487785 + | --TTTGGTTCTCAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGTTCAATG--TACAACGA---------- |
| D_willistoni | scaffold_181089:12007310-12007419 - | ---------------TTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAG--TGGTTCAATG--TTCTACAAACAAACCAAA |
| D_virilis | scaffold_13047:6092057-6092155 + | ---------------TTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAG-TTTTAAGGACAAATTCGGTTCTAGAGAGGTTTCTG--TGGCTCATTG--TCCAGCGA---------- |
| D_grimshawi | scaffold_14906:11443552-11443654 + | ----------TTCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTG--TGGCTCAATG--CCCACCGA---------- |
| Mus_musculus | mmu-mir-10a:1-110 + | -------GACCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATT-TTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTCA---------- |
| Rattus_norvegicus | rno-mir-10a:1-110 + | -------GACCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATT-TTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTCA---------- |
| Macaca_mulatta | mml-mir-10a:1-109 + | -------GATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATT-TTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTC----------- |
| Pongo_pygmaeus | ppy-mir-10a:1-110 + | -------GATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATT-TTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTCG---------- |
| Gorilla_gorilla | ggo-mir-10a:1-110 + | -------GATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATT-TTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTCT---------- |
| Homo_sapiens | hsa-mir-10a:1-110 + | -------GATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATT-TTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGCTCT---------- |
| Mus_musculus | mmu-mir-10b:1-68 + | ------------------------TATATACCCTGTAGAACCGAATTTGTGTGGTACCCA--CATAGTCACAGATTCGATTCTAGGGGAATATA---------------------------------- |
| Rattus_norvegicus | rno-mir-10b:1-109 + | ---CCAAAGTTGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTACCCA--CATAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTCA-------------- |
| Macaca_mulatta | mml-mir-10b:1-110 + | --CCAGAGGTTGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCA--TATAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTCA-------------- |
| Pongo_pygmaeus | ppy-mir-10b:1-110 + | --CCAGAGGTTGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCA--TATAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTCA-------------- |
| Gorilla_gorilla | ggo-mir-10b:1-110 + | --CCAGACATTGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCA--TATAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTCA-------------- |
| Homo_sapiens | hsa-mir-10b:1-110 + | --CCAGAGGTTGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCG--TATAGTCACAGATTCGATTCTAGGGGAATATATGGTCGATGCAAAAACTTCA-------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18471419-18471548 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAAT------------------C-AA--TGACA |
| D_simulans | chr2L:18160327-18160456 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAAT------------------C-AA--TGACA |
| D_yakuba | chr2R:4988205-4988334 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAAT------------------C-AA--TGACA |
| D_eugracilis | scf7180000409447:413958-414087 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGG-TTTTGG-CAACAAAAT------------------GGAA--TGACA |
| D_elegans | scf7180000491338:2438776-2438906 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAAT------------------CAAA--TGACA |
| D_ananassae | scaffold_12916:2378756-2378885 + | ATACTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAATCAAT--------------CGAA------- |
| D_pseudoobscura | chr4_group3:3634738-3634867 + | ATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAAT------------------TTA---TCACA |
| D_persimilis | super_1:5115309-5115438 + | ATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAAT------------------TTA---TCACA |
| D_willistoni | scaffold_180708:11622810-11622939 + | ATAGTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGGCCAACAAAAT------------------CGAA----TCG |
| D_virilis | scaffold_12963:18449830-18449980 + | ATACTCAAATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAAGACATATAAAATATATTAACAAAAATGACA |
| D_grimshawi | scaffold_15252:6427650-6427777 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAAC-TGGTTTTTGG-CAACAAAA---------------------GA--CTACA |
| Mus_musculus | mmu-mir-99b:1-70 + | --------------------GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA-CACAAGCTCGTGTCTGTGGGTCCGTGTC-------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-99b:1-70 + | --------------------GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA-CACAAGCTCGTGTCTGTGGGTCCGTGTC-------------------------------------------------------------- |
| Macaca_mulatta | mml-mir-99b:1-70 + | --------------------GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA-CACAAGCTCGTGTCTGTGGGTCCGTGTC-------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-99b:1-70 + | --------------------GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA-CACAAGCTCGTGTCTGTGGGTCCGTGTC-------------------------------------------------------------- |
| Mus_musculus | mmu-mir-99a:1-65 + | ----------------------CATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCG--CGCAAGCTCGTTTCTATGGGTCTGTG---------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-99a:1-81 + | --------------CCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCG--CACAAGCTCGTTTCTATGGGTCTGTGGCAGTGTG-------------------------------------------------------- |
| Macaca_mulatta | mml-mir-99a:1-81 + | --------------CCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCG--CACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG-------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-99a:1-81 + | --------------CCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTAAAGTGGACCG--CACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG-------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-99a:1-81 + | --------------CCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCG--CACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG-------------------------------------------------------- |
| Homo_sapiens | hsa-mir-99a:1-81 + | --------------CCCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGACCG--CACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG-------------------------------------------------------- |
| Mus_musculus | mmu-mir-100:1-80 + | --------------CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGCTGATTCTGCA----CACAAGCTTGTGTCTATAGGTATGTGTCTGTTAGG------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-100:1-80 + | --------------CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGCTGAC---CATGCA-CACAAGCTTGTGTCTATAGGTATGTGTCTGTTAGG------------------------------------------------------- |
| Macaca_mulatta | mml-mir-100:1-80 + | --------------CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT---AGTCCG-CACAAGCTTGTGTCTATAGGTATGTGTCTTTTAGG------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-100:1-80 + | --------------CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT---AGTCCG-CACAAGCTTGTATCTATAGGTATGTGTCTGTTAGG------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-100:1-80 + | --------------CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT---AGTCCG-CACAAGCTTGTATCTATAGGTATGTGTCTGTTAGG------------------------------------------------------- |
| Homo_sapiens | hsa-mir-100:1-80 + | --------------CCTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT---AGTCCG-CACAAGCTTGTATCTATAGGTATGTGTCTGTTAGG------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:17566355-17566484 + | CCCA---------AGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCATA-CCCAAT--A |
| D_simulans | chr2L:17270490-17270619 + | CCCA---------AGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCATA-CCCAAT--G |
| D_yakuba | chr2R:3533165-3533294 - | CCCA---------AGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTTC-----TCATA-CCCAAT--G |
| D_eugracilis | scf7180000409016:190114-190244 + | CCCA---------AGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCAGATCTCAAC--T |
| D_elegans | scf7180000491046:269607-269743 + | CCCA---------AGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTAC------AAGTTACTCAAACAAAA-AACAAAGCG |
| D_ananassae | scaffold_12916:3309677-3309806 - | CCAG---------AGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTAC------AAACTAC-----AAATG-ACATAT--T |
| D_pseudoobscura | chr4_group3:10867616-10867737 - | TCTC---------AGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTAC------TA----------TCAAA-AACAGC--A |
| D_persimilis | super_8:2078713-2078834 - | TCTC---------AGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTAC------TA----------TCAAA-AACAGC--A |
| D_willistoni | scaffold_180764:940183-940306 - | TTCT----CA--GA---------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTT-ATTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTAC------AAAAA-C-----CAAAA-CGCAAA--A |
| D_virilis | scaffold_12963:16493143-16493272 + | GACAACATTCGTGAGTGC----CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAA-TTTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTAC------AATTAAC-----AAA------AAT--A |
| D_grimshawi | scaffold_15252:13906813-13906947 + | GTGG---------TGTGTGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTT-TTTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCCA-----TTCAAA-TATA-ACCAGC--A |
| Caenorhabditis_elegans | cel-mir-124:1-96 + | GTCC--------------CACTTGTCATCTGGCATGCA----CCCTAGTGACTTTAGTGGACATCTAAGTC-T--------TCCAACTAAGGCACGCGGTGAATGCCACGTGGCCATGA----------------------TGG---------------G |
| Caenorhabditis_briggsae | cbr-mir-124:1-98 + | TTTC--------------CAGTCGTCATATGGC----GTCCACCTGAGTGACTTTAGTGGACATGTATAGT-T--------TCCAACTAAGGCACGCGGTGAATGCCACGTG--G---CAATTCTGG------G---------AT--------------- |
| Mus_musculus_1 | mmu-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Mus_musculus_3 | mmu-mir-124-3:1-68 + | -----------------------------------------CTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAG------------------------------------------------ |
| Mus_musculus_2 | mmu-mir-124-2:1-109 + | ATCAAGATCA--GAGAC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Rattus_norvegicus_1 | rno-mir-124-2:1-109 + | ATCAAGATCA--GAGAC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Rattus_norvegicus_2 | rno-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Rattus_norvegicus_3 | rno-mir-124-3:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Macaca_mulatta_1 | mml-mir-124a-2:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Macaca_mulatta_2 | mml-mir-124a-1:1-109 + | ATCAAGATCA--GAGGC--------------------TCTGCCCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Pongo_pygmaeus_2 | ppy-mir-124a:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCCCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Pongo_pygmaeus_1 | ppy-mir-124-2:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Gorilla_gorilla | ggo-mir-124a:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Homo_sapiens_1 | hsa-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Homo_sapiens_3 | hsa-mir-124-3:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Homo_sapiens_2 | hsa-mir-124-2:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18472300-18472439 + | -----AATATTGGCAT---TGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAAT-------AAGGC------------------------- |
| D_simulans | chr2L:18161211-18161350 + | -----AATATTGGCAT---TGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAAT-------AAGGC------------------------- |
| D_yakuba | chr2R:4989099-4989238 + | -----AATATTGGCAT---TGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAAT-------AAGGC------------------------- |
| D_elegans | scf7180000491338:2439758-2439904 + | -----AATATTGGCAT---TAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAAAAGAAAACCCAGGC------------------------- |
| D_eugracilis | scf7180000409447:414929-415073 + | -----AATATTGGCAT---TAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGAAAAATAAACA--AAGGC------------------------- |
| D_ananassae | scaffold_12916:2379461-2379598 + | -----AATATTGGTAT---TGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATACAAAA--------AAGA-------------------------- |
| D_pseudoobscura | chr4_group3:3635996-3636136 + | -----AGTATTGGTAT---GAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTATACAAAAAAA------AAAGC------------------------- |
| D_persimilis | super_2335:2506-2645 + | -----AGTATTGGTAT---GAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTATACAAAAAA-------AAAGC------------------------- |
| D_willistoni | scaffold_180708:11623324-11623458 + | -----ATTATTGGTAT---TAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAA------------AAAGC------------------------- |
| D_virilis | scaffold_12963:18451638-18451806 + | TATTACACATTGGTAT---TAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAA--------AAAACAAAAACAATTACAAAAAAATAAGAA |
| D_grimshawi | scaffold_15252:6428908-6429045 + | -----CACATTGGTAT---TAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCC--TAACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAAAAA---------AAAAC------------------------- |
| Mus_musculus | mmu-mir-125b-1:1-77 + | -------------------------------------TGCGCTCCCCTCAGTCCCTGAGACCC--TAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTG------------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-125b-1:1-87 + | -------------------------------------TGCGCTCCCCTCAGTCCCTGAGACCC--TAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGT---CGTGC------------------------------------------------------ |
| Macaca_mulatta | mml-mir-125b-1:1-88 + | -------------------------------------TGCGCTCCTCTCAGTCCCTGAGACCC--TAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGT---CGTGCT----------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-125b-1:1-88 + | -------------------------------------TGCGCTCCTCTCAGTCCCTGAGACCC--TAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGT---CGTGCT----------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-125b-1:1-88 + | -------------------------------------TGCGCTCCTCTCAGTCCCTGAGACCC--TAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGT---CGTGCT----------------------------------------------------- |
| Homo_sapiens | hsa-mir-125b-1:1-88 + | -------------------------------------TGCGCTCCTCTCAGTCCCTGAGACCC--TAACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGT---CGTGCT----------------------------------------------------- |
| Mus_musculus | mmu-mir-125a:1-68 + | ----------------------------------------------CTGGGTCCCTGAGACCCTTTAACCTGTGAG----GACGTCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTGG----------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-125a:1-85 + | -------TGCCGGCCT------------------------------CTGGGTCCCTGAGACCCTTTAACCTGTGAG----GACGTCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGC---CTGGC------------------------------------------------------ |
| Macaca_mulatta | mml-mir-125a:1-86 + | -------TGCCAGTCT------------------------------CTGGGTCCCTGAGACCCTTTAACCTGTGAG----GACATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGT---CTGGCC----------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-125a:1-86 + | -------TGCCAGTCT------------------------------CTAGGTCCCTGAGACCCTTTAACCTGTGAG----GACATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGT---CTGGCC----------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-125a:1-108 + | ----CCATGTTGCCAG---------------------------TCTCTAGGTCCCTGAGACCCTTTAACCTGTGAG----GACATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTGGTGT---CTGGCCCAACCACACACCTGGG------------------------------------- |
| Homo_sapiens | hsa-mir-125a:1-86 + | -------TGCCAGTCT------------------------------CTAGGTCCCTGAGACCCTTTAACCTGTGAG----GACATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGT---CTGGCC----------------------------------------------------- |
| Mus_musculus | mmu-mir-125b-2:1-71 + | ---------------------------------------------GCCTAGTCCCTGAGACCC--TAACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGTTCTTGGGACCTAGGC---------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-125b-2:1-88 + | --------ACCAGACT---------------------------TTTCCTAGTCCCTGAGACCC--TAACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGA-------------------------------GAGG-------------------------- |
| Macaca_mulatta | mml-mir-125b-2:1-89 + | --------ACCAGACT---------------------------TTTCCTAGTCCCTGAGACCC--TAACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGA-------------------------------GGGGA------------------------- |
| Pongo_pygmaeus | ppy-mir-125b-2:1-89 + | --------ACCAGACT---------------------------TTTCCTAGTCCCTGAGACCC--TAACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGA-------------------------------GGGGA------------------------- |
| Gorilla_gorilla | ggo-mir-125b-2:1-89 + | --------ACCAGACT---------------------------TTTCCTAGTCCCTGAGACCC--TAACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGA-------------------------------GGGGA------------------------- |
| Homo_sapiens | hsa-mir-125b-2:1-89 + | --------ACCAGACT---------------------------TTTCCTAGTCCCTGAGACCC--TAACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGA-------------------------------GGGGA------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:20616602-20616729 + | ----CATTCGAGAATTTCC-------------------ACCTGCAAC-ACTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGT---TTTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGA----------------AAGCCTAGTGAAC |
| D_simulans | chr2L:20179920-20180047 + | ----CATTCGAGAATTTGC-------------------ACCTGCAAC-GCTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGT---TTTTTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGA----------------AAGCCGAGCGAAC |
| D_yakuba | chr2R:6964793-6964921 + | ----TATTCCAGAATTTCC-------------------TCCTGCAAC-GCTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGT--TTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGA----------------AGTACGAGTAAAC |
| D_eugracilis | scf7180000409767:678694-678826 - | ---TTTTCCAGAAAATGAT------------------TATCTGCAAC-GCTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTACTTTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTCGTTGACAACGA----------------ATTTCGAGTGAAA |
| D_elegans | scf7180000491186:607671-607801 + | ----TATTAAACAAATTAT------------------TACCTGCAAC-GCTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTTTCAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGA----------------AATACGAGTGAAC |
| D_ananassae | scaffold_12916:7117508-7117634 + | ------TTCGTGAATGATT-------------------ATCTGCAAC-GCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTAT--CTTTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAA----------------AGTACAAGTGAAA |
| D_pseudoobscura | chr4_group3:7699977-7700121 - | -----------------------GACGCGTGTGTGCTTATGTACAACGGCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTAT--TTTATCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAAACAAAAGGCGCCAACAAATAATAAAG |
| D_persimilis | super_1:9145698-9145865 - | TATTTGTATGTGTATTTGTATGTGACGCGTGTGTGCTTATGTACAACGGCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTAT--TTTATCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAAACAAAAGGCGCCAACAAATAATAAAG |
| D_willistoni | scaffold_180708:2027542-2027651 + | -----------------------------------------TACAAC-ACTGAA-TGTAGCTGGTTGACATCGGGTCAGATCTAT-TTATTTGAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATCCCAACA-----------------AAAAGCAATGGAA |
| D_virilis | scaffold_12963:13475783-13475914 - | ------CAAACGAAGATATATATTGCCAATCGAATCACATTCACAAC-GCTGTG-TGTAGTTGGTTGACATCGGGTCAGATCTAT--TTCTGAAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGAAGCCAACAA----------------------------- |
| D_grimshawi | scaffold_15126:6389834-6389991 + | ----CAAACAAAACTATATACATGATTAATTTGAATTTATTTACAAC-GCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTAT--TTATTCGAGTATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGTCAACAAGTGAACTTAAG-----AACAATAGTGAAA |
| Mus_musculus | mmu-mir-133b:1-119 + | ----CCTCCAAAGGGA--------------------------GTGGC-CCCCTGCTCTGGCTGGTCAA-ACGGAACCAAGTCCGT-CTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAG-CAG-GGCTGGCAAAGCTCA----------------ATATTTGGAGA-- |
| Rattus_norvegicus | rno-mir-133b:1-84 + | -------------------------------------------------CCCTGCTCTGGCTGGTCAA-ACGGAACCAAGTCCGT-CTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAG-CAG-GGCTGGCAA----------------------------------- |
| Macaca_mulatta | mml-mir-133b:1-119 + | ----CCTCAGAAGAAAGAT--------------------------GC-CCCCTGCTCTGGCTGGTCAA-ACGGAACCAAGTCCGT-CTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAG-CAG-GGCTGGCAATTCCCA----------------GTCCTTGGAGA-- |
| Pongo_pygmaeus | ppy-mir-133b:1-119 + | ----CCTCAGAAGAAAGAT--------------------------GC-CCCCTGCTCTGGCTGGTCAA-ACGGAACCAAGTCCGT-CTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAG-CAG-GGCTGGCAATGCCAA----------------GTACTTGGAGA-- |
| Gorilla_gorilla | ggo-mir-133b:1-110 + | GTCACCTCAGAAGAAAGAT--------------------------GC-CCCCTGCTCTGGCTGGTCAA-ACGGAACCAAGTCCGT-CTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAG-CAG-GGCTGGCAATGCC------------------------------- |
| Homo_sapiens | hsa-mir-133b:1-119 + | ----CCTCAGAAGAAAGAT--------------------------GC-CCCCTGCTCTGGCTGGTCAA-ACGGAACCAAGTCCGT-CTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAG-CAG-GGCTGGCAATGCCCA----------------GTCCTTGGAGA-- |
| Macaca_mulatta | mml-mir-133c:1-102 + | ------------------------------------GGGAGCCAAAT-GCTTTGCTAGAGCTGGTAAA-ATGGAACCAAATCGAC--TGTCCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTGTGCATTGATGGCGCCG------------------------------ |
| Pongo_pygmaeus | ppy-mir-133c:1-102 + | ------------------------------------GGGAGCCAAAT-GCTTTGCTAGAGCTGGTAAA-ATGGAACCAAATCGAC--TGTCCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTGTGCATTGATGGCGCCG------------------------------ |
| Homo_sapiens | hsa-mir-133a-2:1-102 + | ------------------------------------GGGAGCCAAAT-GCTTTGCTAGAGCTGGTAAA-ATGGAACCAAATCGAC--TGTCCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTGTGCATTGATGGCGCCG------------------------------ |
| Mus_musculus | mmu-mir-133a-1:1-68 + | -----------------------------------------------------GCTAAAGCTGGTAAA-ATGGAACCAAATCGCC--TCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGC------------------------------------------------ |
| Mus_musculus | mmu-mir-133a-2:1-104 + | ------------------------------------AGAAGCCAAAT-GCTTTGCTGAAGCTGGTAAA-ATGGAACCAAATCAGC--TGTTGGATGGATTTGGTCCCCTTCAACCAGCTGTAGCTGCGCATTGATCACGCCGCA---------------------------- |
| Rattus_norvegicus | rno-mir-133a:1-87 + | -------------------------------------------CAAT-GCTTTGCTAAAGCTGGTAAA-ATGGAACCAAATCGCC--TCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGA-------------------------------------- |
| Macaca_mulatta | mml-mir-133a:1-87 + | ------------------------------------------ACAAT-GCTTTGCTAGAGCTGGTAAA-ATGGAACCAAATCGCC--TCTTCAATGGATTT-GTCCCCTTCAACCAGCTGTAGCTATGCATTGA-------------------------------------- |
| Pongo_pygmaeus | ppy-mir-133a:1-87 + | ------------------------------------------ACAAT-GCTTTGCTAGAGCTGGTAAA-ATGGAACCAAATCGCC--TCTTCAATGGATTT-GTCCCCTTCAACCAGCTGTAGCTATGCATTGA-------------------------------------- |
| Gorilla_gorilla | ggo-mir-133a:1-88 + | ------------------------------------------ACAAT-GCTTTGCTAGAGCTGGTAAA-ATGGAACCAAATCGCC--TCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGA-------------------------------------- |
| Homo_sapiens | hsa-mir-133a-1:1-88 + | ------------------------------------------ACAAT-GCTTTGCTAGAGCTGGTAAA-ATGGAACCAAATCGCC--TCTTCAATGGATTTGGTCCCCTTCAACCAGCTGTAGCTATGCATTGA-------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:11952744-11952864 - | TTACGATG-------------------------------------------GCGTC-GCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAA-----------TCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATAAAAA-----------------------------------GAG |
| D_simulans | chr2R:10688339-10688459 - | TTACGATG-------------------------------------------GCGTC-GCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAA-----------TCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATCAAAA-----------------------------------GCG |
| D_yakuba | chr2R:17032219-17032325 + | CC---------------------------------------------------------CAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGACA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATTAAAA-----------------------------------AAG |
| D_eugracilis | scf7180000409672:857315-857459 - | TTAAATGG-------------------------------------------TCGAC-GGCAATCTCCAATGGCCACGTGTATACTCGTAGCGATAACCTGATA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATCAAACCAAGCCACTGAAAG---CTATAAAAAAA-------CTG |
| D_elegans | scf7180000491107:959925-960044 - | TTAAAGTG-------------------------------------------GCGAC-GGCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCAGCGA-GATTTGTTCAGCAATCAAAC-----------------------------------GGA |
| D_ananassae | scaffold_13266:15447223-15447345 + | TTAAAGTG-------------------------------------------GCAACCTGGAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACGTGAAA-----------TGCGAAATGTTATTGCTTGAGAATACACGTAGTTCAGAGA-GATTTGTTCAGCAATCGAAG-----------------------------------TGG |
| D_pseudoobscura | chr3:16385856-16386036 - | TTAAGATG-----------ACAGCGACGGCC-----AAGGCAATGCCGACGGCGA-CTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATA-----------TCC-GAATGTTATTGCTTGAGAATACACGTAGTTTAACAA-GATTCGTTCAGCAATCAAACTGAA--ACGGAAAGTGTCTGTGAAAGGTGTCCTTAAAG |
| D_persimilis | super_4:376928-377074 + | TTAAGATG-----------ACAGCGACGGCCACGCCACGGCAATGCCGACGGCGA-CTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATA-----------TCC-GAATGTTATTGCTTGAGAATACACGTAGTTTAACAA-GATTCGTTCAGCAATCA----------------------------------------- |
| D_willistoni | scaffold_181141:1110993-1111093 - | TTT----------------------------------------------------------------AATGGCCACGTGTATTCTTATAGCTGTAACCTGTTA-----------TACAAAATGTTATTGCTTGAGAATACACGTAGTTAACT-A-GATTCGTTCAACGGGTCAAA-----------------------------------CAA |
| D_virilis | scaffold_10468:1951-2100 - | GTACGTCGGAGCAGACACGACAGC---GGAC-----ACAACAAT-----TGGAAA-TTGGAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGTAC---------AATC--AAATGTTATTGCTTGAGAATACACGTAGTTAACA-A-GATTCTCTCAACGATCCAA------------------------------------TAA |
| D_grimshawi | scaffold_15245:16918481-16918602 - | GGAGATTG-------------------------------------------GAAAATTAAAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAC---------AATC--AAATGTTATTGCTTGAGAATACACGTAGTTAACA-A-GATTGCCTCAACGACTCCAA-----------------------------------TAA |
| Caenorhabditis_elegans | cel-mir-234:1-96 + | CAAAAA----------------------------------------------------ATGAT---------CAAACGGTATTCCAGAGTTGATAATAAAAATGCGTCAGTCCGCAA--TCTATTATTGCTCGAGAATACCCTTTGACTACTAT-G--------TGTA--------------------------------------------- |
| Caenorhabditis_briggsae | cbr-mir-234:1-96 + | GACTCT---------------A-----------------------------------GCAAAGAT-------CAAACGGTATTCCTGAGTGAATAATAAAAATGAGTC------CAT--TCTATTATTGCTCGAGAATACCCTTTGACAAGC-T----------------GAAAA-----------------------------------GTG |
| Mus_musculus | mmu-mir-137:1-73 + | CTT------------------------------------------------------------------CGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-137:1-102 + | GGCCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Macaca_mulatta | mml-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Homo_sapiens | hsa-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243249-11243353 - | CCAA----GCCAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGAC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--GCGGCAGCG- |
| D_simulans | chr3R:10237822-10237926 + | CCAA----GCCAT---------------------AGTTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGAC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--TCGGCAGCG- |
| D_yakuba | chr3R:15188577-15188681 + | CCAA----GCCAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGCC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--TCGGCAACT- |
| D_eugracilis | scf7180000409281:109534-109638 + | CCGA----TATAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTTGCC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--GTT--TCGGCATCT- |
| D_elegans | scf7180000491080:1007119-1007223 - | CCGA----CATAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTTCCCA--CTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--TCAGCAACTG |
| D_ananassae | scaffold_13340:12827611-12827739 - | ACAAGAATCCCC-TCAAAAAAGGACGATCCATCGAGTTCTTA-CGTAACTCCTCAAAG-GGCTG-TGAAATGTTGCCA--TTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGGGA--ATC-GTCAGAAAAC- |
| D_pseudoobscura | chr2:9824930-9825029 + | CC-------CCA------------------------TACTTA-CGTAACCCATCAAAC-GGTTG-TGAAATGTTGCAT--TTAT-CA-AATCATATCACAGCCAT-TTTGATGAGTTTCGTGTGG--AATGGCCAGCAATC- |
| D_persimilis | super_0:10660066-10660165 - | CC-------CCA------------------------TACTTA-CGTAACCCATCAAAC-GGTTG-TGAAATGTTGCAT--TTAT-CA-AATCATATCACAGCCAT-TTTGATGAGTTTCGTGTGG--AATGGCCAGCAATC- |
| D_willistoni | scaffold_181089:2143204-2143324 - | CCGT----TCCG-GCAAAAGATGG---------AATTTCTTA-CGTAACTCTTCAAGGGGGTTG-TGAAATGTTGCCATTTTATTCA-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGAGTATT--CCTGCAACA- |
| D_virilis | scaffold_13047:13335625-13335725 + | CCAC----TC------------------------AATTCTTG-CGTAACTCTTCAAGG-GGTTG-TGAAATGTTGCCG--TTAT-CA-AGTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--GCTTAAATT- |
| D_grimshawi | scaffold_14906:4357674-4357778 - | CCAA----GCCC------------------ACCCAATTCTTG-CGTAACTCTTCAAGG-GGTTG-TGAAATGTGGGTA--TTAT-CA-AGTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--GCT---TTCA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA----C--A------------------------GTAT-ACAGAAAGCCATCAAAGCGGTGGTTGATGTGTTGCA-AATTAT-GACTTTCATATCACAGCCAGCTTTGATGTGCTGCCTGT------T--G---CACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243115-11243212 - | CACG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CACAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_simulans | chr3R:10237959-10238056 + | CGCG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_yakuba | chr3R:15188722-15188819 + | CACG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_eugracilis | scf7180000409281:109673-109770 + | CGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_elegans | scf7180000491080:1006986-1007083 - | CGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGCTTGT-GACCTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_ananassae | scaffold_13340:12827469-12827566 - | C--A-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAAGGCTTGT-GACCTTATGT---ATTT---CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAC |
| D_pseudoobscura | chr2:9825076-9825174 + | AGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ACTC---TTGAATCATATCACAGCCAT-TTTGACGAGTTTGGGTACAGAAATTTCAA |
| D_persimilis | super_0:10659921-10660019 - | AGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ACTC---TTGAATCATATCACAGCCAT-TTTGACGAGTTTGGGTACAGAAATTTCAA |
| D_willistoni | scaffold_181089:2143062-2143162 - | TGCA-----------------------------------------------------ACTTTCTTATACCATGTCGTTAAAATGTTTGT-GACTTTATGTTGTGTC----TCTATTCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_virilis | scaffold_13047:13335778-13335875 + | TGCA-----------------------------------------------------ATTTTCTTATACCATGTCGTTAAAATGCCTGT-GACCTTATGT---ATT----TTATATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_grimshawi | scaffold_14906:4357489-4357639 - | CGTGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTTCTCCTTTGTGTGTTTCTTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGT-GACCTTATGT---ATT----TTATATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATGTCAA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA-----------------------------------------------------CAG--TATACAGAAAGCCATCAAAGCGGTGGTTGATGTGTTGC---AAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT-GCCTGT---TGCACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:8985248-8985347 + | TCTA-CCT--------------------------------CTGCTG------------TCTATTAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GACAGCCAGC-CT |
| D_simulans | chrX_random:2632466-2632565 + | TCTG-CCT--------------------------------CTGCTG------------TCTATCAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GGCAGCCAGC-CT |
| D_yakuba | chrX:12330556-12330651 - | CTTA-CCC--------------------------------CTGCTG------------TCTAGTAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGCTG-GCCAGTC-----T |
| D_eugracilis | scf7180000409631:397666-397764 + | CTTA-CCT--------------------------------TTGCTG------------TCTATTAACGCGTTAAAATGACTGTGAGCTA--TGTTG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GGCAGGCA-C-AT |
| D_elegans | scf7180000491006:2500520-2500618 + | TCTG-CTA--------------------------------CTGCTG------------TCTATTAACGCGTCAAAATGACTGTGAACTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGGTG-GGCAGGCA-C-AT |
| D_ananassae | scaffold_13047:797460-797571 + | TGTC-CCG--------------------------------CTTCTGCTTCATTACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTA--TGCGT----ATTTG-ATGTCATATCACAGCCAT-TTTGACGAGTTTGGTG-GACAGTGAAA-GT |
| D_pseudoobscura | chrXL_group1e:7000785-7000885 - | GCTA-CTG--------------------------------CTGCTG------------CACATTTACGCGTCAAAATGACTGTGAGCTA--TGTGT----TTTTG-ATCTCATATCACAGCCAT-TTTGACGAGTTTGATG-TGCAGTCCCACTC |
| D_persimilis | super_13:1553253-1553353 + | GCTA-CTG--------------------------------CTGCTG------------CACATTTACGCGTCAAAATGACTGTGAGCTA--TGTGT----TTTTG-ATCTCATATCACAGCCAT-TTTGACGAGTTTGATG-TGCAGTCCCACTC |
| D_willistoni | scaffold_180777:2053037-2053171 + | TCCCCCAATGTACCTACCCCTGCAACTGCTGTGCTTACAACTGATG------------TCCATGGTCGCGTCAAAATGACTGTGAGCTA--TGTTAACCGGTCAGAAATTCATATCACAGCCAT-TTTGACGAGTTCGATG-GGCATAC----GA |
| D_virilis | scaffold_12970:9304312-9304422 + | TCTC-TCG-----------------------CTGCTGCCAATGCTC------------CATATTGGCGCGTCAAAATGACTGTGAGCTA--TGTTGTTGCATTTGCCATTCATATCACAGCCAT-TTTGACGAGTTTGATGTGGCAGCCA----- |
| D_grimshawi | scaffold_15203:306998-307104 + | TC-----G-----------------------TTGCTATCAGTGCTC------------CATATTGGCGCGTCAAATTGACTGTGAGCTA--TGTTGTTGCAGTTGTAATTCATATCACAGCCAT-TTTGACGAGTTTGATGTGGCAGCCA----- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA-CAG------------------------------------TA------------TACAGAAAGCCATCAAAGCGGTGGT---TGATGTGTTGCAAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCTGCCTGTTGCACT-----GT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:9216892-9217021 - | CT--GGGCTGA-CCCG--A-----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCACTT---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAA-T------ACCCA-TT |
| D_simulans | chr2R:7673827-7673955 - | CT--GGGCTGA-CCCG--A-----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTT---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAA-T------CCCCA-TT |
| D_yakuba | chr2R:7742247-7742374 + | CT--GGGCTGA-CCCG--A-----G----TGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATT----GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAA-T------CCCCA-TT |
| D_eugracilis | scf7180000409663:1025828-1025957 - | GT--AGGCTGATCCCA--A-----G----GATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-AAA-T------CCCCA-TG |
| D_elegans | scf7180000491282:440692-440819 - | CT--TGGCTGA-CCTC--A-----G----GGTTGGTCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTA---TGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCATGTCATCAAT-AGG-T------CT--ATAT |
| D_ananassae | scaffold_13266:16524568-16524693 - | CCCAGTGCC------GGCGA---------GTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAA---TGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGG-TTG-T------C--CA-TC |
| D_pseudoobscura | chr3:696696-696816 + | G----GGTCGG-CCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA---------------------- |
| D_persimilis | super_2:863138-863258 + | G----GGTCGG-CCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA---------------------- |
| D_willistoni | scaffold_181009:2073162-2073280 - | AC--G---------CGAAGAGTCAGTTAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAT---CTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA---------------------- |
| D_virilis | scaffold_12875:243286-243412 + | TT--GGGCT----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAT---CTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAACTAAGTGCAGCAACT-ATTT |
| D_grimshawi | scaffold_15245:10719551-10719668 - | CC--AGCCTGC-ATAT--G-----G----TTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGGATAA---CTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA-------------------- |
| Mus_musculus | mmu-mir-184:1-69 + | CC---------------------------------------------TTTCCTTATCACTTTTCCAGCCA-GCTTTG------TGACTCT--AAGTGTTGGACGGAGAACTGATAAGGGTAGG-------------------------------------- |
| Rattus_norvegicus | rno-mir-184:1-77 + | C-------------------------------------------ACTTTCCCTTATCAGTTTTCCAGCCA-GCTTTG------TGACTGT--AAATGTTGGACGGAGAACTGATAAGGGTAAGTGACTG-------------------------------- |
| Macaca_mulatta | mml-mir-184:1-84 + | TC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCC------AGCTTTATGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Pongo_pygmaeus | ppy-mir-184:1-84 + | CC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCCAGCTTTG------TGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Homo_sapiens | hsa-mir-184:1-84 + | CC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCCAGCTTTG------TGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:8564884-8565013 + | ACT--TGC---------CCTTC-----------AA-------AACG-AACTAAT------------TGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGACCCTCGCC-AATCTACTAAAACA------- |
| D_simulans | chr3L:8005898-8006027 + | ACT--TGC---------CCTTC-----------AA-------AACG-AACTAAT------------TGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTATCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGACCCTCGCC-AATCTACTAAAACA------- |
| D_yakuba | chr3L:3348658-3348787 - | ACT--AGC---------CCTTC-----------AA-------AACG-AACTAAT------------TGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGACCCTCGCC-AATCTACTAAAACA------- |
| D_eugracilis | scf7180000409524:96530-96659 - | ACT--AGT---------CCCTC-----------AA-------AACG-AACTAAT------------TGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGACCCTCGCC-AATCTACTAAAAAA------- |
| D_elegans | scf7180000491268:124838-124968 - | ACT--AGT---------CCTTC-----------AA-------AACC-AACTAAT------------TGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGACCCTCGCC-AATCTACTAAAACAA------ |
| D_ananassae | scaffold_13337:8074872-8075002 - | ACT--CGC---------CTCTC-----------CA-------AACACAACTAAT------------TGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGACTCTCGCC-AATCTACTAAAATA------- |
| D_pseudoobscura | chrXR_group3a:147689-147845 - | ACT--AGTTAACCCTAACTCTCATCTGCCCACAAACCAACCCAACG-AACTAAT------------TGGGGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAGAGTTCACCCAGGAATCAAACATATTATTACTGTGATACCCGGA-AATCTACTAAACCC------- |
| D_persimilis | super_23:151050-151206 - | ACT--AGTTAACCCTAACTCTCATCTGCCCACAAACCAACCCAACG-AACTAAT------------TGGGGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAGAGTTCACCCAGGAATCAAACATATTATTACTGTGATACCCGGA-AATCTACTAAACCC------- |
| D_willistoni | scaffold_180949:5214317-5214457 + | ACT-TGCC---------CTCTCATCTGCCCACAAA-------AACG-AACTAAT------------TGATGGTCCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGATCGTCGG--AATCTACTAAAAAC------- |
| D_virilis | scaffold_13049:6215347-6215479 + | ACC---------------------------------------AAATCAAACTACCCCCCACTCATCTAATGATTCCAGTAAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGATTGTTGAA-ACTCTACTAAACCA------- |
| D_grimshawi | scaffold_15072:36258-36427 + | ACTACCAATAAAATAAAAATCCAAC--------CAATCAACCAACC-AACCAACTACCCACTCATCTAATGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGTGATTGTTGAA-ACTCTACTAAAAACAAATCAA |
| Mus_musculus | mmu-mir-190a:1-67 + | ---------------------------------------------------------------------------CTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAGCATATTCCTACAG--------------------------------- |
| Rattus_norvegicus | rno-mir-190a:1-85 + | ------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAGCATATTCCTACAGTGTCTTGCC------------------------ |
| Macaca_mulatta | mml-mir-190a:1-85 + | ------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGTGTCTTGCC------------------------ |
| Pongo_pygmaeus | ppy-mir-190a:1-85 + | ------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGTGTCTTGCC------------------------ |
| Gorilla_gorilla | ggo-mir-190a:1-85 + | ------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGTGTCTTGCC------------------------ |
| Homo_sapiens | hsa-mir-190a:1-85 + | ------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGTGTCTTGCC------------------------ |
| Mus_musculus | mmu-mir-190b:1-80 + | ----------------------------------------------------------------------TGCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTAAATTATGAA--CCAACTGAATGTCAAGCATACTCTCACAGCAGTAAG-------------------------- |
| Rattus_norvegicus | rno-mir-190b:1-78 + | ----------------------------------------------------------------------TGCTTCTGTGTGATATGTTTGATAT--TAGGTTGTTAAATTATGAA--CCAACTAAATGTCAAACAT--TCTCACAGCAGTGAG-------------------------- |
| Macaca_mulatta | mml-mir-190b:1-79 + | ----------------------------------------------------------------------TGCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGGAA--CCAACTAAATGTCAAACATATTCTTACAGCAGCTG--------------------------- |
| Pongo_pygmaeus | ppy-mir-190b:1-79 + | ----------------------------------------------------------------------TGCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGGAA--CCAACTAAATGTCAAACATATTCTTACAGCAGCAG--------------------------- |
| Gorilla_gorilla | ggo-mir-190b:1-112 + | -----------------CTCTCC-------------------------------------------TGCCTGCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGGAA--CCAACTAAATGTCAAACATATTCTTACAGCAGCAGGT----GATTCAGCACCACCCTCTTTC |
| Homo_sapiens | hsa-mir-190b:1-79 + | ----------------------------------------------------------------------TGCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGGAA--CCAACTAAATGTCAAACATATTCTTACAGCAGCAG--------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:21567099-21567236 + | ----------------------TTTGATCGC--AATCCGTGTGTGCCCTTATTATGGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATATAGCCATATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACAGGTTCGAC------- |
| D_simulans | chr3L:20903305-20903442 + | ----------------------TTCGATCGC--AATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATATAGCCATATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACAGGTTCGAC------- |
| D_yakuba | chr3L:18945598-18945735 - | ----------------------TTTGATCGG--AATCCGTGAGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATATAGCCATATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACAGGTTCGAC------- |
| D_eugracilis | scf7180000409472:386343-386481 + | ----------------------CTTATTCGA--AATCCGCGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATACAGCCATATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACAGGTTACGAT------ |
| D_elegans | scf7180000491255:2722765-2722902 - | ---------------------TCTTGTTAGA--AATA--CGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATTTCGCCATATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACAGGTTACGAT------ |
| D_ananassae | scaffold_13337:17070826-17070956 - | ----------------------CCGAATCGA--AATCTGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATATTGCCATATTCATAAATTCTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACTA-------------- |
| D_pseudoobscura | chrXR_group6:2746028-2746170 - | ----------------------CTCAATTGG--AATATTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATACAGCCGTATTAATAAATCTTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACTGGCTTAACAATAA-- |
| D_persimilis | super_9:1042494-1042636 - | ----------------------CTCAATTGG--AATATTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGC--AGTTATTGCTATACAGCCGTATTAATAAATCTTCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACTGGCTTAACAATAA-- |
| D_willistoni | scaffold_180727:1082196-1082335 - | ----------------------TTTAATTAATCAATCTGTGTGTGCGCCCATTATGGTTGGGATTTTTTAGATCAGC--AGTTATTGCTACAAGTCAAAAATTTATTATCATCTACTGGCCTACTAAGTCCCAACATAA----------TGAGAGTAAAAACCACTGACGAAAT------- |
| D_virilis | scaffold_13049:17910638-17910773 + | ----------------------CTTAATGGT--TGTAAGCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGC--AGTTATTGATATATATATGTA-TCGTAAATCTTCTACTGGCCTACTAAGTCTCAATATAA----------TGGGAGTAAAAACCTCAGTATAAC-------- |
| D_grimshawi | scaffold_10030:24062-24212 - | TATAACTATCGAGGAAATTTACATAAATGTG--CTAAAGCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGC--AGTTATTGATAAAGACCTTTA-TCGTAAATCTTCTACTGGCCTACTAAGTCCCAATATAA----------TGGGAGTAAAACCCTCA--------------- |
| Mus_musculus | mmu-mir-193b:1-79 + | -------------------------------------------GGC-----CCAGAATCGGGGTTTTGAGGGCGAGATGAGTTTGTGTTTTA------------------TCCAACTGGCCCACAAAGTCCCGCT--------------------------TTTGGGGTCA---------- |
| Macaca_mulatta | mml-mir-193b:1-83 + | ----------------------------------------GTGGTC-----TCAGAATCGGGGTTTTGAGGGCGAGATGAGTTTATGTTTTA------------------TCCAACTGGCCCTCAAAGTCCCGCT--------------------------TTTGGGGTCAT--------- |
| Pongo_pygmaeus | ppy-mir-193b:1-83 + | ----------------------------------------GTGGTC-----TCAGAATCGGGGTTTTGAGGGCGAGATGAGTTTATGTTTTA------------------TCCAACTGGCCCTCAAAGTCCCGCT--------------------------TTTGGGGTCAT--------- |
| Gorilla_gorilla | ggo-mir-193b:1-112 + | ---------------------------------GGAGGTTGTGGTC-----TCAGAATCGGGGTTTTGAGGGCGAGATGAGTTTATGTTTTA------------------TCCAACTGGCCCTCAAAGTCCCGCTTTTGGGGTCATTCTGGACAGCGAGGGACTCAGG------------- |
| Homo_sapiens | hsa-mir-193b:1-83 + | ----------------------------------------GTGGTC-----TCAGAATCGGGGTTTTGAGGGCGAGATGAGTTTATGTTTTA------------------TCCAACTGGCCCTCAAAGTCCCGCT--------------------------TTTGGGGTCAT--------- |
| Mus_musculus | mmu-mir-193a:1-66 + | ----------------------------------------------------GAGAGCTGGGTCTTTGCGGGCAAGA--TGAGAGTGTCAG-------------------TTCAACTGGCCTACAAAGTCCCAGT--------------------------CCTC---------------- |
| Rattus_norvegicus | rno-mir-193:1-86 + | ----------------------------------GCGGACGGGAGC-----TGAGAGCTGGGTCTTTGCGGGCAAGA--TGAGGGTGTCAG-------------------TTCAACTGGCCTACAAAGTCCCAGT--------------------------CCTCGGCTCCC--------- |
| Macaca_mulatta | mml-mir-193a:1-85 + | ------------------------------------GGATGGGAGC-----TGAGGGCTGGGTCTTTGCGGGCGAGA--TGAGGGTGTCGGA-------------------TCAACTGGCCTACAAAGTCCCAGT--------------------------CCTCGGCCCCCG-------- |
| Pongo_pygmaeus | ppy-mir-193a:1-88 + | ---------------------------------CGAGGATGGGAGC-----TGAGGGCTGGGTCTTTGCGGGCGAGA--TGAAGGTGTCGGA-------------------TCAACTGGCCTACAAAGTCCCAGT--------------------------CCTCGGCCCCCG-------- |
| Gorilla_gorilla | ggo-mir-193a:1-111 + | ---------------GACGCACCCCGAACTC--CGAGGATGGGAGC-----TGAGGGCTGGGTCTTTGCGGGCGAGA--TGAGGGTGTCGAA-------------------TCAACTGGCCTACAAAGTCCCAGT--------------------------TCTCGGCCCCCGGGACCAG- |
| Homo_sapiens | hsa-mir-193a:1-88 + | ---------------------------------CGAGGATGGGAGC-----TGAGGGCTGGGTCTTTGCGGGCGAGA--TGAGGGTGTCGGA-------------------TCAACTGGCCTACAAAGTCCCAGT--------------------------TCTCGGCCCCCG-------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:18022237-18022366 + | CCACGT----CCGGAAC-----CGAAAGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------------------------------------------------------------------------------------CCAGCCATTGTTCCATC |
| D_simulans | chrX_random:4635946-4636075 + | CCACGT----CCGGAAC-----CGAAAGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------------------------------------------------------------------------------------CCAGCCATTGTTCCATC |
| D_yakuba | chrX:16646312-16646441 + | CCATGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA-------------------------------------------------------------------------------------CCAGCCATCGTCCCATA |
| D_eugracilis | scf7180000408176:660268-660428 - | CTGCGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGA------------------ATAGA----AC--CAAAAACGAGAACCAGCA-GC-----------------C-A-A----------CCAATCATCATCCAATA |
| D_elegans | scf7180000491193:230657-230827 + | CTGCGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGATTAACCAGCACCACAAGCACCAA--AAGCACCAAA--AGC--AGCAG--------------------------------------CAGCCATCATCCAATA |
| D_ananassae | scaffold_13335:1603991-1604112 - | GCGTT-------------------AACGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACCAA---------------------------------------------------------------------TCA-A----------CTGACCACCAG---ATC |
| D_pseudoobscura | chrXL_group3a:1970441-1970623 - | ATATGT----GA-TT--TAGCTCGATCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--TTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA------------------ACTAAACAAAC--CAAAAAGGA--AGTTGAACGCCTAATGCAATCGATGAGT-G-TTG-GGTTGCTTCAGTTT---------C |
| D_persimilis | super_11:2708510-2708698 + | ATATGT----GA-TT--TAGCTCGATCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--TTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA------------------ACTAAACAAAC--AAAAAAGGA--AGTTGAACGCCTAATGCAATCGATGAGT-G-TTG-GGTTGCTTCAGTT-TCATTCC--A |
| D_willistoni | scaffold_181096:12033222-12033334 + | CAATCG----CAAAAGC-----ATAACGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCAGAAAACGACCAG------------------------------------------------------------------------------------------------------ |
| D_virilis | scaffold_12928:1257190-1257317 - | TATATT----T---AAA-----CGAGCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTC--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGACCAGAGAAACAGCGAA---------------------------------------------------------------------T-A-T----------TTAACTATTTTTC---C |
| D_grimshawi | scaffold_15203:8453543-8453644 + | ---------------------------GGAGCTTATTG-GAGCTGCTGG-CCACTGCACAAGATTAGA--TTCAAAAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGACCAGATAA----CAT-------------------------------------------------------------------------------------CAAGCCAT--------- |
| Mus_musculus | mmu-mir-210:1-110 + | CCGGGG----CA-GT--C-C--CTCCAGG--CTCAGGA-CAGCCACTGC-CCACCGCACACTGCGTTG--CTC--CGGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-CCCTG-GGCAGCGC--GAAC---------C |
| Rattus_norvegicus | rno-mir-210:1-110 + | CCGGGG----CA-GT--C-C--CTCCAGG--CTCAGGA-CAGCCACTGC-CCACAGCACACTGCGTTG--CTC--CGGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-CCCTG-GGCAGCGC--GAAC---------C |
| Macaca_mulatta | mml-mir-210:1-110 + | ACCCGG----CA-GT--C-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GACC---------C |
| Pongo_pygmaeus | ppy-mir-210:1-120 + | ACCCGG---GCA-GT--CTC--CTCCAGG--CGCAGGGCCAGCCCCTGCCCCACCGCACACTGCGCTGCCCCC--AAGACCACACGTGTGCCGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTGAGGCAGCGC--GACC---------C |
| Gorilla_gorilla | ggo-mir-210:1-111 + | GCCCACCCGGCA-GT--C-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GA------------ |
| Homo_sapiens | hsa-mir-210:1-110 + | ACCCGG----CA-GT--G-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GACC---------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:17308091-17308220 + | AAATAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TATTCAA---TATTCAAGGGTTGCGACTGGGCATCGCGGCTCG---------AAATAAGAATACAACTCGGCAACCAAATCA- |
| D_simulans | chr3L:16646167-16646296 + | AAATAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TATTCAA---TATTCAAGGGTTGCGACTGGGCATCGCGGCTCG---------AAATAAGAATACAACTCGGCAACCAAATCA- |
| D_yakuba | chr3L:16762572-16762701 - | AAATAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TATTCAA---TATTCAAGGGTTGCGACTGGGCATCGCGGCTCG---------AAATAAGAATACAACTCGGCAACCAAATCA- |
| D_elegans | scf7180000490993:219049-219178 + | AAATAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TATTCAA---TATTCAAGGGTTGCGACTGGGCATCGCGGCTCG---------AAATAAGAATACAACTCAGCAACCAATTCA- |
| D_eugracilis | scf7180000409711:25996-26125 - | AAATAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TATTCAA---TATTCAAGGGTTGCGACTGGGCATCGCGGCTCG---------AAATAAGAATACAACTCGGCAGCCAAATCA- |
| D_ananassae | scaffold_13337:8265335-8265463 + | CAAAATAT-TTTGGTTAATTCAATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-ATTCAAA---TACTCAAGGGTTGCGACTGGGCATCGCGGCTCG---------AAATACGAATACAACGAAGAGAACCATTTC- |
| D_pseudoobscura | chrXR_group6:9338098-9338227 - | ATCAAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TATCCAA---TACTCAAGGGTTGTGACTGGACATCGCGGCTCG---------AAATAAGAATACAACCCAGCAACCAAAATC- |
| D_persimilis | super_35:387455-387584 + | ATCAAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TATCCAA---TACTCAAGGGTTGTGACTGGACATCGCGGCTCG---------AAATAAGAATACAACCCATCAACCAAAATC- |
| D_willistoni | scaffold_180955:2086476-2086593 + | ---AAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TTTCAAA---TACTCAAGGGTTGCATCTGGGCATCGCGGCTCG---------AAATAAGAATACACCCAATAA---------- |
| D_virilis | scaffold_13049:5991414-5991542 - | GTATAAATATTTGGTTAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TTTCAAA---TACTCAAGGGTTGCGACTGGGCATCGCGGCTCG---------AAATGAGAATCCAACCCA-CAACCAAACAA- |
| D_grimshawi | scaffold_15110:13121815-13121944 + | TAACAAACATTTGGTGAATTCGATTTTTAGCTA-TGATTGTCCAAACGCAATTCTTGT-TGA-TTTCAAA---AACTCAAGGGTTGCATCTGGGCATCGCGGCTCG---------AAATGAGAATACAACACAAAAATCAAAACA- |
| Mus_musculus | mmu-mir-219-2:1-97 + | ----------------ACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG--CCAACCGAGAATTGTGGCTGGACATCTGTGGTTG---------AGCTCCGGG---------------------- |
| Rattus_norvegicus | rno-mir-219-2:1-96 + | ----------------ACTCAGGGGCTTCACCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG--CCAACCGAGAATTGTGGCTGGACATCTGTGGTTG---------AGCTCCGG----------------------- |
| Macaca_mulatta | mml-mir-219-2:1-97 + | ----------------ACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG--CCAACCGAGAATTGTGGCTGGACATCTGTGGCTG---------AGCTCCGGG---------------------- |
| Pongo_pygmaeus | ppy-mir-219-2:1-97 + | ----------------ACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG--CCAACCGAGAATTGTGGCTGGACATCTGTGGCTG---------AGCTCCGGG---------------------- |
| Homo_sapiens | hsa-mir-219-2:1-97 + | ----------------ACTCAGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG--CCAACCGAGAATTGTGGCTGGACATCTGTGGCTG---------AGCTCCGGG---------------------- |
| Mus_musculus | mmu-mir-219-1:1-110 + | --------------CCGTCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCT----CGAGTCTCTGGCTCCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGGGGG------------------ |
| Rattus_norvegicus | rno-mir-219-1:1-110 + | --------------CTGTCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCT----CGAGTCTCTGGCTCCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGGGGG------------------ |
| Macaca_mulatta | mml-mir-219-1:1-110 + | --------------CCGCCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCT----CGAGTCTATGGCTCTGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGGGGG------------------ |
| Pongo_pygmaeus | ppy-mir-219-1:1-110 + | --------------CCGCCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCT----CGAGTCTATGGCCCCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGCGGG------------------ |
| Gorilla_gorilla | ggo-mir-219:1-110 + | --------------CCGCCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCT----CGAGTCTATGGCTCCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGCGGG------------------ |
| Homo_sapiens | hsa-mir-219-1:1-110 + | --------------CCGCCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCT----CGAGTCTATGGCTCCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCCCCCAAACCTCGAGCGGG------------------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:9289926-9290048 - | GTG-------TGCCGCCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_simulans | chr3R_random:533427-533549 - | GTG-------TGCCGTCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_yakuba | chr3R:13598006-13598135 - | GTGCTAGATGTACGATGTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_eugracilis | scf7180000409802:705185-705307 + | ATA-------TCGTGTCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTGCAACAA------------AGAAA |
| D_elegans | scf7180000491047:1912675-1912796 + | GTG-------TATCAGTTACTTA------------------------------------------------C---CAAGTGCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAACAT------------T-GAA |
| D_ananassae | scaffold_13340:1848657-1848824 - | GAG-------T-------ACTTAGCCCCAACCATTGGTAAATATTGATTTTATACTTACATTA-CTTCCTGC---GAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGCAA------AATACAAGGAA |
| D_pseudoobscura | chr2:16736618-16736739 - | T-A-------TCTTGTGCATTTT------------------------------------------------G---GCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAG------------TGAAA |
| D_persimilis | super_0:3659179-3659300 + | T-A-------TCTTGTGCATTTT------------------------------------------------G---GCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAG------------TGAAA |
| D_willistoni | scaffold_181130:6363211-6363342 - | GAT-------GGATCAATACTTA-----------------------------------CTTGAA-------CGAAGCGTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTT------------GGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGACTTTACCTACTT------------AAAAA |
| D_virilis | scaffold_12855:2861518-2861626 + | T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTAGTTTTCCACCAGCAACAAT-T---AGAAA |
| D_grimshawi | scaffold_14906:3807816-3807948 - | TTG-------TGGCACTTACTT---------------------------------------GAGCTT-----GATGCGTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGAATTTTCCAACAA------TGT---GCGAG |
| Caenorhabditis_elegans | cel-mir-252:1-98 + | TCC-------AGGGGTCTCTT-------------------------------------------------------------TCAGTTATAAGTAGTAGTGCCGCAGGTAACCGCCAGTCT----AAAAGGCTTACCTACTGCCTTC-----------TGCTT---AAAATTG---------AAATAT------------TGATG |
| Caenorhabditis_briggsae | cbr-mir-252:1-99 + | AGG-------TCTCTCC------------------------------------------------------------------CAGTTATAAGTAGTAGTGCCGCAGGTAACCGCT--TCCAGAAAATTGGTTTACCTACTGCCTTCTGCTT--------------AGAATTGGGATTTTGATGACC-----------------G |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:8057863-8057982 - | AATCGAATCC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAA--C-TA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTGTGAG |
| D_simulans | chr2R_random:2148092-2148211 - | AATCGAATCC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAA--G-CA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTGTGAG |
| D_yakuba | chr2R:8893333-8893452 + | AATCGAATCC-------ATATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAT--T-CA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTATGAG |
| D_eugracilis | scf7180000409462:405753-405864 + | AA---AATTC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAAATT--C-AA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGCT----- |
| D_elegans | scf7180000491214:3592952-3593071 - | AATCCAAATCAAAATCTGAATGCGAATACGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAAGAA--TCCA----TTAA---ACACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGCTGCGCT----- |
| D_ananassae | scaffold_13266:2568740-2568853 + | CT---ATCTC-------GAATGCGAATACGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGATA--C-C-----TATA---ACACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGCTTCGCTCCGAT |
| D_pseudoobscura | chr3:418413-418523 - | AA---AACAC-------GAATGCGAATAGGT--GAATAAAGAGAGCTGTCCGTCGACAGTCAACGTA--CCAA----TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGC----AG |
| D_persimilis | super_2:605310-605420 - | AA---AACAC-------GAATGCGAATAGGT--GAATAAAGAGAGCTGTCCGTCGACAGTCAACGTA--CCAA----TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGC----AG |
| D_willistoni | scaffold_181141:3241875-3241979 + | AG---AA-----------AAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTTAAAC-GAT---TTTA---AAACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTGA--------C |
| D_virilis | scaffold_12875:19829913-19830024 + | AATCGTACCC-------AAAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTAA--C-AAA---TGTA---ATACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTTGCCC------ |
| D_grimshawi | scaffold_15245:18178188-18178294 + | AAT---TATG-------AAAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTAT--A-AAT---TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTTGC-------- |
| Caenorhabditis_elegans_1 | cel-mir-46:1-97 + | CT---GA---------------------GGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCAAGACCAC-GAGTCGTTGT---GTGCTGTCATGGAGTCGCTCTCTTCAGATGATC--CGGTC---------AAT |
| Caenorhabditis_elegans_2 | cel-mir-47:1-97 + | GA---GAGCC-------GACTG--------A--AACTGAAGAGAGCAGTCTATTGACAGTCGGT-TACTC-GAA---ATCT---TTACTGTCATGGAGGCGCTCTCTTCAGATGATGTCTGGCCC----------- |
| Caenorhabditis_briggsae_2 | cbr-mir-47:1-93 + | TA---GCTGA-------GG----------AA--GACTGAAGGGAGCTTTCTTTTGACAGTTCGATTT--C-GAA-------CTCTTACTGTCATGGAGGCGCTCTCTTCAGGTGAACTCTGGCTC----------- |
| Caenorhabditis_briggsae_1 | cbr-mir-46:1-94 + | GA---GATAC-------AA----------GTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCGCTT------G----TTTCAT-GTGCTGTCATGGAGTCGCTCTCTTCAGATGATCTGAATCTA----------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:8057643-8057764 - | CTTTCA----GATCCTCCGCGAATTGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AGACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-AT |
| D_simulans | zdp42d09.g1:294-416 + | CTTTCA----GATCCTCCGCGAATTGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AGACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-AT |
| D_yakuba | chr2R:8893539-8893660 + | CTTTCA----GATCCCCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----ATACCA---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAGGCGACGA--TT-AG |
| D_eugracilis | scf7180000409462:405955-406077 + | GTTCCA----GATCCTCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTGA----ATACTG---ATTATAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TG-AT |
| D_elegans | scf7180000491214:3592750-3592874 - | ATCCCA-AAGGACTTCCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AAACTG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-TC |
| D_ananassae | scaffold_13266:2568922-2569043 + | CCGCAA---GGATACTCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTAA-A--ACACGG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--T---- |
| D_pseudoobscura | chr3:418209-418322 - | TAT-------AATACTGAACGAATAGTGA-AATAAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----A-TCAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGA------- |
| D_persimilis | super_2:605106-605226 - | TTTTCTGTATAATACTGAACGAATAGTGA-AATAAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----A-TCAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGA------- |
| D_willistoni | scaffold_181141:3242068-3242181 + | TC-----------------CGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCC-AG-TTTAATACATCCGA---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAATCGACGG--TT-TT |
| D_virilis | scaffold_12875:19830099-19830219 + | CTAACC----AAAC--TTGCGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-CTA------TACAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGACTTT-AT |
| D_grimshawi | scaffold_15245:18178374-18178494 + | GTTTCA---CAACAAATTACGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTAT----ATACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGA--T---- |
| Caenorhabditis_elegans_1 | cel-mir-46:1-97 + | CTGA--------------------GGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCAAGACCA--------CGAGTCGTTGT-GTGCTGTCATGGAGTCGCTCTCTTCAGATGAT--CCG----------G--TCAAT |
| Caenorhabditis_elegans_2 | cel-mir-47:1-97 + | GAGAGC-------------CG---ACTGAAACTGAAGAGAGCAGTCTATTGACAGTCG--G-TTA-----C-TCGA---AATCT-TTACTGTCATGGAGGCGCTCTCTTCAGATGATGTCTGG-------------C-CC |
| Caenorhabditis_briggsae_2 | cbr-mir-47:1-93 + | TAGCTG-A----------------GGAAG-ACTGAAGGGAGCTTTCTTTTGACAGTTC-GA-TTT--------CGA---AC--TCTTACTGTCATGGAGGCGCTCTCTTCAGGTGAACTCTGG-------------C-TC |
| Caenorhabditis_briggsae_1 | cbr-mir-46:1-94 + | GAGATA-------------CA---AGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTC-GC-TTG--------------TTTCATGTGCTGTCATGGAGTCGCTCTCTTCAGATGATCTGA-----------A--TC-TA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:15401974-15402103 + | ----------------------AGAGAAA----AGTG-TCA---CCTCACACGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTGATCACCAT- |
| D_simulans | chrX_random:4022807-4022936 + | ----------------------AGAGAAA----AGTG-TCA---CCTCACACGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTGATCACCAT- |
| D_yakuba | chrX:9587590-9587719 + | ----------------------AGAGAAA----AGTG-TCA---CCTTACACGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTGATCACCAT- |
| D_eugracilis | scf7180000409533:551298-551429 + | ----------------------AGAGAAA----AGTGTCCA---CCTCACACGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAGATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTAATCACCAAA |
| D_elegans | scf7180000491023:1180304-1180433 - | ----------------------GGAGAAA----AGTG-TCA---CATCACACGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGTCTAAATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTTATCACCAA- |
| D_ananassae | scaffold_12929:2900376-2900509 - | ----------------------GTGTTAC----AGTGTTCACCACCTCACCTGATTCTTAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTGATTA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTCGAATTGCATTTTATCACCAA- |
| D_pseudoobscura | chrXL_group1a:976013-976147 + | ----------------------AGAGAAAGCGACGTC-ACGATTCACCTCACGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCA-AGATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTTATCACCA-- |
| D_persimilis | super_26:1090677-1090833 + | AGAGCGAACGAGAGAGAGTGCCAGAGAAAGCGACGTC-ACGATTCACCTCACGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCA-AGATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTTATCACCA-- |
| D_willistoni | scaffold_180702:1594772-1594907 - | ----------------------GAGTGCG----AGTGGGAGGGAGCCTAACGAATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAGATATTTGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTAATCACCAA- |
| D_virilis | scaffold_12970:2047646-2047770 + | ---------------------------AC----AA-G-ATGTCACCTCACCCGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCTAAATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTTATCACC--- |
| D_grimshawi | scaffold_14853:6953507-6953633 - | ---------------------------AG----AATG-ACGTCACCTCACCCGATTCTCAA--AGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCC-AAATA--TGAAACAC--------TCGGAATTTCAGTTGGTATCG-ACTTTTTTGAATTGCATTTTATCACCA-- |
| Mus_musculus | mmu-mir-216b:1-86 + | ------------------------------------------------------TTGGCAGACTGGGAAATCTCTGCAGGCAA--ATGTGA--TGTCACTGAAGA--AACCACAC------------ACTTACCTGTAG------AGATTCTTCAGTCTGACAA---------- |
| Rattus_norvegicus | rno-mir-216b:1-102 + | ------------------------------------------------TGCACGTTGGCAGACTGGGAAATCTCTGCAGGCAA--ATGTGA--TGTCACTGAAGA--AATCACAC------------ACTTACTTGTAG------AGATTCTTCAGTCTGACAACATCAAGCAT |
| Macaca_mulatta | mml-mir-216b:1-82 + | ------------------------------------G---------------------CAGACTGGAAAATCTCTGCAGGCAA--ATGTGA--TGTCACTGAAGA--AATCACAC------------ACTTACCCGTAG------AGATTCTACAGTCTGACA----------- |
| Pongo_pygmaeus | ppy-mir-216b:1-82 + | ------------------------------------G-------------CAGAC--------TGGAAAATCTCTGCAGGCAA--ATGTGA--TGTCACTGAAGA--AATCACAC------------ACTTACCCGTAG------AGATTCTACAGTCTGACA----------- |
| Homo_sapiens | hsa-mir-216b:1-82 + | ------------------------------------G-------------CAGAC--------TGGAAAATCTCTGCAGGCAA--ATGTGA--TGTCACTGAGGA--AATCACAC------------ACTTACCCGTAG------AGATTCTACAGTCTGACA----------- |
| Mus_musculus | mmu-mir-216a:1-72 + | -------------------------------------------------------------TTGGTTTAATCTCAGCTGGCAA--CTGTGAGATGTCCCTATC-A--TTCCTCACAGTGGTCTCTGGGATTATGCTAA------------------------------------ |
| Rattus_norvegicus | rno-mir-216a:1-106 + | -------------------------------------------------GTTAGCTATGAGTTAGTTTAATCTCAGCTGGCAA--CTGTGAGATGTCCCTATC-A--TTCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATTTCCTTGACCTC-------------- |
| Macaca_mulatta | mml-mir-216a:1-110 + | -------------------------------------------------GATGGCTGTGAGTTGGCTTAATCTCAGCTGGCAA--CTGTGAGATGTTCATACA-A--TCCCTCACAGTGGTCTCTGGGATTACGCTAAACAGAGCAATTTCCTTGCCCTCGCGA---------- |
| Pongo_pygmaeus | ppy-mir-216a:1-110 + | -------------------------------------------------GATGGCTGTGAGTTGGCTTAATCTCAGCTGGCAA--CTGTGAGATGTTCATACA-A--TCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATTTCCTTGCCCTCACGA---------- |
| Gorilla_gorilla | ggo-mir-216:1-110 + | -------------------------------------------------GATGGCTGTGAGTTGGCTTAATCTCAGCTGGCAA--CTGTGAGATGTTCATACA-A--TCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATTTCCTAGCCCTCACGA---------- |
| Homo_sapiens | hsa-mir-216a:1-110 + | -------------------------------------------------GATGGCTGTGAGTTGGCTTAATCTCAGCTGGCAA--CTGTGAGATGTTCATACA-A--TCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATTTCCTAGCCCTCACGA---------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:11939178-11939306 - | -----------------ACTTGCCCTGC-CACTTCGAATCGAAGAA-CTGAGATCGATTGGT-GCATAGATAT--CAGGAGA--ACCCACTCA-A--------TTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------ |
| D_simulans | chr3L:11307954-11308082 - | -----------------ACTTGCCCAGC-CACTTCGAATCGAAGAA-CTGAGATCGATTGGT-GCATAGATAT--CAGGAAA--ACCCACTCA-A--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------ |
| D_yakuba | chr3L:11984774-11984902 - | -----------------TCTTGCCCTAC-CACTTCGAATCGAAGAA-CTGAGATCGATTGGT-GCATAGATAT--CAAGACA--ACCCACTCA-A--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------ |
| D_elegans | scf7180000491193:3850551-3850671 - | ----------------------------CTTCTTCGAATCGAAGAA-CTGAGCTCGATTGGT-GCATAGATAT--CAAGGGA--ACCCGCTCA-T--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTCT----------- |
| D_eugracilis | scf7180000409466:4030533-4030653 - | ----------------------------TCACTTCGAATCGAAGAA-CTGAGATCGATTGGT-GCATAGATAT--CAAGGAA--ACATACTCA-T--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCCT----------- |
| D_ananassae | scaffold_13337:6191341-6191461 - | ----------------------GCCAGGATAATTCGAATCAAAGAA-CTGAGATCGATTGGT-GCATAGATAT--CAAGGAG--ATCCGATCA-T--------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA----------------- |
| D_pseudoobscura | chrXR_group6:1929779-1929903 - | ------------------TCTTACAATTACAGTTCGAATCGAAGAA-CTGAGATCGATTGGT-GCATAGATAT--CAAGAGG--ACTCGCTAATT--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA----------------- |
| D_persimilis | gnl|ti|738578230:636-763 + | -----------------TCTTACAATTTACAGTGGGAATCGAAGAACCTGAGATCGATTGGT-GCATAGATAT--CAAGAGG--ACTCGATAATT--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA----------------- |
| D_willistoni | scaffold_180949:5768880-5769006 + | ---------AC---------------AAATTGTTCGAATTAAAGAA-CTGAGATCGATTGGT-GCATAGATAA--TATGCGA--ATTCTATCATTTGATTTCATTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATTAGAACCAATCAACAAG----------------- |
| D_virilis | scaffold_13049:21101427-21101556 + | -------------------ATGCACCAGCCAGTTCAAATTGAAGAA-CTGAGATCGATTGGT-GCATAGATATCGCCCAAAA--AGTAATTCA-T--------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTCGAACCGATCAGCGGCGCATC------------ |
| D_grimshawi | scaffold_15110:22570097-22570226 - | -------------------ATGTAGCAGCCAGTTCAAATTGAAGAA-CTGAGATCGATTGGT-GCATAGATATCGTCCAAG---AATAATTTAAT--------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTGTATTGGAACCGATCAGCGGCGCATT------------ |
| Mus_musculus | mmu-mir-29b-2:1-81 + | -------------------------------------CTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTT-----------TTCCATC------------TTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAG--------------------------------- |
| Rattus_norvegicus | rno-mir-29b-2:1-81 + | -------------------------------------CTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTT-----------TTCCATC------------TTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAG--------------------------------- |
| Macaca_mulatta | mml-mir-29b-2:1-81 + | -------------------------------------CTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTT-----------TTCCATC------------TTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAG--------------------------------- |
| Pongo_pygmaeus | ppy-mir-29b-2:1-81 + | -------------------------------------CTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTT-----------TTCCATC------------TTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAG--------------------------------- |
| Gorilla_gorilla | ggo-mir-29b-2:1-81 + | -------------------------------------CTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTT-----------TTCCATC------------TTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAG--------------------------------- |
| Homo_sapiens | hsa-mir-29b-2:1-81 + | -------------------------------------CTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTT-----------TTCCATC------------TTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAG--------------------------------- |
| Mus_musculus | mmu-mir-29b-1:1-71 + | -----------------------------------------AGGAAGCTGGTTTCATATGGTGGTTTAGATTT-----------AAATAGTGA-T--------T----GTCTAGCACCATTTGAAATCAGTGTTCT-------------------------------------- |
| Rattus_norvegicus | rno-mir-29b-1:1-81 + | -------------------------------------CTTCAGGAAGCTGGTTTCATATGGTGGTTTAGATTT-----------AAATAGTGATT-------------GTCTAGCACCATTTGAAATCAGTGTTCTTGGTGG-------------------------------- |
| Macaca_mulatta | mml-mir-29b-1:1-81 + | -------------------------------------CTTCAGGAAGCTGGTTTCATATGGTGGTTTAGATTT-----------AAATAGTGA-T--------T----GTCTAGCACCATTTGAAATCAGTGTTCTTGGGGG-------------------------------- |
| Pongo_pygmaeus | ppy-mir-29b-1:1-81 + | -------------------------------------CTTCAGGAAGCTGGTTTCATATGGTGGTTTAGATTT-----------AAATAGTGA-T--------T----GTCTAGCACCATTTGAAATCAGTGTTCTTGGGGG-------------------------------- |
| Gorilla_gorilla | ggo-mir-29b-1:1-81 + | -------------------------------------CTTCAGGAAGCTGGTTTCATATGGTGGTTTAGATTT-----------AAATAGTGA-T--------T----GTCTAGCACCATTTGAAATCAGTGTTCTTGGGGG-------------------------------- |
| Homo_sapiens | hsa-mir-29b-1:1-81 + | -------------------------------------CTTCAGGAAGCTGGTTTCATATGGTGGTTTAGATTT-----------AAATAGTGA-T--------T----GTCTAGCACCATTTGAAATCAGTGTTCTTGGGGG-------------------------------- |
| Mus_musculus | mmu-mir-29c:1-88 + | ----------------------------ATCTCTTACACAGGCTGA-CCGATTTCTCCTGGT-GTTCAGA--------------GTCTG--------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA---------------------------- |
| Rattus_norvegicus | rno-mir-29c:1-88 + | ----------------------------ATCTCTTACACAGGCTGA-CCGATTTCTCCTGGT-GTTCAGA--------------GTCTG--------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA---------------------------- |
| Macaca_mulatta | mml-mir-29c:1-88 + | ----------------------------ATCTCTTACACAGGCTGA-CCGATTTCTCCTGGT-GTTCAGA--------------GTCTG--------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA---------------------------- |
| Pongo_pygmaeus | ppy-mir-29c:1-88 + | ----------------------------ATCTCTTACACAGGCTGA-CCGATTTCTCCTGGT-GTTCAGA--------------GTCTG--------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA---------------------------- |
| Gorilla_gorilla | ggo-mir-29c:1-112 + | -----------GGGAGCACCACTGGCCCATCTCTTACACAGGCTGA-CCGATTTCTCCTGGT-GTTCAGA--------------GTCTG--------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGAAAAGCAG--------------------- |
| Homo_sapiens | hsa-mir-29c:1-88 + | ----------------------------ATCTCTTACACAGGCTGA-CCGATTTCTCCTGGT-GTTCAGA--------------GTCTG--------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA---------------------------- |
| Mus_musculus | mmu-mir-29a:1-88 + | ------------------------------ACCCCTTAGAGGATGA-CTGATTTCTTTTGGT-GTTCAGA--------------GTCAATAGAAT--------TT----TCTAGCACCATCTGAAATCGGTTATAATGATTGGGGA---------------------------- |
| Rattus_norvegicus | rno-mir-29a:1-88 + | ------------------------------ACCCCTTAGAGGATGA-CTGATTTCTTTTGGT-GTTCAGA--------------GTCAATAGAAT--------TT----TCTAGCACCATCTGAAATCGGTTATAATGATTGGGGA---------------------------- |
| Macaca_mulatta | mml-mir-29a:1-64 + | ------------------------------------------ATGA-CTGATTTCTTTTGGT-GTTCAGA--------------GTCAATATAAT--------TT----TCTAGCACCATCTGAAATCGGTTAT---------------------------------------- |
| Pongo_pygmaeus | ppy-mir-29a:1-64 + | ------------------------------------------ATGA-CTGATTTCTTTTGGT-GTTCAGA--------------GTCAATATAAT--------TT----TCTAGCACCATCTGAAATCGGTTAT---------------------------------------- |
| Gorilla_gorilla | ggo-mir-29a:1-64 + | ------------------------------------------ATGA-CTGATTTCTTTTGGT-GTTCAGA--------------GTCAATATAAT--------TT----TCTAGCACCATCTGAAATCGGTTAT---------------------------------------- |
| Homo_sapiens | hsa-mir-29a:1-64 + | ------------------------------------------ATGA-CTGATTTCTTTTGGT-GTTCAGA--------------GTCAATATAAT--------TT----TCTAGCACCATCTGAAATCGGTTAT---------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19569882-19569987 - | TATTGGC-GCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_simulans | chr2L:19257947-19258052 - | TATTGGC-GCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_yakuba | chr2R:6066940-6067043 - | T--TGGC-GCATTCACGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_eugracilis | scf7180000409752:567590-567697 - | TATTGGC-GCATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTTT--TCCGCCTTGCGAGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_elegans | scf7180000491046:3394697-3394802 + | TATTGGC-GCATTCCTGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCCCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_ananassae | scaffold_12916:12013650-12013754 + | TATTGGC-ACATTCCTGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT----CCATTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTTATGTATCGTACA |
| D_pseudoobscura | chr4_group5:1152486-1152589 + | TATTGGC-ACATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT-----TGCTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTCGGCGTAATGTATCGTACA |
| D_persimilis | super_5:5559971-5560074 + | TATTGGC-ACATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT-----TGCTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTCGGCGTAATGTATCGTACA |
| D_willistoni | scaffold_180708:4284676-4284781 + | CA-CGAC-ACATTCATGCTGAGCTCACAAAGTGGTTGTGAAATGCATTAT---TTGCTTTATCCAGCATATCACAGCCAGCTTTGATGAGCTCTGCGTAATGTGAATTGCA |
| D_virilis | scaffold_12723:2960768-2960874 - | GATTGGC-ACATTCATGCTGCGCTCTCAAAGTGGTTGTGAAATGCATTTG--AAAGCTTTGCGC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTCACGTACA |
| D_grimshawi | scaffold_15126:521642-521748 + | T--TGGC-ACATTCATGCTGCGCTCTCAAAGTGGTTGTGAAATGCATTTTTGAAAGCTTTGCGC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTAAACTACt |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAA--ACAGTATACAG--AAAGCCATCAAAGCGGTGGTTG-ATGTGTTGC---AAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT--GCCTGTTGCACTGT--- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19569475-19569576 - | TGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_simulans | chr2L:19257527-19257628 - | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_yakuba | chr2R:6066549-6066650 - | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_eugracilis | scf7180000409752:567171-567272 - | CGC-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_elegans | scf7180000491046:3395094-3395195 + | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_ananassae | scaffold_12916:12013971-12014072 + | GGC-ACGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_pseudoobscura | chr4_group5:1153071-1153173 + | TATTATGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_persimilis | super_5:5560564-5560666 + | TATTATGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_willistoni | scaffold_180708:4285049-4285146 + | ------GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_virilis | scaffold_12723:2960501-2960597 - | ------GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCGACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_grimshawi | scaffold_15126:521944-522043 + | TTT---GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCGACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAGAACA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAA-ACAGTATA-----CAGAAAGC--CATCAAAGCGGTGGTTGATGTGTTGCAAATTATGAC--TTTCATATCACAGCCAGCTTTGATGTGCTGC-CTGTTGCACTG-----T |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:8258601-8258707 - | CAAAA----TAAC-------TAAAAACTTCAACTGTCTTCAAAGTGGCAG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCT----------------------CGTCCGGC |
| D_simulans | chr2L:8042700-8042806 - | CAAAA----GAAC-------TGAAAACTTCAACTGTCTTCAAAGTGGCGG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCA----------------------CGCCCGAC |
| D_yakuba | chr2L:10894231-10894336 - | GGAAA----AAG--------TGAAAACTTCAACTGTCTTCAAAGTGGCGG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCT----------------------CGCCAACC |
| D_eugracilis | scf7180000409461:268300-268413 - | AGAAGTGAAGGTGA---ATGTGAGAACTGCAACTGTCTTCAAGGTGGCGG-TGAAATGTTGTTAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTCTTTCTA----------------------ACTC-GA |
| D_elegans | scf7180000491338:639705-639825 + | TATAA----ATTAT---ATGTAAAAACTGCAACTGTCTTCAAGGTGGCGG-TGACATGTTGTTAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTCTTTTTATCTCCTTGA------------AATCGGGC |
| D_ananassae | scaffold_12916:6006043-6006142 + | CAGAT----TTTT----TT-AGGGAACTGCGACCCTCCTTAAAGTGGCGG-TGACATGTAGCTTTC----A------TA-TTCATATCACAGCTTTGCTTTCAGGAGC-----GTTGAGGTTTCTC------------------------------- |
| D_pseudoobscura | chr4_group3:3919027-3919154 + | CCCAT----GGGATACTATAGGAAAGCTGCGACGCTCTTTAAAGTGGCGG-TGACGTGTTGGTAATA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGCCCTTCTG--------AAAATATGCGCCTCATTGGGG |
| D_persimilis | super_1:5401823-5401939 + | CCCAT----GGGATACTATAGGAATGCTGCGACGCTCTTTAAAGTGGCGG-TGACGTGTTGGTAATA---A------TA-TTCATATCACAGCC-AGCTTTGA-GAGC-----GTTGCGGCCCTTCTG--------AA-AT---------ATGCGCC |
| D_willistoni | scaffold_180703:495398-495497 + | TGTAA----ATTA-------TAGAATTTATGATAGATTTTTAATCATGGT-TTGAGTCAAAATTAA----ACAAAAATAGTTTAAATAAAAGCA-AAT-ATA-GTAAT-----ATTTTTGTT---------------------------------TT |
| D_virilis | Unknown | ------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| D_grimshawi | scaffold_15252:13434449-13434542 - | TTCAA----TAGC----AA-GGAAATTCTTGGTTTTCTTTTGTTTATCGG-GAAAATGTTATATAA----A------CC-TATATATCTTT----ATCTCT----------------AGATCTCTCA----------------------CTATTTGC |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAAC----AGTATA---C-AGAAA---------GCCATCAAAGCGGTGGTTGATGTGTTGCAAATTATGA------CT-TTCATATCACAGCC-AGCTTTGATGTGCTGCCTGTT----------------------------------GCACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19570167-19570279 - | ATCGAAA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_simulans | chr2L:19258228-19258340 - | ATCGAAA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_yakuba | chr2R:6067209-6067321 - | ATCGAAG-----------------------------------------CAAGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTCTGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGACAAAAA- |
| D_eugracilis | scf7180000409752:567897-568009 - | ATCGAAG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_elegans | scf7180000491046:3394363-3394475 + | ATCGAAG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGACAAGAA- |
| D_ananassae | scaffold_12916:12013302-12013412 + | C----CA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCAAT-GCTCAAGACAAAAAA |
| D_pseudoobscura | chr4_group5:1152145-1152298 + | ACCCAAAGAACCCAAAGCCTCGGGTCTCGGGGCCCCCGTGTCCGGGCCAAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAAGACAAAAG- |
| D_persimilis | super_5:5559630-5559783 + | ACCCAAAGAACCCAAAGCCTCGGGTCTCGGGGCCCCCGTGTCCGGGCCAAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAAGACAAAAG- |
| D_willistoni | scaffold_180708:4283205-4283312 + | ---GAGG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCAATGGCTCAAGTTA----- |
| D_virilis | scaffold_12723:2961084-2961203 - | AGCGAGAGA----------------------------------GAGAGAAAGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTACTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAGCACAAAAA- |
| D_grimshawi | scaffold_15126:521314-521426 + | GAGAGAG-----------------------------------------AGAGAGAATTGTGTCCTTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTACTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAACACAAAAA- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TA---AA-----------------------------------------C---AGTATACAGAAAGCCATCAAAGCGGTGGTTGA-TGTGTTGCAAATTATGACT-TTCATATCACAGCCAGCTTTGATGTGCTGCCTGTT-GCACTGT-------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243451-11243582 - | TGCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGAT-AGCAAA-A------------------------------------------TG--------------TGACC |
| D_simulans | chr3R:10237596-10237727 + | TGCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGAT-AGCAAA-G------------------------------------------TG--------------TGACC |
| D_yakuba | chr3R:15188346-15188476 + | TTCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGTAA--G------------------------------------------TG--------------CGACC |
| D_eugracilis | scf7180000409281:109326-109438 + | TA--------------------TTCCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AAAAAGATATTTCTGCTTTT---GA--TTCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGCA------------------------------------------------------------------- |
| D_elegans | scf7180000491080:1007311-1007443 - | TGTGA-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGCATTTT------------------------------------------TG--------------TGACC |
| D_ananassae | scaffold_13340:12827820-12827951 - | TGCGTTT-----AG--CGACGTATCTACGAAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AG--AGATATTTCTGCATTT---GA--AGTGTATCACAGCCAGCTTTGATGGGCATTGCAATAAGCCTAGAT-TCCGATTG----------------------------------------------------------AA-AC |
| D_pseudoobscura | chr2:9824664-9824803 + | TGCGTGCGTGCTTGCGTATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGA------AGAAAGATATATTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-TGCAGTTT-------------------------------------------------------------CG |
| D_persimilis | super_0:10660285-10660410 - | TGCGT------------ATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGA------AGAAAGATATATTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-TGCAGTTT--------------------------------------------------------------- |
| D_willistoni | scaffold_181089:2143458-2143641 - | TGTGT---------------GTGAA-TTGCGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGTTTTGCATTTTTCCCCTCATTATTCGCCACACACTCTGGGAGTACCAGCCAACAGAGACAGAGAGCGAGCGAC- |
| D_virilis | scaffold_13047:13335413-13335531 + | TGT-----------------------ACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-------GAATGATATATCTGCAATT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAACG-T-AGCAGAAA------------------------------------------AG--------------TAACA |
| D_grimshawi | scaffold_14906:4357869-4357995 - | TGTGT-----------GTTTGTGTGTACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-------GAATGATATATCTGCAATT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAATG-T-AGCAAA-A------------------------------------------AG--------------AG--- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAAC-----------A-----------GTAT----A--CAGAAAGCCATCAAAGCGG----TGGTTGATG-------TGT-TGCAAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT--GCCTGT----------TGCACTGT--------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:5508741-5508858 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_simulans | chr2R:4140609-4140726 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAG--C |
| D_yakuba | chr2L:18140631-18140748 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_eugracilis | scf7180000409209:654058-654175 + | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_elegans | scf7180000491107:1596303-1596420 + | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAT--C |
| D_ananassae | scaffold_13266:12795467-12795585 - | AAGTTAG--CAG-------CCTTTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGA--C |
| D_pseudoobscura | chr3:14135687-14135806 - | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--C |
| D_persimilis | super_4:1183061-1183180 + | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--C |
| D_willistoni | scaffold_180701:3433650-3433765 - | ---TTAA--CA--------CA-TTTTGCCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTTAT-AATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--T |
| D_virilis | scaffold_12875:5789441-5789560 - | AAATAAACCGAA-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTAGTT-C-GATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAG--C |
| D_grimshawi | scaffold_15112:722942-723066 - | AAAATAA--AAGAACTAAACA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGA--A |
| Caenorhabditis_elegans | cel-mir-67:1-99 + | GATCAAA--GA-------------------TTCGTCGATCCGCTCATTCTGCCGGTTGTTATGCTATTA-T-CAGA--TTAAGCATCACAACCTCCTAGAAAGAGT-----------AGATCGATTTTAAAACTT |
| Caenorhabditis_briggsae | cbr-mir-67:1-95 + | TAGATA--------------------------TTTCGATCAACTCATTCTGCTGGTTGTTATGCTGACAATTGATG-ATTAAGCATCACAACCTCCTAGAAAGAGT-----------AGACCGATTCTATCT--T |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:13671285-13671406 - | CGATCGTATATC----AACTCCGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAGCGAG---ATC----------------------------------------- |
| D_simulans | chr2R:12409842-12409963 - | CGATCGTATAGC----ACCTCCGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAGCGAG---ATC----------------------------------------- |
| D_yakuba | chr2R:15512007-15512128 + | CGATCGTATAGC----ACCTCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------TCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CACTCAGCGAG---ATC----------------------------------------- |
| D_eugracilis | scf7180000409672:1435483-1435608 + | CGATCGTATACCCCAAAAATCTAT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTAAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATC----------------------------------------- |
| D_elegans | scf7180000491214:575197-575322 + | TGATCGTTAAAGCCTCACATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTAGA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATC----------------------------------------- |
| D_ananassae | scaffold_13266:10515593-10515725 + | CGATCATATAGCC-AAGAATCTGT-TGTTAAATTGGCAAGATGTCGGCATAGCTGACGTTGGA-------AAACG-AATTTTGA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATCGAAACT-------------------------C--------T |
| D_pseudoobscura | chr3:16483204-16483318 - | CGT------ACC----GCATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGAAGTTGAA-------AAGCG-ATCTTTGA--------------GA-----------ACGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAGTCAAC-AG---ATC----------------------------------------- |
| D_persimilis | super_4:278992-279106 + | CGT------ACC----GCATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGAAGTTGAA-------AAGCG-ATCTTTGA--------------GA-----------ACGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAGTCAAC-AG---ATC----------------------------------------- |
| D_willistoni | scaffold_180700:4557862-4557981 - | CATCATCATTA-----TCATCTGTTTTTCGAATTGGCAAGATGTCGGCATAGCTGA---TAAT-------------ATTTT--------------T---------AGAAAAGCGCTATGCT-GCATCTAGTCAGTTTATTCAATAG-AG----CAATCGACAATATTATC----------------------------------------- |
| D_virilis | scaffold_12875:16937652-16937767 - | TCGCCTC---------GCATCTGT-TGTTCAATTGGCAAGATGTCGGCATAGCTGACGTTTGA-------AAGCG-CATTTTTA--------------TA-----------GCGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAATCAACAAA---A------------------------------------------- |
| D_grimshawi | scaffold_15245:16476618-16476778 - | CTCTCGCGATTC----TCATCTGT-TGGTGAATTGGCAAGATGTCGGCATAGCTGACGTTTGA-------AAGCGCATCTT--A--------------TA-----------GCGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CACTCAAC-AT---ATCCATACCTGAAATGCTTAGAAACTTGGAGTATCTACGGATTA |
| Caenorhabditis_elegans | cel-mir-72:1-99 + | AGGTCCCGT----------------CAG-AGCTAGGCAAGATGTTGGCATAGCTGAA--TGAT---------------CGC--------------T----ATAACAACTATCAGCTTCGCC-ACATTCTGCCACG-CACTGATG-T-------GAG-------G---ACC----------------------------------------T |
| Caenorhabditis_briggsae | cbr-mir-72:1-123 + | TGGACTCGCC------------------CGAGCTAGGCAGATGTTGGCATAGCTGAAT--GCAAATCAGAAATCG-AAATTCGAAAAGTTTGAATTTCGC------GCGCTCAGCTTCGCC-ACATCGTGCCATG-CGTAGGCT-T---------------GAG---ACC----------------------------------------A |
| Mus_musculus | mmu-mir-31:1-106 + | TGCTCCTGTAACTCGG-----AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GAGAACCTGCTATGCCAACATATTGCCATC-TTTCCTGTCT-GA----CAGC-AG--------CT----------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-31b:1-118 + | TGGCCAAGCTGC----TGTCAGAC-AGGAAAGATGGCAATATGTTGGCATAGCAGG---TTCT-------------------------------CA---------GTTCAACAGCTATGCCAGCATCTTGCCTCC-TCTCCAGTTCCAAGTTTCAGG-AGCAAT---ACC----------------------------------------A |
| Rattus_norvegicus_2 | rno-mir-31a:1-106 + | TGCTCCTGAAACTTGG-----AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GAGAACCTGCTATGCCAACATATTGCCATC-TTTCCTGTCT-GA----CAGC-AG--------CT----------------------------------------- |
| Macaca_mulatta | mml-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:8887323-8887479 - | TCGCTCCACGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAACATTTT-ATCGTCCGAAAAAA---------------------TGTGATTATT-TTTG--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACTCTATCAGCGTTG |
| D_simulans | chrX:7083953-7084109 - | TCGCTCCTCGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCTCTT-ATCGTCCGAAAAAA---------------------TGTGATTATT-TTTG--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACGCTATCAACGTTG |
| D_yakuba | chrX:12425680-12425836 + | TTTCTCCTCGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCTTTG-ATCGTCCGAAAAAA---------------------TGTGAATATT-TTTT--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACTCTATCAGCGTTG |
| D_eugracilis | scf7180000408176:324239-324404 - | TTGATAAGCAT--C--AACTCCTAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGT-------TCGAGACTTTTCCTCAACCGGAAAAA---------------------TGTGAAAATTTTTTA--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTAAT-----TTGACACTATCAACGTGG |
| D_elegans | scf7180000491006:2391280-2391437 - | TGGCTCCTTAT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCAGTT-ATCGACCGAAAAAA---------------------TGTGAATATTT-TTGA-AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACACTATCAACGCGG |
| D_ananassae | scaffold_13047:712420-712562 - | ATCCTCG---------------AAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGAGGA-------TCGAGCGAGTC-ATCGACCGAG--------------------------------ACGAATTC--CA-A------AGCGGCTATGCCT-CATCTAGTCAATTACATTACT-----TTGACACTTTCCACGAGG |
| D_pseudoobscura | chrXL_group1e:8162325-8162445 - | GTGTCCT-----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA------------------------------------A------------------------GAAGATGATTTG--AA-A------TGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGATTCTATCAACGATG |
| D_persimilis | super_13:404315-404435 + | GTGTCCT-----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA------------------------------------A------------------------GAAGATGATTTG--AA-A------TGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGATTCTATCAACGATG |
| D_willistoni | scaffold_181150:794468-794638 + | TCACGAATG-----TG---ATGAAAACAACTAGTGGATTTGGCAAGATGTCGGAATAGCTGAAAGTCACACAAAATCATA-------------------------AAATGTTTGCCGTTTTGTTATTGTTGTGAATTT-TATTGATTT-CAAAAATTACGGCTATGCCT-CATCTAGTCAATTGCATTAGT-----TTGATTAAGTCAAC--TG |
| D_virilis | scaffold_12726:2775742-2775905 - | TTGCAGCACATATATATAAATATAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAAAG--TCATAAATCCAGAATT-------------------TCT---ATT---------TTGTGTATTTTTATTGAGTA-C------AGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGACAAAAGCAAC---G |
| D_grimshawi | scaffold_15203:6378282-6378443 - | TCGACCACCAT--TTGCACCCGCAAACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGACAG-CACAA--GATCACAAATCAAGAAAC-------------------TTT---ATT---------TTGTGTATTTTTATTGAGTA-C------AGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGAC---ATCAACAACG |
| Caenorhabditis_elegans | cel-mir-72:1-99 + | AGGTCCCGTC-----------------------AGAGCTAGGCAAGATGTTGGCATAGCTGAATG--------------------------------------------------------------------------AT-CGC-TATAACAACTATCAGCTTCGCCA-CATTCTGCCACG--CACTGAT-----GTGA--------GGACCT |
| Caenorhabditis_briggsae | cbr-mir-72:1-123 + | TGGACTCGCC-----------------------CGAGCTAGGC-AGATGTTGGCATAGCTGAATG-CAAATCAGA-----AATCGAAATTC----------GA-AAAG--TTTGA-ATT---------T-------------CGC-GC-G------CTCAGCTTCGCCA-CATCGTGCCATGCG--TAGGC-----TTGAGACC---------A |
| Mus_musculus | mmu-mir-31:1-106 + | TGCTCCTGTAA-CTCGG----------AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--AG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CCTGT-----------CTGACAGCAGCT |
| Rattus_norvegicus_1 | rno-mir-31b:1-118 + | TGGCCAAGCTG-----------CTGTCAGACAGGAAAGATGGCAATATGTTGGCATAGCAG---------------------------------------------------------------------------GTTCTCAG--TT-C------AACAGCTATGCCAGCATCTTGCCTCCTCT-CCAGTTCCAAGTTTCAGGAGCAATACCA |
| Rattus_norvegicus_2 | rno-mir-31a:1-106 + | TGCTCCTGAAA-CTTGG----------AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--AG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CCTGT-----------CTGACAGCAGCT |
| Macaca_mulatta | mml-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Pongo_pygmaeus | ppy-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Gorilla_gorilla | ggo-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Homo_sapiens | hsa-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:19791046-19791174 + | -----CTGAGTGCCACCAGAC--------TCTTCCT-CTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTG------------------TCCCAAT---TGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAAC------------GCCGAATG----------- |
| D_simulans | chr3L:19083102-19083230 + | -----CTGAGTGCCACCAGAC--------TCCTCCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTG------------------TCCCAAT---TGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAAC------------GCCGAATG----------- |
| D_yakuba | chr3L:20771315-20771443 - | -----CTGAGTGCCACCAGAC--------TCTTACT-CCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTG------------------TCCCAAT---TGCTTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAAC------------GCCGAGTG----------- |
| D_eugracilis | scf7180000409466:5133811-5133939 - | -----CCGAATGCCAGCAGGC--------TCTATCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTG------------------TTCCACT---TGCTTCAGGCAATACAACTTCAGTGCAAACTCTGTGCATTTCACAAA-CAAC------------GCCGACGG----------- |
| D_elegans | scf7180000491193:4070917-4071045 + | -----CCGGATGCCAGCAGAC--------TCTTCCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTG------------------TCCCACT---TGCCTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CATC------------GTCGACCG----------- |
| D_ananassae | scaffold_13337:19456783-19456919 - | -----CCGAATACCAGCAGACACTATACACCCGCCC-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTG------------------TCCCACT---TGCTCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAAC------------GCCAACTT----------- |
| D_pseudoobscura | chrXR_group6:5913809-5913939 + | -----AAAAACCAAACCAAAC------------ACTCCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTG--------------------TCCATCTTGATTTCAGGCAATACAACTGCAATGCAAGCTCTGTGCATTTCATAAATCAAC------------GCCGTCCAATG-------- |
| D_persimilis | super_47:413986-414116 + | -----AAAAACCAAACCAAAC------------ACTCCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTG------------------TCCATCTT--GATTTCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAAC------------GCCGTCCAATG-------- |
| D_willistoni | scaffold_180698:8572488-8572628 + | -----CGGAACCTAAACAAAT------------------TGAAGTTACACGAAGGTGCATTGTAGTCGCATTGTCTGTGCTCCAAAAAAAAAAAACCCCCAGTTTCTATTCAGGCAATACAACTGCAGTGCAAGCTTCGTGTGACTTATAAG-CAAC------------GGCAAATA----------- |
| D_virilis | scaffold_13049:22941104-22941227 - | -----CCAAAATCCGACATCT----------------CTGGAGCTGTTACGGAGGTGCATTGTAGTCGCATTGTCTG------------------TCTCAAA-TTTGCCCGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACACG-CAAC------------GTCGGAAG----------- |
| D_grimshawi | scaffold_15110:18214439-18214590 - | CTCTGCACAGTTAGGGCAGAC-----------ATCTCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTG-------------------TCCAAAAATTGCATGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTAG-CAACAACTCTTTGATCGCTGATCGATCTGA----- |
| Macaca_mulatta | mml-mir-33b:1-96 + | ---------------------------------------GCGGGCGGCCCCGCGGTGCATTGCTGTTGCATTGCACG----------------------------TGTGTGAGGCGG-----GTGCAGTGCCTCGGCAGTGCAGCCCGGAGC-CGGC------------CCCTGGCACCGC------- |
| Homo_sapiens | hsa-mir-33b:1-96 + | ---------------------------------------GCGGGCGGCCCCGCGGTGCATTGCTGTTGCATTGCACG----------------------------TGTGTGAGGCGG-----GTGCAGTGCCTCGGCAGTGCAGCCCGGAGC-CGGC------------CCCTGGCACCAC------- |
| Mus_musculus | mmu-mir-33:1-69 + | -------------------------------------------------CTGTGGTGCATTGTAGTTGCATTGCATG-------------------------------TTCTGGCAATACCTGTGCAATGTTTCCACAGTGCATCACGG--------------------------------------- |
| Rattus_norvegicus | rno-mir-33:1-69 + | -------------------------------------------------CCGTGGTGCATTGTAGTTGCATTGCATG-------------------------------TTCTGGCAGTACCTGTGCAATGTTTCCACAGTGCATCACGG--------------------------------------- |
| Macaca_mulatta | mml-mir-33a:1-69 + | -------------------------------------------------CTGCGGTGCATTGTAGTTGCATTGCATG-------------------------------TTCTGGTGGTACCCATGCAATGTTTCCACAGTGCATTACAG--------------------------------------- |
| Pongo_pygmaeus | ppy-mir-33a:1-69 + | -------------------------------------------------CTGCGGTGCATTGTAGTTGCATTGCATG-------------------------------TTCTGGTGGTACCCATGCAATGTTTCCACAGTGCATCACAG--------------------------------------- |
| Gorilla_gorilla | ggo-mir-33:1-69 + | -------------------------------------------------CTGTGGTGCATTGTAGTTGCATTGCATG-------------------------------TTCTGGTGGTACCCATGCAATGTTTCCACAGTGCATCACAG--------------------------------------- |
| Homo_sapiens | hsa-mir-33a:1-69 + | -------------------------------------------------CTGTGGTGCATTGTAGTTGCATTGCATG-------------------------------TTCTGGTGGTACCCATGCAATGTTTCCACAGTGCATCACAG--------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:5926643-5926771 + | --CAAACAA-GTATTCTTA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCA-ATT--ATTGCC--GTTGACAAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTAAAGCAACTTATAA--------------------- |
| D_simulans | chr3R:15449371-15449500 - | --CAATCAAAGTATTCTCA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCA-ATT--ATTGCC--GTTGACAAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTAAAGCAACTTATGG--------------------- |
| D_yakuba | chr3R:9974454-9974582 + | --CAATCAA-GTATTCTCA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCA-ATT--ATTGCC--GTTGACAAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTAAAGCAACGTACTC--------------------- |
| D_eugracilis | scf7180000409470:260340-260477 + | --AAATCAA-GTAACCTCA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCA-ATT---TTGCC--GTTGAAAAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTAAAGCAACG-ATAATGATAGTTTAT---------- |
| D_elegans | scf7180000490967:803608-803743 - | --CAATCAA-GTAACCTCA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCA-ATT--ATTGCC--GTTGACAAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTAAAGCAACG-ATAATGCTATAT------------- |
| D_ananassae | scaffold_13340:6489967-6490093 + | --TAATTCA-GTTACCTCA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCTGGTGCTCGTTG----GCAATTAAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTAGAGCAACTTA------------------------ |
| D_pseudoobscura | chr2:5019555-5019683 - | --AAATCCA-GAAAATTCA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCAAAAT--ATTGCC--TTTGACCAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCCATAACAACG-ATAA--------------------- |
| D_persimilis | super_19:724982-725124 - | --AAATCCA-GAAAATTCA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCAAAAT--ATTGCC--TTTGACCAT-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCCATAACAACG-ATAAGCAACATATAATCG------- |
| D_willistoni | scaffold_181089:11166523-11166648 - | ----------TAACATTCT-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTAGCCA-ATTAAATTGCCAAAACAATAAA-CCACAGCCACTATCTTCACTGCC-----GCCGCGACAGGCCATGACAACA-ATCGG-------------------- |
| D_virilis | scaffold_12855:2682541-2682664 - | --AAAAAAAATTACCTTAAATCCGATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTGGCCA--------------ATTGACAAA-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTATGACAGCAAAA----------------------- |
| D_grimshawi | scaffold_14624:2267430-2267555 + | --AAACCAAATTCCATTGA-----ATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTG---TGTGGCCA--------------ACTGACAAA-TCACAGCCACTATCTTCACTGCC-----GCCGCGACAAGCTATGACACCA-ATAAATATAA--------------- |
| Caenorhabditis_briggsae | cbr-mir-34:1-93 + | ----------AAGCACTCA-------TGGTCGTGAG----------GCAGTGTGGTTAGCTGGTTG---CATACACAGGT---------------------TGACAACGGCTACCTTCACTGCC-----ACCCCGAACATGTAGTCCTC---------------------------- |
| Caenorhabditis_elegans | cel-mir-34:1-97 + | -------------------------CGGACAATGCTCGAG----AGGCAGTGTGGTTAGCTGGTTGCA-TATTTCCT------------------------TGACAACGGCTACCTTCACTGCC-----ACCCCGAACATGTCGTCCATCTTTGAA--------------------- |
| Mus_musculus | mmu-mir-34c:1-77 + | --------------------------------AGTCTAGTTACTAGGCAGTGTAGTTAGCTGATTG--------------------------CTAATAG--TACCAATCACTAACCACACAGCC--------------AGGTAAAAAGACT-------------------------- |
| Rattus_norvegicus | rno-mir-34c:1-77 + | --------------------------------AGTCTAGTTACTAGGCAGTGTAGTTAGCTGATTG--------------------------CTAATAG--TACCAATCACTAACCACACAGCC--------------AGGTAAAAAGACT-------------------------- |
| Macaca_mulatta | mml-mir-34c:1-77 + | --------------------------------AGTCTAGTTACCAGGCAGTGTAGTTAGCTGATTG--------------------------CTGATAG--TACCAATCACTAACCACACGGCC--------------AGGTAAAAAGATT-------------------------- |
| Pongo_pygmaeus | ppy-mir-34c:1-77 + | --------------------------------AGTCTAGTTACTAGGCAGTGTAGTTAGCTGATTG--------------------------CTAATAG--TACCAATCACTAACCACACGGCC--------------AGGTAAAAAGATT-------------------------- |
| Gorilla_gorilla | ggo-mir-34c:1-108 + | ------------------------TTTCTATGAGTCTAGTTACTAGGCAGTGTAGTTAGCTGATTG--------------------------CTAATAG--TACCAATCACTAACCACACGGCC------AGGTAAAAAGATTTGGGAATTCGTCCAAATGAGCTG----------- |
| Homo_sapiens | hsa-mir-34c:1-77 + | --------------------------------AGTCTAGTTACTAGGCAGTGTAGTTAGCTGATTG--------------------------CTAATAG--TACCAATCACTAACCACACGGCC--------------AGGTAAAAAGATT-------------------------- |
| Mus_musculus | mmu-mir-34b:1-84 + | -------------------------------GTGCTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTGCGGTGC------------------------TGACAATCACTAACTCCACTGCC-----ATCAAAACAAGGCAC--------------------------------- |
| Rattus_norvegicus | rno-mir-34b:1-84 + | -------------------------------GTGCTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTGCGGTGC------------------------TGACAATCACTAACTCCACTGCC-----ATCAAAACAAGGCAC--------------------------------- |
| Macaca_mulatta | mml-mir-34b:1-84 + | -------------------------------GTGCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTGTGGTGG------------------------TTACAATCACTAACTCCACTGCC-----ATCAAAACAAGGCAC--------------------------------- |
| Pongo_pygmaeus | ppy-mir-34b:1-84 + | -------------------------------GTGCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTGTGATGG------------------------TTACAATCACTAACTCCACTGCC-----ATCAAAACAAGGCAC--------------------------------- |
| Gorilla_gorilla | ggo-mir-34b:1-110 + | ------------------------GTGCCCGGTGCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTGTGGTGG------------------------TTACAATCACTAACTCCACTGCC-----ATCAAAACAAGGCACAGCATCACCGCCGCCCGGC-------------- |
| Homo_sapiens | hsa-mir-34b:1-84 + | -------------------------------GTGCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTGTGGTGG------------------------TTACAATCACTAACTCCACTGCC-----ATCAAAACAAGGCAC--------------------------------- |
| Mus_musculus | mmu-mir-34a:1-102 + | -------------------------CCAGCTGTGAGTAATTCTTTGGCAGTGTC-TTAGCTGGTTGT--TGTGAGTA--------------TTAGCTAAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACATTGT--------------------------------- |
| Rattus_norvegicus | rno-mir-34a:1-102 + | -------------------------CCGGCTGTGAGTAATTCTTTGGCAGTGTC-TTAGCTGGTTGT--TGTGAGTA--------------TTAGCTAAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACGTTGT--------------------------------- |
| Macaca_mulatta | mml-mir-34a:1-110 + | -----------------------GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGT--TGTGAGCA---------------ATAGTAAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTACACATTGTGGGGCCT-------------------------- |
| Pongo_pygmaeus | ppy-mir-34a:1-110 + | -----------------------GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGT--TGTGAGCA---------------ATAGTAAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACGTTGTGGGGCCC-------------------------- |
| Gorilla_gorilla | ggo-mir-34a:1-110 + | -----------------------GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGT--TGTGAGCA---------------ATAGTAAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACGTTGTGGGGCCC-------------------------- |
| Homo_sapiens | hsa-mir-34a:1-110 + | -----------------------GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGT--TGTGAGCA---------------ATAGTAAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACGTTGTGGGGCCC-------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:857527-857647 + | CATCCGAAAC---CCCT---------------TC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_simulans | chr2L_random:38968-39087 + | CATCCGAATC---C-CT---------------CC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_yakuba | chr2L:841557-841670 + | CATCCGAGTC-----------------------C----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--G--------------CCTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_eugracilis | scf7180000409554:1584269-1584382 + | TATCACTAT-----------------------CC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C--------------GTTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCG-ATTAAATCGCCACGTGG-----------------T |
| D_elegans | scf7180000490458:433892-434014 - | ACTCCTTCA-AAA-------------------AA----------------------G-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTAAT--TGC---------AATGCTACAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTG-ATTTAAACGCCACGTGG-----------------T |
| D_ananassae | scaffold_12916:2746986-2747121 + | CCACGGAAA----------------------------AGACACCCCACGGAAACGAG-GGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAT--CGC---------AATGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-TTGCAAACGCCACGTGG-----------------T |
| D_pseudoobscura | chr4_group3:5649077-5649230 + | CATCCAAGGC---CTGTGCCTGTGT------CTG-AGAGCCCACCCACCCGAAT--A-GGGCAGCGAATTACTTGGGCCAGGGGAATTCAAACTGTGAT--CGC---------AATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTC-AAGTAAACGCCACGTGG----GT-----------T |
| D_persimilis | super_1:7140235-7140385 + | CATCCAAGGC---CTGTGCCTGTGC------TTG-AGAGCCCACCCACCCGAAT--A-AGGCAGCGAATTACTTGGGCCAGGGGAATGCAAACTGTGAT--CGC---------AATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTC-AAGTAAACGCCACGTGG------------------ |
| D_willistoni | scaffold_180772:2278802-2278947 - | AATTTAAAAC---CGTTTTCCATTTCATTTTTTG----------------------G-GGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAA--T---TATTTCAAAATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTACAATTGCGACACGTGG-----------------T |
| D_virilis | scaffold_12963:19405390-19405507 + | CATTCAAAG-----------------------TT----------------------C-GGGCAGCAAATTACTTGGGCCAAGGGAATGCAAACTGTCAA--CGC---------ATTGCAATAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCA-AC-ATAACGCCACGTGG-----------------T |
| D_grimshawi | scaffold_15252:7270330-7270448 + | C---------------------------------------------------------GGGCAGCGAATTACTTGGGCCAAGTGGATGTAAACTGTGAAAGCGCATTTTGCATATAACAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCG-AT-ATAACGCCACGTGG-----------------G |
| Mus_musculus | mmu-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Rattus_norvegicus | rno-mir-375:1-75 + | TCCG----------------------------GCC----------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGTGA----------------------------GGCAGGGG-----------C |
| Macaca_mulatta | mml-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Pongo_pygmaeus | ppy-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Gorilla_gorilla | ggo-mir-375:1-112 + | CGACCGCCA-GGCCCCGG-GCCCTCCGCTCCCGCC----------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGTGA----------------------------GGCAGGGGCGGCCTCTCAGC |
| Homo_sapiens | hsa-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:16493557-16493674 + | ---GATTGGTCCTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-TTTGTGCTCTTCATTCTA---------- |
| D_simulans | chr2R:15154934-15155051 + | ---GATTGGTCCTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-TTTGTGCTCTTCATTCTA---------- |
| D_yakuba | chr2R:12702727-12702844 - | ---GACTGGTCCTCCTGGGAGTGCATTTCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-TTTGTGCTCTTCATTCTA---------- |
| D_eugracilis | scf7180000409474:1467534-1467651 - | ---GATTGGCTCTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-CCTGTGCTCTGCATTCTA---------- |
| D_elegans | scf7180000491201:759743-759860 + | ---GATTGGCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-TTTGTGCTCTTCATTCTG---------- |
| D_ananassae | scaffold_13266:4109353-4109468 - | ----TGGGAGTCCTGTGGAAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTTTATGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-TTC-GGCTCATCACTCTA---------- |
| D_pseudoobscura | chr3:8655644-8655762 - | --GATTGGCCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-TCTGTGCTCTTCATTCTA---------- |
| D_persimilis | super_4:2540080-2540198 - | --GATTGGCCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCA-TCTGTGCTCTTCATTCTA---------- |
| D_willistoni | scaffold_180700:3423572-3423692 - | ---AAATTGTGTGTGGTGGAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTAATAAAATTAACAATAAATCCCTTGTCTTCTTATGGCGTGTATTTAAAGCTCTTCATTTG----------- |
| D_virilis | scaffold_12823:2295157-2295274 - | ---------GTCGTCTCCAAATGCTTTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCGCGCA-TTC-TGCTCTTCATTTATAATAATT--- |
| D_grimshawi | scaffold_15245:15782213-15782323 + | --------------GTTTAAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTAA---TAACAATAAATCCCTTGTCTCCTAACGGCGCGCA-TTG-TGCTCTTCATTATTTCTTA----- |
| Macaca_mulatta | mml-mir-7-2:1-110 + | -CTGGATACAGAGTGAAGTGGCTGGCCCCGTCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGCT---CAACAACAAATCCCAGTCTGCCGAATGGTGCCAG-CCA-----TTGCA--------------- |
| Pongo_pygmaeus | ppy-mir-7-2:1-110 + | -CTGGATACAGAGTGGACCGGCTGGCCCCGTCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGCT---CAACAACAAATCCCAGTCTGCCTAATGGTGCCAG-CCA-----TCGCA--------------- |
| Gorilla_gorilla | ggo-mir-7-2:1-110 + | -CTGCATACAGAGTGGACCGGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGCT---CAACAACAAATCCCAGTCTGCCTAATGGTGCCAG-CCA-----TCGCA--------------- |
| Homo_sapiens | hsa-mir-7-2:1-110 + | -CTGGATACAGAGTGGACCGGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGCT---CAACAACAAATCCCAGTCTACCTAATGGTGCCAG-CCA-----TCGCA--------------- |
| Mus_musculus | mmu-mir-7a-2:1-97 + | --------------GGTCGGGCCAGCCCCGTTTGGAAGACTAGTGATTTTGTTGTTGTGTCTCTGTATC---CAACAACAAGTCCCAGTCTGCCACATGGTGCTGG-TCA-----TTTCA--------------- |
| Rattus_norvegicus | rno-mir-7a-2:1-95 + | --------------GGACAGACCAGCCCTGTCTGGAAGACTAGTGATTTTGTTGTTGTGTCTGTGTC-----CAACAACAAGTCCCAGTCTGCCACATGGTGTTGG-TCA-----CATCA--------------- |
| Mus_musculus | mmu-mir-7a-1:1-108 + | ---------TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAA-AACGACAACAAATCACAGTCTGCCATATGGCACAGG-CCA--CCTCTACAG-------------- |
| Rattus_norvegicus | rno-mir-7a-1:1-97 + | --------------TGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAA-GACGACAACAAATCACAGTCTGCCATATGGCACAGG-CCA----CCT------------------ |
| Macaca_mulatta | mml-mir-7-1:1-110 + | ---------TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAA-ATTGACAACAAATCACAGTCTGCCATATGGCACAGG-CCATGCCTCTACAG-------------- |
| Pongo_pygmaeus | ppy-mir-7-1:1-110 + | ---------TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAA-ATCGACAACAAATCACAGTCTGCCATATGGCACAGG-CCATGCCTCTACAG-------------- |
| Gorilla_gorilla | ggo-mir-7-1:1-110 + | ---------TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAA-ATCGACAACAAATCACAGTCTGCCATATGGCACAGG-CCATGCCTCTACAG-------------- |
| Homo_sapiens | hsa-mir-7-1:1-110 + | ---------TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAA-ATCGACAACAAATCACAGTCTGCCATATGGCACAGG-CCATGCCTCTACAG-------------- |
| Mus_musculus | mmu-mir-7b:1-111 + | ---AGGAGCGGAGTACGTGAGCCAGTGCTATGTGGAAGACTTGTGATTTTGTTGTTCTGA-TATGATA----TGACAACAAGTCACAGCCAGCCTCATAGCGTGGA-CTC----CTATCACCTT----------- |
| Rattus_norvegicus | rno-mir-7b:1-110 + | ----AGGCCAGAACACATGAGCCAATGCTATGTGGAAGACTTGTGATTTTGTTGTTCTGA-TATGATA----TGACAACAAGTCACAGCCAGCCTCATAGAGTGGA-CTC----CCATCACCTT----------- |
| Macaca_mulatta | mml-mir-7-3:1-110 + | --AGATTAGAGTGGCTATGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGA-TGTGCTA----CGACAACAAATCACAGCCGGCCTCATAGCGCAGA-CTC----CCTTCGAC------------- |
| Pongo_pygmaeus | ppy-mir-7-3:1-110 + | --AGATTAGAGTGGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGA-TGTACTA----TGACAACAAGTCACAGCCGGCCTCATAGCGCAGA-CTC----CCTTCGAC------------- |
| Gorilla_gorilla | ggo-mir-7-3:1-110 + | --AGACTGGAGTGGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGA-TGTACTA----CGACAACAAGTCACAGCCGGCCTCACAGCGCAGA-CTC----CCTTCGAC------------- |
| Homo_sapiens | hsa-mir-7-3:1-110 + | --AGATTAGAGTGGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGA-TGTACTA----CGACAACAAGTCACAGCCGGCCTCATAGCGCAGA-CTC----CCTTCGAC------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16698539-16698665 + | -----------------ATGAGTGCCTT-A--------GAGTGAAGCTGA-------------CTTGCCATTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTAAACTAC--TTCATAAAGCTAGATTACCAAAGCATTGGC-TTCTGCA-GGTCAATCGTCA--G--------AAACAAT-- |
| D_simulans | wck39a12.g1:600-726 - | -----------------ATGAGTGCGTC-A--------GAGTGTAGCTGA-------------CTTACCATTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTAAACTAC--TTCATAAAGCTAGATTACCAAAGCATTGGC-TTGTGCA-GATCAATCGTCA--G--------AAACAA--- |
| D_yakuba | chr2R:4404406-4404531 - | -----------------ATAAGTGAATTGA--------GAGTGTAGCTGC-------------CTTGCCATTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTATACTAC--TTCATAAAGCTAGATTACCAAAGCATTGGC-TTCTGCA-GATCAATCATCA------------GACAAA-- |
| D_eugracilis | scf7180000408961:272475-272601 + | -----------------ACAAGTGATTAAA---------AGAGAAACTGC-------------TCTGCCGTTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTAAACTAC--TTCATAAAGCTAGATTACCAAAGCATTGGC-TTTGGTA-GATCAATCATCA--A--------AAATAAC-- |
| D_elegans | scf7180000490579:645389-645516 - | -----------------AAAAGTGTTTAAA--------GAATGTGGCTGC-------------TTGACCGTTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTAAACTAC--TTCATAAAGCTAGATTACCAAAGCATTGGC-TTTTGCA-GATCAATCATCC--A--------AAATAAG-- |
| D_ananassae | scaffold_12916:15864702-15864823 - | -----------------TATAGTGTTCTAT--------------AGCTGC-------------TTAACCGATGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTAAA-TAC--TTCATAAAGCTAGATTACCAAAGCATTGGC-TTCCGCA-GGCCTGTCTTCA-AG--------GAATAAA-- |
| D_pseudoobscura | chr4_group3:8443957-8444103 + | -----------------GAAAGTGTTTAAAAGTACAACAATCTAATCTGTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTAAAATAC--TTCATAAAGCTAGATTACCAAAGCATTGGC--TCTGTGGAAACTTCATCCA------------AACAAT-- |
| D_persimilis | super_1:9895076-9895222 + | -----------------GAAAGTGTTTAAAAGTACGACAATCTAATCTGTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTAAAATAC--TTCATAAAGCTAGATTACCAAAGCATTGGC--TCTGTGGAAACTTCATCCA------------AACAAT-- |
| D_willistoni | scaffold_181061:28846-28963 - | ---------------------GTAATGGAT--------------AATGGT-------------CTTGCCTATGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTT-GACTAC--TTCATAAAGCTAGATTACCAAAGCATGGGC-TCTGGCTGACTTAATCAACG--C--------AAGTGTT-- |
| D_virilis | scaffold_12963:12863019-12863151 - | -----------------ATAGCCAGGATTA--------GATGAACGCCGC-------------ACTGCCGTTGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTGAA-TAC--TTCATAAAGCTAGATTACCAAAGCATTGGCTCTGTGGCCAGCTTAGCAAAG------TTGTGAAACGAT-- |
| D_grimshawi | scaffold_14978:831072-831198 + | --------------ATTTAAAG----------------------TGCTTCTTCTTGGTGCCACATTGCCGTCGCTTTGGCGCTTTAGCTGT-ATGATAG-ATTTGAA-TAC--TTCATAAAGCTAGATTACCAAAGCATCGGC-GCCTGTG-GCCAGCTTAACA------------AACGTT-- |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | -----------------AGAA-----------------------CATTCT------------------CCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGACGTC--TTCATAAAGCTAGGTTACCAAAGCTCGGCGTTCCAGT-----------TCG-------------------- |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | --------------------------------------------TAGTAG-----------ACATTCTCCGATCTTTGGTGATTCAGCTTCAATGATTG-GCTACAGGTTTCTTTCATAAAGCTAGGTTACCAAAGCTCGGCG-TCTT----GATCTAC------------------------- |
| Mus_musculus | mmu-mir-9-3:1-90 + | -----------------GGAGGCC--------------------CGTTTC--------------------TCTCTTTGGTTATCTAGCTGT-ATGAGTG-CCACAGAGC-C--GTCATAAAGCTAGATAACCGAAA------------GTAGAAATGACTCTCA-------------------- |
| Rattus_norvegicus | rno-mir-9a-3:1-90 + | -----------------GGAGGCC--------------------CGTTTC--------------------TCTCTTTGGTTATCTAGCTGT-ATGAGTG-CCACAGAGC-C--GTCATAAAGCTAGATAACCGAAA------------GTAGAAATGACTCTAA-------------------- |
| Pongo_pygmaeus | ppy-mir-9-3:1-90 + | -----------------GGAGGCC--------------------CGTTTC--------------------TCTCTTTGGTTATCTAGCTGT-ATGAGTG-CCACAGAGC-C--GTCATAAAGCTAGATAACCGAAA------------GTAGAAATGACTCTCA-------------------- |
| Homo_sapiens | hsa-mir-9-3:1-90 + | -----------------GGAGGCC--------------------CGTTTC--------------------TCTCTTTGGTTATCTAGCTGT-ATGAGTG-CCACAGAGC-C--GTCATAAAGCTAGATAACCGAAA------------GTAGAAATGATTCTCA-------------------- |
| Mus_musculus | mmu-mir-9-1:1-89 + | -----------------CGGGGTT--------------------GGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-GTGTGGAGT-C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAATAACCCCA-------------------- |
| Rattus_norvegicus | rno-mir-9a-1:1-89 + | -----------------CGGGGTT--------------------GGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-GTGTGGAGT-C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAATAACCCCA-------------------- |
| Macaca_mulatta | mml-mir-9-1:1-89 + | -----------------CGGGGTT--------------------GGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-GTGTGGAGT-C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAATAACCCCA-------------------- |
| Pongo_pygmaeus | ppy-mir-9-1:1-89 + | -----------------CGGGGTT--------------------GGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-GTGTGGAGT-C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAATAACCCCA-------------------- |
| Homo_sapiens | hsa-mir-9-1:1-89 + | -----------------CGGGGTT--------------------GGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-GTGTGGAGT-C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAATAACCCCA-------------------- |
| Mus_musculus | mmu-mir-9-2:1-72 + | ---------------------------------------------GTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-TATTGGT---C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAAC--------------------------- |
| Rattus_norvegicus | rno-mir-9a-2:1-87 + | -----------------GGAAGCG--------------------AGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-TATTGGT---C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAACTCCTTCA-------------------- |
| Macaca_mulatta | mml-mir-9-2:1-87 + | -----------------GGAAGCG--------------------AGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-TATTGGT---C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAACTCCTTCA-------------------- |
| Pongo_pygmaeus | ppy-mir-9-2:1-87 + | -----------------GGAAGTG--------------------AGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-TATTGGT---C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAACTCCTTCA-------------------- |
| Gorilla_gorilla | ggo-mir-9:1-87 + | -----------------GGAAGCG--------------------AGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-TATTGGT---C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAACTCCTTCA-------------------- |
| Homo_sapiens | hsa-mir-9-2:1-87 + | -----------------GGAAGCG--------------------AGTTGT--------------------TATCTTTGGTTATCTAGCTGT-ATGAGTG-TATTGGT---C--TTCATAAAGCTAGATAACCGAAA------------GTA-AAAACTCCTTCA-------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:12718922-12719038 + | -----------------------------------------ATCT-------------TGC-------TAAT--TAGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TTT--ATAACTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTAACCTTCAGTACCAC--- |
| D_simulans | chr2R:11454608-11454724 + | -----------------------------------------ATCT-------------TGC-------TAAT--TAGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TTT--ATAACTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTAACCTTCAGTACCAC--- |
| D_yakuba | chr2R:16257218-16257334 - | -----------------------------------------ATCT-------------TGC-------TAAT--TAGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TTT--ATAACTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTAACCTTCAGTAGCAC--- |
| D_elegans | scf7180000491214:1652880-1652996 - | -----------------------------------------AACT-------------TGC-------TAAT--TAGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TTG--ATAACTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTAACCTTCAGTACGAA--- |
| D_eugracilis | scf7180000409672:2416246-2416361 - | -----------------------------------------AACT-------------TGC-------TAAT--TAGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TTCTTATAACTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTAACCTTCAGTAC------ |
| D_ananassae | scaffold_13266:13876642-13876748 - | -----------------------------------------ATCT-------------TGC-------TTAT--TTGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TCT-GATAACTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTAACC-------------- |
| D_pseudoobscura | Unknown_singleton_1898:47537-47693 - | AAATAACAAAAGAGGGAAACACAGTGCGGTGACGAAAACACGTTT-------------TGC-------TAT---TCGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TAG--ATACCTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTATCCATCATAAATCC--- |
| D_persimilis | super_4:6545710-6545866 + | AAATAACAAAAGAGGGAAACACAGTGCGGTGACGAAAACACGTTT-------------TGC-------TAT---TCGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATCCT-T--TAG--ATACCTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTATCCATCATAAATCC--- |
| D_willistoni | scaffold_180700:6381462-6381593 + | -----------------------------------------CGCT-------------TGCAAAAAGATTCTTCTTGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATTTTGTACTATAGATATCTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTATCCATCATAAATCAT-- |
| D_virilis | scaffold_12875:10672387-10672513 - | -----------------------------------------ATCTGTTTGCTTGCAATTAC-------TTAT--TTGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATTCT-TGATTTAAATAATTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTATACATCA---------- |
| D_grimshawi | scaffold_15245:3783124-3783258 - | ----------------------ATTTTTATGTGAAATAATCAATT-------------TGC-------------TTGCAAGGACATCTGTTCA-CATCTTACC-GGGCAGCA-TTAGATTCT-TGATTTAAATAATTCTAATACTGTCAGGTAAAGATGTC----GTCCGTGTCCTTATCCATCATAAATC---- |
| Caenorhabditis_briggsae | cbr-mir-236:1-100 + | -----------------------------------------AAGT------------------------------------GACCAATGTCCAGCGTCTTACCTGTTCAATATTTAGACTGA-CCAAACCCATAGCTCTAATACTGTCAGGTAATGACGCTGGATAGTCTTGTCATTG----------------- |
| Caenorhabditis_elegans | cel-mir-236:1-98 + | ----------------------------------------------------------------------------TCGGTGACCGATGTCCAGCGTCTTACCTGTTCAATATTTAGACTGACT--ATCAAAGAGATCTAATACTGTCAGGTAATGACGCTGGATTGTCATGTCAT------------------- |
| Mus_musculus | mmu-mir-429:1-83 + | ----------------------------------------------------------------------------------CCTGCTGATGGATGTCTTACC-AGACATGG-TTAGATCTG----GATGCATCTGTCTAATACTGTCTGGTAATGCCGTC---CATCCACGGC--------------------- |
| Rattus_norvegicus | rno-mir-429:1-85 + | --------------------------------------------------------------------------------TGCCTGCTGATGGATGTCTTACC-AGACATGG-TTAGATCTG----GATGTATCTGTCTAATACTGTCTGGTAATGCCGTC---CATCCATGGC--------------------- |
| Macaca_mulatta | mml-mir-429:1-83 + | ----------------------------------------------------------CGC----------------------CGGCCGATGAGCGTCTTACC-AGACACGG-TTAGACCTGGCTCTCT------GTCTAATACTGTCTGGTAAAACCGTC---CATCCGCGGC--------------------- |
| Pongo_pygmaeus | ppy-mir-429:1-80 + | --------------------------------------------------------------------------------CGCCGGCCGATGGGCGTCTTACC-AGACATGG-TTAGACCTGGCCGTCT------GTCTAATACTGTCTGGTAAAACCGTC---CATCCGC------------------------ |
| Gorilla_gorilla | ggo-mir-429:1-111 + | ------------------------------------------------------------CCGGAGGCCACCCACACCACCGCCGGCCGATGGGCGTCTTACC-AGACATGG-TTAGACCTGGCCCTCT------GTCTAATACTGTCTGGTAAAACCGTC---CATCAGCCGCCTGATCAC------------- |
| Homo_sapiens | hsa-mir-429:1-83 + | --------------------------------------------------------------------------------CGCCGGCCGATGGGCGTCTTACC-AGACATGG-TTAGACCTGGCCCTCT------GTCTAATACTGTCTGGTAAAACCGTC---CATCCGCTGC--------------------- |
| Mus_musculus | mmu-mir-200c:1-69 + | -----------------------------------------CCCT-------------------------------------------------CGTCTTACC-CAGCAGTGTTTGGGTGCTG---GTTGGGAGTCTCTAATACTGCCGGGTAATGATGGA----GG---------------------------- |
| Rattus_norvegicus | rno-mir-200c:1-69 + | --------------------------------------------------------------------------------------CCCT----CGTCTTACC-CAGCAGTGTTTGGGTGCTG---GTTGGGAGTCTCTAATACTGCCGGGTAATGATGGA----GG---------------------------- |
| Macaca_mulatta | mml-mir-200c:1-68 + | -----------------------------------------CCCT-------------------------------------------------CGTCTTACC-CAGCAGTGTTTGGGTGCG----GTTGGGAGTCTCTAATACTGCCGGGTAATGATGGA----GG---------------------------- |
| Pongo_pygmaeus | ppy-mir-200c:1-68 + | -----------------------------------------CCCT-------------------------------------------------CGTCTTACC-CAGCAGTGTTTGGGTGCG----GTTGGGAGTCTCTAATACTGCCGGGTAATGATGGA----GG---------------------------- |
| Gorilla_gorilla | ggo-mir-200c:1-67 + | ------------------------------------------CCT-------------------------------------------------CGTCTTACC-CAGCAGTGTTTGGGTGCG----GTTGGGAGTCTCTAATACTGCCGGGTAATGATGGA----GG---------------------------- |
| Homo_sapiens | hsa-mir-200c:1-68 + | -----------------------------------------CCCT-------------------------------------------------CGTCTTACC-CAGCAGTGTTTGGGTGCG----GTTGGGAGTCTCTAATACTGCCGGGTAATGATGGA----GG---------------------------- |
| Mus_musculus | mmu-mir-200b:1-70 + | ----------------------------------------------------------------------------GCCGTGGC----------CATCTTACT-GGGCAGCA-TTGGATAGTGT--CTG----ATCTCTAATACTGCCTGGTAATGATGAC----GGC--------------------------- |
| Rattus_norvegicus | rno-mir-200b:1-95 + | ------------------------------------------------------------C-------------CAACTTGGGCAGCCGTGGC-CATCTTACT-GGGCAGCA-TTGGATAGTGT--CTG----ATCTCTAATACTGCCTGGTAATGATGAC----GGCGGAGCCCTGCACG-------------- |
| Gorilla_gorilla | ggo-mir-200b:1-111 + | --------------------------------CGGCCCCCGGACC-----------------------------CAGCTCGGGCAGCCGTGGC-CATCTTACT-GGGCAGCA-TTGGATGGAGT------CAGGTCTCTAATACTGCCTGGTAATGATGAC----GGCGGAGCCCTGCACG--CAGC-------- |
| Homo_sapiens | hsa-mir-200b:1-95 + | ------------------------------------------------------------C-------------CAGCTCGGGCAGCCGTGGC-CATCTTACT-GGGCAGCA-TTGGATGGAGT------CAGGTCTCTAATACTGCCTGGTAATGATGAC----GGCGGAGCCCTGCACG-------------- |
| Pongo_pygmaeus | ppy-mir-141:1-95 + | --------------------------------------------------------------------------TGGCCGGC---CCTGGGTT-CATCTTCCA-GTACAGTG-TTGGATGGTCTAATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGC----CCCCGGGTGGGTTC---------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:9950403-9950531 - | CCAA-AG-------TCC-T-TT--GG-CAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTG-CCATTATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC----GGAGAA--TTT |
| D_simulans | chr2L:9739846-9739974 - | CTTA-AG-------TCC-T-TT--GG-CGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTG-CCATCATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC----GGAGGA--TTT |
| D_yakuba | chr2L:12640967-12641095 - | TCCA-AG-------TCC-T-TT--GG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CAATTATGGTCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATC----GGAGGA--TTT |
| D_eugracilis | scf7180000409554:4961907-4962035 + | TTTA-AG-------TCC-T-TT--AG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCATATTGGCCCAAG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATC----GAAGGA--TTT |
| D_elegans | scf7180000491186:3003977-3004106 - | AGC-----------TCC-T-TT--GG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCATATTGGCCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATC----CAAAAAAGTGT |
| D_ananassae | scaffold_12916:13789760-13789886 - | TGA---A-------TCC-T-TTCAAG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCGATATGGCACAGA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC----AAAAGA--T-- |
| D_pseudoobscura | chr4_group3:220105-220226 + | TCCT-A---------CCGT-GT--GC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAG-CCATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC----AC--------- |
| D_persimilis | super_1:1694906-1695025 + | TCCT-A---------CCGT-GT--GC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAG-CCATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC--------------- |
| D_willistoni | scaffold_180708:12250833-12250971 - | CCAA-TCAAAATTAACA-T-TT--GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATC----GTTGGA--ATA |
| D_virilis | scaffold_12723:3996238-3996344 + | CTA-----------TCC-C-TT--GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CAATTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT--------------------------- |
| D_grimshawi | scaffold_15252:3661296-3661426 - | TTA-----------TCC-T-TG--AC-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCATTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACTTGGTGGA--TAG |
| Caenorhabditis_elegans | cel-mir-87:1-94 + | GGTTGTG-------CCA-T-CC--GG-CCGCCTGATACTTT--CGTCTCAACCTCGCTG---------TCAGATTGGTCG-------TAGGTGAGCAAAGTTTCAGGTGTGCCGGAACACACC--------------------------C |
| Caenorhabditis_briggsae | cbr-mir-87:1-95 + | GGTTGTG-------C---CCACCCGG-CCGCCTGATACTTT--CGTCTCAACCTCGCTG---------TCAGAATG--------TCGTAGGTGAGCAAAGTTTCAGGTGTGCCGGAACACACCCA------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:21472213-21472337 + | ------------TTTCAGCCGAATATAA----------------------ATA---TGAATTTCCCGTAGGACGGGA-AGGTGTCAACGTTTTGCATTTCGAA-TAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----ATAAACAACT----------------------AAAATCTATAAA------------- |
| D_simulans | chr3R:21300457-21300581 + | ------------TTTCAGCCGAATAAAA----------------------ATA---TGAATTTCCCGTAGGACGGGA-AGGTGTCAACGTTTTGCATTTCGAA-TAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----ATAAACAACT----------------------AAAATCAATAAA------------- |
| D_yakuba | chr3R:25001360-25001484 - | ------------TTTCGTTCGAATATGA----------------------ATA---TGAATTTCCCGTAGGACGGGA-AGGTGTCAACGTTTTGCATTTTGAA-TAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----ATAAACAACT----------------------AAAATGCATTTT------------- |
| D_eugracilis | scf7180000409682:1157943-1158071 - | ------------TTTCAGCCGAATATGA----------------------ATA---TGAATTTCCCGTAGGACGGGA-AGGTGTCAACGTTTTGCATTTTTAA-TAAACATTGCACTTGTCCCGGCCTATGGGCGATTTGTA-----ATAATCGCCG----------------------TAAATATATCTATATA--------- |
| D_elegans | scf7180000491280:3186428-3186546 + | ------------TTTCTGGGGAATATG-----------------------------TGAATTTCCCGTAGGACGGGA-AGGTGTCAACGTTTTGCATTATGAA-TAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----A-AAACAACG----------------------TGGATAACAGA-------------- |
| D_ananassae | scaffold_13340:3727762-3727906 + | ------------TTTCCATCGAATAT-A----------------------ATA---CAAATTTCCCGTAGGACGGGA-AGGTGTCAAGGTTTTGAATTA-AAT-TAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTC-----AAACACATCGATACATATTTTTAGAAATATTTAAAATTTGGATA------------- |
| D_pseudoobscura | chr2:23635253-23635419 - | CTTTATATGCATATCCTGTAGGACAAGACTACAGTACTACTCGGAATACCATA---GAGATTGCCCGTAGGACGGGA-AGGTGTCAACGTTTTAAATTTTGAA-CAAACATTGCACTTGTCCCGGCCTATGGGCGGCTTGTC-----ATACACATCG------------------ATCGTACAACTAGCAACAAA--------- |
| D_persimilis | super_3:6410293-6410459 - | CTTTATATGCATATCCTGTAGGACAAGACTACAGTACTACTCGGAATACCATA---GAGATTGCCCGTAGGACGGGA-AGGTGTCAACGTTTTACATTTTGAA-CAAACATTGCACTTGTCCCGGCCTATGGGCGGCTTGTC-----ATACACATCG------------------ATCGTACAACTAGCAACAAA--------- |
| D_willistoni | scaffold_181130:14578411-14578543 - | ------------CTGTAGCCGGGTGAAACATTATCTGCATT---------------CAAATTTCTCGTAGGACGGGA-AGGTGTCAACGTTTTGCCTTATGAATCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGTAAAACGACATCCTATC----------------------AAAA--------------------- |
| D_virilis | scaffold_12855:6880771-6880902 + | -----------------CGACAATATGG--------------------CTTTATCACAAACTGCTTGCAGGACGGGA-AGGTGTCAACGTTTTGCTTTATGAATCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGTGCCACAACAAACGATT----------------------GAAAATATGAAAA------------ |
| D_grimshawi | scaffold_14906:3023231-3023367 + | -----------TTTTTTAATATATATAT------------TCTTAAACGTGTACCATAAATTGCTTGCAGGACGGGA-AGGTGTCAACGTTTTGCATTTTGAATCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGTGCATCTACAACTGGTT----------------------TAAA--------------------- |
| Mus_musculus | mmu-mir-25:1-84 + | -----------------GGCCAGTGTTG--------------------------------------AGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCC--TGGGCATTGCACTTGTCTCGGTCTGACAGTG----------------CCGGCC----------------------------------------------- |
| Rattus_norvegicus | rno-mir-25:1-84 + | -----------------GGCCAGTGTTG--------------------------------------AGAGGCGGAGACACGGGCAATTGCTGGACGCTGCCC--TGGGCATTGCACTTGTCTCGGTCTGACAGTG----------------CCGGCC----------------------------------------------- |
| Macaca_mulatta | mml-mir-25:1-84 + | -----------------GGCCAGTGTTG--------------------------------------AGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCC--TGGGCATTGCACTTGTCTCGGTCTGACAGTG----------------CCGGCC----------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-25:1-84 + | -----------------GGCCAGTGTTG--------------------------------------AGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCC--TGGGCATTGCACTTGTCTCGGTCTGACAGTG----------------CCGGCC----------------------------------------------- |
| Gorilla_gorilla | ggo-mir-25:1-84 + | -----------------GGCCAGTGTTG--------------------------------------AGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCC--TGGGCATTGCACTTGTCTCGGTCTGACAGTG----------------CCGGCC----------------------------------------------- |
| Homo_sapiens | hsa-mir-25:1-84 + | -----------------GGCCAGTGTTG--------------------------------------AGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCC--TGGGCATTGCACTTGTCTCGGTCTGACAGTG----------------CCGGCC----------------------------------------------- |
| Mus_musculus | mmu-mir-92b:1-83 + | -----------------GGTGGGCGGGA----------------------------------------GGGACGGGACGTGGTGCAGTGTTGTTCTTTCCCCTGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCTCG---------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-92b:1-83 + | -----------------GGTGGGCAGGA----------------------------------------GGGACGGGACGCGGTGCAGTGTTGTTCTTTCCCCTGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCTCG---------------------------------------------------------------- |
| Macaca_mulatta | mml-mir-92b:1-96 + | --------CGGGCCCCGGGCGGGCGGGA----------------------------------------GGGACGGGACGCGGTGCAGTGTTGTTCTTTCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCCCGGCCC------------------------------------------------------------ |
| Pongo_pygmaeus | ppy-mir-92b:1-96 + | --------CGGGCCCCGGGCGGGCGGGA----------------------------------------GGGACGGGACGCGGTGCAGTGTTGTTTTTTCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCTCCGGCCC------------------------------------------------------------ |
| Homo_sapiens | hsa-mir-92b:1-96 + | --------CGGGCCCCGGGCGGGCGGGA----------------------------------------GGGACGGGACGCGGTGCAGTGTTGTTTTTTCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCCCGGCCC------------------------------------------------------------ |
| Mus_musculus | mmu-mir-92a-1:1-80 + | ----------------------------------------------------------CTTTCTACACAGGTTGGGATTTGTCGCAATGCTGTGTTTCTCTGT-ATGGTATTGCACTTGTCCCGGCCTGTTGA--GTTTGG--------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-92a-1:1-78 + | ----------------------------------------------------------CTTTCTACACAGGTTGGGATTTGTCGCAATGCTGTGTTTCTGTAT---AGTATTGCACTTGTCCCGGCCTGTTGA--GTTTGG--------------------------------------------------------------- |
| Macaca_mulatta | mml-mir-92a-1:1-78 + | ----------------------------------------------------------CTTTCTACACAGGTTGGGATCGGTTGCAATGCTGTGTTTCTGTAT---GGTATTGCACTTGTCCCGGCCTGTTGA--GTTTGG--------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-92-1:1-78 + | ----------------------------------------------------------CTTTCTACACAGGTTGGGATCGGTTGCAATGCTGTGTTTCTGTAT---GGTATTGCACTTGTCCCGGCCTGTTGA--GTTTGG--------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-92-1:1-78 + | ----------------------------------------------------------CTTTCTACACAGGTTGGGATCGGTTGCAATGCTGTGTTTCTGTAT---GGTATTGCACTTGTCCCGGCCTGTTGA--GTTTGG--------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-92a-1:1-78 + | ----------------------------------------------------------CTTTCTACACAGGTTGGGATCGGTTGCAATGCTGTGTTTCTGTAT---GGTATTGCACTTGTCCCGGCCTGTTGA--GTTTGG--------------------------------------------------------------- |
| Mus_musculus | mmu-mir-92a-2:1-91 + | -----------------------------------------------------TGCCCATTCATCCACAGGTGGGGATTGGTGGCATTACT-TGTGTTAGATATAAAGTATTGCACTTGTCCCGGCCTGAGGAAG------------AAAGAGGGTT----------------------------------------------- |
| Rattus_norvegicus | rno-mir-92a-2:1-92 + | -----------------------------------------------------TGCCCATTCATCCACAGGTGGGGATTAGTGCCATTACT-TGTGTTAGATAAAAAGTATTGCACTTGTCCCGGCCTGAGGAAGA-----------AAAGAGGGTT----------------------------------------------- |
| Macaca_mulatta | mml-mir-92a-2:1-75 + | ------------------------------------------------------------TCATCCCTGGGTGGGGATTTGTTGCATTACT-TGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA-------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-92-2:1-75 + | ------------------------------------------------------------TCATCCCTGGGTGGGGATTTGTTGCATTACT-TGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA-------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-92-2:1-75 + | ------------------------------------------------------------TCATCCCTGGGTGGGGATTTGTTGCATTACT-TGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA-------------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-92a-2:1-75 + | ------------------------------------------------------------TCATCCCTGGGTGGGGATTTGTTGCATTACT-TGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA-------------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:21477105-21477234 + | -----AGTGCAG-TGGTACATTAAA---ACGTCACCTGATGTAGGCCGTGCCCAGTGCTTA---TTTGTTGCATT-------TTCGAAATACAA-ATTGCACTAGTCCCGGCCTG-CAATGAGTGTCGCAGTCGACGATCTAC--------------------------------------------------------AC-AGTGCA------------------ |
| D_simulans | chr3R:21305387-21305516 + | -----AGTGCAG-TGGTACATTAAA---ACGTCACCTGATGTAGGCCGTGCCCAGTGCTTA---TTTGTTGCCTT-------TTCGAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGTGAGTGTCGCAGTCGACGATCTAC--------------------------------------------------------AC-AGTGCA------------------ |
| D_yakuba | chr3R:24996445-24996574 - | -----AGTGCAG-TGGTACATTAAA---ACGTCACCTGATGTAGGCCGTGCCCAGTGCTTA---TTTGTTGCCTT-------TTCGAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGTGAGTGTCGCAGTCAGCGATCTGC--------------------------------------------------------AC-AGTGCG------------------ |
| D_eugracilis | scf7180000409682:1152385-1152514 - | -----AGTGCAG-TGGTACATTAAA---ACGTCACCTGATGTAGGCCGTGCCCAGTGCTTA---TTTGTTGCTGT-------TTGGAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGTGAGTGTCGCAGTCAACGATCTAC--------------------------------------------------------AC-GGCCAA------------------ |
| D_elegans | scf7180000491280:3191448-3191577 + | -----AGTGCAG-TGGTACATTAAA---ACGTCACCTGATGTAGGCCGTGCCCAGTGCTTA---TTTGTTGCTGT-------TTGGAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGTGAGTGTCGGAGTCAACGATCTAC--------------------------------------------------------AC-GTAGGG------------------ |
| D_ananassae | scaffold_13340:3732627-3732749 + | -----AGTGCAG-TGAAGCATTAAA---ACGTCACCTGATGTAGGCCGTGCCCGGTGCTTA---TTTGTTACT-T-------TTGGAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGTGAGTGTCAAAGGCAGCTATCTTC--------------------------------------------------------AC------------------------- |
| D_pseudoobscura | chr2:23630755-23630875 - | ------GTACAGTTGGAGCATTAAA---ACGTCACCTGATGTAGGCCGTGCCCAGTGCTTA---TTTGTCGTTGT-------TTGAAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGAGAGTGTCGCACACAACGAGCT------------------------------------------------------------------------------------- |
| D_persimilis | super_3:6405653-6405778 - | AGTGCAGTACAGTTGGAGCATTAAA---ACGTCACCTGATGTAGGCCGTGCCCAGTGCTTA---TTTGTCGTTGT-------TTGAAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGAGAGTGTCGCACACAACGAGCT------------------------------------------------------------------------------------- |
| D_willistoni | scaffold_181130:14574160-14574279 - | ----TGCGGAAATTGTATCTTTAAAAATACGTCACATGATGTAGACCGTGCCTGGTGCTTA---TTTGTTGCTAT-------TTAAATATACAA-ATTGCACTAGTCCCGGCCTG-CAGTAAGTGTCGCAAACAAC------------------------------------------------------------------------------------------ |
| D_virilis | scaffold_12855:6883792-6883910 + | -----AGTGGTG-TGCAACATTAAA---ACGTCACCTGATGTAGGTCGTGCCTGGTGCTTA---TTTGTTGTTAT-------GCGAAAATCCAA-ATTGCACTAGTCCCGGCCTG-CAGTGAGTGTCGCAGCCAACGTTC-------------------------------------------------------------------------------------- |
| D_grimshawi | scaffold_14906:3026528-3026659 + | --AGTGATGTGG-TGCAACATTAAA---ACGTCACCTGATGTAGGTCGTGCCTGGTGCTTA---TTTGTTGTTAT-------GTGAAAATACAA-ATTGCACTAGTCCCGGCCTG-CAGTGAGTGTCGCAAACAACAAACAACAACAGCA---------------------------------------------------------------------------- |
| Mus_musculus | mmu-mir-25:1-84 + | -----------------------GGCCAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGG----ACGCTGCCCT----------------GGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCC--------------------------------------------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-25:1-84 + | ----GGCCAGTGTTGAGAGGCGGAGACACGGGCAATTGCTGGA-----------------------CGCTGCCCT----------------GGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCC--------------------------------------------------------------------------------------------------- |
| Macaca_mulatta | mml-mir-25:1-84 + | -----------------------GGCCAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGG----ACGCTGCCCT----------------GGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCC--------------------------------------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-25:1-84 + | -----------------------GGCCAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGG----ACGCTGCCCT----------------GGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCC--------------------------------------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-25:1-84 + | -----------------------GGCCAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGG----ACGCTGCCCT----------------GGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCC--------------------------------------------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-25:1-84 + | -----------------------GGCCAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGG----ACGCTGCCCT----------------GGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCC--------------------------------------------------------------------------------------------------- |
| Mus_musculus | mmu-mir-92b:1-83 + | --------------GGTGGGCGGGAGGGACGGGACGTGGTGCAG----------------------TGTTGTTCT-------TTCCCCTGCCAATATTGCACTCGTCCCGGCCTC-CGGCCCCCTCG--------------------------------------------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-92b:1-83 + | --------------GGTGGGCAGGAGGGACGGGACGCGGTGCAG----------------------TGTTGTTCT-------TTCCCCTGCCAATATTGCACTCGTCCCGGCCTC-CGGCCCCCTCG--------------------------------------------------------------------------------------------------- |
| Macaca_mulatta | mml-mir-92b:1-96 + | ----CGGGCCCC-GGGCGGGCGGGAGGGACGGGACGCGGTGCAG----------------------TGTTGTTCT-------TTCCCCCGCCAATATTGCACTCGTCCCGGCCTC-CGGCCCCCCCGGCCC----------------------------------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-92b:1-96 + | -----CGGGCCCCGGGCGGGCGGGAGGGACGGGACGCGGTGCAG----------------------TGTTGTTTT-------TTCCCCCGCCAATATTGCACTCGTCCCGGCCTC-CGGCCCCTCCGGCCC----------------------------------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-92b:1-108 + | ---CCGGGCCCC-GGGCGGGCGGGAGGGACGGGACGCGGTGCAG----------------------TGTTGTTTT-------TTCCCCCGCCAATATTACACTCGTCCCGGCCTC-CGGCCCCCCCGGCCCCCCGGCCTCCC------------------------------------------------------------------------------------ |
| Homo_sapiens | hsa-mir-92b:1-96 + | -----CGGGCCCCGGGCGGGCGGGAGGGACGGGACGCGGTGCAG----------------------TGTTGTTTT-------TTCCCCCGCCAATATTGCACTCGTCCCGGCCTC-CGGCCCCCCCGGCCC----------------------------------------------------------------------------------------------- |
| Mus_musculus | mmu-mir-92a-1:1-80 + | --------------------------------CTTTCTACACAGGTTGGGA-------------TTTGTCGCAATGCTGTGTTTCTCTGTATGGTATTGCACTTGTCCCGGCCTG---TTGAGTTTGG-------------------------------------------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-92a-1:1-78 + | --------------------------------CTTTCTACACAGGTTGGGATTTGTCGCAATGCTGTGTTTCTGT---------------ATAGTATTGCACTTGTCCCGGCCTG---TTGAGTTTGG-------------------------------------------------------------------------------------------------- |
| Macaca_mulatta | mml-mir-92a-1:1-78 + | --------------------------------CTTTCTACACAGGTTGGGATCGGT--------TGCAATGCTGT-------GTTTCTGTATGGTATTGCACTTGTCCCGGCCTG---TTGAGTTTGG-------------------------------------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-92-1:1-78 + | --------------------------------CTTTCTACACAGGTTGGGATCGGT--------TGCAATGCTGT-------GTTTCTGTATGGTATTGCACTTGTCCCGGCCTG---TTGAGTTTGG-------------------------------------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-92-1:1-78 + | --------------------------------CTTTCTACACAGGTTGGGATCGGT--------TGCAATGCTGT-------GTTTCTGTATGGTATTGCACTTGTCCCGGCCTG---TTGAGTTTGG-------------------------------------------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-92a-1:1-78 + | --------------------------------CTTTCTACACAGGTTGGGATCGGT--------TGCAATGCTGT-------GTTTCTGTATGGTATTGCACTTGTCCCGGCCTG---TTGAGTTTGG-------------------------------------------------------------------------------------------------- |
| Mus_musculus | mmu-mir-92a-2:1-91 + | --------------TGCCCAT-------TCATCCACAGGTGGGG----------------A---TTGGTGGCATTACTTGTGTTAGATATAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAAGAGGGTT----------------------------------------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-92a-2:1-92 + | -------------TGCCCAT--------TCATCCACAGGTGGGGATTAGTGCCATTACTTG---TG----------------TTAGATAAAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAAAGAGGGTT---------------------------------------------------------------------------------------------- |
| Macaca_mulatta | mml-mir-92a-2:1-75 + | ----------------------------TCATCCCTGGGTGGGG----------------A---TTTGTTGCATTACTTGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTG-TGGAAGA------------------------------------------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-92-2:1-75 + | ----------------------------TCATCCCTGGGTGGGG----------------A---TTTGTTGCATTACTTGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTG-TGGAAGA------------------------------------------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-92-2:1-75 + | ----------------------------TCATCCCTGGGTGGGG----------------A---TTTGTTGCATTACTTGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTG-TGGAAGA------------------------------------------------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-92a-2:1-75 + | ----------------------------TCATCCCTGGGTGGGG----------------A---TTTGTTGCATTACTTGTGTTCTATATAAAGTATTGCACTTGTCCCGGCCTG-TGGAAGA------------------------------------------------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:19558216-19558323 + | CTCT------ATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCAGCGAGA------ |
| D_simulans | chr3L:18890412-18890519 + | CTCT------ATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAA------ |
| D_yakuba | chr3L:20989402-20989507 - | CTC--------TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAA------ |
| D_eugracilis | scf7180000409472:104906-105011 + | CTA--------TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCAGCGAAA------ |
| D_elegans | scf7180000491249:6855005-6855110 + | CTC--------TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCAGCGAAA------ |
| D_ananassae | scaffold_13337:17332424-17332537 - | ATCTTATATAACACTATGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAA------ |
| D_pseudoobscura | chrXR_group8:7634812-7634919 + | TTCT------TCAATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAA------ |
| D_persimilis | super_48:412952-413059 + | TTCT------TCAATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAA------ |
| D_willistoni | scaffold_180727:842215-842322 + | CCCTCGC---ATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TACATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCATC---A------ |
| D_virilis | scaffold_13049:13137002-13137114 + | CGACCAGCCAGGATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCAACGTA------- |
| D_grimshawi | scaffold_15110:23882734-23882841 + | TGCC------GCATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA---TAAATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCAACGTAA------ |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AG----------------AACATTCTCCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGACGT-CTTCATAAAGCTAGGTTACCAAAGCTCGGCGTT--------CCAG-TTCG------ |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAG--------TA-----GACATTCTCCGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGGTTTCTTTCATAAAGCTAGGTTACCAAAGCTCG-----GCGTCTT--GAT-CTAC------ |
| Mus_musculus | mmu-mir-9-3:1-90 + | GGA---------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC---CACAGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAC-T---------CTCA------ |
| Rattus_norvegicus | rno-mir-9a-3:1-90 + | GGA---------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC---CACAGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAC-T---------CTAA------ |
| Macaca_mulatta | mml-mir-9-3:1-90 + | GGA---------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC---CACAGAGCCGCTCTCAAGCTAGATAACCGAAAGTAGAAATGAC-T---------CTCA------ |
| Pongo_pygmaeus | ppy-mir-9-3:1-90 + | GGA---------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC---CACAGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAC-T---------CTCA------ |
| Homo_sapiens | hsa-mir-9-3:1-90 + | GGA---------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC---CACAGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAT-T---------CTCA------ |
| Mus_musculus | mmu-mir-9-1:1-89 + | CG---------------GGGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG---TGTGGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------CCCA------ |
| Rattus_norvegicus | rno-mir-9a-1:1-89 + | CG---------------GGGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG---TGTGGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------CCCA------ |
| Macaca_mulatta | mml-mir-9-1:1-89 + | CG---------------GGGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG---TGTGGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------CCCA------ |
| Pongo_pygmaeus | ppy-mir-9-1:1-89 + | CG---------------GGGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG---TGTGGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------CCCA------ |
| Homo_sapiens | hsa-mir-9-1:1-89 + | CG---------------GGGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG---TGTGGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------CCCA------ |
| Mus_musculus | mmu-mir-9-2:1-72 + | G-----------------------TTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG----TATTGGT-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC------------------------ |
| Rattus_norvegicus | rno-mir-9a-2:1-87 + | GGA---------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG----TATTGGT-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------TTCA------ |
| Macaca_mulatta | mml-mir-9-2:1-87 + | GGA---------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG----TATTGGT-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------TTCA------ |
| Pongo_pygmaeus | ppy-mir-9-2:1-87 + | GGA---------------AGTGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG----TATTGGT-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------TTCA------ |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GGA---------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG----TATTGGT-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------TTCA------ |
| Homo_sapiens | hsa-mir-9-2:1-87 + | GGA---------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG----TATTGGT-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------TTCA------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16698729-16698849 + | TGTTGCTC------------T-TTTGTTTGCATATTATTTGCTCTTTGGTGATTTTAGCT-GTATGGTGTT-TATGT--AT--ATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---G-TTTGAGTT----------------GA |
| D_simulans | vom21g07.g1:730-849 + | TGTTGCTC------------T-TTTGTTTGCATATTATTTGCTCTTTGGTGATTTTAGCT-GTATGGTGTA-TAAG--T----ATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---G-CTTGAGTT----------------GA |
| D_yakuba | chr2R:4404225-4404345 - | GGTTGCTC------------T-TTTGTTTGCATATTATTTGCTCTTTGGTGATTTTAGCT-GTATGGTGTG-TTTAT--GT--GTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---G-CTTGAGTT----------------GA |
| D_eugracilis | scf7180000408961:272643-272761 + | AGTTGCCT------------T-TTTGTTTGCATATTATTTGTTCTTTGGTGATTTTAGCT-GTATGGTTGT-TTTTA-A----TATCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCGTT-AT---T-CTTGAGTT----------------G- |
| D_elegans | scf7180000490579:645222-645340 - | AGTTCTTC------------T-TTTGTTTGCATATTATTTGCTCTTTGGTGATTTTAGCT-GTATGGTGTG-TCTA--A----GTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---G-CTTAGTTT----------------GT |
| D_ananassae | scaffold_12916:15864526-15864643 - | AGTTGCTC------------T-TTTGTTTGCACATTATTTGTTCTTTGGTGATTTTAGCT-GTATGGTG-T-CTCA--T----ATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---T-TCTGAGTT----------------GC |
| D_pseudoobscura | chr4_group3:8444179-8444302 + | AGTTGATC------------T-TTTGTTTGCACATTATTTGATCTTTGGTGATTTTAGCT-GTATGGTGTA-TATCAAA----GATCCATAGAGCTTTATCACCAAAACCCAAATGGTTT-TTGCATT-TTTTCG-CTTGAGTT----------------GC |
| D_persimilis | super_1:9895298-9895421 + | AGTTGATC------------T-TTTGTTTGCACATTATTTGATCTTTGGTGATTTTAGCT-GTATGGTGTA-TATCAAA----GATCCATAGAGCTTTATCACCAAAACCCAAATGGTTT-TTGCATT-TTTTCG-CTTGAGTT----------------GC |
| D_willistoni | scaffold_181132:873333-873452 - | ATTGATTT------------T-GATTTTCGCATATTATTTGGTCTTTGGTGATTTTAGCT-GTATGGTGTA-TGAGCAT----AATCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---G-CTTGAGTT----------------G- |
| D_virilis | scaffold_12963:12862857-12862965 - | TGTTGCCT------------TTTTATTTTGCATATTATTTGCTCTTTGGTGATTTTAGCT-GTATGGTGTG-CGCG--T----ATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT--------------------------------GC |
| D_grimshawi | scaffold_14978:831270-831399 + | TGCTGCCCTTTGTTTGCCCTTTTGAGTTTGCATATTATTTGCTCTTTGGTGATTTTAGCT-CTATGGTGTG-CGCA--T----AATCCACAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT--T---G-CTTTCTTT-----------------T |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AGA----------------------------ACATTCTCCGATCTTTGGTGATTCAGCTT-AAATGATAGA-ATTCAGACG--TCTTCATAAAGCTAGGTTACCAAAGCTCGGCGTT---------------------CCAGT---------------T-CG |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTA-------------------------GACATTCTCCGATCTTTGGTGATT-CAGCTTCAATGATTGGCTACAG--GTTTCTTTCATAAAGCTAGGTTACCAAAGCTCGGCGT--------------------CTTGATCT----------------AC |
| Mus_musculus | mmu-mir-9-3:1-90 + | GGAGGCCCGTTTC---------------------------TCTCTTTGGTTATC-TAGCT-GTATGAGTGC-CACAG--AG--CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGA-----------------C-----T---------------CTC-A |
| Rattus_norvegicus | rno-mir-9a-3:1-90 + | GGAGGCCCGTTTC---------------------------TCTCTTTGGTTATC-TAGCT-GTATGAGTGC-CACAG--AG--CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGA-----------------C-----T---------------CTA-A |
| Macaca_mulatta | mml-mir-9-3:1-90 + | GGAGGCCCGTTTC---------------------------TCTCTTTGGTTATC-TAGCT-GTATGAGTGC-CACAG--AG--CCGCTCTCAAGCTAGATAACCGAAAGTAGAAATGA-----------------C-----T---------------CTC-A |
| Pongo_pygmaeus | ppy-mir-9-3:1-90 + | GGAGGCCCGTTTC---------------------------TCTCTTTGGTTATC-TAGCT-GTATGAGTGC-CACAG--AG--CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGA-----------------C-----T---------------CTC-A |
| Homo_sapiens | hsa-mir-9-3:1-90 + | GGAGGCCCGTTTC---------------------------TCTCTTTGGTTATC-TAGCT-GTATGAGTGC-CACAG--AG--CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGA-----------------T-----T---------------CTC-A |
| Mus_musculus | mmu-mir-9-1:1-89 + | CGGGGTTGGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGG-TGTGG--AG--TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-----------------C---------------------CCC-A |
| Rattus_norvegicus | rno-mir-9a-1:1-89 + | CGGGGTTGGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGG-TGTGG--AG--TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-----------------C---------------------CCC-A |
| Macaca_mulatta | mml-mir-9-1:1-89 + | CGGGGTTGGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGG-TGTGG--AG--TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-----------------C---------------------CCC-A |
| Pongo_pygmaeus | ppy-mir-9-1:1-89 + | CGGGGTTGGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGG-TGTGG--AG--TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-----------------C---------------------CCC-A |
| Homo_sapiens | hsa-mir-9-1:1-89 + | CGGGGTTGGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGG-TGTGG--AG--TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-----------------C---------------------CCC-A |
| Mus_musculus | mmu-mir-9-2:1-72 + | G--------TTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGT-ATTG--G----TCTTCATAAAGCTAGATAACCGAAAGTAAAAAC---------------------------------------------- |
| Rattus_norvegicus | rno-mir-9a-2:1-87 + | GGAAGCGAGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGT-ATTG--G----TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-----------------C---------------------TTC-A |
| Macaca_mulatta | mml-mir-9-2:1-87 + | GGAAGCGAGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGT-ATTG--G----TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-----------------C---------------------TTC-A |
| Pongo_pygmaeus | ppy-mir-9-2:1-87 + | GGAAGTGAGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGT-ATTG--G----TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-----------------C---------------------TTC-A |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GGAAGCGAGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGT-ATTG--G----TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-----------------C---------------------TTC-A |
| Homo_sapiens | hsa-mir-9-2:1-87 + | GGAAGCGAGTTGT---------------------------TATCTTTGGTTATC-TAGCT-GTATGAGTGT-ATTG--G----TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-----------------C---------------------TTC-A |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16697909-16698030 + | CT--T---------------------------G----CACT--ATT-TAT------------------C------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-CA---CGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CA----------------------------------------------------------TGAT-------------AT-- |
| D_simulans | zdv96e12.b1:15-131 + | CT--T---------------------------G----CACT--ATT-TAT------------------C------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-CA---CGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CA------------------------------------------------------------------------------- |
| D_yakuba | chr2R:4405017-4405183 - | CT--T---------------------------G----CACT--ATT-TAT------------------C------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-CG---CGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CAGCGCACCAAC--C---------------A-A----AAACAGCCACAA-ATAC-AGGAATGAT-TAAA-AATATCTTT-- |
| D_elegans | scf7180000490579:646025-646202 - | CT--C---------------------------G----CACT--ATT-TAT------------------C------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-CA---CGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CAACGCACCAGCAACAAAAAAAAAACAAAAA-A----CAACAGCCACAA-AAAC-TGGAATGAC-T---------TTAAGT |
| D_eugracilis | scf7180000408961:271824-271982 + | CT--T---------------------------G----CACT--ATT-TAT------------------C------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-CA---CGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATAGCTTAAGCAACGCACCAGAAAC---------------A-A----CAACAGCCACAA-ATTC-AGGAATGAT---------A------T |
| D_ananassae | scaffold_12916:15865465-15865583 - | CA--C---------------------------G----CACTCCCTTTCAT------------------T------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-CA---CGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CA------------------------------------------------------------------------------- |
| D_pseudoobscura | chr4_group3:8443145-8443295 + | CT--CTCCCATTCGCTGTCTGTCGACTTCCATG----CACT--TTT-TGT----------TCTCCTTTA------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-TT---TGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CA------------------------------------------------------------------------------- |
| D_persimilis | super_1:9894267-9894417 + | CT--CTCCCATTCGCTGTCTGCCGCCTTCCATG----CACT--TTT-TGT----------TCTCCTTTA------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-TT---TGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CA------------------------------------------------------------------------------- |
| D_willistoni | scaffold_181061:30518-30658 - | CC--T---------------------------C----CCCT--CTT-CACCATCTTTTCCTCTCCCTCCATCATCATTTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-TT---TGCACATTGTATATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTGC-CA------------------------------------------------------------------------------- |
| D_virilis | scaffold_12963:12863840-12863951 - | CA--C---------------------------A----CACA--ATT-T-T------------------C------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-T------TACAGTTTGTATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTGC-CA------------------------------------------------------------------------------- |
| D_grimshawi | scaffold_14978:830199-830317 + | AT--T---------------------------G----CAAT--TTC-TTT------------------C------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATT-----------GTTT-C------TATATCTTGTATCATC-TAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTGC-CACCG-----------------------------------------------------------------------CCT-- |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AG--A---------------------------A----CATTC---T---------------------------------------CCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGACG-----------------------TCTTCATAAAGCTAGGTTACCAAAGCTCGGCG----------------------------------------------------------------------------TTCCAG---------TTCG-- |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTA---------------------------GACAT---TC---T---------------------------------------CCGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGGTTTCT----------------------TTCATAAAGCTAGGTTACCAAAGCTCGGCGTCTTGAT------------------------------------------------------------------------------------CTAC-- |
| Mus_musculus | mmu-mir-9-3:1-90 + | GG--A---------------------------GGCCC---GT---T---------------------------------------TCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA-G-----------------------CCGTCATAAAGCTAGATAACCGAAAGTAGAAA----------------------------------------------------------------------------TGAC-T---------CTCA-- |
| Rattus_norvegicus | rno-mir-9a-3:1-90 + | GG--A---------------------------GGCCC---GT---T---------------------------------------TCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA-G-----------------------CCGTCATAAAGCTAGATAACCGAAAGTAGAAA----------------------------------------------------------------------------TGAC-T---------CTAA-- |
| Macaca_mulatta | mml-mir-9-3:1-90 + | GG--A---------------------------GGCCC---GT---T---------------------------------------TCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA-G-----------------------CCGCTCTCAAGCTAGATAACCGAAAGTAGAAA----------------------------------------------------------------------------TGAC-T---------CTCA-- |
| Pongo_pygmaeus | ppy-mir-9-3:1-90 + | GG--A---------------------------GGCCC---GT---T---------------------------------------TCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA-G-----------------------CCGTCATAAAGCTAGATAACCGAAAGTAGAAA----------------------------------------------------------------------------TGAC-T---------CTCA-- |
| Homo_sapiens | hsa-mir-9-3:1-90 + | GG--A---------------------------GGCCC---GT---T---------------------------------------TCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA-G-----------------------CCGTCATAAAGCTAGATAACCGAAAGTAGAAA----------------------------------------------------------------------------TGAT-T---------CTCA-- |
| Mus_musculus | mmu-mir-9-1:1-89 + | CG--G---------------------------GGTTG---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA-G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------TAAC-----------CCCA-- |
| Rattus_norvegicus | rno-mir-9a-1:1-89 + | CG--G---------------------------GGTTG---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA-G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------TAAC-----------CCCA-- |
| Macaca_mulatta | mml-mir-9-1:1-89 + | CG--G---------------------------GGTTG---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA-G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------TAAC-----------CCCA-- |
| Pongo_pygmaeus | ppy-mir-9-1:1-89 + | CG--G---------------------------GGTTG---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA-G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------TAAC-----------CCCA-- |
| Homo_sapiens | hsa-mir-9-1:1-89 + | CG--G---------------------------GGTTG---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA-G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------TAAC-----------CCCA-- |
| Mus_musculus | mmu-mir-9-2:1-72 + | G----------------------------------------T---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG---G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------C-------------------- |
| Rattus_norvegicus | rno-mir-9a-2:1-87 + | GG--A---------------------------AGCGA---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG---G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------CTCC-----------TTCA-- |
| Macaca_mulatta | mml-mir-9-2:1-87 + | GG--A---------------------------AGCGA---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG---G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------CTCC-----------TTCA-- |
| Pongo_pygmaeus | ppy-mir-9-2:1-87 + | GG--A---------------------------AGTGA---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG---G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------CTCC-----------TTCA-- |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GG--A---------------------------AGCGA---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG---G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------CTCC-----------TTCA-- |
| Homo_sapiens | hsa-mir-9-2:1-87 + | GG--A---------------------------AGCGA---GT---T---------------------------------------GTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG---G-----------------------TCTTCATAAAGCTAGATAACCGAAAGTAAAAA----------------------------------------------------------------------------CTCC-----------TTCA-- |