| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:642193-642303 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_simulans | chr3L:290535-290645 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_yakuba | chr3L:629639-629749 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_eugracilis | scf7180000409184:669315-669425 + | CTTGTAA-------------------------CTTCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATGCCACA--------------------------------------T--------TCC |
| D_elegans | scf7180000491249:790166-790276 + | TTTGTTA-------------------------CTTCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_ananassae | scaffold_13337:6520579-6520690 - | TTTGTAA--------------A----------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_pseudoobscura | chrXR_group8:4603895-4604015 - | TTTGGGAC-------T-----ACTCCACCAATA---TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_persimilis | super_29:844606-844726 - | TTTGGGAC-------T-----ACTCCACCAATA---TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_willistoni | scaffold_180698:10172097-10172254 + | TTTTTTTCATACATTT----------------TTTTGATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTT--------GCC |
| D_virilis | scaffold_13049:5805300-5805416 + | TTTGTGTG-------T-----CGTCT----ATC---TCTGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTATTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_grimshawi | scaffold_15110:13265206-13265333 - | TGTGCGTC-------TCTCTGTCTCCATCACTA-CCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAG-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| Caenorhabditis_elegans_1 | cel-mir-81:1-108 + | ATCAGTGC-------------------------CATCGTG-----C-CCAACAGTCGGTTTTCACCGTGATCTGA-------GAGCAATCCAA-----AAATGCTTTTCTGAGATCATCGTGAAAGCTAGTTGTT---------GGTC----------------------------------------TACGGGCTTTTG |
| Caenorhabditis_elegans_2 | cel-mir-82:1-97 + | GAAATAG----------------------------------GTTCTTTTAGCAACCGGTTTTCTCTGTGATCTACAGAATGACAGCTAAT---------CGT------CTGAGATCATCGTGAAAGCCAGTTGTTTTTATGAACTC------------------------------------------------------ |
| Caenorhabditis_briggsae_2 | cbr-mir-81:1-90 + | CGTGAT------------------------------------------TAACGGTCGGTTTTCACCTTGATCTGA-------GAGCAATA----ACCAGAATGCTTATCTGAGATCATCGTGAAAGCTAGTTGTT---------ACTT----------------------------------------C--------ACT |
| Caenorhabditis_briggsae_1 | cbr-mir-82:1-95 + | AAGTT---------------------------------------CTTCTAGCGACAGGTTTTCGCCGTGATCTGC-------A-GAGTTCCATGAA--GAAA--ACATCTGAGATCATCGTGAAAGCCAGTTGCTTAAGAGGACTC------------------------------------------------------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18472019-18472126 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTACA-------------CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCATTT |
| D_simulans | chr2L:18160930-18161037 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTACA-------------CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCATTT |
| D_yakuba | chr2R:4988819-4988926 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTACA-------------CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCATTT |
| D_eugracilis | scf7180000409447:414649-414756 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------------------C-TACAAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAG-----CCGCAATT |
| D_elegans | scf7180000491338:2439478-2439585 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------------------C-TACTAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCAATT |
| D_ananassae | scaffold_12916:2379166-2379273 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-CAA---------------------C-TAAGAATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAG-----CCGCATTT |
| D_pseudoobscura | chr4_group3:3635640-3635746 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAC-----------------------TTCAGATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAG-----CCTCATTT |
| D_persimilis | super_1:5116219-5116325 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAC-----------------------TTCAGATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAG-----CCTCATTT |
| D_willistoni | scaffold_180708:11623134-11623240 + | AAAGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTAT--------T-CA---ATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAG-----CCAC---A |
| D_virilis | scaffold_12963:18451337-18451441 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAT---------------------T-TATAGAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAG-----CCGC---A |
| D_grimshawi | scaffold_3792:132-239 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAT---------------------C-TATCTAGCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAG-----CAGCATAG |
| Caenorhabditis_elegans | cel-let-7:1-99 + | T-ACAC----------TGTGGAT---CCGGTGAGGTAGTAGGTTGTATAGTTT-GG-AA-------TATTAC---CA----CC--GGTGAACTATGCAATTTTCTACCTTACCGGAGACAGA---ACT-----CTTC--GA |
| Caenorhabditis_briggsae | cbr-let-7:1-87 + | A-CTGG-------------GG----TACGGTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TATTAC---TC----TCG--GTGAACTATGCAAGTTTCTACCTCACCGAATACC-----AG-------------G |
| Mus_musculus_11 | mmu-let-7f-1:1-89 + | A-T----------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG------------------------ |
| Mus_musculus_10 | mmu-let-7g:1-88 + | C-C-----------------------AGGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCAGG------------------------- |
| Mus_musculus_1 | mmu-let-7b:1-85 + | G------------------------CAGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCCGAAGATAACTATACAACCTACTGCCTTCCCTGA------------------------- |
| Mus_musculus_3 | mmu-let-7a-1:1-94 + | T-T----------CACTG-------TGGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGA-------------------T |
| Mus_musculus_2 | mmu-let-7i:1-85 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG-------------------------- |
| Mus_musculus_5 | mmu-let-7c-1:1-94 + | T-GTGTGC-------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCAC---AC-------------T |
| Mus_musculus_4 | mmu-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Mus_musculus_7 | mmu-let-7d:1-103 + | A-ATGGGT-------------TCCT-AGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGAGATTTT---GCCC-A-CAAGGAGTTAACTATACGACCTGCTGCCTTTCTTAGGGCCTT---AT-------------T |
| Mus_musculus_6 | mmu-let-7a-2:1-96 + | C-TGCATGT------------TCCC-AGGTTGAGGTAGTAGGTTGTATAGTTT-AG-AG-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTT--GCA-------------C |
| Mus_musculus_9 | mmu-let-7e:1-93 + | C-GCGCC--------------CCCC-GGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------AGACAC------C-CGAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGC---GC-------------C |
| Mus_musculus_8 | mmu-let-7c-2:1-95 + | A-CGGC---------------CTTT-GGGGTGAGGTAGTAGGTTGTATGGTTT-TG-GG-------CTCTGC---CCCGC-TCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC---CG-------------C |
| Rattus_norvegicus_10 | rno-let-7c-2:1-95 + | A-CGGC---------------CTTT-GGGGTGAGGTAGTAGGTTGTATGGTTT-TG-GG-------CTCTGC---CCCGC-TCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC---CG-------------C |
| Rattus_norvegicus_1 | rno-let-7e:1-93 + | C-GCGCC--------------CCCC-GGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------AGACAC------C-CGAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGC---GC-------------C |
| Rattus_norvegicus_4 | rno-let-7b:1-85 + | G------------------------CGGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTC---GCCC-C-TCCGAAGATAACTATACAACCTACTGCCTTCCCTGA------------------------- |
| Rattus_norvegicus_5 | rno-let-7a-2:1-96 + | C-GGCATG---------C---TCCC-AGGCTGAGGTAGTAGGTTGTATAGTTT-AG-AG-------TTACAA------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTT--GCA-------------C |
| Rattus_norvegicus_2 | rno-let-7d:1-98 + | T-GGGC---------------TCCT-AGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGAGATTTT---GCCC-A-CAAGGAGTTAACTATACGACCTGCTGCCTTTCTTAGGGCC------T-------------T |
| Rattus_norvegicus_3 | rno-let-7i:1-85 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG-------------------------- |
| Rattus_norvegicus_8 | rno-let-7f-1:1-89 + | A-T----------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG------------------------ |
| Rattus_norvegicus_9 | rno-let-7a-1:1-94 + | T-T----------CACTG-------TGGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGA-------------------T |
| Rattus_norvegicus_6 | rno-let-7c-1:1-94 + | T-GTGTGC-------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCAC---AC-------------T |
| Rattus_norvegicus_7 | rno-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Macaca_mulatta_1 | mml-let-7g:1-84 + | A--------------------------GGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA--------------------------- |
| Macaca_mulatta_2 | mml-let-7d:1-87 + | C-C----------------------TAGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGGGATTTT---GCCC-A-CAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG------------------------ |
| Macaca_mulatta_3 | mml-let-7b:1-83 + | C-------------------------GGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCAGAAGATAACTATACAACCTACTGCCTTCCCTG-------------------------- |
| Macaca_mulatta_4 | mml-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Macaca_mulatta_5 | mml-let-7a-2:1-72 + | A--------------------------GGCTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCT--------------------------- |
| Macaca_mulatta_6 | mml-let-7e:1-79 + | C-C----------------------CGGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG----------------------- |
| Macaca_mulatta_7 | mml-let-7a-1:1-80 + | T-------------------------GGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTA-------------------------- |
| Macaca_mulatta_8 | mml-let-7c:1-84 + | G-C------------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAG---------------------C |
| Macaca_mulatta_9 | mml-let-7i:1-85 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG-------------------------- |
| Macaca_mulatta_10 | mml-let-7f-1:1-87 + | T------------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA------------------------- |
| Macaca_mulatta_11 | mml-let-7a-3:1-74 + | ---------------------------GGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCT--------------------------- |
| Pongo_pygmaeus_10 | ppy-let-7i:1-84 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTA--------------------------- |
| Pongo_pygmaeus_11 | ppy-let-7g:1-84 + | A--------------------------GGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA--------------------------- |
| Pongo_pygmaeus_4 | ppy-let-7f-1:1-87 + | T------------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA------------------------- |
| Pongo_pygmaeus_5 | ppy-let-7e:1-79 + | C-C----------------------CGGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG----------------------- |
| Pongo_pygmaeus_2 | ppy-let-7b:1-83 + | C-------------------------GGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCAGAAGATAACTATACAACCTACTGCCTTCCCTG-------------------------- |
| Pongo_pygmaeus_3 | ppy-let-7d:1-87 + | C-C----------------------TAGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGGGATTTT---GCCC-A-CAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG------------------------ |
| Pongo_pygmaeus_1 | ppy-let-7a-3:1-74 + | ---------------------------GGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCT--------------------------- |
| Pongo_pygmaeus_9 | ppy-let-7a-1:1-80 + | T-------------------------GGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTA-------------------------- |
| Pongo_pygmaeus_8 | ppy-let-7c:1-84 + | G-C------------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAG---------------------C |
| Pongo_pygmaeus_7 | ppy-let-7a-2:1-72 + | A--------------------------GGTTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCT--------------------------- |
| Pongo_pygmaeus_6 | ppy-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Gorilla_gorilla_2 | ggo-let-7f:1-110 + | A-AAAC-ATTGC----TCTAT----CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGAGGAGTA---GA-------------C |
| Gorilla_gorilla_3 | ggo-let-7e:1-109 + | A-C----CTGCCGCGCC----CCCC-GGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGC---GCCCTGCACG---GGA |
| Gorilla_gorilla_4 | ggo-let-7b:1-109 + | C-AAGGCCGGG-----CCTGG----CGGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCAGAAGATAACTATACAACCTACTGCCTTCCCTGAGGAGCC--CAG-------------T |
| Gorilla_gorilla_5 | ggo-let-7a:1-109 + | A-G--ACCGACTGCCCT------TT-GGGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCTGAAGTGGCTGTAA---------TATCT |
| Gorilla_gorilla_6 | ggo-let-7i:1-108 + | C-CCGACACCATG--------GCCC-TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAGTG-CT-G---GT-------------G |
| Gorilla_gorilla_7 | ggo-let-7g:1-111 + | C-C-----TTTTGCCTGA---TTCC-AGGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCAGGAACAGC---GC-------------G |
| Gorilla_gorilla_1 | ggo-let-7c:1-108 + | G-AAGC--TGTGTGC------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCAC---AC-TTGAGCC---ATC |
| Homo_sapiens_1 | hsa-let-7d:1-87 + | C-C----------------------TAGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGGGATTTT---GCCC-A-CAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG------------------------ |
| Homo_sapiens_9 | hsa-let-7g:1-84 + | A--------------------------GGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA--------------------------- |
| Homo_sapiens_8 | hsa-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Homo_sapiens_7 | hsa-let-7a-1:1-80 + | T-------------------------GGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTA-------------------------- |
| Homo_sapiens_6 | hsa-let-7a-3:1-74 + | ---------------------------GGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCT--------------------------- |
| Homo_sapiens_5 | hsa-let-7b:1-83 + | C-------------------------GGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCGGAAGATAACTATACAACCTACTGCCTTCCCTG-------------------------- |
| Homo_sapiens_4 | hsa-let-7i:1-84 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTA--------------------------- |
| Homo_sapiens_3 | hsa-let-7e:1-79 + | C-C----------------------CGGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG----------------------- |
| Homo_sapiens_2 | hsa-let-7a-2:1-72 + | A--------------------------GGTTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCT--------------------------- |
| Homo_sapiens_11 | hsa-let-7f-1:1-87 + | T------------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA------------------------- |
| Homo_sapiens_10 | hsa-let-7c:1-84 + | G-C------------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAG---------------------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:20487426-20487546 + | AAAGACCATCCCATA-----------TTCAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAG-TTATATT-CAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAGACATCGGAGT----TGAA------A |
| D_simulans | chr2L:20052694-20052814 + | AAAGACCATCCCATC-----------TTCAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAG-TTATACT-CAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAGACATCGGAGT----TGAA------A |
| D_yakuba | chr2R:6842709-6842830 + | AAAGAACATCCCACC-----------ATCAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATACT-CAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAGTCATCGGAGT----TGAA------A |
| D_eugracilis | scf7180000409767:814641-814757 - | AAAGAACTT----------------TATCAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATAGA-AAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACATCGAAGT----TGAA------A |
| D_elegans | scf7180000491186:467220-467343 + | AAATAACAT----------------AATCAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATATT-CAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCCTGACATCGAAGTAGAGTGAA-AAC--A |
| D_ananassae | scaffold_12916:6985813-6985928 + | AAATATCAA-----------------GAGAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATAATAT-CAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACTTCAAGTT----TAAA------T |
| D_pseudoobscura | chr4_group3:7845311-7845422 - | GGAAATC------------------AGAAGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATAACAT-AAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACAGCG---T----CTAC------A |
| D_persimilis | super_1:9292009-9292126 - | AAAGACGGAATC-------------AGAAGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATAACAT-AAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACATCGCC------TACA------G |
| D_willistoni | scaffold_180708:1845911-1846049 + | ATAGATGGTAGATATATATGTAGCTACTTGGCCTCTTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATTAAATAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGTCCGACATCATC------TACAATATAAT |
| D_virilis | scaffold_12963:13613413-13613527 - | TGTGCTT------------------ACTTGGCCT-TTGAGAGTTCCATGCTTCCTTACATTCA-ATAGTATTCAAA-TAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAAACATCACAAA----AACA------A |
| D_grimshawi | scaffold_15126:6250403-6250508 + | ATTGTTT------------------ACTTGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATAAA-TAAGCATATGGAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAAACATC-------------------- |
| Caenorhabditis_elegans | cel-mir-1:1-96 + | AAAGT------------------------GACCG-TACCGAGCTGCATACTTCCTTACATGCCCATACTATATCATAAATGGATATGGAATGTAAAGAAGTATGTA--GAACGG-GGTGG----TA-------------------G------T |
| Caenorhabditis_briggsae | cbr-mir-1:1-94 + | TG-----------------------------CTG-TGCCGAGCTGCATACTTCCTTACATGCCCATACTGTACTGTGAATGGATATGGAATGTAAAGAAGTATGTAGAACGGA-AT----CTAACGGCG------------------------ |
| Mus_musculus_1 | mmu-mir-1a-1:1-77 + | GCT------------------------------T-----GGGACACATACTTCTTTATATGCCCATAT-GAACCTG-CTAAGCTATGGAATGTAAAGAAGTATGTA--TTTCAG-G----C-------------------------------- |
| Mus_musculus_3 | mmu-mir-1a-2:1-72 + | TCA-------------------------------------GAGCACATACTTCTTTATGTACCCATAT-GAACATT-CAGTGCTATGGAATGTAAAGAAGTATGTA--TTTTG---------------------------------------- |
| Mus_musculus_2 | mmu-mir-206:1-73 + | CCA-------------------------------------GGCCACATGCTTCTTTATATCCTCATAG-ATATC-T-CAGCACTATGGAATGTAAGGAAGTGTGTG--GTTTTG-G------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-206:1-84 + | C-------------------------------TT-CCCCAGGCCACATGCTTCTTTATATCCTCATAG-ATATC-A-CTGCGCTATGGAATGTAAGGAAGTGTGTG--GTTTTG-GCAAG----TG--------------------------- |
| Rattus_norvegicus_2 | rno-mir-1:1-87 + | TG-----------------------------CCT-ACTCAGAGCACATACTTCTTTATGTACCCATAT-GAACATA-GAATGCTATGGAATGTAAAGAAGTGTGTA--TTTTGG-GTAGG----TA--------------------------- |
| Macaca_mulatta_1 | mml-mir-206:1-86 + | TG-----------------------------CTT-CCCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATGGAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TG--------------------------- |
| Macaca_mulatta_2 | mml-mir-1-2:1-72 + | CA--------------------------------------GAGTACATACTTCTTTATGTACCCATAT-GAACATA-CAAGGCTATGGAATGTAAAGAAGTATGTA--TTTTGG--------------------------------------- |
| Macaca_mulatta_3 | mml-mir-1-1:1-77 + | GC------------------------------TT-----GGGAAACATACTTCTTTATATGCCCATAT-GGACCTG-CTAAGCTATGGAATGTAAAGAAGTATGTA--TCTCAG-G----C-------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-1-1:1-71 + | TG--------------------------------------GGAAACATACTTCTTTATATGCCCATAT-GGACCTG-CTAAGCTATGGAATGTAAAGAAGTATGTA--TCTCA---------------------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-206:1-86 + | TG-----------------------------CTT-CCCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATGGAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TG--------------------------- |
| Gorilla_gorilla_2 | ggo-mir-1:1-111 + | AGCTAACAACTTAGT-----------AATAC-CTACTCA-GAGTACATACTTCTTTATGTACCCATAT-GAACATA-CAATGCTATGGAATGTAAAGAAGTATGTA--TTTTTG-GTAGG----CAATAAAC--------------------C |
| Gorilla_gorilla_1 | ggo-mir-206:1-112 + | GCTGCTTCTGGATGA-----------CACTGCTT-CCCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATGGAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TGCCTCCTC-------------------G |
| Homo_sapiens_1 | hsa-mir-206:1-86 + | TG-----------------------------CTT-CCCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATGGAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TG--------------------------- |
| Homo_sapiens_3 | hsa-mir-1-1:1-71 + | TG--------------------------------------GGAAACATACTTCTTTATATGCCCATAT-GGACCTG-CTAAGCTATGGAATGTAAAGAAGTATGTA--TCTCA---------------------------------------- |
| Homo_sapiens_2 | hsa-mir-1-2:1-85 + | ACCTA------------------------------CTCA-GAGTACATACTTCTTTATGTACCCATAT-GAACATA-CAATGCTATGGAATGTAAAGAAGTATGTA--TTTTTG-GTAGG----C---------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:2635213-2635319 - | CC------TC-ATCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATA-CTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATC--------------GA----- |
| D_simulans | chr3R:2666345-2666451 - | CC------TC-ATCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATA-CTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATC--------------GA----- |
| D_yakuba | chr3R:7777990-7778096 + | CC------TC-ATCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATA-CTAG-TTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATC--------------GG----- |
| D_eugracilis | scf7180000409886:257332-257438 + | CT------CC-TTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACT-CTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATC--------------GA----- |
| D_elegans | scf7180000491278:1424384-1424490 - | CC------CC-TTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACA-TTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGC--------------GA----- |
| D_ananassae | scaffold_13340:5417353-5417464 + | CC------TA-TCCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATA-CTAG-TTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATC--------------GTAAAAT |
| D_pseudoobscura | chr2:19739488-19739592 + | TC------TC---AAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACA-TTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAAC--------------GA----- |
| D_persimilis | super_3:2487675-2487785 + | TTTGG-TT-C-TCAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACA-TTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAAC--------------GA----- |
| D_willistoni | scaffold_181089:12007310-12007419 - | T----------------TTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATA-CTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAACAAACCA----AA----- |
| D_virilis | scaffold_13047:6092057-6092155 + | T----------------TTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACA-CTAG-TTTTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGC--------------GA----- |
| D_grimshawi | scaffold_14906:11443552-11443654 + | T-----------TCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACA-CTAG-CTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACC--------------GA----- |
| Mus_musculus_1 | mmu-mir-10b:1-68 + | -------------------------TATATACCCTGTAGAACCGAATTTGTGTGGTA-CC--CACATAGTCACAGATTCGATTCTAGGGGAATATA--------------------------------------- |
| Mus_musculus_2 | mmu-mir-10a:1-110 + | GA------CCTGTC--TGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAAT--TTTGTGGTCACAAATTCGTATCTAGGGGAATATGTA--GTTG-AC-------ATAAACACTCCGCTCA----- |
| Rattus_norvegicus_1 | rno-mir-10a:1-110 + | GA------CCTGTC--TGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAAT--TTTGTGGTCACAAATTCGTATCTAGGGGAATATGTA--GTTG-AC-------ATAAACACTCCGCTCA----- |
| Rattus_norvegicus_2 | rno-mir-10b:1-109 + | CCAAA-GT--TGTAAC-GTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTA-CC--CACATAGTCACAGATTCGATTCTAGGGGAATATATG--GTCG-AT-------GCAAAAACTT----CA----- |
| Macaca_mulatta_1 | mml-mir-10b:1-110 + | CCAGAGGT--TGTAAC-GTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTA-TC--CATATAGTCACAGATTCGATTCTAGGGGAATATATG--GTCG-AT-------GCAAAAACTT----CA----- |
| Macaca_mulatta_2 | mml-mir-10a:1-109 + | GA------TCTGTC--TGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAAT--TTTGTGGTCACAAATTCGTATCTAGGGGAATATGTA--GTTG-AC-------ATAAACACTCCGC-TC----- |
| Pongo_pygmaeus_2 | ppy-mir-10a:1-110 + | GA------TCTGTC--TGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAAT--TTTGTGGTCACAAATTCGTATCTAGGGGAATATGTA--GTTG-AC-------ATAAACACTCCGCTCG----- |
| Pongo_pygmaeus_1 | ppy-mir-10b:1-110 + | CCAGAGGT--TGTAAC-GTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTA-TC--CATATAGTCACAGATTCGATTCTAGGGGAATATATG--GTCG-AT-------GCAAAAACTT----CA----- |
| Gorilla_gorilla_2 | ggo-mir-10a:1-110 + | GA------TCTGTC--TGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAAT--TTTGTGGTCACAAATTCGTATCTAGGGGAATATGTA--GTTG-AC-------ATAAACACTCCGCTCT----- |
| Gorilla_gorilla_1 | ggo-mir-10b:1-110 + | CCAGACAT--TGTAAC-GTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTA-TC--CATATAGTCACAGATTCGATTCTAGGGGAATATATG--GTCG-AT-------GCAAAAACTT----CA----- |
| Homo_sapiens_1 | hsa-mir-10b:1-110 + | CCAGAGGT--TGTAAC-GTTGTCTATATATACCCTGTAGAACCGAATTTGTGTGGTA-TC--CGTATAGTCACAGATTCGATTCTAGGGGAATATATG--GTCG-AT-------GCAAAAACTT----CA----- |
| Homo_sapiens_2 | hsa-mir-10a:1-110 + | GA------TCTGTC--TGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAAT--TTTGTGGTCACAAATTCGTATCTAGGGGAATATGTA--GTTG-AC-------ATAAACACTCCGCTCT----- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18471419-18471548 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATGACA |
| D_simulans | chr2L:18160327-18160456 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATGACA |
| D_yakuba | chr2R:4988205-4988334 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATGACA |
| D_eugracilis | scf7180000409447:413958-414087 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTT-TTGGC-AACAAAATGG--------------------AATGACA |
| D_elegans | scf7180000491338:2438776-2438906 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATCA--------------------AATGACA |
| D_ananassae | scaffold_12916:2378756-2378885 + | ATACTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATCGAA |
| D_pseudoobscura | chr4_group3:3634738-3634867 + | ATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATT---------------------TATCACA |
| D_persimilis | super_1:5115309-5115438 + | ATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATT---------------------TATCACA |
| D_willistoni | scaffold_180708:11622810-11622939 + | ATAGTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGCCAACAAAATCG--------------------AAT--CG |
| D_virilis | scaffold_12963:18449830-18449980 + | ATACTCAAATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAAGACATATAAAATATATTAACAAAAATGACA |
| D_grimshawi | scaffold_15252:6427650-6427777 + | ATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAA-----------------------GACTACA |
| Mus_musculus_1 | mmu-mir-100:1-80 + | C--------------CTGTTGCCACAAACCCGTAGATCCGAACTTGTGCTGATT--CTG--CACACAAGCTTGTGTCTATAGGTATGTGTCTGTT------------------------------------------------------AGG |
| Mus_musculus_3 | mmu-mir-99a:1-65 + | ----------------------CATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGAC--CGCGCAAGCTCGTTTCTATGGGTCTGTG--------------------------------------------------------------- |
| Mus_musculus_2 | mmu-mir-99b:1-70 + | G--------------------GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCG-CCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-99b:1-70 + | G--------------------GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCG-CCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------------------------------- |
| Rattus_norvegicus_2 | rno-mir-99a:1-81 + | C--------------CCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGAC--CGCACAAGCTCGTTTCTATGGGTCTGTGGCAGTGTG------------------------------------------------------- |
| Rattus_norvegicus_3 | rno-mir-100:1-80 + | C--------------CTGTTGCCACAAACCCGTAGATCCGAACTTGTGCTGAC--CATG--CACACAAGCTTGTGTCTATAGGTATGTGTCTGTT------------------------------------------------------AGG |
| Macaca_mulatta_1 | mml-mir-100:1-80 + | C--------------CTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT--AGTC--CGCACAAGCTTGTGTCTATAGGTATGTGTCTTT----------------TAG--------------------------------------G |
| Macaca_mulatta_2 | mml-mir-99b:1-70 + | G--------------------GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCG-CCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------------------------------- |
| Macaca_mulatta_3 | mml-mir-99a:1-81 + | C--------------CCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGAC--CGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG------------------------------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-99a:1-81 + | C--------------CCATTGGCATAAACCCGTAGATCCGATCTTGTGGTAAAGTGGAC--CGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG------------------------------------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-100:1-80 + | C--------------CTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT--AGTC--CGCACAAGCTTGTATCTATAGGTATGTGTCTGTT------------------------------------------------------AGG |
| Gorilla_gorilla_2 | ggo-mir-100:1-80 + | C--------------CTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT--AGTC--CGCACAAGCTTGTATCTATAGGTATGTGTCTGTT------------------------------------------------------AGG |
| Gorilla_gorilla_1 | ggo-mir-99a:1-81 + | C--------------CCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGAC--CGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG------------------------------------------------------- |
| Homo_sapiens_1 | hsa-mir-99b:1-70 + | G--------------------GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCG-CCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------------------------------- |
| Homo_sapiens_3 | hsa-mir-99a:1-81 + | C--------------CCATTGGCATAAACCCGTAGATCCGATCTTGTGGTGAAGTGGAC--CGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTGTG------------------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-100:1-80 + | C--------------CTGTTGCCACAAACCCGTAGATCCGAACTTGTGGTATT--AGTC--CGCACAAGCTTGTATCTATAGGTATGTGTCTGTT------------------------------------------------------AGG |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:17566355-17566484 + | CCCA---------AGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCATA-CCCAAT--A |
| D_simulans | chr2L:17270490-17270619 + | CCCA---------AGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCATA-CCCAAT--G |
| D_yakuba | chr2R:3533165-3533294 - | CCCA---------AGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTTC-----TCATA-CCCAAT--G |
| D_eugracilis | scf7180000409016:190114-190244 + | CCCA---------AGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCAGATCTCAAC--T |
| D_elegans | scf7180000491046:269607-269743 + | CCCA---------AGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTAC------AAGTTACTCAAACAAAA-AACAAAGCG |
| D_ananassae | scaffold_12916:3309677-3309806 - | CCAG---------AGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTAC------AAACTAC-----AAATG-ACATAT--T |
| D_pseudoobscura | chr4_group3:10867616-10867737 - | TCTC---------AGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTAC------TA----------TCAAA-AACAGC--A |
| D_persimilis | super_8:2078713-2078834 - | TCTC---------AGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTAC------TA----------TCAAA-AACAGC--A |
| D_willistoni | scaffold_180764:940183-940306 - | TTCT----CA--GA---------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTT-ATTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTAC------AAAAA-C-----CAAAA-CGCAAA--A |
| D_virilis | scaffold_12963:16493143-16493272 + | GACAACATTCGTGAGTGC----CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAA-TTTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTAC------AATTAAC-----AAA------AAT--A |
| D_grimshawi | scaffold_15252:13906813-13906947 + | GTGG---------TGTGTGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTT-TTTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCCA-----TTCAAA-TATA-ACCAGC--A |
| Caenorhabditis_elegans | cel-mir-124:1-96 + | GTCC--------------CACTTGTCATCTGGCATGCA----CCCTAGTGACTTTAGTGGACATCTAAGTC-T--------TCCAACTAAGGCACGCGGTGAATGCCACGTGGCCATGA----------------------TGG---------------G |
| Caenorhabditis_briggsae | cbr-mir-124:1-98 + | TTTC--------------CAGTCGTCATATGGC----GTCCACCTGAGTGACTTTAGTGGACATGTATAGT-T--------TCCAACTAAGGCACGCGGTGAATGCCACGTG--G---CAATTCTGG------G---------AT--------------- |
| Mus_musculus_1 | mmu-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Mus_musculus_3 | mmu-mir-124-3:1-68 + | -----------------------------------------CTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAG------------------------------------------------ |
| Mus_musculus_2 | mmu-mir-124-2:1-109 + | ATCAAGATCA--GAGAC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Rattus_norvegicus_1 | rno-mir-124-2:1-109 + | ATCAAGATCA--GAGAC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Rattus_norvegicus_2 | rno-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Rattus_norvegicus_3 | rno-mir-124-3:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Macaca_mulatta_1 | mml-mir-124a-2:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Macaca_mulatta_2 | mml-mir-124a-1:1-109 + | ATCAAGATCA--GAGGC--------------------TCTGCCCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Pongo_pygmaeus_2 | ppy-mir-124a:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCCCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Pongo_pygmaeus_1 | ppy-mir-124-2:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Gorilla_gorilla | ggo-mir-124a:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Homo_sapiens_1 | hsa-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Homo_sapiens_3 | hsa-mir-124-3:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Homo_sapiens_2 | hsa-mir-124-2:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18472300-18472439 + | ------AAT-----A--TTGGCATTGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAT--A-----AG--------------------G----C |
| D_simulans | chr2L:18161211-18161350 + | ------AAT-----A--TTGGCATTGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAT--A-----AG--------------------G----C |
| D_yakuba | chr2R:4989099-4989238 + | ------AAT-----A--TTGGCATTGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAT--A-----AG--------------------G----C |
| D_eugracilis | scf7180000409447:414929-415073 + | ------AAT-----A--TTGGCATTAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGA------------------------AAAAT--AAACAAAG--------------------G----C |
| D_elegans | scf7180000491338:2439758-2439904 + | ------AAT-----A--TTGGCATTAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAAGAAAACCCAG--------------------G----C |
| D_ananassae | scaffold_12916:2379461-2379598 + | ------AAT-----A--TTGGTATTGGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAC------------------------AAAA---------AA--------------------G----A |
| D_pseudoobscura | chr4_group3:3635996-3636136 + | ------AGT-----A--TTGGTATGAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTATACA----------------------A-AAAAA--A-----AA--------------------G----C |
| D_persimilis | super_2335:2506-2645 + | ------AGT-----A--TTGGTATGAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTATACA------------------------AAAAA--A-----AA--------------------G----C |
| D_willistoni | scaffold_180708:11623324-11623458 + | ------ATT-----A--TTGGTATTAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAA------------------------AA------------A--------------------G----C |
| D_virilis | scaffold_12963:18451638-18451806 + | ------TATTACACA--TTGGTATTAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAAAAAACAAAAACAATTACAAAAAAAT--A-----AG--------------------A----A |
| D_grimshawi | scaffold_15252:6428908-6429045 + | ------CAC-----A--TTGGTATTAGTGACATGTGCAAATGTTTGTATGGCTGATTCCCTGAGACCCT--AACTTGTGACTTTTAATA-CCAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAA---------A--------------------A----C |
| Mus_musculus_1 | mmu-mir-125b-2:1-71 + | ------G--------------------------------------------CCTAGTCCCTGAGACCCT--AACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGTTCTTGGGACCTAG---------------------------------------------------------------GC------------------------ |
| Mus_musculus_3 | mmu-mir-125b-1:1-77 + | ------TGC-----G--CTCC-----------------------------CCTCAGTCCCTGAGACCCT--AACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTG------------------------------------------------------------------------------------------ |
| Mus_musculus_2 | mmu-mir-125a:1-68 + | ---------------------------------------------------CTGGGTCCCTGAGACCCTTTAACCTGTGAGGA----CGTCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTG---------------------------------------------------------------G------------------------- |
| Rattus_norvegicus_1 | rno-mir-125a:1-85 + | ------TGC-----C--GGCC-----------------------------TCTGGGTCCCTGAGACCCTTTAACCTGTGAGGA----CGTCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTG---------------------------------------------------------------GCGCCTGG-----------------C |
| Rattus_norvegicus_2 | rno-mir-125b-2:1-88 + | ------ACC-----AGACTTT-----------------------------TCCTAGTCCCTGAGACCCT--AACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAG---------------------------------------------------------------GCGGAGAG-----------------G |
| Rattus_norvegicus_3 | rno-mir-125b-1:1-87 + | ------TGC-----G--CTCC-----------------------------CCTCAGTCCCTGAGACCCT--AACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC---------------------------------------------------------------GAGTCGTG-----------------C |
| Macaca_mulatta_1 | mml-mir-125b-2:1-89 + | ------ACC-----AGACTTT-----------------------------TCCTAGTCCCTGAGACCCT--AACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAG---------------------------------------------------------------GCGGAGGGG----------------A |
| Macaca_mulatta_2 | mml-mir-125a:1-86 + | ------TGC-----C--AGTC-----------------------------TCTGGGTCCCTGAGACCCTTTAACCTGTGAGGA----CATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTG---------------------------------------------------------------GCGTCTGGC----------------C |
| Macaca_mulatta_3 | mml-mir-125b-1:1-88 + | ------TGC-----G--CTCC-----------------------------TCTCAGTCCCTGAGACCCT--AACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC---------------------------------------------------------------GAGTCGTGC----------------T |
| Pongo_pygmaeus_2 | ppy-mir-125b-1:1-88 + | ------TGC-----G--CTCC-----------------------------TCTCAGTCCCTGAGACCCT--AACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC---------------------------------------------------------------GAGTCGTGC----------------T |
| Pongo_pygmaeus_3 | ppy-mir-125b-2:1-89 + | ------ACC-----AGACTTT-----------------------------TCCTAGTCCCTGAGACCCT--AACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAG---------------------------------------------------------------GCGGAGGGG----------------A |
| Pongo_pygmaeus_1 | ppy-mir-125a:1-86 + | ------TGC-----C--AGTC-----------------------------TCTAGGTCCCTGAGACCCTTTAACCTGTGAGGA----CATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTG---------------------------------------------------------------GCGTCTGGC----------------C |
| Gorilla_gorilla_2 | ggo-mir-125b-2:1-89 + | ------ACC-----AGACTTT-----------------------------TCCTAGTCCCTGAGACCCT--AACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAG---------------------------------------------------------------GCGGAGGGG----------------A |
| Gorilla_gorilla_3 | ggo-mir-125a:1-108 + | CCATGTTGC-----C--AGTC-----------------------------TCTAGGTCCCTGAGACCCTTTAACCTGTGAGGA----CATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTG---------------------------------------------------------------GTGTCTGGCCCAACCACACACCTGGG |
| Gorilla_gorilla_1 | ggo-mir-125b-1:1-88 + | ------TGC-----G--CTCC-----------------------------TCTCAGTCCCTGAGACCCT--AACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC---------------------------------------------------------------GAGTCGTGC----------------T |
| Homo_sapiens_1 | hsa-mir-125b-2:1-89 + | ------ACC-----AGACTTT-----------------------------TCCTAGTCCCTGAGACCCT--AACTTGTGAGGTATTTTA-GTAACATCACAAGTCAGGCTCTTGGGACCTAG---------------------------------------------------------------GCGGAGGGG----------------A |
| Homo_sapiens_3 | hsa-mir-125a:1-86 + | ------TGC-----C--AGTC-----------------------------TCTAGGTCCCTGAGACCCTTTAACCTGTGAGGA----CATCCAGGGTCACAGGTGAGGTTCTTGGGAGCCTG---------------------------------------------------------------GCGTCTGGC----------------C |
| Homo_sapiens_2 | hsa-mir-125b-1:1-88 + | ------TGC-----G--CTCC-----------------------------TCTCAGTCCCTGAGACCCT--AACTTGTGATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC---------------------------------------------------------------GAGTCGTGC----------------T |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:20616602-20616729 + | ----CATTCGA----------------------------------G----AATTTCCACCTGCAACA-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGT-TT-TT-C-AAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGATGACAACGAAAG--CCTA----------------GTGAAC |
| D_simulans | chr2L:20179920-20180047 + | ----CATTCGA----------------------------------G----AATTTGCACCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGT-TT-TT-T-AAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGCTGACATCGAAAG--CCGA----------------GCGAAC |
| D_yakuba | chr2R:6964793-6964921 + | ----TATTCCA----------------------------------G----AATTTCCTCCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGT-TT-TT-CCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGATGACAACGAAGT--ACGA----------------GTAAAC |
| D_eugracilis | scf7180000409767:678694-678826 - | ----TTTTCCA----------------------------------GA--AAATGATTATCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTAC-TTTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTCGTTGACAACGAATT--TCGA----------------GTGAAA |
| D_elegans | scf7180000491186:607671-607801 + | ----TATTAAA-------------------------------------CAAATTATTACCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTATT-TTTT-CAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGGTGACAACGAAAT--ACGA----------------GTGAAC |
| D_ananassae | scaffold_12916:7117508-7117634 + | ----TTC--GT----------------------------------G----AATGATTATCTGCAACG-CTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTATC-T-TT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGATGACAACAAAGT--ACAA----------------GTGAAA |
| D_pseudoobscura | chr4_group3:7699977-7700121 - | ----GACGCGT----------------------------------G----TGTGCTTATGTACAACGGCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTAT-TT-TA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTATC-AGTG-GTTGATTCCAACAAAAA--ACAAAAGGCGCCAACAAATAATAAAG |
| D_persimilis | super_1:9145698-9145865 - | ----TATTTGTA----------TGTGTA-TTTGTATGTGACGCGTG----TGTGCTTATGTACAACGGCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTAT-TT-TA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTATC-AGTG-GTTGATTCCAACAAAAA--ACAAAAGGCGCCAACAAATAATAAAG |
| D_willistoni | scaffold_180708:2027542-2027651 + | ----TA--------------------------------------------------------CAACA-CTGAA-TGTAGCTGGTTGACATCGGGTCAGATCTATT-TATT-TGAAGCATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGATCCCAACAAAAA--GCAA-----------------TGGAA |
| D_virilis | scaffold_12963:13475783-13475914 - | ----CAAACGAAGATATAT--ATTGCCAATC--------------G----AAT-CACATTCACAACG-CTGTG-TGTAGTTGGTTGACATCGGGTCAGATCTAT-TT-CT-GAAAGCATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGAAGCCAACAA------------------------------- |
| D_grimshawi | scaffold_15126:6389834-6389991 + | ----CAAACAAAACTATATACATGATTAATTT-------------G----AA--TTTATTTACAACG-CTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTAT-TT-AT-TCGAGTATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGATGTCAACAAG-TGAACTTAAG-----AAC-AATAGTGAAA |
| Mus_musculus_1 | mmu-mir-133a-2:1-104 + | ----AG----AA----------------------------------GCCAAA-------------TG-CTTTGCTGAAGCTGGT-AAAATGGAACCAAATCAG-CTG-TT-GGATGGATTTGGTCCCCTTCAACCAGCTGTAGC-TGCGCATTGATCACGCCGCA------------------------------ |
| Mus_musculus_3 | mmu-mir-133b:1-119 + | ----CCTCCAAA----------------------------------GGGA-GTGGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTC-TTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAAAGCTCAA-T--ATTTG-----------------GAGA |
| Mus_musculus_2 | mmu-mir-133a-1:1-68 + | ----G--------------------------------------------------------------------CTAAAGCTGGT-AAAATGGAACCAAATCGC-CTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC--------------------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-133a:1-87 + | ----CA----------------------------------------------------------ATG-CTTTGCTAAAGCTGGT-AAAATGGAACCAAATCGC-CTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC-TATGCATTGA---------------------------------------- |
| Rattus_norvegicus_2 | rno-mir-133b:1-84 + | ----C----------------------------------------------------------------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTC-TTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAA------------------------------------- |
| Macaca_mulatta_1 | mml-mir-133a:1-87 + | ----A---------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGC-CTC-TT-CAATGGATTT-GTCCCCTTCAACCAGCTGTAGC-TATGCATTGA---------------------------------------- |
| Macaca_mulatta_2 | mml-mir-133b:1-119 + | ----CCTCAGAA----------------------------------GAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTC-TTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATTCCCAG-T--CCTTG-----------------GAGA |
| Macaca_mulatta_3 | mml-mir-133c:1-102 + | ----GG----GA----------------------------------GCCAAA-------------TG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGA-CTG-TC-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC-TGTGCATTGATGGCGCCG-------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-133a:1-87 + | ----A---------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGC-CTC-TT-CAATGGATTT-GTCCCCTTCAACCAGCTGTAGC-TATGCATTGA---------------------------------------- |
| Pongo_pygmaeus_3 | ppy-mir-133b:1-119 + | ----CCTCAGAA----------------------------------GAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTC-TTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATGCCAAG-T--ACTTG-----------------GAGA |
| Pongo_pygmaeus_1 | ppy-mir-133c:1-102 + | ----GG----GA----------------------------------GCCAAA-------------TG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGA-CTG-TC-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC-TGTGCATTGATGGCGCCG-------------------------------- |
| Gorilla_gorilla_2 | ggo-mir-133a:1-88 + | ----A---------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGC-CTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC-TATGCATTGA---------------------------------------- |
| Gorilla_gorilla_1 | ggo-mir-133b:1-110 + | GTCACCTCAGAA----------------------------------GAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTC-TTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATGCC--------------------------------- |
| Homo_sapiens_1 | hsa-mir-133b:1-119 + | ----CCTCAGAA----------------------------------GAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTC-TTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATGCCCAG-T--CCTTG-----------------GAGA |
| Homo_sapiens_3 | hsa-mir-133a-2:1-102 + | ----GG----GA----------------------------------GCCAAA-------------TG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGA-CTG-TC-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC-TGTGCATTGATGGCGCCG-------------------------------- |
| Homo_sapiens_2 | hsa-mir-133a-1:1-88 + | ----A---------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGC-CTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC-TATGCATTGA---------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:11952744-11952864 - | TTACGATG-------------------------------------------GCGTC-GCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAA-----------TCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATAAAAA-----------------------------------GAG |
| D_simulans | chr2R:10688339-10688459 - | TTACGATG-------------------------------------------GCGTC-GCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAA-----------TCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATCAAAA-----------------------------------GCG |
| D_yakuba | chr2R:17032219-17032325 + | CC---------------------------------------------------------CAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGACA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATTAAAA-----------------------------------AAG |
| D_eugracilis | scf7180000409672:857315-857459 - | TTAAATGG-------------------------------------------TCGAC-GGCAATCTCCAATGGCCACGTGTATACTCGTAGCGATAACCTGATA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATCAAACCAAGCCACTGAAAG---CTATAAAAAAA-------CTG |
| D_elegans | scf7180000491107:959925-960044 - | TTAAAGTG-------------------------------------------GCGAC-GGCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCAGCGA-GATTTGTTCAGCAATCAAAC-----------------------------------GGA |
| D_ananassae | scaffold_13266:15447223-15447345 + | TTAAAGTG-------------------------------------------GCAACCTGGAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACGTGAAA-----------TGCGAAATGTTATTGCTTGAGAATACACGTAGTTCAGAGA-GATTTGTTCAGCAATCGAAG-----------------------------------TGG |
| D_pseudoobscura | chr3:16385856-16386036 - | TTAAGATG-----------ACAGCGACGGCC-----AAGGCAATGCCGACGGCGA-CTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATA-----------TCC-GAATGTTATTGCTTGAGAATACACGTAGTTTAACAA-GATTCGTTCAGCAATCAAACTGAA--ACGGAAAGTGTCTGTGAAAGGTGTCCTTAAAG |
| D_persimilis | super_4:376928-377074 + | TTAAGATG-----------ACAGCGACGGCCACGCCACGGCAATGCCGACGGCGA-CTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATA-----------TCC-GAATGTTATTGCTTGAGAATACACGTAGTTTAACAA-GATTCGTTCAGCAATCA----------------------------------------- |
| D_willistoni | scaffold_181141:1110993-1111093 - | TTT----------------------------------------------------------------AATGGCCACGTGTATTCTTATAGCTGTAACCTGTTA-----------TACAAAATGTTATTGCTTGAGAATACACGTAGTTAACT-A-GATTCGTTCAACGGGTCAAA-----------------------------------CAA |
| D_virilis | scaffold_10468:1951-2100 - | GTACGTCGGAGCAGACACGACAGC---GGAC-----ACAACAAT-----TGGAAA-TTGGAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGTAC---------AATC--AAATGTTATTGCTTGAGAATACACGTAGTTAACA-A-GATTCTCTCAACGATCCAA------------------------------------TAA |
| D_grimshawi | scaffold_15245:16918481-16918602 - | GGAGATTG-------------------------------------------GAAAATTAAAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAC---------AATC--AAATGTTATTGCTTGAGAATACACGTAGTTAACA-A-GATTGCCTCAACGACTCCAA-----------------------------------TAA |
| Caenorhabditis_elegans | cel-mir-234:1-96 + | CAAAAA----------------------------------------------------ATGAT---------CAAACGGTATTCCAGAGTTGATAATAAAAATGCGTCAGTCCGCAA--TCTATTATTGCTCGAGAATACCCTTTGACTACTAT-G--------TGTA--------------------------------------------- |
| Caenorhabditis_briggsae | cbr-mir-234:1-96 + | GACTCT---------------A-----------------------------------GCAAAGAT-------CAAACGGTATTCCTGAGTGAATAATAAAAATGAGTC------CAT--TCTATTATTGCTCGAGAATACCCTTTGACAAGC-T----------------GAAAA-----------------------------------GTG |
| Mus_musculus | mmu-mir-137:1-73 + | CTT------------------------------------------------------------------CGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-137:1-102 + | GGCCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Macaca_mulatta | mml-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Homo_sapiens | hsa-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243249-11243353 - | CCAA----GCCAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGAC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--GCGGCAGCG- |
| D_simulans | chr3R:10237822-10237926 + | CCAA----GCCAT---------------------AGTTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGAC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--TCGGCAGCG- |
| D_yakuba | chr3R:15188577-15188681 + | CCAA----GCCAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGCC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--TCGGCAACT- |
| D_eugracilis | scf7180000409281:109534-109638 + | CCGA----TATAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTTGCC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--GTT--TCGGCATCT- |
| D_elegans | scf7180000491080:1007119-1007223 - | CCGA----CATAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTTCCCA--CTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--TCAGCAACTG |
| D_ananassae | scaffold_13340:12827611-12827739 - | ACAAGAATCCCC-TCAAAAAAGGACGATCCATCGAGTTCTTA-CGTAACTCCTCAAAG-GGCTG-TGAAATGTTGCCA--TTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGGGA--ATC-GTCAGAAAAC- |
| D_pseudoobscura | chr2:9824930-9825029 + | CC-------CCA------------------------TACTTA-CGTAACCCATCAAAC-GGTTG-TGAAATGTTGCAT--TTAT-CA-AATCATATCACAGCCAT-TTTGATGAGTTTCGTGTGG--AATGGCCAGCAATC- |
| D_persimilis | super_0:10660066-10660165 - | CC-------CCA------------------------TACTTA-CGTAACCCATCAAAC-GGTTG-TGAAATGTTGCAT--TTAT-CA-AATCATATCACAGCCAT-TTTGATGAGTTTCGTGTGG--AATGGCCAGCAATC- |
| D_willistoni | scaffold_181089:2143204-2143324 - | CCGT----TCCG-GCAAAAGATGG---------AATTTCTTA-CGTAACTCTTCAAGGGGGTTG-TGAAATGTTGCCATTTTATTCA-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGAGTATT--CCTGCAACA- |
| D_virilis | scaffold_13047:13335625-13335725 + | CCAC----TC------------------------AATTCTTG-CGTAACTCTTCAAGG-GGTTG-TGAAATGTTGCCG--TTAT-CA-AGTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--GCTTAAATT- |
| D_grimshawi | scaffold_14906:4357674-4357778 - | CCAA----GCCC------------------ACCCAATTCTTG-CGTAACTCTTCAAGG-GGTTG-TGAAATGTGGGTA--TTAT-CA-AGTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--GCT---TTCA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA----C--A------------------------GTAT-ACAGAAAGCCATCAAAGCGGTGGTTGATGTGTTGCA-AATTAT-GACTTTCATATCACAGCCAGCTTTGATGTGCTGCCTGT------T--G---CACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243115-11243212 - | CACG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CACAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_simulans | chr3R:10237959-10238056 + | CGCG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_yakuba | chr3R:15188722-15188819 + | CACG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_eugracilis | scf7180000409281:109673-109770 + | CGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_elegans | scf7180000491080:1006986-1007083 - | CGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGCTTGT-GACCTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_ananassae | scaffold_13340:12827469-12827566 - | C--A-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAAGGCTTGT-GACCTTATGT---ATTT---CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAC |
| D_pseudoobscura | chr2:9825076-9825174 + | AGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ACTC---TTGAATCATATCACAGCCAT-TTTGACGAGTTTGGGTACAGAAATTTCAA |
| D_persimilis | super_0:10659921-10660019 - | AGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ACTC---TTGAATCATATCACAGCCAT-TTTGACGAGTTTGGGTACAGAAATTTCAA |
| D_willistoni | scaffold_181089:2143062-2143162 - | TGCA-----------------------------------------------------ACTTTCTTATACCATGTCGTTAAAATGTTTGT-GACTTTATGTTGTGTC----TCTATTCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_virilis | scaffold_13047:13335778-13335875 + | TGCA-----------------------------------------------------ATTTTCTTATACCATGTCGTTAAAATGCCTGT-GACCTTATGT---ATT----TTATATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_grimshawi | scaffold_14906:4357489-4357639 - | CGTGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTTCTCCTTTGTGTGTTTCTTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGT-GACCTTATGT---ATT----TTATATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATGTCAA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA-----------------------------------------------------CAG--TATACAGAAAGCCATCAAAGCGGTGGTTGATGTGTTGC---AAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT-GCCTGT---TGCACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:8985248-8985347 + | TCTA-CCT--------------------------------CTGCTG------------TCTATTAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GACAGCCAGC-CT |
| D_simulans | chrX_random:2632466-2632565 + | TCTG-CCT--------------------------------CTGCTG------------TCTATCAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GGCAGCCAGC-CT |
| D_yakuba | chrX:12330556-12330651 - | CTTA-CCC--------------------------------CTGCTG------------TCTAGTAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGCTG-GCCAGTC-----T |
| D_eugracilis | scf7180000409631:397666-397764 + | CTTA-CCT--------------------------------TTGCTG------------TCTATTAACGCGTTAAAATGACTGTGAGCTA--TGTTG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GGCAGGCA-C-AT |
| D_elegans | scf7180000491006:2500520-2500618 + | TCTG-CTA--------------------------------CTGCTG------------TCTATTAACGCGTCAAAATGACTGTGAACTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGGTG-GGCAGGCA-C-AT |
| D_ananassae | scaffold_13047:797460-797571 + | TGTC-CCG--------------------------------CTTCTGCTTCATTACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTA--TGCGT----ATTTG-ATGTCATATCACAGCCAT-TTTGACGAGTTTGGTG-GACAGTGAAA-GT |
| D_pseudoobscura | chrXL_group1e:7000785-7000885 - | GCTA-CTG--------------------------------CTGCTG------------CACATTTACGCGTCAAAATGACTGTGAGCTA--TGTGT----TTTTG-ATCTCATATCACAGCCAT-TTTGACGAGTTTGATG-TGCAGTCCCACTC |
| D_persimilis | super_13:1553253-1553353 + | GCTA-CTG--------------------------------CTGCTG------------CACATTTACGCGTCAAAATGACTGTGAGCTA--TGTGT----TTTTG-ATCTCATATCACAGCCAT-TTTGACGAGTTTGATG-TGCAGTCCCACTC |
| D_willistoni | scaffold_180777:2053037-2053171 + | TCCCCCAATGTACCTACCCCTGCAACTGCTGTGCTTACAACTGATG------------TCCATGGTCGCGTCAAAATGACTGTGAGCTA--TGTTAACCGGTCAGAAATTCATATCACAGCCAT-TTTGACGAGTTCGATG-GGCATAC----GA |
| D_virilis | scaffold_12970:9304312-9304422 + | TCTC-TCG-----------------------CTGCTGCCAATGCTC------------CATATTGGCGCGTCAAAATGACTGTGAGCTA--TGTTGTTGCATTTGCCATTCATATCACAGCCAT-TTTGACGAGTTTGATGTGGCAGCCA----- |
| D_grimshawi | scaffold_15203:306998-307104 + | TC-----G-----------------------TTGCTATCAGTGCTC------------CATATTGGCGCGTCAAATTGACTGTGAGCTA--TGTTGTTGCAGTTGTAATTCATATCACAGCCAT-TTTGACGAGTTTGATGTGGCAGCCA----- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA-CAG------------------------------------TA------------TACAGAAAGCCATCAAAGCGGTGGT---TGATGTGTTGCAAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCTGCCTGTTGCACT-----GT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:9216892-9217021 - | CT--GGGCTGA-CCCG--A-----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCACTT---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAA-T------ACCCA-TT |
| D_simulans | chr2R:7673827-7673955 - | CT--GGGCTGA-CCCG--A-----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTT---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAA-T------CCCCA-TT |
| D_yakuba | chr2R:7742247-7742374 + | CT--GGGCTGA-CCCG--A-----G----TGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATT----GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAA-T------CCCCA-TT |
| D_eugracilis | scf7180000409663:1025828-1025957 - | GT--AGGCTGATCCCA--A-----G----GATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-AAA-T------CCCCA-TG |
| D_elegans | scf7180000491282:440692-440819 - | CT--TGGCTGA-CCTC--A-----G----GGTTGGTCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTA---TGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCATGTCATCAAT-AGG-T------CT--ATAT |
| D_ananassae | scaffold_13266:16524568-16524693 - | CCCAGTGCC------GGCGA---------GTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAA---TGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGG-TTG-T------C--CA-TC |
| D_pseudoobscura | chr3:696696-696816 + | G----GGTCGG-CCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA---------------------- |
| D_persimilis | super_2:863138-863258 + | G----GGTCGG-CCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA---------------------- |
| D_willistoni | scaffold_181009:2073162-2073280 - | AC--G---------CGAAGAGTCAGTTAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAT---CTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA---------------------- |
| D_virilis | scaffold_12875:243286-243412 + | TT--GGGCT----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAT---CTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAACTAAGTGCAGCAACT-ATTT |
| D_grimshawi | scaffold_15245:10719551-10719668 - | CC--AGCCTGC-ATAT--G-----G----TTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGGATAA---CTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA-------------------- |
| Mus_musculus | mmu-mir-184:1-69 + | CC---------------------------------------------TTTCCTTATCACTTTTCCAGCCA-GCTTTG------TGACTCT--AAGTGTTGGACGGAGAACTGATAAGGGTAGG-------------------------------------- |
| Rattus_norvegicus | rno-mir-184:1-77 + | C-------------------------------------------ACTTTCCCTTATCAGTTTTCCAGCCA-GCTTTG------TGACTGT--AAATGTTGGACGGAGAACTGATAAGGGTAAGTGACTG-------------------------------- |
| Macaca_mulatta | mml-mir-184:1-84 + | TC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCC------AGCTTTATGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Pongo_pygmaeus | ppy-mir-184:1-84 + | CC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCCAGCTTTG------TGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Homo_sapiens | hsa-mir-184:1-84 + | CC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCCAGCTTTG------TGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:8564884-8565013 + | ACTT------------------------------------------GCC---------------------------CTTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------- |
| D_simulans | chr3L:8005898-8006027 + | ACTT------------------------------------------GCC---------------------------CTTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTATCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------- |
| D_yakuba | chr3L:3348658-3348787 - | ACTA------------------------------------------GCC---------------------------CTTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------- |
| D_eugracilis | scf7180000409524:96530-96659 - | ACTA------------------------------------------GTC---------------------------CCTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAAAA------- |
| D_elegans | scf7180000491268:124838-124968 - | ACTA------------------------------------------GTC---------------------------CTTCAAAAC-CAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------A |
| D_ananassae | scaffold_13337:8074872-8075002 - | ACTC------------------------------------------GCC---------------------------TCTCCAAACACAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACTC-------------------TCGCCAATCTACTAAAATA------- |
| D_pseudoobscura | chrXR_group3a:147689-147845 - | ACTA------------------------------------------GTTAACCCTAACTCTCATCTGCCCACAAACCAACCCAAC-GAACTAA-----------TTGGGGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAGAGTTCACCCAGGAATCAAACATATTATTACTGT---GATAC-------------------CCGGAAATCTACTAAACCC------- |
| D_persimilis | super_23:151050-151206 - | ACTA------------------------------------------GTTAACCCTAACTCTCATCTGCCCACAAACCAACCCAAC-GAACTAA-----------TTGGGGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAGAGTTCACCCAGGAATCAAACATATTATTACTGT---GATAC-------------------CCGGAAATCTACTAAACCC------- |
| D_willistoni | scaffold_180949:5214317-5214457 + | ACTT------------------------------------------GCC--------CTCTCATCTGCCCACA-------AAAAC-GAACTAA-----------TTGATGGTCCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GATCG-------------------TCGG-AATCTACTAAAAAC------- |
| D_virilis | scaffold_13049:6215347-6215479 + | ACC-----------------------------------------------------------------------------AAATC-AAACTACCCCCCACTCATCTAATGATTCCAGTAAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GATTG-------------------TTGAAACTCTACTAAACCA------- |
| D_grimshawi | scaffold_15072:36258-36427 + | ACTACCAATAAAATAAAAATCCAACCAATCAACCAACCAACCAACTACC--------CACTCAT----------------------------------------CTAATGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GATTG-------------------TTGAAACTCTACTAAAAACAAATCAA |
| Mus_musculus_1 | mmu-mir-190b:1-80 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTAAATTATG--AACCAACTGAATGTCAAGCATACTCTCACAGC---AGTA---------------------AG----------------------- |
| Mus_musculus_2 | mmu-mir-190a:1-67 + | ------------------------------------------------------------------------------------------------------------------CTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAGCATATTCCTACAG------------------------------------------------------ |
| Rattus_norvegicus_1 | rno-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAGCATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Rattus_norvegicus_2 | rno-mir-190b:1-78 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TAGGTTGTTAAATTATG--AACCAACTAAATGTCAAACATT--CTCACAGCAGTGAG----------------------------------------------- |
| Macaca_mulatta_1 | mml-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Macaca_mulatta_2 | mml-mir-190b:1-79 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCTG--------------------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Pongo_pygmaeus_1 | ppy-mir-190b:1-79 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCAG--------------------------------------------- |
| Gorilla_gorilla_2 | ggo-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Gorilla_gorilla_1 | ggo-mir-190b:1-112 + | CTC-----------------------------------------------------------TC----------------------------------------CTGCCTGCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCAGGTGATTCAGCACCACCCTCTTT---------------C------- |
| Homo_sapiens_1 | hsa-mir-190b:1-79 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCAG--------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:21567099-21567236 + | T-TTGATC-------------------GCAATC---CGTGTGTGCCCTTATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCATATTTATA-AATCTTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACAGGTT-CGAC----- |
| D_simulans | chr3L:20903305-20903442 + | T-TCGATC-------------------GCAATC---CGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCATATTTATA-AATCTTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACAGGTT-CGAC----- |
| D_yakuba | chr3L:18945598-18945735 - | T-TTGATC-------------------GGAATC---CGTGAGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCATATTTATA-AATCTTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACAGGTT-CGAC----- |
| D_eugracilis | scf7180000409472:386343-386481 + | C-TTATTC-------------------GAAATC---CGCGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCATATTTATA-AATCTTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACAGGTTACGAT----- |
| D_elegans | scf7180000491255:2722765-2722902 - | TCTTGTTA-------------------GAAATA---C--GTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATTTCGCCATATTTATA-AATCTTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACAGGTTACGAT----- |
| D_ananassae | scaffold_13337:17070826-17070956 - | C-CGAATC-------------------GAAATC---TGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATTGCCATATTCATA-AATTCTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACTA------------- |
| D_pseudoobscura | chrXR_group6:2746028-2746170 - | C-TCAATT-------------------GGAATA---TTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCGTATTAATA-AATCTTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACTGGCT-TAACAATAA |
| D_persimilis | super_9:1042494-1042636 - | C-TCAATT-------------------GGAATA---TTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCGTATTAATA-AATCTTCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACTGGCT-TAACAATAA |
| D_willistoni | scaffold_180727:1082196-1082335 - | T-TTAATTA-A----------------TCAATC---TGTGTGTGCGCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACA-AGTCAAAAATTTATTATCATCTACTGGCCTACTAAGTCCCAACATAATG----------AGAGTAAAAACCACTGACG-AAAT----- |
| D_virilis | scaffold_13049:17910638-17910773 + | C-TTAATG-------------------GTTGTA---AGCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATATATATATGTAT-CGTA-AATCTTCTACTGGCCTACTAAGTCTCAATATAATG----------GGAGTAAAAACCTCAG-TA-TAAC----- |
| D_grimshawi | scaffold_10030:24062-24212 - | T-ATAACTATCGAGGAAATTTACATAAATGTGCTAAAGCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATAAAGACCTTTA-TCGTA-AATCTTCTACTGGCCTACTAAGTCCCAATATAATG----------GGAGTAAAACCCTCA-------------- |
| Mus_musculus_1 | mmu-mir-193b:1-79 + | G-G-----------------------------C---C--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTTTGTGTTTTATCCAACTGGCCCACAAAGTCCCGCTTTTGGGG-----------------------------TCA------ |
| Mus_musculus_2 | mmu-mir-193a:1-66 + | G---------------------------------------------------AGAGCTGGGTCTTTGCGGGCAAGAT-----------------GAGAGTG--T-CAGTTCAACTGGCCTACAAAGTCCCAGTCCTC----------------------------------------- |
| Rattus_norvegicus | rno-mir-193:1-86 + | G-CGGA-C-------------------GGGAGC---T--------------GAGAGCTGGGTCTTTGCGGGCAAGAT-----------------GAGGGTG--T-CAGTTCAACTGGCCTACAAAGTCCCAGTCCTCGGC---------------------------T-CC-C----- |
| Macaca_mulatta_1 | mml-mir-193b:1-83 + | G-TGG--------------------------TC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTTTATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTTGGGG-----------------------------TCAT----- |
| Macaca_mulatta_2 | mml-mir-193a:1-85 + | G-G---AT-------------------GGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAGGGTG--T-CGGATCAACTGGCCTACAAAGTCCCAGTCCTCGGC---------------------------C-CCCG----- |
| Pongo_pygmaeus_2 | ppy-mir-193a:1-88 + | C-GAGGAT-------------------GGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAAGGTG--T-CGGATCAACTGGCCTACAAAGTCCCAGTCCTCGGC---------------------------C-CCCG----- |
| Pongo_pygmaeus_1 | ppy-mir-193b:1-83 + | G-TGG--------------------------TC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTTTATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTTGGGG-----------------------------TCAT----- |
| Gorilla_gorilla_2 | ggo-mir-193b:1-112 + | G-GAGGTT-------------------GTGGTC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTTTATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTTGGGGTCATTCTGGACAGCGAGGGAC------T-CAGG----- |
| Gorilla_gorilla_1 | ggo-mir-193a:1-111 + | G-ACGCACCCCG---AACTCCGAGGATGGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAGGGTG--T-CGAATCAACTGGCCTACAAAGTCCCAGTTCTCGG--------------------CCCCCGGGA-CCAG----- |
| Homo_sapiens_1 | hsa-mir-193b:1-83 + | G-TGG--------------------------TC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTTTATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTTGGGG-----------------------------TCAT----- |
| Homo_sapiens_2 | hsa-mir-193a:1-88 + | C-GAGGAT-------------------GGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAGGGTG--T-CGGATCAACTGGCCTACAAAGTCCCAGTTCTCGGC---------------------------C-CCCG----- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:18022237-18022366 + | CCACGT----CCGGAAC-----CGAAAGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------------------------------------------------------------------------------------CCAGCCATTGTTCCATC |
| D_simulans | chrX_random:4635946-4636075 + | CCACGT----CCGGAAC-----CGAAAGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------------------------------------------------------------------------------------CCAGCCATTGTTCCATC |
| D_yakuba | chrX:16646312-16646441 + | CCATGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA-------------------------------------------------------------------------------------CCAGCCATCGTCCCATA |
| D_eugracilis | scf7180000408176:660268-660428 - | CTGCGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGA------------------ATAGA----AC--CAAAAACGAGAACCAGCA-GC-----------------C-A-A----------CCAATCATCATCCAATA |
| D_elegans | scf7180000491193:230657-230827 + | CTGCGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGATTAACCAGCACCACAAGCACCAA--AAGCACCAAA--AGC--AGCAG--------------------------------------CAGCCATCATCCAATA |
| D_ananassae | scaffold_13335:1603991-1604112 - | GCGTT-------------------AACGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACCAA---------------------------------------------------------------------TCA-A----------CTGACCACCAG---ATC |
| D_pseudoobscura | chrXL_group3a:1970441-1970623 - | ATATGT----GA-TT--TAGCTCGATCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--TTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA------------------ACTAAACAAAC--CAAAAAGGA--AGTTGAACGCCTAATGCAATCGATGAGT-G-TTG-GGTTGCTTCAGTTT---------C |
| D_persimilis | super_11:2708510-2708698 + | ATATGT----GA-TT--TAGCTCGATCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--TTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA------------------ACTAAACAAAC--AAAAAAGGA--AGTTGAACGCCTAATGCAATCGATGAGT-G-TTG-GGTTGCTTCAGTT-TCATTCC--A |
| D_willistoni | scaffold_181096:12033222-12033334 + | CAATCG----CAAAAGC-----ATAACGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCAGAAAACGACCAG------------------------------------------------------------------------------------------------------ |
| D_virilis | scaffold_12928:1257190-1257317 - | TATATT----T---AAA-----CGAGCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTC--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGACCAGAGAAACAGCGAA---------------------------------------------------------------------T-A-T----------TTAACTATTTTTC---C |
| D_grimshawi | scaffold_15203:8453543-8453644 + | ---------------------------GGAGCTTATTG-GAGCTGCTGG-CCACTGCACAAGATTAGA--TTCAAAAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGACCAGATAA----CAT-------------------------------------------------------------------------------------CAAGCCAT--------- |
| Mus_musculus | mmu-mir-210:1-110 + | CCGGGG----CA-GT--C-C--CTCCAGG--CTCAGGA-CAGCCACTGC-CCACCGCACACTGCGTTG--CTC--CGGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-CCCTG-GGCAGCGC--GAAC---------C |
| Rattus_norvegicus | rno-mir-210:1-110 + | CCGGGG----CA-GT--C-C--CTCCAGG--CTCAGGA-CAGCCACTGC-CCACAGCACACTGCGTTG--CTC--CGGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-CCCTG-GGCAGCGC--GAAC---------C |
| Macaca_mulatta | mml-mir-210:1-110 + | ACCCGG----CA-GT--C-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GACC---------C |
| Pongo_pygmaeus | ppy-mir-210:1-120 + | ACCCGG---GCA-GT--CTC--CTCCAGG--CGCAGGGCCAGCCCCTGCCCCACCGCACACTGCGCTGCCCCC--AAGACCACACGTGTGCCGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTGAGGCAGCGC--GACC---------C |
| Gorilla_gorilla | ggo-mir-210:1-111 + | GCCCACCCGGCA-GT--C-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GA------------ |
| Homo_sapiens | hsa-mir-210:1-110 + | ACCCGG----CA-GT--G-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GACC---------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:17308091-17308220 + | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAACCAAATCA |
| D_simulans | chr3L:16646167-16646296 + | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAACCAAATCA |
| D_yakuba | chr3L:16762572-16762701 - | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAACCAAATCA |
| D_eugracilis | scf7180000409711:25996-26125 - | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAGCCAAATCA |
| D_elegans | scf7180000490993:219049-219178 + | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------AGCAACCAATTCA |
| D_ananassae | scaffold_13337:8265335-8265463 + | CAAA--ATATTTTGGTTAATTCAATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------ATTCAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACGA---------AGAGAACCATTTC |
| D_pseudoobscura | chrXR_group6:9338098-9338227 - | ATCAAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATCCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCC---------AGCAACCAAAATC |
| D_persimilis | super_35:387455-387584 + | ATCAAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATCCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCC---------ATCAACCAAAATC |
| D_willistoni | scaffold_180955:2086476-2086593 + | AA---AATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TTTCAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATAAGAATACA------------------CCCAATAA |
| D_virilis | scaffold_13049:5991414-5991542 - | GTATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TTTCAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATGAGAATCCAACCC---------A-CAACCAAACAA |
| D_grimshawi | scaffold_15110:13121815-13121944 + | TAACAAACA-TTTGGTGAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TTTCAAAAACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATACAACAC---------AAAAATCAAAACA |
| Mus_musculus_1 | mmu-mir-219-1:1-110 + | CCGT---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTCTGGCT----CCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGGGG--------G |
| Mus_musculus_2 | mmu-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGTTGAGCTCCGGG------------------------------ |
| Rattus_norvegicus_1 | rno-mir-219-2:1-96 + | ACTC-----------------AGGGGCTTCACCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGTTGAGCTCCGG------------------------------- |
| Rattus_norvegicus_2 | rno-mir-219-1:1-110 + | CTGT---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTCTGGCT----CCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGGGG--------G |
| Macaca_mulatta_1 | mml-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGG------------------------------G |
| Macaca_mulatta_2 | mml-mir-219-1:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCT----CTGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGGGG--------G |
| Pongo_pygmaeus_2 | ppy-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGG------------------------------G |
| Pongo_pygmaeus_1 | ppy-mir-219-1:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCC----CCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGCGG--------G |
| Gorilla_gorilla | ggo-mir-219:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCT----CCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGCGG--------G |
| Homo_sapiens_1 | hsa-mir-219-1:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCT----CCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGCGG--------G |
| Homo_sapiens_2 | hsa-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGG------------------------------G |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:9289926-9290048 - | GTG-------TGCCGCCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_simulans | chr3R_random:533427-533549 - | GTG-------TGCCGTCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_yakuba | chr3R:13598006-13598135 - | GTGCTAGATGTACGATGTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_eugracilis | scf7180000409802:705185-705307 + | ATA-------TCGTGTCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTGCAACAA------------AGAAA |
| D_elegans | scf7180000491047:1912675-1912796 + | GTG-------TATCAGTTACTTA------------------------------------------------C---CAAGTGCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAACAT------------T-GAA |
| D_ananassae | scaffold_13340:1848657-1848824 - | GAG-------T-------ACTTAGCCCCAACCATTGGTAAATATTGATTTTATACTTACATTA-CTTCCTGC---GAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGCAA------AATACAAGGAA |
| D_pseudoobscura | chr2:16736618-16736739 - | T-A-------TCTTGTGCATTTT------------------------------------------------G---GCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAG------------TGAAA |
| D_persimilis | super_0:3659179-3659300 + | T-A-------TCTTGTGCATTTT------------------------------------------------G---GCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAG------------TGAAA |
| D_willistoni | scaffold_181130:6363211-6363342 - | GAT-------GGATCAATACTTA-----------------------------------CTTGAA-------CGAAGCGTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTT------------GGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGACTTTACCTACTT------------AAAAA |
| D_virilis | scaffold_12855:2861518-2861626 + | T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTAGTTTTCCACCAGCAACAAT-T---AGAAA |
| D_grimshawi | scaffold_14906:3807816-3807948 - | TTG-------TGGCACTTACTT---------------------------------------GAGCTT-----GATGCGTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGAATTTTCCAACAA------TGT---GCGAG |
| Caenorhabditis_elegans | cel-mir-252:1-98 + | TCC-------AGGGGTCTCTT-------------------------------------------------------------TCAGTTATAAGTAGTAGTGCCGCAGGTAACCGCCAGTCT----AAAAGGCTTACCTACTGCCTTC-----------TGCTT---AAAATTG---------AAATAT------------TGATG |
| Caenorhabditis_briggsae | cbr-mir-252:1-99 + | AGG-------TCTCTCC------------------------------------------------------------------CAGTTATAAGTAGTAGTGCCGCAGGTAACCGCT--TCCAGAAAATTGGTTTACCTACTGCCTTCTGCTT--------------AGAATTGGGATTTTGATGACC-----------------G |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:8057863-8057982 - | AATCGAATCC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAA--C-TA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTGTGAG |
| D_simulans | chr2R_random:2148092-2148211 - | AATCGAATCC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAA--G-CA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTGTGAG |
| D_yakuba | chr2R:8893333-8893452 + | AATCGAATCC-------ATATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAT--T-CA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTATGAG |
| D_eugracilis | scf7180000409462:405753-405864 + | AA---AATTC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAAATT--C-AA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGCT----- |
| D_elegans | scf7180000491214:3592952-3593071 - | AATCCAAATCAAAATCTGAATGCGAATACGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAAGAA--TCCA----TTAA---ACACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGCTGCGCT----- |
| D_ananassae | scaffold_13266:2568740-2568853 + | CT---ATCTC-------GAATGCGAATACGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGATA--C-C-----TATA---ACACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGCTTCGCTCCGAT |
| D_pseudoobscura | chr3:418413-418523 - | AA---AACAC-------GAATGCGAATAGGT--GAATAAAGAGAGCTGTCCGTCGACAGTCAACGTA--CCAA----TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGC----AG |
| D_persimilis | super_2:605310-605420 - | AA---AACAC-------GAATGCGAATAGGT--GAATAAAGAGAGCTGTCCGTCGACAGTCAACGTA--CCAA----TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGC----AG |
| D_willistoni | scaffold_181141:3241875-3241979 + | AG---AA-----------AAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTTAAAC-GAT---TTTA---AAACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTGA--------C |
| D_virilis | scaffold_12875:19829913-19830024 + | AATCGTACCC-------AAAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTAA--C-AAA---TGTA---ATACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTTGCCC------ |
| D_grimshawi | scaffold_15245:18178188-18178294 + | AAT---TATG-------AAAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTAT--A-AAT---TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTTGC-------- |
| Caenorhabditis_elegans_1 | cel-mir-46:1-97 + | CT---GA---------------------GGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCAAGACCAC-GAGTCGTTGT---GTGCTGTCATGGAGTCGCTCTCTTCAGATGATC--CGGTC---------AAT |
| Caenorhabditis_elegans_2 | cel-mir-47:1-97 + | GA---GAGCC-------GACTG--------A--AACTGAAGAGAGCAGTCTATTGACAGTCGGT-TACTC-GAA---ATCT---TTACTGTCATGGAGGCGCTCTCTTCAGATGATGTCTGGCCC----------- |
| Caenorhabditis_briggsae_2 | cbr-mir-47:1-93 + | TA---GCTGA-------GG----------AA--GACTGAAGGGAGCTTTCTTTTGACAGTTCGATTT--C-GAA-------CTCTTACTGTCATGGAGGCGCTCTCTTCAGGTGAACTCTGGCTC----------- |
| Caenorhabditis_briggsae_1 | cbr-mir-46:1-94 + | GA---GATAC-------AA----------GTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCGCTT------G----TTTCAT-GTGCTGTCATGGAGTCGCTCTCTTCAGATGATCTGAATCTA----------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:8057643-8057764 - | CTTTCA----GATCCTCCGCGAATTGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AGACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-AT |
| D_simulans | zdp42d09.g1:294-416 + | CTTTCA----GATCCTCCGCGAATTGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AGACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-AT |
| D_yakuba | chr2R:8893539-8893660 + | CTTTCA----GATCCCCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----ATACCA---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAGGCGACGA--TT-AG |
| D_eugracilis | scf7180000409462:405955-406077 + | GTTCCA----GATCCTCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTGA----ATACTG---ATTATAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TG-AT |
| D_elegans | scf7180000491214:3592750-3592874 - | ATCCCA-AAGGACTTCCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AAACTG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-TC |
| D_ananassae | scaffold_13266:2568922-2569043 + | CCGCAA---GGATACTCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTAA-A--ACACGG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--T---- |
| D_pseudoobscura | chr3:418209-418322 - | TAT-------AATACTGAACGAATAGTGA-AATAAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----A-TCAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGA------- |
| D_persimilis | super_2:605106-605226 - | TTTTCTGTATAATACTGAACGAATAGTGA-AATAAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----A-TCAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGA------- |
| D_willistoni | scaffold_181141:3242068-3242181 + | TC-----------------CGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCC-AG-TTTAATACATCCGA---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAATCGACGG--TT-TT |
| D_virilis | scaffold_12875:19830099-19830219 + | CTAACC----AAAC--TTGCGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-CTA------TACAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGACTTT-AT |
| D_grimshawi | scaffold_15245:18178374-18178494 + | GTTTCA---CAACAAATTACGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTAT----ATACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGA--T---- |
| Caenorhabditis_elegans_1 | cel-mir-46:1-97 + | CTGA--------------------GGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCAAGACCA--------CGAGTCGTTGT-GTGCTGTCATGGAGTCGCTCTCTTCAGATGAT--CCG----------G--TCAAT |
| Caenorhabditis_elegans_2 | cel-mir-47:1-97 + | GAGAGC-------------CG---ACTGAAACTGAAGAGAGCAGTCTATTGACAGTCG--G-TTA-----C-TCGA---AATCT-TTACTGTCATGGAGGCGCTCTCTTCAGATGATGTCTGG-------------C-CC |
| Caenorhabditis_briggsae_2 | cbr-mir-47:1-93 + | TAGCTG-A----------------GGAAG-ACTGAAGGGAGCTTTCTTTTGACAGTTC-GA-TTT--------CGA---AC--TCTTACTGTCATGGAGGCGCTCTCTTCAGGTGAACTCTGG-------------C-TC |
| Caenorhabditis_briggsae_1 | cbr-mir-46:1-94 + | GAGATA-------------CA---AGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTC-GC-TTG--------------TTTCATGTGCTGTCATGGAGTCGCTCTCTTCAGATGATCTGA-----------A--TC-TA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:15401974-15402103 + | AG-----AGAAA------------AGTG----------------------T-CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCA-CCAT- |
| D_simulans | chrX_random:4022807-4022936 + | AG-----AGAAA------------AGTG----------------------T-CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCA-CCAT- |
| D_yakuba | chrX:9587590-9587719 + | AG-----AGAAA------------AGTG----------------------T-CACCTTACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCA-CCAT- |
| D_eugracilis | scf7180000409533:551298-551429 + | AG-----AGAAA------------AGTG----------------------TCCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAGATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCA-CCAAA |
| D_elegans | scf7180000491023:1180304-1180433 - | GG-----AGAAA------------AGTG----------------------T-CACATCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGTCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCAA- |
| D_ananassae | scaffold_12929:2900376-2900509 - | GT-----GTTACAGT--GTTCA--------------------C---------CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTGATTAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTCGAATTGCATTTTATCA-CCAA- |
| D_pseudoobscura | chrXL_group1a:976013-976147 + | AG-----AGAA-AGCGAC------------------------GTCACGATT-CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAG-CAAGATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCA-- |
| D_persimilis | super_26:1090677-1090833 + | AGAG-CG-----AACGAG--AGAGAGTGCCAGAGAAAGCGACGTCACGATT-CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAG-CAAGATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCA-- |
| D_willistoni | scaffold_180702:1594772-1594907 - | GAGT-GC----GAGTGGG--AG--------------------G-------G-AGCCTAACG-AATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAGATAT---------------------TT----------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCA-CCAA- |
| D_virilis | scaffold_12970:2047646-2047770 + | ACAA-GA-----T--------------G----------------------T-CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CC--- |
| D_grimshawi | scaffold_14853:6953507-6953633 - | AGAATGA-----C--------------G----------------------T-CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCC-AAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCA-- |
| Mus_musculus_1 | mmu-mir-216a:1-72 + | TT---------------------------------------------------------------------GGTTTAATCTCAGCTGGCAACTGTGAGATGTCCC-----------TATCATTCCTCACAGTGGTCTCTGGGATTATGCTAA----------------------------------------------------- |
| Mus_musculus_2 | mmu-mir-216b:1-86 + | TT-----GGCAG---------------------------------------------------------ACTGGGAAATCTCTGCAGGCAAATGTGAT--GTCACTGAAGAAACCACACACTTACCTGTAGAGATTC-------------------------------------------T-TCAGTCTGAC---------AA-- |
| Rattus_norvegicus_1 | rno-mir-216a:1-106 + | GTTA-GC-----TATGAG------------------------T---------------------------TAGTTTAATCTCAGCTGGCAACTGTGAGATGTCCC-----------TATCATTCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TTGACCTC--------------- |
| Rattus_norvegicus_2 | rno-mir-216b:1-102 + | TGCACGT-----TGGCA---------------------------------------------------GACTGGGAAATCTCTGCAGGCAAATGTGA--TGTCACTGAAGAAATCACACACTTACTTGTAGAGATTC--------------------------------------------TTCAGTCTGACAACATCAAGCAT- |
| Macaca_mulatta_1 | mml-mir-216b:1-82 + | GC-----AGA------------------------------------------------------------CTGGAAAATCTCTGCAGGCAAATGTGA--TGTCACTGAAGAAATCACACACTTACCCGTAGAGATTC---------------------------------T-----------ACAGTCTGACA------------ |
| Macaca_mulatta_2 | mml-mir-216a:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTACGCTAAACAGAGCAATT---------------TCC-TTGCCCTCGC---------GA-- |
| Pongo_pygmaeus_2 | ppy-mir-216a:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TTGCCCTCAC---------GA-- |
| Pongo_pygmaeus_1 | ppy-mir-216b:1-82 + | GC-----AGA------------------------------------------------------------CTGGAAAATCTCTGCAGGCAAATGTGA--TGTCACTGAAGAAATCACACACTTACCCGTAGAGATTC---------------------------------T-----------ACAGTCTGACA------------ |
| Gorilla_gorilla | ggo-mir-216:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TAGCCCTCAC---------GA-- |
| Homo_sapiens_1 | hsa-mir-216a:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TAGCCCTCAC---------GA-- |
| Homo_sapiens_2 | hsa-mir-216b:1-82 + | GC-----AGA------------------------------------------------------------CTGGAAAATCTCTGCAGGCAAATGTGA--TGTCACTGAGGAAATCACACACTTACCCGTAGAGATTC---------------------------------T-----------ACAGTCTGACA------------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:11939178-11939306 - | ACTTGCCCT----------------GCCACTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AGGAGAACCCACTCAA---------TTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- |
| D_simulans | chr3L:11307954-11308082 - | ACTTGCCCA----------------GCCACTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AGGAAAACCCACTCAA---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- |
| D_yakuba | chr3L:11984774-11984902 - | TCTTGCCCT----------------ACCACTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGACAACCCACTCAA---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- |
| D_eugracilis | scf7180000409466:4030533-4030653 - | TCAC--------------------------TTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGGAAACATACTCAT---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCCT |
| D_elegans | scf7180000491193:3850551-3850671 - | CTTC--------------------------TTCGAATCGAAGAA-CTGAGCTCGATTGGTG-CATAGATATC--------AAGGGAACCCGCTCAT---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTCT |
| D_ananassae | scaffold_13337:6191341-6191461 - | GCCA----G----------------GATAATTCGAATCAAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGGAGATCCGATCAT---------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA------ |
| D_pseudoobscura | chrXR_group6:1929779-1929903 - | TCTTACAAT----------------TACAGTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGAGGACTCGCTAATT--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA------ |
| D_persimilis | gnl|ti|738578230:636-763 + | TCTTACAAT-------------T--TACAGTGGGAATCGAAGAACCTGAGATCGATTGGTG-CATAGATATC--------AAGAGGACTCGATAATT--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA------ |
| D_willistoni | scaffold_180949:5768880-5769006 + | ACAA----------------------ATTGTTCGAATTAAAGAA-CTGAGATCGATTGGTG-CATAGATAAT--------ATGCGAATTCTATCATTTGATTTCATTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATTAGAACCAATCAACAAG------ |
| D_virilis | scaffold_13049:21101427-21101556 + | ATGCAC-----------------CAGCCAGTTCAAATTGAAGAA-CTGAGATCGATTGGTG-CATAGATATC----GC--CCAAAAAGTAATTCAT---------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTCGAACCGATCAGCGGCGCATC- |
| D_grimshawi | scaffold_15110:22570097-22570226 - | ATGTAG-----------------CAGCCAGTTCAAATTGAAGAA-CTGAGATCGATTGGTG-CATAGATATC----GTCCAAG--AATAATTTA-AT--------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTGTATTGGAACCGATCAGCGGCGCATT- |
| Mus_musculus_1 | mmu-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Mus_musculus_3 | mmu-mir-29b-1:1-71 + | AG--------------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCT--------------------------- |
| Mus_musculus_2 | mmu-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Mus_musculus_4 | mmu-mir-29a:1-88 + | ACCC-----------------CTT-----------AGAGGATGA-CTGATTTCTTTTGGTG-TTCAGAGTCA---------ATA---------------------GAATTTTCTAGCACCATCTGAAATCGGTTATAATGATTGGGGA----------------- |
| Rattus_norvegicus_1 | rno-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Rattus_norvegicus_4 | rno-mir-29a:1-88 + | ACCC-----------------CTT-----------AGAGGATGA-CTGATTTCTTTTGGTG-TTCAGAGTCA---------ATA---------------------GAATTTTCTAGCACCATCTGAAATCGGTTATAATGATTGGGGA----------------- |
| Rattus_norvegicus_2 | rno-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTTGGT----GG----------------- |
| Rattus_norvegicus_3 | rno-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Macaca_mulatta_1 | mml-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Macaca_mulatta_2 | mml-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Macaca_mulatta_3 | mml-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Macaca_mulatta_4 | mml-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Pongo_pygmaeus_4 | ppy-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Pongo_pygmaeus_2 | ppy-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Pongo_pygmaeus_3 | ppy-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Pongo_pygmaeus_1 | ppy-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Gorilla_gorilla_2 | ggo-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Gorilla_gorilla_3 | ggo-mir-29c:1-112 + | GGGAGCACCACTGGCCCATCTCTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGAAAAGCAG---------- |
| Gorilla_gorilla_4 | ggo-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Gorilla_gorilla_1 | ggo-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Homo_sapiens_1 | hsa-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Homo_sapiens_4 | hsa-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Homo_sapiens_3 | hsa-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Homo_sapiens_2 | hsa-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19569882-19569987 - | TATTGGC-GCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_simulans | chr2L:19257947-19258052 - | TATTGGC-GCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_yakuba | chr2R:6066940-6067043 - | T--TGGC-GCATTCACGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_eugracilis | scf7180000409752:567590-567697 - | TATTGGC-GCATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTTT--TCCGCCTTGCGAGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_elegans | scf7180000491046:3394697-3394802 + | TATTGGC-GCATTCCTGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCCCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_ananassae | scaffold_12916:12013650-12013754 + | TATTGGC-ACATTCCTGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT----CCATTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTTATGTATCGTACA |
| D_pseudoobscura | chr4_group5:1152486-1152589 + | TATTGGC-ACATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT-----TGCTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTCGGCGTAATGTATCGTACA |
| D_persimilis | super_5:5559971-5560074 + | TATTGGC-ACATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT-----TGCTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTCGGCGTAATGTATCGTACA |
| D_willistoni | scaffold_180708:4284676-4284781 + | CA-CGAC-ACATTCATGCTGAGCTCACAAAGTGGTTGTGAAATGCATTAT---TTGCTTTATCCAGCATATCACAGCCAGCTTTGATGAGCTCTGCGTAATGTGAATTGCA |
| D_virilis | scaffold_12723:2960768-2960874 - | GATTGGC-ACATTCATGCTGCGCTCTCAAAGTGGTTGTGAAATGCATTTG--AAAGCTTTGCGC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTCACGTACA |
| D_grimshawi | scaffold_15126:521642-521748 + | T--TGGC-ACATTCATGCTGCGCTCTCAAAGTGGTTGTGAAATGCATTTTTGAAAGCTTTGCGC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTAAACTACt |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAA--ACAGTATACAG--AAAGCCATCAAAGCGGTGGTTG-ATGTGTTGC---AAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT--GCCTGTTGCACTGT--- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19569475-19569576 - | TGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_simulans | chr2L:19257527-19257628 - | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_yakuba | chr2R:6066549-6066650 - | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_eugracilis | scf7180000409752:567171-567272 - | CGC-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_elegans | scf7180000491046:3395094-3395195 + | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_ananassae | scaffold_12916:12013971-12014072 + | GGC-ACGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_pseudoobscura | chr4_group5:1153071-1153173 + | TATTATGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_persimilis | super_5:5560564-5560666 + | TATTATGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_willistoni | scaffold_180708:4285049-4285146 + | ------GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_virilis | scaffold_12723:2960501-2960597 - | ------GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCGACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_grimshawi | scaffold_15126:521944-522043 + | TTT---GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCGACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAGAACA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAA-ACAGTATA-----CAGAAAGC--CATCAAAGCGGTGGTTGATGTGTTGCAAATTATGAC--TTTCATATCACAGCCAGCTTTGATGTGCTGC-CTGTTGCACTG-----T |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:8258601-8258707 - | CAAAA----TAAC-------TAAAAACTTCAACTGTCTTCAAAGTGGCAG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCT----------------------CGTCCGGC |
| D_simulans | chr2L:8042700-8042806 - | CAAAA----GAAC-------TGAAAACTTCAACTGTCTTCAAAGTGGCGG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCA----------------------CGCCCGAC |
| D_yakuba | chr2L:10894231-10894336 - | GGAAA----AAG--------TGAAAACTTCAACTGTCTTCAAAGTGGCGG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCT----------------------CGCCAACC |
| D_eugracilis | scf7180000409461:268300-268413 - | AGAAGTGAAGGTGA---ATGTGAGAACTGCAACTGTCTTCAAGGTGGCGG-TGAAATGTTGTTAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTCTTTCTA----------------------ACTC-GA |
| D_elegans | scf7180000491338:639705-639825 + | TATAA----ATTAT---ATGTAAAAACTGCAACTGTCTTCAAGGTGGCGG-TGACATGTTGTTAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTCTTTTTATCTCCTTGA------------AATCGGGC |
| D_ananassae | scaffold_12916:6006043-6006142 + | CAGAT----TTTT----TT-AGGGAACTGCGACCCTCCTTAAAGTGGCGG-TGACATGTAGCTTTC----A------TA-TTCATATCACAGCTTTGCTTTCAGGAGC-----GTTGAGGTTTCTC------------------------------- |
| D_pseudoobscura | chr4_group3:3919027-3919154 + | CCCAT----GGGATACTATAGGAAAGCTGCGACGCTCTTTAAAGTGGCGG-TGACGTGTTGGTAATA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGCCCTTCTG--------AAAATATGCGCCTCATTGGGG |
| D_persimilis | super_1:5401823-5401939 + | CCCAT----GGGATACTATAGGAATGCTGCGACGCTCTTTAAAGTGGCGG-TGACGTGTTGGTAATA---A------TA-TTCATATCACAGCC-AGCTTTGA-GAGC-----GTTGCGGCCCTTCTG--------AA-AT---------ATGCGCC |
| D_willistoni | scaffold_180703:495398-495497 + | TGTAA----ATTA-------TAGAATTTATGATAGATTTTTAATCATGGT-TTGAGTCAAAATTAA----ACAAAAATAGTTTAAATAAAAGCA-AAT-ATA-GTAAT-----ATTTTTGTT---------------------------------TT |
| D_virilis | Unknown | ------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| D_grimshawi | scaffold_15252:13434449-13434542 - | TTCAA----TAGC----AA-GGAAATTCTTGGTTTTCTTTTGTTTATCGG-GAAAATGTTATATAA----A------CC-TATATATCTTT----ATCTCT----------------AGATCTCTCA----------------------CTATTTGC |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAAC----AGTATA---C-AGAAA---------GCCATCAAAGCGGTGGTTGATGTGTTGCAAATTATGA------CT-TTCATATCACAGCC-AGCTTTGATGTGCTGCCTGTT----------------------------------GCACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19570167-19570279 - | ATCGAAA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_simulans | chr2L:19258228-19258340 - | ATCGAAA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_yakuba | chr2R:6067209-6067321 - | ATCGAAG-----------------------------------------CAAGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTCTGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGACAAAAA- |
| D_eugracilis | scf7180000409752:567897-568009 - | ATCGAAG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_elegans | scf7180000491046:3394363-3394475 + | ATCGAAG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGACAAGAA- |
| D_ananassae | scaffold_12916:12013302-12013412 + | C----CA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCAAT-GCTCAAGACAAAAAA |
| D_pseudoobscura | chr4_group5:1152145-1152298 + | ACCCAAAGAACCCAAAGCCTCGGGTCTCGGGGCCCCCGTGTCCGGGCCAAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAAGACAAAAG- |
| D_persimilis | super_5:5559630-5559783 + | ACCCAAAGAACCCAAAGCCTCGGGTCTCGGGGCCCCCGTGTCCGGGCCAAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAAGACAAAAG- |
| D_willistoni | scaffold_180708:4283205-4283312 + | ---GAGG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCAATGGCTCAAGTTA----- |
| D_virilis | scaffold_12723:2961084-2961203 - | AGCGAGAGA----------------------------------GAGAGAAAGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTACTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAGCACAAAAA- |
| D_grimshawi | scaffold_15126:521314-521426 + | GAGAGAG-----------------------------------------AGAGAGAATTGTGTCCTTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTACTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAACACAAAAA- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TA---AA-----------------------------------------C---AGTATACAGAAAGCCATCAAAGCGGTGGTTGA-TGTGTTGCAAATTATGACT-TTCATATCACAGCCAGCTTTGATGTGCTGCCTGTT-GCACTGT-------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243451-11243582 - | TGCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGAT-AGCAAA-A------------------------------------------TG--------------TGACC |
| D_simulans | chr3R:10237596-10237727 + | TGCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGAT-AGCAAA-G------------------------------------------TG--------------TGACC |
| D_yakuba | chr3R:15188346-15188476 + | TTCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGTAA--G------------------------------------------TG--------------CGACC |
| D_eugracilis | scf7180000409281:109326-109438 + | TA--------------------TTCCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AAAAAGATATTTCTGCTTTT---GA--TTCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGCA------------------------------------------------------------------- |
| D_elegans | scf7180000491080:1007311-1007443 - | TGTGA-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGCATTTT------------------------------------------TG--------------TGACC |
| D_ananassae | scaffold_13340:12827820-12827951 - | TGCGTTT-----AG--CGACGTATCTACGAAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AG--AGATATTTCTGCATTT---GA--AGTGTATCACAGCCAGCTTTGATGGGCATTGCAATAAGCCTAGAT-TCCGATTG----------------------------------------------------------AA-AC |
| D_pseudoobscura | chr2:9824664-9824803 + | TGCGTGCGTGCTTGCGTATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGA------AGAAAGATATATTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-TGCAGTTT-------------------------------------------------------------CG |
| D_persimilis | super_0:10660285-10660410 - | TGCGT------------ATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGA------AGAAAGATATATTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-TGCAGTTT--------------------------------------------------------------- |
| D_willistoni | scaffold_181089:2143458-2143641 - | TGTGT---------------GTGAA-TTGCGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGTTTTGCATTTTTCCCCTCATTATTCGCCACACACTCTGGGAGTACCAGCCAACAGAGACAGAGAGCGAGCGAC- |
| D_virilis | scaffold_13047:13335413-13335531 + | TGT-----------------------ACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-------GAATGATATATCTGCAATT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAACG-T-AGCAGAAA------------------------------------------AG--------------TAACA |
| D_grimshawi | scaffold_14906:4357869-4357995 - | TGTGT-----------GTTTGTGTGTACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-------GAATGATATATCTGCAATT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAATG-T-AGCAAA-A------------------------------------------AG--------------AG--- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAAC-----------A-----------GTAT----A--CAGAAAGCCATCAAAGCGG----TGGTTGATG-------TGT-TGCAAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT--GCCTGT----------TGCACTGT--------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:5508741-5508858 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_simulans | chr2R:4140609-4140726 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAG--C |
| D_yakuba | chr2L:18140631-18140748 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_eugracilis | scf7180000409209:654058-654175 + | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_elegans | scf7180000491107:1596303-1596420 + | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAT--C |
| D_ananassae | scaffold_13266:12795467-12795585 - | AAGTTAG--CAG-------CCTTTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGA--C |
| D_pseudoobscura | chr3:14135687-14135806 - | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--C |
| D_persimilis | super_4:1183061-1183180 + | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--C |
| D_willistoni | scaffold_180701:3433650-3433765 - | ---TTAA--CA--------CA-TTTTGCCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTTAT-AATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--T |
| D_virilis | scaffold_12875:5789441-5789560 - | AAATAAACCGAA-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTAGTT-C-GATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAG--C |
| D_grimshawi | scaffold_15112:722942-723066 - | AAAATAA--AAGAACTAAACA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGA--A |
| Caenorhabditis_elegans | cel-mir-67:1-99 + | GATCAAA--GA-------------------TTCGTCGATCCGCTCATTCTGCCGGTTGTTATGCTATTA-T-CAGA--TTAAGCATCACAACCTCCTAGAAAGAGT-----------AGATCGATTTTAAAACTT |
| Caenorhabditis_briggsae | cbr-mir-67:1-95 + | TAGATA--------------------------TTTCGATCAACTCATTCTGCTGGTTGTTATGCTGACAATTGATG-ATTAAGCATCACAACCTCCTAGAAAGAGT-----------AGACCGATTCTATCT--T |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:13671285-13671406 - | CGATCGTATATC----AACTCCGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAGCGAG---ATC----------------------------------------- |
| D_simulans | chr2R:12409842-12409963 - | CGATCGTATAGC----ACCTCCGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAGCGAG---ATC----------------------------------------- |
| D_yakuba | chr2R:15512007-15512128 + | CGATCGTATAGC----ACCTCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------TCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CACTCAGCGAG---ATC----------------------------------------- |
| D_eugracilis | scf7180000409672:1435483-1435608 + | CGATCGTATACCCCAAAAATCTAT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTAAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATC----------------------------------------- |
| D_elegans | scf7180000491214:575197-575322 + | TGATCGTTAAAGCCTCACATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTAGA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATC----------------------------------------- |
| D_ananassae | scaffold_13266:10515593-10515725 + | CGATCATATAGCC-AAGAATCTGT-TGTTAAATTGGCAAGATGTCGGCATAGCTGACGTTGGA-------AAACG-AATTTTGA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATCGAAACT-------------------------C--------T |
| D_pseudoobscura | chr3:16483204-16483318 - | CGT------ACC----GCATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGAAGTTGAA-------AAGCG-ATCTTTGA--------------GA-----------ACGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAGTCAAC-AG---ATC----------------------------------------- |
| D_persimilis | super_4:278992-279106 + | CGT------ACC----GCATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGAAGTTGAA-------AAGCG-ATCTTTGA--------------GA-----------ACGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAGTCAAC-AG---ATC----------------------------------------- |
| D_willistoni | scaffold_180700:4557862-4557981 - | CATCATCATTA-----TCATCTGTTTTTCGAATTGGCAAGATGTCGGCATAGCTGA---TAAT-------------ATTTT--------------T---------AGAAAAGCGCTATGCT-GCATCTAGTCAGTTTATTCAATAG-AG----CAATCGACAATATTATC----------------------------------------- |
| D_virilis | scaffold_12875:16937652-16937767 - | TCGCCTC---------GCATCTGT-TGTTCAATTGGCAAGATGTCGGCATAGCTGACGTTTGA-------AAGCG-CATTTTTA--------------TA-----------GCGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAATCAACAAA---A------------------------------------------- |
| D_grimshawi | scaffold_15245:16476618-16476778 - | CTCTCGCGATTC----TCATCTGT-TGGTGAATTGGCAAGATGTCGGCATAGCTGACGTTTGA-------AAGCGCATCTT--A--------------TA-----------GCGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CACTCAAC-AT---ATCCATACCTGAAATGCTTAGAAACTTGGAGTATCTACGGATTA |
| Caenorhabditis_elegans | cel-mir-72:1-99 + | AGGTCCCGT----------------CAG-AGCTAGGCAAGATGTTGGCATAGCTGAA--TGAT---------------CGC--------------T----ATAACAACTATCAGCTTCGCC-ACATTCTGCCACG-CACTGATG-T-------GAG-------G---ACC----------------------------------------T |
| Caenorhabditis_briggsae | cbr-mir-72:1-123 + | TGGACTCGCC------------------CGAGCTAGGCAGATGTTGGCATAGCTGAAT--GCAAATCAGAAATCG-AAATTCGAAAAGTTTGAATTTCGC------GCGCTCAGCTTCGCC-ACATCGTGCCATG-CGTAGGCT-T---------------GAG---ACC----------------------------------------A |
| Mus_musculus | mmu-mir-31:1-106 + | TGCTCCTGTAACTCGG-----AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GAGAACCTGCTATGCCAACATATTGCCATC-TTTCCTGTCT-GA----CAGC-AG--------CT----------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-31b:1-118 + | TGGCCAAGCTGC----TGTCAGAC-AGGAAAGATGGCAATATGTTGGCATAGCAGG---TTCT-------------------------------CA---------GTTCAACAGCTATGCCAGCATCTTGCCTCC-TCTCCAGTTCCAAGTTTCAGG-AGCAAT---ACC----------------------------------------A |
| Rattus_norvegicus_2 | rno-mir-31a:1-106 + | TGCTCCTGAAACTTGG-----AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GAGAACCTGCTATGCCAACATATTGCCATC-TTTCCTGTCT-GA----CAGC-AG--------CT----------------------------------------- |
| Macaca_mulatta | mml-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:8887323-8887479 - | TCGCTCCACGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAACATTTT-ATCGTCCGAAAAAA---------------------TGTGATTATT-TTTG--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACTCTATCAGCGTTG |
| D_simulans | chrX:7083953-7084109 - | TCGCTCCTCGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCTCTT-ATCGTCCGAAAAAA---------------------TGTGATTATT-TTTG--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACGCTATCAACGTTG |
| D_yakuba | chrX:12425680-12425836 + | TTTCTCCTCGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCTTTG-ATCGTCCGAAAAAA---------------------TGTGAATATT-TTTT--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACTCTATCAGCGTTG |
| D_eugracilis | scf7180000408176:324239-324404 - | TTGATAAGCAT--C--AACTCCTAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGT-------TCGAGACTTTTCCTCAACCGGAAAAA---------------------TGTGAAAATTTTTTA--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTAAT-----TTGACACTATCAACGTGG |
| D_elegans | scf7180000491006:2391280-2391437 - | TGGCTCCTTAT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCAGTT-ATCGACCGAAAAAA---------------------TGTGAATATTT-TTGA-AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACACTATCAACGCGG |
| D_ananassae | scaffold_13047:712420-712562 - | ATCCTCG---------------AAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGAGGA-------TCGAGCGAGTC-ATCGACCGAG--------------------------------ACGAATTC--CA-A------AGCGGCTATGCCT-CATCTAGTCAATTACATTACT-----TTGACACTTTCCACGAGG |
| D_pseudoobscura | chrXL_group1e:8162325-8162445 - | GTGTCCT-----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA------------------------------------A------------------------GAAGATGATTTG--AA-A------TGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGATTCTATCAACGATG |
| D_persimilis | super_13:404315-404435 + | GTGTCCT-----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA------------------------------------A------------------------GAAGATGATTTG--AA-A------TGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGATTCTATCAACGATG |
| D_willistoni | scaffold_181150:794468-794638 + | TCACGAATG-----TG---ATGAAAACAACTAGTGGATTTGGCAAGATGTCGGAATAGCTGAAAGTCACACAAAATCATA-------------------------AAATGTTTGCCGTTTTGTTATTGTTGTGAATTT-TATTGATTT-CAAAAATTACGGCTATGCCT-CATCTAGTCAATTGCATTAGT-----TTGATTAAGTCAAC--TG |
| D_virilis | scaffold_12726:2775742-2775905 - | TTGCAGCACATATATATAAATATAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAAAG--TCATAAATCCAGAATT-------------------TCT---ATT---------TTGTGTATTTTTATTGAGTA-C------AGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGACAAAAGCAAC---G |
| D_grimshawi | scaffold_15203:6378282-6378443 - | TCGACCACCAT--TTGCACCCGCAAACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGACAG-CACAA--GATCACAAATCAAGAAAC-------------------TTT---ATT---------TTGTGTATTTTTATTGAGTA-C------AGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGAC---ATCAACAACG |
| Caenorhabditis_elegans | cel-mir-72:1-99 + | AGGTCCCGTC-----------------------AGAGCTAGGCAAGATGTTGGCATAGCTGAATG--------------------------------------------------------------------------AT-CGC-TATAACAACTATCAGCTTCGCCA-CATTCTGCCACG--CACTGAT-----GTGA--------GGACCT |
| Caenorhabditis_briggsae | cbr-mir-72:1-123 + | TGGACTCGCC-----------------------CGAGCTAGGC-AGATGTTGGCATAGCTGAATG-CAAATCAGA-----AATCGAAATTC----------GA-AAAG--TTTGA-ATT---------T-------------CGC-GC-G------CTCAGCTTCGCCA-CATCGTGCCATGCG--TAGGC-----TTGAGACC---------A |
| Mus_musculus | mmu-mir-31:1-106 + | TGCTCCTGTAA-CTCGG----------AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--AG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CCTGT-----------CTGACAGCAGCT |
| Rattus_norvegicus_1 | rno-mir-31b:1-118 + | TGGCCAAGCTG-----------CTGTCAGACAGGAAAGATGGCAATATGTTGGCATAGCAG---------------------------------------------------------------------------GTTCTCAG--TT-C------AACAGCTATGCCAGCATCTTGCCTCCTCT-CCAGTTCCAAGTTTCAGGAGCAATACCA |
| Rattus_norvegicus_2 | rno-mir-31a:1-106 + | TGCTCCTGAAA-CTTGG----------AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--AG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CCTGT-----------CTGACAGCAGCT |
| Macaca_mulatta | mml-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Pongo_pygmaeus | ppy-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Gorilla_gorilla | ggo-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Homo_sapiens | hsa-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:19791046-19791174 + | CT-----GAGTGCCACCAGACT-CT--------TCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--ATT-GC-TTCAGGCAA-----------TACAACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAACGCC---------------GAATG------ |
| D_simulans | chr3L:19083102-19083230 + | CT-----GAGTGCCACCAGACT-CC--------TCCTCCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--ATT-GC-TTCAGGCAA-----------TACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCC---------------GAATG------ |
| D_yakuba | chr3L:20771315-20771443 - | CT-----GAGTGCCACCAGACT-CT--------TACTCCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--ATT-GC-TTCAGGCAA-----------TACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCC---------------GAGTG------ |
| D_eugracilis | scf7180000409466:5133811-5133939 - | CC-----GAATGCCAGCAGGCT-CT--------ATCTCCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTT-------------------CCA--CTT-GC-TTCAGGCAA-----------TACAACTTCAGTGCAAACTCTGTGCATTTCACAAA-CAACGCC---------------GACGG------ |
| D_elegans | scf7180000491193:4070917-4071045 + | CC-----GGATGCCAGCAGACT-CT--------TCCTCCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--CTT-GC-CTCAGGCAA-----------TACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CATCGTC---------------GACCG------ |
| D_ananassae | scaffold_13337:19456783-19456919 - | CC-----GAATACCAGCAGACA-CTATACACCCGCCCTCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--CTT-GC-TCCAGGCAA-----------TACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCC---------------AACTT------ |
| D_pseudoobscura | chrXR_group6:5913809-5913939 + | AA-----AAACCAAACCAAACA-C-----------TCCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CAT--CTT-GATTTCAGGCAA-----------TACAACTGCAATGCAAGCTCTGTGCATTTCATAAATCAACGCCGTC------------CAATG------ |
| D_persimilis | super_47:413986-414116 + | AA-----AAACCAAACCAAACA-C-----------TCCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CAT--CTT-GATTTCAGGCAA-----------TACAACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAACGCCGTC------------CAATG------ |
| D_willistoni | scaffold_180698:8572488-8572628 + | CG-----GAACCTAAACAAATT------------------GAAGTTACACGAAGGTGCATTGTAGTCGCATTGTCTGTGCTCCAAAAAAAAAAAACCCCCA--GTTTCTATTCAGGCAA-----------TACAACTGCAGTGCAAGCTTCGTGTGACTTATAAG-CAACGGC---------------AAATA------ |
| D_virilis | scaffold_13049:22941104-22941227 - | CC-----AAAATCC----GACA------------TCTCTGGAGCTGTTACGGAGGTGCATTGTAGTCGCATTGTCTGTC-------------------TCAAATTT-GC-CCGCGGCAA-----------TACAACTGCAGTGCAAGCTCCGTGCAGTTCACACG-CAACGTC---------------GGAAG------ |
| D_grimshawi | scaffold_15110:18214439-18214590 - | CTCTGCACAGTTAGGGCAGACATC-----------TCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CAAAAATT-GC-ATGCGGCAA-----------TACAACTGCAGTGCAAGCTCCGTGCAGTTCACTAG-CAACAAC---TCTTTGATCGCTGATCGATCTGA |
| Mus_musculus | mmu-mir-33:1-69 + | CT-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT---------------------------------CTGGCAATACCTGTGCAATGTTTCCACAGTGCAT-CACGG----------------------------------------------- |
| Rattus_norvegicus | rno-mir-33:1-69 + | CC-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT---------------------------------CTGGCAGTACCTGTGCAATGTTTCCACAGTGCAT-CACGG----------------------------------------------- |
| Macaca_mulatta_1 | mml-mir-33a:1-69 + | CT-----G--------------------------------------------CGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-TACAG----------------------------------------------- |
| Macaca_mulatta_2 | mml-mir-33b:1-96 + | GC-----GGGC----------------------------------GGCCCCGCGGTGCATTGCTGTTGCATTGCACGTG-------------------TG----------------TGAGGCGGGTGCAGTGCCTCGGCAGTGCAG-CCCGGAGCCGGCCCCTGG-CACCGC--------------------------- |
| Pongo_pygmaeus | ppy-mir-33a:1-69 + | CT-----G--------------------------------------------CGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-CACAG----------------------------------------------- |
| Gorilla_gorilla | ggo-mir-33:1-69 + | CT-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-CACAG----------------------------------------------- |
| Homo_sapiens_1 | hsa-mir-33a:1-69 + | CT-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-CACAG----------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-33b:1-96 + | GC-----GGGC----------------------------------GGCCCCGCGGTGCATTGCTGTTGCATTGCACGTG-------------------TG----------------TGAGGCGGGTGCAGTGCCTCGGCAGTGCAG-CCCGGAGCCGGCCCCTGG-CACCAC--------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:5926643-5926771 + | CAAACAA-GTATTC-T-----TAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAAC------------------TTAT-----AA |
| D_simulans | chr3R:15449371-15449500 - | CAATCAAAGTATTC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAAC------------------TTAT-----GG |
| D_yakuba | chr3R:9974454-9974582 + | CAATCAA-GTATTC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAACG------------------TAC-----TC |
| D_eugracilis | scf7180000409470:260340-260477 + | AAATCAA-GTAACC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT---TTGC-CGTTG-AAA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAACGATAA--TGA-----------TAGTTTAT |
| D_elegans | scf7180000490967:803608-803743 - | CAATCAA-GTAACC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAACGATAA--TGC---------TAT-----AT |
| D_ananassae | scaffold_13340:6489967-6490093 + | TAATTCA-GTTACC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCTG--G-------TGCTCGTTG-GCAATTAATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAGAGCAAC------------------TT--------A |
| D_pseudoobscura | chr2:5019555-5019683 - | AAATCCA-GAAAAT-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--AAAT--ATTGC-CTTTG-ACC----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCCATAACAACGAT------------------------AA |
| D_persimilis | super_19:724982-725124 - | AAATCCA-GAAAAT-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--AAAT--ATTGC-CTTTG-ACC----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCCATAACAACGATAA---GCAAC-----ATAT--AATCG |
| D_willistoni | scaffold_181089:11166523-11166648 - | TAACA--------T-T-----CTATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TTAAATTGC-CAA-A-ACAA-TAAACCACAGCCACTATCTTCACTGCCGCCGCGACAGGCCATGACAACAA------------------TC-----GG |
| D_virilis | scaffold_12855:2682541-2682664 - | AAAAAAA-ATTACCTTAAATCCGATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTG-GCCA--A----------T---TG-ACA----AATCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTATGACAGCAA-------------------------AA |
| D_grimshawi | scaffold_14624:2267430-2267555 + | AAACCAA-ATTCCATT-----GAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTG-GCCA--A----------C---TG-ACA----AATCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTATGACACCAATAA-------------ATAT-----AA |
| Caenorhabditis_elegans | cel-mir-34:1-97 + | CGG------------------------ACAATGCT----CGAGAGGCAGTGTGGTTAGCTGGTTGCATA--------------TTTC----------C----TTGACAACGGCTACCTTCACTGCCACCCCGAACA------------------TGTCGTCCATCTTTG-----AA |
| Caenorhabditis_briggsae | cbr-mir-34:1-93 + | AAGCA----------------------CT----CATGGTCGTGAGGCAGTGTGGTTAGCTGGTTGCATA-CACA-------------G---------G----TTGACAACGGCTACCTTCACTGCCACCCCGAACA------------------------------TGTAGTCCTC |
| Mus_musculus_1 | mmu-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTG-C--G-----------GT---------G----CTGACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Mus_musculus_3 | mmu-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACAGCCAGGTAAA---------AAGA----------------------------CT |
| Mus_musculus_2 | mmu-mir-34a:1-102 + | CCA------------------------GCTGTGAGTAATTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GTA---------TT---AGCTAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--ATT-------GT |
| Rattus_norvegicus_1 | rno-mir-34a:1-102 + | CC------------------------GGCTGTGAGTAATTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GTA---------TT---AGCTAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTT-------GT |
| Rattus_norvegicus_2 | rno-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACAGCCAGGTAAA---------AAGA----------------------------CT |
| Rattus_norvegicus_3 | rno-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTG-C--G-----------GT---------G----CTGACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Macaca_mulatta_1 | mml-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTACAC--ATTGTGGGGCCT |
| Macaca_mulatta_2 | mml-mir-34c:1-77 + | AGT------------------------------C-TAGTTACCAGGCAGTGTAGTTAGCTGATTGCTG------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGA----------------------------TT |
| Macaca_mulatta_3 | mml-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------GT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Pongo_pygmaeus_2 | ppy-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGA----------------------------TT |
| Pongo_pygmaeus_3 | ppy-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------AT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Pongo_pygmaeus_1 | ppy-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTTGTGGGGCCC |
| Gorilla_gorilla_2 | ggo-mir-34b:1-110 + | GTGCCCG-GT----------------------GCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------GT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCACAGCATCACCGC--CGC---------CCG-----GC |
| Gorilla_gorilla_3 | ggo-mir-34c:1-108 + | TTT------------------CTATGAGTC-----TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGATTTGGGAATTCGTCCA--AATGA---GCTG |
| Gorilla_gorilla_1 | ggo-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTTGTGGGGCCC |
| Homo_sapiens_1 | hsa-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------GT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Homo_sapiens_3 | hsa-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTTGTGGGGCCC |
| Homo_sapiens_2 | hsa-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGA----------------------------TT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:857527-857647 + | CATCCGAAAC---CCCT---------------TC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_simulans | chr2L_random:38968-39087 + | CATCCGAATC---C-CT---------------CC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_yakuba | chr2L:841557-841670 + | CATCCGAGTC-----------------------C----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--G--------------CCTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_eugracilis | scf7180000409554:1584269-1584382 + | TATCACTAT-----------------------CC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C--------------GTTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCG-ATTAAATCGCCACGTGG-----------------T |
| D_elegans | scf7180000490458:433892-434014 - | ACTCCTTCA-AAA-------------------AA----------------------G-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTAAT--TGC---------AATGCTACAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTG-ATTTAAACGCCACGTGG-----------------T |
| D_ananassae | scaffold_12916:2746986-2747121 + | CCACGGAAA----------------------------AGACACCCCACGGAAACGAG-GGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAT--CGC---------AATGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-TTGCAAACGCCACGTGG-----------------T |
| D_pseudoobscura | chr4_group3:5649077-5649230 + | CATCCAAGGC---CTGTGCCTGTGT------CTG-AGAGCCCACCCACCCGAAT--A-GGGCAGCGAATTACTTGGGCCAGGGGAATTCAAACTGTGAT--CGC---------AATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTC-AAGTAAACGCCACGTGG----GT-----------T |
| D_persimilis | super_1:7140235-7140385 + | CATCCAAGGC---CTGTGCCTGTGC------TTG-AGAGCCCACCCACCCGAAT--A-AGGCAGCGAATTACTTGGGCCAGGGGAATGCAAACTGTGAT--CGC---------AATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTC-AAGTAAACGCCACGTGG------------------ |
| D_willistoni | scaffold_180772:2278802-2278947 - | AATTTAAAAC---CGTTTTCCATTTCATTTTTTG----------------------G-GGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAA--T---TATTTCAAAATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTACAATTGCGACACGTGG-----------------T |
| D_virilis | scaffold_12963:19405390-19405507 + | CATTCAAAG-----------------------TT----------------------C-GGGCAGCAAATTACTTGGGCCAAGGGAATGCAAACTGTCAA--CGC---------ATTGCAATAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCA-AC-ATAACGCCACGTGG-----------------T |
| D_grimshawi | scaffold_15252:7270330-7270448 + | C---------------------------------------------------------GGGCAGCGAATTACTTGGGCCAAGTGGATGTAAACTGTGAAAGCGCATTTTGCATATAACAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCG-AT-ATAACGCCACGTGG-----------------G |
| Mus_musculus | mmu-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Rattus_norvegicus | rno-mir-375:1-75 + | TCCG----------------------------GCC----------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGTGA----------------------------GGCAGGGG-----------C |
| Macaca_mulatta | mml-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Pongo_pygmaeus | ppy-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Gorilla_gorilla | ggo-mir-375:1-112 + | CGACCGCCA-GGCCCCGG-GCCCTCCGCTCCCGCC----------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGTGA----------------------------GGCAGGGGCGGCCTCTCAGC |
| Homo_sapiens | hsa-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:16493557-16493674 + | GA-----TTG--GTC-CTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TA |
| D_simulans | chr2R:15154934-15155051 + | GA-----TTG--GTC-CTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TA |
| D_yakuba | chr2R:12702727-12702844 - | GA-----CTG--GTC-CTCCTGGGAGTGCATTTCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TA |
| D_eugracilis | scf7180000409474:1467534-1467651 - | GA-----TTG--GCT-CTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCT---CTGCATTC-------TA |
| D_elegans | scf7180000491201:759743-759860 + | GA-----TTG--GCT-CTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TG |
| D_ananassae | scaffold_13266:4109353-4109468 - | TGGGA---------GTCCTGTGGAAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTTTATGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTCG--GCT---CATCACTC-------TA |
| D_pseudoobscura | chr3:8655644-8655762 - | GA-----TTG--GCCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCT---CTTCATTC-------TA |
| D_persimilis | super_4:2540080-2540198 - | GA-----TTG--GCCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCT---CTTCATTC-------TA |
| D_willistoni | scaffold_180700:3423572-3423692 - | AA--A---TT--GTGTGTGGT-GGAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTAATAAAATTAACAATAAATCCCTTGTCTTCTTATGGCGTGTATTTAAAGCT---CTTCATT--------TG |
| D_virilis | scaffold_12823:2295157-2295274 - | GTCGTCT--------------CCAAATGCTTTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTA---ATAACAATAAATCCCTTGTCTTCTTATGGCGCGCATTC--TGCT---CTTCATTTATAATAATT |
| D_grimshawi | scaffold_15245:15782213-15782323 + | GT-----TTA--------------AATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTA---ATAACAATAAATCCCTTGTCTCCTAACGGCGCGCATTG--TGCT---CTTCATTATTTC--TTA |
| Mus_musculus_1 | mmu-mir-7a-2:1-97 + | GG-----TCG--------------GGCCAGCCCCGTTTGGAAGACTAGTGATTTTGTTGTTGTGTCTCTGTAT---CCAACAACAAGTCCCAGTCTGCCACATGGTGCTGGTCA--------------TTT-------CA |
| Mus_musculus_3 | mmu-mir-7a-1:1-108 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAAACGACAACAAATCACAGTCTGCCATATGGCACAGGCCA------CCTCTA-----------CAG |
| Mus_musculus_2 | mmu-mir-7b:1-111 + | AG-----GAGCGGAGT---ACGTGAGCCAGTGCTATGTGGAAGACTTGTGATTTTGTTGTTCTGATAT-GAT----ATGACAACAAGTCACAGCCAGCCTCATAGCGTGGACTC-----CTATCAC-----------CTT |
| Rattus_norvegicus_1 | rno-mir-7a-1:1-97 + | TG-----TTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAGACGACAACAAATCACAGTCTGCCATATGGCACAGGCCA------CCT----------------- |
| Rattus_norvegicus_2 | rno-mir-7a-2:1-95 + | GG--A---CA--------------GACCAGCCCTGTCTGGAAGACTAGTGATTTTGTTGTTGTGTCTGTGT-----CCAACAACAAGTCCCAGTCTGCCACATGGTGTTGGTCA--------------CAT-------CA |
| Rattus_norvegicus_3 | rno-mir-7b:1-110 + | AGG----CCA--GAAC-AC--ATGAGCCAATGCTATGTGGAAGACTTGTGATTTTGTTGTTCTGATAT-GAT----ATGACAACAAGTCACAGCCAGCCTCATAGAGTGGACTC-----CCATCAC-----------CTT |
| Macaca_mulatta_1 | mml-mir-7-2:1-110 + | CTGGATA---CAGAGT-GA--AGTGGCTGGCCCCGTCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTGCCGAATGGTGCCAGCCA--------------TTG-------CA |
| Macaca_mulatta_2 | mml-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATTGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Macaca_mulatta_3 | mml-mir-7-3:1-110 + | AG--A--TTA--GAGT-GGCTATGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-GCT----ACGACAACAAATCACAGCCGGCCTCATAGCGCAGACTC-----CCTTCGA-----------C-- |
| Pongo_pygmaeus_2 | ppy-mir-7-3:1-110 + | AG--A--TTA--GAGT-GGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-ACT----ATGACAACAAGTCACAGCCGGCCTCATAGCGCAGACTC-----CCTTCGA-----------C-- |
| Pongo_pygmaeus_3 | ppy-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Pongo_pygmaeus_1 | ppy-mir-7-2:1-110 + | CTGGATA---CAGAGT-GG--ACCGGCTGGCCCCGTCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTGCCTAATGGTGCCAGCCA--------------TCG-------CA |
| Gorilla_gorilla_2 | ggo-mir-7-2:1-110 + | CTGCATA---CAGAGT-GG--ACCGGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTGCCTAATGGTGCCAGCCA--------------TCG-------CA |
| Gorilla_gorilla_3 | ggo-mir-7-3:1-110 + | AG--A--CTG--GAGT-GGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-ACT----ACGACAACAAGTCACAGCCGGCCTCACAGCGCAGACTC-----CCTTCGA-----------C-- |
| Gorilla_gorilla_1 | ggo-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Homo_sapiens_1 | hsa-mir-7-3:1-110 + | AG--A--TTA--GAGT-GGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-ACT----ACGACAACAAGTCACAGCCGGCCTCATAGCGCAGACTC-----CCTTCGA-----------C-- |
| Homo_sapiens_3 | hsa-mir-7-2:1-110 + | CTGGATA---CAGAGT-GG--ACCGGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTACCTAATGGTGCCAGCCA--------------TCG-------CA |
| Homo_sapiens_2 | hsa-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16698539-16698665 + | ATG---AGTGCCTT-AGAGTGAAG----------------------CTGACTTGCCATTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTTCTG--CAGGTCAATCG---TCAG-------AAACAAT |
| D_simulans | wck39a12.g1:600-726 - | ATG---AGTGCGTC-AGAGTGTAG----------------------CTGACTTACCATTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTTGTG--CAGATCAATCG---TCAG-------AAACA-A |
| D_yakuba | chr2R:4404406-4404531 - | ATA---AGTGAATTGAGAGTGTAG----------------------CTGCCTTGCCATTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TATACTA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTTCTG--CAGATCAATCA---TC---------AGACAAA |
| D_eugracilis | scf7180000408961:272475-272601 + | ACA---AGTGATTA-AAAGAGAAA----------------------CTGCTCTGCCGTTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTTTGG--TAGATCAATCA---TCAA-------AAATAAC |
| D_elegans | scf7180000490579:645389-645516 - | AAA---AGTGTTTAAAGAATGTGG----------------------CTGCTTGACCGTTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTTTTG--CAGATCAATCA---TCCA-------AAATAAG |
| D_ananassae | scaffold_12916:15864702-15864823 - | TAT---AGTGTTCTA-T-----AG----------------------CTGCTTAACCGATGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAA-TA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTTCCG--CAGGCCTGTCT---TCAA------GGAATAAA |
| D_pseudoobscura | chr4_group3:8443957-8444103 + | GAA---AGTGTTTA-AAAGTACAACAATCTAATCTGTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAAATA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTC-TG--TGGAAACTTCATC---C--------AAACAAT |
| D_persimilis | super_1:9895076-9895222 + | GAA---AGTGTTTA-AAAGTACGACAATCTAATCTGTGCTTAAGCCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAAATA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTC-TG--TGGAAACTTCATC---C--------AAACAAT |
| D_willistoni | scaffold_181061:28846-28963 - | GTA---ATGGA-T---------AA----------------------TGGTCTTGCCTATGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TGAC-TA-CTTCATAAAGCTAGATTACCAAAG-CATGGGCTCTGG--CTGA--CTTAATCAACGC-------AAGTGTT |
| D_virilis | scaffold_12963:12863019-12863151 - | ATA---GCCAGGATTAGA-TGAA---------------------CGCCGCACTGCCGTTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TGAA-TA-CTTCATAAAGCTAGATTACCAAAG-CATTGGCTC-TG--TGGCCAGCTTAGC---AAAGTTGTGAAACGAT |
| D_grimshawi | scaffold_14978:831072-831198 + | ATTTAAAGTGCTTC-TTCTTGGTG----------------------CCACATTGCCGTCGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TGAA-TA-CTTCATAAAGCTAGATTACCAAAG-CATCGGCGCCTG--TGGCCAGCTTA-----AC-------AAACGTT |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTA-GACATTCTC-----------------------------------------CGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGGTTTCTTTCATAAAGCTAGGTTACCAAAGCTCGGC--GTCTTGAT---------CTA------------------C |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AGA---AC-ATTCTC-----------------------------------------CGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGACGT-CTTCATAAAGCTAGGTTACCAAAGCTCGGC--GT---TCCAG-------TTC------------------G |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GGA---GGCCCGTTT-----------------------------------------CTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAA--AT---GAC-T-------CTC------------------A |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G-----------TTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AC------------------------------------- |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CGG---GGTTGGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AT---AAC---------CCC------------------A |
| Rattus_norvegicus_1 | rno-mir-9a-3:1-90 + | GGA---GGCCCGTTT-----------------------------------------CTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAA--AT---GAC-T-------CTA------------------A |
| Rattus_norvegicus_2 | rno-mir-9a-2:1-87 + | GGA---AGCGAGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AC---TCC---------TTC------------------A |
| Rattus_norvegicus_3 | rno-mir-9a-1:1-89 + | CGG---GGTTGGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AT---AAC---------CCC------------------A |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CGG---GGTTGGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AT---AAC---------CCC------------------A |
| Macaca_mulatta_2 | mml-mir-9-2:1-87 + | GGA---AGCGAGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AC---TCC---------TTC------------------A |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GGA---AGTGAGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AC---TCC---------TTC------------------A |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CGG---GGTTGGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AT---AAC---------CCC------------------A |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GGA---GGCCCGTTT-----------------------------------------CTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAA--AT---GAC-T-------CTC------------------A |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GGA---AGCGAGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AC---TCC---------TTC------------------A |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GGA---AGCGAGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AC---TCC---------TTC------------------A |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CGG---GGTTGGTTG-----------------------------------------TTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAA--AT---AAC---------CCC------------------A |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GGA---GGCCCGTTT-----------------------------------------CTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAA--AT---GAT-T-------CTC------------------A |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:12718922-12719038 + | ATC----------------------------------------------------TTGC--------------TAATTAGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCC-TT------TTTATAACTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTAACCTTCAGTACC-AC-- |
| D_simulans | chr2R:11454608-11454724 + | ATC----------------------------------------------------TTGC--------------TAATTAGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCC-TT------TTTATAACTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTAACCTTCAGTACC-AC-- |
| D_yakuba | chr2R:16257218-16257334 - | ATC----------------------------------------------------TTGC--------------TAATTAGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCC-TT------TTTATAACTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTAACCTTCAGTAGC-AC-- |
| D_eugracilis | scf7180000409672:2416246-2416361 - | AAC----------------------------------------------------TTGC--------------TAATTAGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCCTTT---T--CTTATAACTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTAACCTTCAGT----AC-- |
| D_elegans | scf7180000491214:1652880-1652996 - | AAC----------------------------------------------------TTGC--------------TAATTAGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCC-TT------TTGATAACTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTAACCTTCAGTACG-AA-- |
| D_ananassae | scaffold_13266:13876642-13876748 - | ATC----------------------------------------------------TTGC--------------TTATTTGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCC-TT---T--CTGATAACTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTAACC-------------- |
| D_pseudoobscura | Unknown_singleton_1898:47537-47693 - | AAA-----------TAACAAAAGAGGGAAACACAGTGCGGTGACGAAAACACGTTTTGC--------------T-ATTCGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCC-TT------TAGATACCTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTATCCATCATAAAT-CC-- |
| D_persimilis | super_4:6545710-6545866 + | AAA-----------TAACAAAAGAGGGAAACACAGTGCGGTGACGAAAACACGTTTTGC--------------T-ATTCGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATCC-TT------TAGATACCTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTATCCATCATAAAT-CC-- |
| D_willistoni | scaffold_180700:6381462-6381593 + | CGC----------------------------------------------------TTGC----AAAAAGATTCT-TCTTGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATTT-TGT-ACTATAGATATCTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTATCCATCATAAATCAT-- |
| D_virilis | scaffold_12875:10672387-10672513 - | ATCT----------------G---------------------------------TTTGCTTGCAAT----TACTTATTTGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATTCTTG---ATTTAAATAATTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTATACATCA---------- |
| D_grimshawi | scaffold_15245:3783124-3783258 - | ATTTTTATGTGAAATAATCAA---------------------------------TTTGC--------------T----TGCAAGGACAT----C-TGTTCACATCTTACC-GGGCAGCATT-AGATTCTTG---ATTTAAATAATTCTAATACTGTCAGGTAAAGATGTC-GTCCGTGTCCTTATCCATCATA-AA-TC-- |
| Caenorhabditis_elegans | cel-mir-236:1-98 + | TC-------------------------------------------------------------------------------GGTGACCG----ATGTCCAGCGTCTTACCTGTTCAATATTTAGACTG--ACTAT--CAAAGAGATCTAATACTGTCAGGTAATGACGCT-GGAT-TGTCATG-----------TC-AT-- |
| Caenorhabditis_briggsae | cbr-mir-236:1-100 + | AAG----------------------------------------------------TGAC--------------CAATGTCC------------------AGCGTCTTACCTGTTCAATATTTAGACTG-ACC-AA-ACCCATAGCTCTAATACTGTCAGGTAATGACGCT-GGAT-AGTCTTG-TC-----------ATTG |
| Mus_musculus_1 | mmu-mir-429:1-83 + | CC------------------------------------------------------TGC--------------TG---------------------ATGGATGTCTTACC-AGACATGGTT-AGATCT-GG---A--TGCATCTGTCTAATACTGTCTGGTAATGCCGTCCATCCACGGC--------------------- |
| Mus_musculus_3 | mmu-mir-200b:1-70 + | GC---------------------------------------------------------------------------------------------CGTGGCCATCTTACT-GGGCAGCATT-GGATAG-TGT-----C--TGATCTCTAATACTGCCTGGTAATGATGAC-GGC--------------------------- |
| Mus_musculus_2 | mmu-mir-200c:1-69 + | CC-------------------------------------------------------------------------------------------------CTCGTCTTACC-CAGCAGTGTTTGGGTGCTGG---T--TGGGAGTCTCTAATACTGCCGGGTAATGATGGA-GG---------------------------- |
| Rattus_norvegicus_1 | rno-mir-429:1-85 + | TGC----------------------------------------------------CTGC--------------TG---------------------ATGGATGTCTTACC-AGACATGGTT-AGATCT-GG---A--TGTATCTGTCTAATACTGTCTGGTAATGCCGTCCATCCATGGC--------------------- |
| Rattus_norvegicus_2 | rno-mir-200c:1-69 + | CC-------------------------------------------------------------------------------------------------CTCGTCTTACC-CAGCAGTGTTTGGGTGCTGG---T--TGGGAGTCTCTAATACTGCCGGGTAATGATGGA-GG---------------------------- |
| Rattus_norvegicus_3 | rno-mir-200b:1-95 + | CC----------------------------------------------------------------------------AACTTGGGCAG----C-CGTGGCCATCTTACT-GGGCAGCATT-GGATAG-TGT-----C--TGATCTCTAATACTGCCTGGTAATGATGAC-GGCGGAGCCCTGCACG-------------- |
| Macaca_mulatta_1 | mml-mir-429:1-83 + | CGC----------------------------------------------------CGGC--------------CG---------------------ATGAGCGTCTTACC-AGACACGGTT-AGACCT-GGC-----T--CTCTGTCTAATACTGTCTGGTAAAACCGTCCATCCGCGGC--------------------- |
| Macaca_mulatta_2 | mml-mir-200c:1-68 + | CC-------------------------------------------------------------------------------------------------CTCGTCTTACC-CAGCAGTGTTTGGGTGC-GG---T--TGGGAGTCTCTAATACTGCCGGGTAATGATGGA-GG---------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-200c:1-68 + | CC-------------------------------------------------------------------------------------------------CTCGTCTTACC-CAGCAGTGTTTGGGTGC-GG---T--TGGGAGTCTCTAATACTGCCGGGTAATGATGGA-GG---------------------------- |
| Pongo_pygmaeus_3 | ppy-mir-141:1-95 + | TGG----------------------------------------------------CCGG--------------------------CC------C-TGGGTTCATCTTCCA-GTACAGTGTT-GGATGG-TCT-AATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGC-CCCCGGGTGGGT--------------TC-- |
| Pongo_pygmaeus_1 | ppy-mir-429:1-80 + | CGC----------------------------------------------------CGGC--------------CG---------------------ATGGGCGTCTTACC-AGACATGGTT-AGACCT-GGC-----C--GTCTGTCTAATACTGTCTGGTAAAACCGTCCATCCGC------------------------ |
| Gorilla_gorilla_2 | ggo-mir-200c:1-67 + | C--------------------------------------------------------------------------------------------------CTCGTCTTACC-CAGCAGTGTTTGGGTGC-GG---T--TGGGAGTCTCTAATACTGCCGGGTAATGATGGA-GG---------------------------- |
| Gorilla_gorilla_3 | ggo-mir-429:1-111 + | CCG----------------------------------------------------GAGG--------------CCACCCACACCACCGCCGGCC-GATGGGCGTCTTACC-AGACATGGTT-AGACCT-GGC-----C--CTCTGTCTAATACTGTCTGGTAAAACCGTCCATCAGCCGC----------CTGATC-AC-- |
| Gorilla_gorilla_1 | ggo-mir-200b:1-111 + | CGGCC--------------------------------------------------CCCG--------------GACCCAGCTCGGGCAG----C-CGTGGCCATCTTACT-GGGCAGCATT-GGATGG-AGT-----C--AGGTCTCTAATACTGCCTGGTAATGATGAC-GGCGGAGCCCTGCACGC-------A-GC-- |
| Homo_sapiens_1 | hsa-mir-200b:1-95 + | CC----------------------------------------------------------------------------AGCTCGGGCAG----C-CGTGGCCATCTTACT-GGGCAGCATT-GGATGG-AGT-----C--AGGTCTCTAATACTGCCTGGTAATGATGAC-GGCGGAGCCCTGCACG-------------- |
| Homo_sapiens_3 | hsa-mir-200c:1-68 + | CC-------------------------------------------------------------------------------------------------CTCGTCTTACC-CAGCAGTGTTTGGGTGC-GG---T--TGGGAGTCTCTAATACTGCCGGGTAATGATGGA-GG---------------------------- |
| Homo_sapiens_2 | hsa-mir-429:1-83 + | CGC----------------------------------------------------CGGC--------------CG---------------------ATGGGCGTCTTACC-AGACATGGTT-AGACCT-GGC-----C--CTCTGTCTAATACTGTCTGGTAAAACCGTCCATCCGCTGC--------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:9950403-9950531 - | CCAA-AG-------TCC-T-TT--GG-CAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTG-CCATTATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC----GGAGAA--TTT |
| D_simulans | chr2L:9739846-9739974 - | CTTA-AG-------TCC-T-TT--GG-CGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTG-CCATCATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC----GGAGGA--TTT |
| D_yakuba | chr2L:12640967-12641095 - | TCCA-AG-------TCC-T-TT--GG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CAATTATGGTCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATC----GGAGGA--TTT |
| D_eugracilis | scf7180000409554:4961907-4962035 + | TTTA-AG-------TCC-T-TT--AG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCATATTGGCCCAAG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATC----GAAGGA--TTT |
| D_elegans | scf7180000491186:3003977-3004106 - | AGC-----------TCC-T-TT--GG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCATATTGGCCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATC----CAAAAAAGTGT |
| D_ananassae | scaffold_12916:13789760-13789886 - | TGA---A-------TCC-T-TTCAAG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCGATATGGCACAGA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC----AAAAGA--T-- |
| D_pseudoobscura | chr4_group3:220105-220226 + | TCCT-A---------CCGT-GT--GC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAG-CCATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC----AC--------- |
| D_persimilis | super_1:1694906-1695025 + | TCCT-A---------CCGT-GT--GC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAG-CCATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC--------------- |
| D_willistoni | scaffold_180708:12250833-12250971 - | CCAA-TCAAAATTAACA-T-TT--GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATC----GTTGGA--ATA |
| D_virilis | scaffold_12723:3996238-3996344 + | CTA-----------TCC-C-TT--GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CAATTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT--------------------------- |
| D_grimshawi | scaffold_15252:3661296-3661426 - | TTA-----------TCC-T-TG--AC-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCATTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACTTGGTGGA--TAG |
| Caenorhabditis_elegans | cel-mir-87:1-94 + | GGTTGTG-------CCA-T-CC--GG-CCGCCTGATACTTT--CGTCTCAACCTCGCTG---------TCAGATTGGTCG-------TAGGTGAGCAAAGTTTCAGGTGTGCCGGAACACACC--------------------------C |
| Caenorhabditis_briggsae | cbr-mir-87:1-95 + | GGTTGTG-------C---CCACCCGG-CCGCCTGATACTTT--CGTCTCAACCTCGCTG---------TCAGAATG--------TCGTAGGTGAGCAAAGTTTCAGGTGTGCCGGAACACACCCA------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:21472213-21472337 + | TTTCAGC-C------G--------AAT--ATAAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCA-TTTCGA---ATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGT---A-----ATAAACAACT----------------------AAAATCTATAAA |
| D_simulans | chr3R:21300457-21300581 + | TTTCAGC-C------G--------AAT--AAAAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCA-TTTCGA---ATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGT---A-----ATAAACAACT----------------------AAAATCAATAAA |
| D_yakuba | chr3R:25001360-25001484 - | TTTCGTT-C------G--------AAT--ATGAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCA-TTTTGA---ATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGT---A-----ATAAACAACT----------------------AAAATGCATTTT |
| D_eugracilis | scf7180000409682:1157943-1158071 - | TTTCAGC-C------G--------AAT--ATGAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCA-TTTTTA---ATAAACATTGCACTTGTCCCGGCCTATGGGCGATTTGT---A-----ATAATCGCCG-----TAAATATAT-------------CTATATA |
| D_elegans | scf7180000491280:3186428-3186546 + | TTTCTGG-G------G--------AAT--A--------------------------------------------TGTGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCA-TTATGA---ATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGT---A-----A-AAACAACG-----TG-----GATA-------------ACAGA |
| D_ananassae | scaffold_13340:3727762-3727906 + | TTTCCAT-C------G--------AAT--AT-AA----------------------------------------TACAAATTTCCCGTAGGACGGGAAGGTG-TCAAGGTTTTGAA-T--TAAA--TTAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGT---C-----AAACACATCGATACATATTTTTAGAAATATTTAAAATTTGGATA |
| D_pseudoobscura | chr2:23635253-23635419 - | CTTT----A-TATGC------------------ATATCCTGTAGGACAAGACTACAGTACTACTCGGAATACCATAGAGATTGCCCGTAGGACGGGAAGGTG-TCAACGTTTTAAA-TTTTGA---ACAAACATTGCACTTGTCCCGGCCTATGGGCGGCTTGT---C-----ATACACATCGAT-CGTACAACTAGCA-------------ACAAA |
| D_persimilis | super_3:6410293-6410459 - | CTTT----A-TATGC------------------ATATCCTGTAGGACAAGACTACAGTACTACTCGGAATACCATAGAGATTGCCCGTAGGACGGGAAGGTG-TCAACGTTTTACA-TTTTGA---ACAAACATTGCACTTGTCCCGGCCTATGGGCGGCTTGT---C-----ATACACATCGAT-CGTACAACTAGCA-------------ACAAA |
| D_willistoni | scaffold_181130:14578411-14578543 - | CTGTAGC-C------GGGTGAAACATTATCTGCA----------------------------------------TTCAAATTTCTCGTAGGACGGGAAGGTG-TCAACGTTTTGCC-TTATGAA--TCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGT---AAA----ACGACATC-----------CTAT---------------CAAAA |
| D_virilis | scaffold_12855:6880771-6880902 + | CGACAAT-A------TGGCT----------TTAT----------------------------------------CACAAACTGCTTGCAGGACGGGAAGGTG-TCAACGTTTTGCT-TTATGAA--TCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGT---GCCACAACAAACGATT----G-----------------AAAATATGAAAA |
| D_grimshawi | scaffold_14906:3023231-3023367 + | TTTT----T-T-------------AAT--ATATATATTCT-TAA-AC-------------------GTGTACC--ATAAATTGCTTGCAGGACGGGAAGGTG-TCAACGTTTTGCA-TTTTGAA--TCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGT---GCA----TCTACAACT-----------GGT---------------TTAAA |
| Mus_musculus_1 | mmu-mir-92b:1-83 + | GGTGGGC-G----------------------------------------------------------------------------GGAGGGACGGGACGTGGTGCAGTGTT--GTTCTT-TCCCCTGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCTCG------------------------------------------------------ |
| Mus_musculus_3 | mmu-mir-25:1-84 + | GGCCAGT-G-TTGAG-------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGC-TGCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGT--GC----CGGCC----------------------------------------------- |
| Mus_musculus_2 | mmu-mir-92a-2:1-91 + | TGCCCATTCATCCAC-------------------------------------------------------------------------AGGTGGGGATTGGTGGCATTACT-TGTG-TTAGATA--TAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAA--GAGGGTT----------------------------------------------- |
| Mus_musculus_4 | mmu-mir-92a-1:1-80 + | CTTT----C-TACAC-------------------------------------------------------------------------AGGTTGGGATTTGTCGCAATGCT--GTGTTTCTCTG--TATGGTATTGCACTTGTCCCGGCCTGTTGAG--TTTGG----------------------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-92a-2:1-92 + | TGCCCATTCATCCAC-------------------------------------------------------------------------AGGTGGGGATTAGTGCCATTACT-TGTG-TTAGATA--AAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAAAGA-GGGTT----------------------------------------------- |
| Rattus_norvegicus_4 | rno-mir-92b:1-83 + | GGTGGGC-A----------------------------------------------------------------------------GGAGGGACGGGACGCGGTGCAGTGTT--GTTCTT-TCCCCTGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCTCG------------------------------------------------------ |
| Rattus_norvegicus_2 | rno-mir-25:1-84 + | GGCCAGT-G-TTGAG-------------------------------------------------------------------------AGGCGGAGACACGGGCAATTGCT--GGACGC-TGCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGT--GC----CGGCC----------------------------------------------- |
| Rattus_norvegicus_3 | rno-mir-92a-1:1-78 + | CTTT----C-TACAC-------------------------------------------------------------------------AGGTTGGGATTTGTCGCAATGCT--GTGTTTCTG----TATAGTATTGCACTTGTCCCGGCCTGTTGAG--TTTGG----------------------------------------------------- |
| Macaca_mulatta_1 | mml-mir-92b:1-96 + | CGGGCC-------CCGGGCG-------------------------------------------------------------GGCGGGAGGGACGGGACGCGGTGCAGTGTT--GTTCTT-TCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCCCGG---CCC----------------------------------------------- |
| Macaca_mulatta_2 | mml-mir-92a-1:1-78 + | CTTT----C-TACAC-------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTTTCTG----TATGGTATTGCACTTGTCCCGGCCTGTTGAG--TTTGG----------------------------------------------------- |
| Macaca_mulatta_3 | mml-mir-25:1-84 + | GGCCAGT-G-TTGAG-------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGC-TGCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGT--GC----CGGCC----------------------------------------------- |
| Macaca_mulatta_4 | mml-mir-92a-2:1-75 + | TCAT-------CCCT-------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTG-TTCTATA--TAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA---------------------------------------------------------- |
| Pongo_pygmaeus_4 | ppy-mir-92-2:1-75 + | TCAT-------CCCT-------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTG-TTCTATA--TAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA---------------------------------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-92b:1-96 + | CGGGCC-------CCGGGCG-------------------------------------------------------------GGCGGGAGGGACGGGACGCGGTGCAGTGTT--GTTTTT-TCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCTCCGG---CCC----------------------------------------------- |
| Pongo_pygmaeus_3 | ppy-mir-92-1:1-78 + | CTTT----C-TACAC-------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTTTCTG----TATGGTATTGCACTTGTCCCGGCCTGTTGAG--TTTGG----------------------------------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-25:1-84 + | GGCCAGT-G-TTGAG-------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGC-TGCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGT--GC----CGGCC----------------------------------------------- |
| Gorilla_gorilla_2 | ggo-mir-92-2:1-75 + | TCAT-------CCCT-------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTG-TTCTATA--TAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA---------------------------------------------------------- |
| Gorilla_gorilla_3 | ggo-mir-92-1:1-78 + | CTTT----C-TACAC-------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTTTCTG----TATGGTATTGCACTTGTCCCGGCCTGTTGAG--TTTGG----------------------------------------------------- |
| Gorilla_gorilla_1 | ggo-mir-25:1-84 + | GGCCAGT-G-TTGAG-------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGC-TGCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGT--GC----CGGCC----------------------------------------------- |
| Homo_sapiens_1 | hsa-mir-92b:1-96 + | CGGGCC-------CCGGGCG-------------------------------------------------------------GGCGGGAGGGACGGGACGCGGTGCAGTGTT--GTTTTT-TCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCCCGG---CCC----------------------------------------------- |
| Homo_sapiens_4 | hsa-mir-92a-2:1-75 + | TCAT-------CCCT-------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTG-TTCTATA--TAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA---------------------------------------------------------- |
| Homo_sapiens_3 | hsa-mir-92a-1:1-78 + | CTTT----C-TACAC-------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTTTCTG----TATGGTATTGCACTTGTCCCGGCCTGTTGAG--TTTGG----------------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-25:1-84 + | GGCCAGT-G-TTGAG-------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGC-TGCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGT--GC----CGGCC----------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:21477105-21477234 + | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCATTTT-C-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-ATG--AGTGTCGCAGTCGACGATCTACACAGTGCA |
| D_simulans | chr3R:21305387-21305516 + | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCCTTTT-C-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGTCGACGATCTACACAGTGCA |
| D_yakuba | chr3R:24996445-24996574 - | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCCTTTT-C-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGTCAGCGATCTGCACAGTGCG |
| D_eugracilis | scf7180000409682:1152385-1152514 - | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCTGTTT-G-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGTCAACGATCTACACGGCCAA |
| D_elegans | scf7180000491280:3191448-3191577 + | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCTGTTT-G-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGGAGTCAACGATCTACACGTAGGG |
| D_ananassae | scaffold_13340:3732627-3732749 + | AG-----TG--C--AG-TG-----------AAGCATTA---AAACGTCACCTGATGTAGGCCGTGCCCGGTGCTTATTTGT--------T-ACT-TTT-G-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCAAAGGCAGCTATCTTCA------C |
| D_pseudoobscura | chr2:23630755-23630875 - | GT-----A---C--------AGTT-----GGAGCATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------C-GTTGTTT-G-AAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GAG--AGTGTCGCACACAAC----------GAGCT |
| D_persimilis | super_3:6405653-6405778 - | AG-----TG--C--AG-TACAGTT-----GGAGCATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------C-GTTGTTT-G-AAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GAG--AGTGTCGCACACAAC----------GAGCT |
| D_willistoni | scaffold_181130:14574160-14574279 - | TGCG----GAA----A-TT--G--------TATCTTTAAAAATACGTCACATGATGTAGACCGTGCCTGGTGCTTATTTGT--------T-GCTATTT-A-AATATA-CAAATTGCACTAGTCCCGGCCTGCA-GTA--AGTGTCGCAAACAAC--------------- |
| D_virilis | scaffold_12855:6883792-6883910 + | AG-----TG--G--TG-TG-----------CAACATTA---AAACGTCACCTGATGTAGGTCGTGCCTGGTGCTTATTTGT--------T-GTTATGC-G-AAAATC-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGCCAAC-----------GTTC |
| D_grimshawi | scaffold_14906:3026528-3026659 + | AG-----TG--A--TG-TG---GT-----GCAACATTA---AAACGTCACCTGATGTAGGTCGTGCCTGGTGCTTATTTGT--------T-GTTATGT-G-AAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAAACAACAAACAACA-ACAGCA |
| Mus_musculus_1 | mmu-mir-92b:1-83 + | GG-----TG--G--GC-GG-----------GAGGGA-----------------------------------CGGGACGTGGTGCAGTGTT-GTTCTTT-C-CCCTGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--------------------------CTCG |
| Mus_musculus_3 | mmu-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Mus_musculus_2 | mmu-mir-92a-2:1-91 + | TGCCCATTC--ATCCAC---AGGT-----------------------------------------------GGGGATTGGTGGCATTACTTGTGT--TAGAT--ATAAAGTATTGCACTTGTCCCGGCCTGAG-GAAGA--AAG-------------------AGGGTT |
| Mus_musculus_4 | mmu-mir-92a-1:1-80 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATTTGTCGCAATGCT-GTGTTT-CTCT--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Rattus_norvegicus_1 | rno-mir-92a-2:1-92 + | TGCCCATTC--ATCCAC---AGGT-----------------------------------------------GGGGATTAGTGCCATTACTTGTGT--TAGAT--AAAAAGTATTGCACTTGTCCCGGCCTGAG-GAAGA--AAA------------------GAGGGTT |
| Rattus_norvegicus_4 | rno-mir-92b:1-83 + | GG-----TG--G--GC-AG-----------GAGGGA-----------------------------------CGGGACGCGGTGCAGTGTT-GTTCTTT-C-CCCTGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--------------------------CTCG |
| Rattus_norvegicus_2 | rno-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACACGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Rattus_norvegicus_3 | rno-mir-92a-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATTTGTCGCAATGCT-GTGTTT-C--T--GTATAGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Macaca_mulatta_1 | mml-mir-92b:1-96 + | CG-----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTCTTT-C-CCCCGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--CC--------------------CGGCCC |
| Macaca_mulatta_2 | mml-mir-92a-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Macaca_mulatta_3 | mml-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Macaca_mulatta_4 | mml-mir-92a-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Pongo_pygmaeus_4 | ppy-mir-92-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Pongo_pygmaeus_2 | ppy-mir-92b:1-96 + | CG-----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTTTTT-C-CCCCGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--TC--------------------CGGCCC |
| Pongo_pygmaeus_3 | ppy-mir-92-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Gorilla_gorilla_2 | ggo-mir-92-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Gorilla_gorilla_3 | ggo-mir-92-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Gorilla_gorilla_4 | ggo-mir-92b:1-108 + | CCG----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTTTTT-C-CCCCGCCAATATTACACTCGTCCCGGCCTCCG-GCCCC--CCCGGCCCCCC---------GGCCTCCC |
| Gorilla_gorilla_1 | ggo-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Homo_sapiens_1 | hsa-mir-92b:1-96 + | CG-----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTTTTT-C-CCCCGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--CC--------------------CGGCCC |
| Homo_sapiens_4 | hsa-mir-92a-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Homo_sapiens_3 | hsa-mir-92a-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Homo_sapiens_2 | hsa-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:19558216-19558323 + | CTCTA------T---ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCAG-CGAGA |
| D_simulans | chr3L:18890412-18890519 + | CTCTA------T---ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAG-CGAAA |
| D_yakuba | chr3L:20989402-20989507 - | CTCT-----------ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAG-CGAAA |
| D_eugracilis | scf7180000409472:104906-105011 + | CTAT-----------ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCAG-CGAAA |
| D_elegans | scf7180000491249:6855005-6855110 + | CTCT-----------ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCAG-CGAAA |
| D_ananassae | scaffold_13337:17332424-17332537 - | ATCTTATATAAC---ACTATGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAG-CGAAA |
| D_pseudoobscura | chrXR_group8:7634812-7634919 + | TTCTT------C---AATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAG-CGAAA |
| D_persimilis | super_48:412952-413059 + | TTCTT------C---AATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAG-CGAAA |
| D_willistoni | scaffold_180727:842215-842322 + | CCCTC------GCATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--CATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCA----TCA |
| D_virilis | scaffold_13049:13137002-13137114 + | CGACCAGCCAGG---ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCAA-CGT-A |
| D_grimshawi | scaffold_15110:23882734-23882841 + | TGCCG------C---ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TA--AATAA--CGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCAA-CGTAA |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGT-----------A-----GACATTCTCCGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGGT-TTCTTTCATAAAGCTAGGTTACCAAAGCTCGGCG-----TCTT--GA-TC-TAC |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AGA-------------------ACATTCTCCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGAC-G-TCTTCATAAAGCTAGGTTACCAAAGCTCGGCGTTCC--------AG-T-TCG |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GGA------------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CA--CAGAG-CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAC----------TC-TCA |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G--------------------------TTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TA--TTG-G-TCTTCATAAAGCTAGATAACCGAAAGTAAAAAC------------------- |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CGG------------------GGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TG--TGGAG-TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------C-CCA |
| Rattus_norvegicus_1 | rno-mir-9a-3:1-90 + | GGA------------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CA--CAGAG-CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAC----------TC-TAA |
| Rattus_norvegicus_2 | rno-mir-9a-2:1-87 + | GGA------------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TA--TTG-G-TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------T-TCA |
| Rattus_norvegicus_3 | rno-mir-9a-1:1-89 + | CGG------------------GGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TG--TGGAG-TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------C-CCA |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CGG------------------GGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TG--TGGAG-TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------C-CCA |
| Macaca_mulatta_2 | mml-mir-9-3:1-90 + | GGA------------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CA--CAGAG-CCGCTCTCAAGCTAGATAACCGAAAGTAGAAATGAC----------TC-TCA |
| Macaca_mulatta_3 | mml-mir-9-2:1-87 + | GGA------------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TA--TTG-G-TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------T-TCA |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GGA------------------AGTGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TA--TTG-G-TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------T-TCA |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CGG------------------GGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TG--TGGAG-TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------C-CCA |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GGA------------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CA--CAGAG-CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAC----------TC-TCA |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GGA------------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TA--TTG-G-TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------T-TCA |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GGA------------------AGCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TA--TTG-G-TCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCC-----------T-TCA |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CGG------------------GGTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TG--TGGAG-TCTTCATAAAGCTAGATAACCGAAAGTAAAAATAAC-----------C-CCA |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GGA------------------GGCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CA--CAGAG-CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGAT----------TC-TCA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16698729-16698849 + | TGT--TGCTCT--------------TTTG-TTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTTTATGTAT--A-TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTCTGCATTAT---GTTTG-AGTTG---A |
| D_simulans | vom21g07.g1:730-849 + | TGT--TGCTCT--------------TTTG-TTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTATA--A-GT-A-TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTCTGCATTAT---GCTTG-AGTTG---A |
| D_yakuba | chr2R:4404225-4404345 - | GGT--TGCTCT--------------TTTG-TTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTGTTTATGT--G-TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTCTGCATTAT---GCTTG-AGTTG---A |
| D_eugracilis | scf7180000408961:272643-272761 + | AGT--TGCCTT--------------TTTG-TTTGCATATTATTTGTTCTTTGGTGATTTTAGCTGT-ATGGTTGTTTTTA-A--T-ATCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGCGTTAT---TCTTG-AGTTG---- |
| D_elegans | scf7180000490579:645222-645340 - | AGT--TCTTCT--------------TTTG-TTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTGTCT-A-A--G-TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGCATTAT---GCTTA-GTTTG---T |
| D_ananassae | scaffold_12916:15864526-15864643 - | AGT--TGCTCT--------------TTTG-TTTGCACATTATTTGTTCTTTGGTGATTTTAGCTGT-ATGG-TGTCTCAT----A-TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGCATTTT---TTCTG-AGTTG---C |
| D_pseudoobscura | chr4_group3:8444179-8444302 + | AGT--TGATCT--------------TTTG-TTTGCACATTATTTGATCTTTGGTGATTTTAGCTGT-ATGGTGTATATCAAA--G-ATCCATAGAGCTTTATCACCAAAACCCAAAT-GGTTTTTGCATTTTTTCGCTTG-AGTTG---C |
| D_persimilis | super_1:9895298-9895421 + | AGT--TGATCT--------------TTTG-TTTGCACATTATTTGATCTTTGGTGATTTTAGCTGT-ATGGTGTATATCAAA--G-ATCCATAGAGCTTTATCACCAAAACCCAAAT-GGTTTTTGCATTTTTTCGCTTG-AGTTG---C |
| D_willistoni | scaffold_181132:873333-873452 - | ATT--GATTTT--------------GATT-TTCGCATATTATTTGGTCTTTGGTGATTTTAGCTGT-ATGGTGTATGAGCAT--A-ATCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGCATTTT---GCTTG-AGTTG---- |
| D_virilis | scaffold_12963:12862857-12862965 - | TGT--TGCCTT--------------TTTATTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTGCGCGTAT-----TCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGCATT---------------G---C |
| D_grimshawi | scaffold_14978:831270-831399 + | TGC--TGCCCTTTGTTTGCCCTTTTG-AG-TTTGCATATTATTTGCTCTTTGGTGATTTTAGCTCT-ATGGTGTGCGCATAA-----TCCACAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGCATT-T---GCTTT-C----TTTT |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTAG-----------------------------ACATTCTCCGATCTTTGGTGATT-CAGCTTCAATGATTGGCTACAGGTTTCTTTCATAAAGCTAGGTTACCAAAGCTCGGCGT------------------CTTG-AT---CTAC |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AGA--A------------------------------CATTCTCCGATCTTTGGTGATT-CAGCTTAAATGATAGAATTCAGACGT-CTTCATAAAGCTAGGTTACCAAAGCTCGGCGTTC--------------------CAG---TTCG |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GGA--GGCCCGTTTC-----------------------------TCTCTTTGGTTATC-TAGCTGT-ATGAGTGCCACAGAG--C-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGA--------------------C-T---CTCA |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G----------TTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGTATT-G-G--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC-------------------------------- |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CGG--GGTTGGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGGTGTGGAG--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA--------------------C-----CCCA |
| Rattus_norvegicus_1 | rno-mir-9a-3:1-90 + | GGA--GGCCCGTTTC-----------------------------TCTCTTTGGTTATC-TAGCTGT-ATGAGTGCCACAGAG--C-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGA--------------------C-T---CTAA |
| Rattus_norvegicus_2 | rno-mir-9a-2:1-87 + | GGA--AGCGAGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGTATT-G-G--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC--------------------C-----TTCA |
| Rattus_norvegicus_3 | rno-mir-9a-1:1-89 + | CGG--GGTTGGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGGTGTGGAG--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA--------------------C-----CCCA |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CGG--GGTTGGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGGTGTGGAG--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA--------------------C-----CCCA |
| Macaca_mulatta_2 | mml-mir-9-3:1-90 + | GGA--GGCCCGTTTC-----------------------------TCTCTTTGGTTATC-TAGCTGT-ATGAGTGCCACAGAG--C-CGCTCTCAAGCTAGATAACCGAAAGTAGAAATGA--------------------C-T---CTCA |
| Macaca_mulatta_3 | mml-mir-9-2:1-87 + | GGA--AGCGAGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGTATT-G-G--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC--------------------C-----TTCA |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GGA--AGTGAGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGTATT-G-G--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC--------------------C-----TTCA |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CGG--GGTTGGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGGTGTGGAG--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA--------------------C-----CCCA |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GGA--GGCCCGTTTC-----------------------------TCTCTTTGGTTATC-TAGCTGT-ATGAGTGCCACAGAG--C-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGA--------------------C-T---CTCA |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GGA--AGCGAGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGTATT-G-G--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC--------------------C-----TTCA |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GGA--AGCGAGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGTATT-G-G--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC--------------------C-----TTCA |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CGG--GGTTGGTTGT-----------------------------TATCTTTGGTTATC-TAGCTGT-ATGAGTGGTGTGGAG--T-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA--------------------C-----CCCA |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GGA--GGCCCGTTTC-----------------------------TCTCTTTGGTTATC-TAGCTGT-ATGAGTGCCACAGAG--C-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGA--------------------T-T---CTCA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16697909-16698030 + | CT--TGCA----------------------------CT---ATTTA--------TC------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-CACGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-C---------------------------------------------------A----------TG----ATAT-- |
| D_simulans | zdv96e12.b1:15-131 + | CT--TGCA----------------------------CT---ATTTA--------TC------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-CACGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTA------------------------------------------------------------------------ACA-- |
| D_yakuba | chr2R:4405017-4405183 - | CT--TGCA----------------------------CT---ATTTA--------TC------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-CGCGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CAGCGCACCA--ACCA---------------AAAACAGCCACAAATACAGGAATGATTAAAAATATC---TTT-- |
| D_eugracilis | scf7180000408961:271824-271982 + | CT--TGCA----------------------------CT---ATTTA--------TC------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-CACGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATAGCTTAAGCAACGCACCAGAAACA---------------ACAACAGCCACAAATTCAGGAA----------TGA----TAT-- |
| D_elegans | scf7180000490579:646025-646202 - | CT--CGCA----------------------------CT---ATTTA--------TC------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-CACGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTAA-CAACGCACCAGCAACAAAAAAAAAACAAAAAACAACAGCCACAAAAACTGGAA----------TGAC-TTTAAGT |
| D_ananassae | scaffold_12916:15865465-15865583 - | CA--CGCA----------------------------CTCCCTTTCA--------TT------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-CACGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTA------------------------------------------------------------------------ACA-- |
| D_pseudoobscura | chr4_group3:8443145-8443295 + | CT--CTCCC-ATTCGCTGTCTGTCGACTTCCATGCACT---TTTTGTTCTCCTTTA------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-TTTGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTA------------------------------------------------------------------------ACA-- |
| D_persimilis | super_1:9894267-9894417 + | CT--CTCCC-ATTCGCTGTCTGCCGCCTTCCATGCACT---TTTTGTTCTCCTTTA------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-TTTGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTA------------------------------------------------------------------------ACA-- |
| D_willistoni | scaffold_181061:30518-30658 - | CC--TCCCCTCTTCACCATC---------------------TTTTCCTCTCCCTCCATCATCATTTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-TTTGCACATTGTATAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTG------------------------------------------------------------------------CCA-- |
| D_virilis | scaffold_12963:12863840-12863951 - | CA--CACAC-AA--------------------------T----TT---------TC------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-TT---ACAGTTTGTAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTG------------------------------------------------------------------------CCA-- |
| D_grimshawi | scaffold_14978:830199-830317 + | AT--TGCA----------------------------AT---TTCTT--------TC------A-TTTTTGCTGT-TTCTTTGGTATTCTAGCTGTA--GATTGTTT-CT---ATATCTTGTAT----CATCTAAAGCTTTTATACCAAAGCTCCA--GCTTAAATTGCTTGC----------------------------------------------------------------CACC--GCCT-- |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTAGACA-TT--------------------------C--------------------------------TCCGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGG----T-----TTCTTTCA--TAAAGCTAGGTTACCAAAGCTCGGCGTCTTGAT------------------------------------------------------------------------------CTAC-- |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AG--AACA--TT--------------------------C--------------------------------TCCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGA---------CGT-CTTCA--TAAAGCTAGGTTACCAAAGCTCGGCG-------------------------------------------------------------------------------TTCCAGTTCG-- |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GG--AGGCC-CG--------------------------T--------------------------------TTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA----------GC-CGTCA--TAAAGCTAGATAACCGAAAGTAGAAA-------------------------------------------------------------------------------TGAC-TCTCA-- |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G-------------------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG------------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------C----------- |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CG--GGGTT-GG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA----------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------TAAC--CCCA-- |
| Rattus_norvegicus_1 | rno-mir-9a-3:1-90 + | GG--AGGCC-CG--------------------------T--------------------------------TTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA----------GC-CGTCA--TAAAGCTAGATAACCGAAAGTAGAAA-------------------------------------------------------------------------------TGAC-TCTAA-- |
| Rattus_norvegicus_2 | rno-mir-9a-2:1-87 + | GG--AAGCG-AG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG------------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------CTCC--TTCA-- |
| Rattus_norvegicus_3 | rno-mir-9a-1:1-89 + | CG--GGGTT-GG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA----------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------TAAC--CCCA-- |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CG--GGGTT-GG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA----------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------TAAC--CCCA-- |
| Macaca_mulatta_2 | mml-mir-9-3:1-90 + | GG--AGGCC-CG--------------------------T--------------------------------TTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA----------GC-CGCTC--TCAAGCTAGATAACCGAAAGTAGAAA-------------------------------------------------------------------------------TGAC-TCTCA-- |
| Macaca_mulatta_3 | mml-mir-9-2:1-87 + | GG--AAGCG-AG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG------------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------CTCC--TTCA-- |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GG--AAGTG-AG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG------------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------CTCC--TTCA-- |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CG--GGGTT-GG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA----------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------TAAC--CCCA-- |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GG--AGGCC-CG--------------------------T--------------------------------TTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA----------GC-CGTCA--TAAAGCTAGATAACCGAAAGTAGAAA-------------------------------------------------------------------------------TGAC-TCTCA-- |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GG--AAGCG-AG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG------------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------CTCC--TTCA-- |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GG--AAGCG-AG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTAT-TG------------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------CTCC--TTCA-- |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CG--GGGTT-GG--------------------------T--------------------------------TGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGTG-TGGA----------GT-CTTCA--TAAAGCTAGATAACCGAAAGTAAAAA-------------------------------------------------------------------------------TAAC--CCCA-- |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GG--AGGCC-CG--------------------------T--------------------------------TTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCCA-CAGA----------GC-CGTCA--TAAAGCTAGATAACCGAAAGTAGAAA-------------------------------------------------------------------------------TGAT-TCTCA-- |