| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:642193-642303 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_simulans | chr3L:290535-290645 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_yakuba | chr3L:629639-629749 + | TTTGTAA-------------------------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_eugracilis | scf7180000409184:669315-669425 + | CTTGTAA-------------------------CTTCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATGCCACA--------------------------------------T--------TCC |
| D_elegans | scf7180000491249:790166-790276 + | TTTGTTA-------------------------CTTCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_ananassae | scaffold_13337:6520579-6520690 - | TTTGTAA--------------A----------CTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_pseudoobscura | chrXR_group8:4603895-4604015 - | TTTGGGAC-------T-----ACTCCACCAATA---TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_persimilis | super_29:844606-844726 - | TTTGGGAC-------T-----ACTCCACCAATA---TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTTAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_willistoni | scaffold_180698:10172097-10172254 + | TTTTTTTCATACATTT----------------TTTTGATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTT--------GCC |
| D_virilis | scaffold_13049:5805300-5805416 + | TTTGTGTG-------T-----CGTCT----ATC---TCTGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTATTTCAT-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| D_grimshawi | scaffold_15110:13265206-13265333 - | TGTGCGTC-------TCTCTGTCTCCATCACTA-CCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGA-------CTGTTTTTCAG-----ACAA------GTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACA--------------------------------------T--------TCC |
| Caenorhabditis_elegans_1 | cel-mir-81:1-108 + | ATCAGTGC-------------------------CATCGTG-----C-CCAACAGTCGGTTTTCACCGTGATCTGA-------GAGCAATCCAA-----AAATGCTTTTCTGAGATCATCGTGAAAGCTAGTTGTT---------GGTC----------------------------------------TACGGGCTTTTG |
| Caenorhabditis_elegans_2 | cel-mir-82:1-97 + | GAAATAG----------------------------------GTTCTTTTAGCAACCGGTTTTCTCTGTGATCTACAGAATGACAGCTAAT---------CGT------CTGAGATCATCGTGAAAGCCAGTTGTTTTTATGAACTC------------------------------------------------------ |
| Caenorhabditis_briggsae_2 | cbr-mir-81:1-90 + | CGTGAT------------------------------------------TAACGGTCGGTTTTCACCTTGATCTGA-------GAGCAATA----ACCAGAATGCTTATCTGAGATCATCGTGAAAGCTAGTTGTT---------ACTT----------------------------------------C--------ACT |
| Caenorhabditis_briggsae_1 | cbr-mir-82:1-95 + | AAGTT---------------------------------------CTTCTAGCGACAGGTTTTCGCCGTGATCTGC-------A-GAGTTCCATGAA--GAAA--ACATCTGAGATCATCGTGAAAGCCAGTTGCTTAAGAGGACTC------------------------------------------------------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18472019-18472126 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTACA-------------CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCATTT |
| D_simulans | chr2L:18160930-18161037 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTACA-------------CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCATTT |
| D_yakuba | chr2R:4988819-4988926 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTACA-------------CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCATTT |
| D_eugracilis | scf7180000409447:414649-414756 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------------------C-TACAAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAG-----CCGCAATT |
| D_elegans | scf7180000491338:2439478-2439585 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------------------C-TACTAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAG-----CCGCAATT |
| D_ananassae | scaffold_12916:2379166-2379273 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-CAA---------------------C-TAAGAATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAG-----CCGCATTT |
| D_pseudoobscura | chr4_group3:3635640-3635746 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAC-----------------------TTCAGATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAG-----CCTCATTT |
| D_persimilis | super_1:5116219-5116325 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAC-----------------------TTCAGATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAG-----CCTCATTT |
| D_willistoni | scaffold_180708:11623134-11623240 + | AAAGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAA---------TTAT--------T-CA---ATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAG-----CCAC---A |
| D_virilis | scaffold_12963:18451337-18451441 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAT---------------------T-TATAGAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAG-----CCGC---A |
| D_grimshawi | scaffold_3792:132-239 + | A-AGGACCTTTTTCTCTCTGG----CAAATTGAGGTAGTAGGTTGTATAGTAG-TAT---------------------C-TATCTAGCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAG-----CAGCATAG |
| Caenorhabditis_elegans | cel-let-7:1-99 + | T-ACAC----------TGTGGAT---CCGGTGAGGTAGTAGGTTGTATAGTTT-GG-AA-------TATTAC---CA----CC--GGTGAACTATGCAATTTTCTACCTTACCGGAGACAGA---ACT-----CTTC--GA |
| Caenorhabditis_briggsae | cbr-let-7:1-87 + | A-CTGG-------------GG----TACGGTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TATTAC---TC----TCG--GTGAACTATGCAAGTTTCTACCTCACCGAATACC-----AG-------------G |
| Mus_musculus_11 | mmu-let-7f-1:1-89 + | A-T----------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG------------------------ |
| Mus_musculus_10 | mmu-let-7g:1-88 + | C-C-----------------------AGGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCAGG------------------------- |
| Mus_musculus_1 | mmu-let-7b:1-85 + | G------------------------CAGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCCGAAGATAACTATACAACCTACTGCCTTCCCTGA------------------------- |
| Mus_musculus_3 | mmu-let-7a-1:1-94 + | T-T----------CACTG-------TGGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGA-------------------T |
| Mus_musculus_2 | mmu-let-7i:1-85 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG-------------------------- |
| Mus_musculus_5 | mmu-let-7c-1:1-94 + | T-GTGTGC-------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCAC---AC-------------T |
| Mus_musculus_4 | mmu-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Mus_musculus_7 | mmu-let-7d:1-103 + | A-ATGGGT-------------TCCT-AGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGAGATTTT---GCCC-A-CAAGGAGTTAACTATACGACCTGCTGCCTTTCTTAGGGCCTT---AT-------------T |
| Mus_musculus_6 | mmu-let-7a-2:1-96 + | C-TGCATGT------------TCCC-AGGTTGAGGTAGTAGGTTGTATAGTTT-AG-AG-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTT--GCA-------------C |
| Mus_musculus_9 | mmu-let-7e:1-93 + | C-GCGCC--------------CCCC-GGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------AGACAC------C-CGAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGC---GC-------------C |
| Mus_musculus_8 | mmu-let-7c-2:1-95 + | A-CGGC---------------CTTT-GGGGTGAGGTAGTAGGTTGTATGGTTT-TG-GG-------CTCTGC---CCCGC-TCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC---CG-------------C |
| Rattus_norvegicus_10 | rno-let-7c-2:1-95 + | A-CGGC---------------CTTT-GGGGTGAGGTAGTAGGTTGTATGGTTT-TG-GG-------CTCTGC---CCCGC-TCTGCGGTAACTATACAATCTACTGTCTTTCCTGAAGTGGC---CG-------------C |
| Rattus_norvegicus_1 | rno-let-7e:1-93 + | C-GCGCC--------------CCCC-GGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------AGACAC------C-CGAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGC---GC-------------C |
| Rattus_norvegicus_4 | rno-let-7b:1-85 + | G------------------------CGGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTC---GCCC-C-TCCGAAGATAACTATACAACCTACTGCCTTCCCTGA------------------------- |
| Rattus_norvegicus_5 | rno-let-7a-2:1-96 + | C-GGCATG---------C---TCCC-AGGCTGAGGTAGTAGGTTGTATAGTTT-AG-AG-------TTACAA------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCTTGGGACTT--GCA-------------C |
| Rattus_norvegicus_2 | rno-let-7d:1-98 + | T-GGGC---------------TCCT-AGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGAGATTTT---GCCC-A-CAAGGAGTTAACTATACGACCTGCTGCCTTTCTTAGGGCC------T-------------T |
| Rattus_norvegicus_3 | rno-let-7i:1-85 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG-------------------------- |
| Rattus_norvegicus_8 | rno-let-7f-1:1-89 + | A-T----------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTTAGGAGATAACTATACAATCTATTGCCTTCCCTGAG------------------------ |
| Rattus_norvegicus_9 | rno-let-7a-1:1-94 + | T-T----------CACTG-------TGGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTAAGGTGA-------------------T |
| Rattus_norvegicus_6 | rno-let-7c-1:1-94 + | T-GTGTGC-------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCAC---AC-------------T |
| Rattus_norvegicus_7 | rno-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Macaca_mulatta_1 | mml-let-7g:1-84 + | A--------------------------GGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA--------------------------- |
| Macaca_mulatta_2 | mml-let-7d:1-87 + | C-C----------------------TAGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGGGATTTT---GCCC-A-CAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG------------------------ |
| Macaca_mulatta_3 | mml-let-7b:1-83 + | C-------------------------GGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCAGAAGATAACTATACAACCTACTGCCTTCCCTG-------------------------- |
| Macaca_mulatta_4 | mml-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Macaca_mulatta_5 | mml-let-7a-2:1-72 + | A--------------------------GGCTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCT--------------------------- |
| Macaca_mulatta_6 | mml-let-7e:1-79 + | C-C----------------------CGGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG----------------------- |
| Macaca_mulatta_7 | mml-let-7a-1:1-80 + | T-------------------------GGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTA-------------------------- |
| Macaca_mulatta_8 | mml-let-7c:1-84 + | G-C------------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAG---------------------C |
| Macaca_mulatta_9 | mml-let-7i:1-85 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAG-------------------------- |
| Macaca_mulatta_10 | mml-let-7f-1:1-87 + | T------------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA------------------------- |
| Macaca_mulatta_11 | mml-let-7a-3:1-74 + | ---------------------------GGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCT--------------------------- |
| Pongo_pygmaeus_10 | ppy-let-7i:1-84 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTA--------------------------- |
| Pongo_pygmaeus_11 | ppy-let-7g:1-84 + | A--------------------------GGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA--------------------------- |
| Pongo_pygmaeus_4 | ppy-let-7f-1:1-87 + | T------------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA------------------------- |
| Pongo_pygmaeus_5 | ppy-let-7e:1-79 + | C-C----------------------CGGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG----------------------- |
| Pongo_pygmaeus_2 | ppy-let-7b:1-83 + | C-------------------------GGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCAGAAGATAACTATACAACCTACTGCCTTCCCTG-------------------------- |
| Pongo_pygmaeus_3 | ppy-let-7d:1-87 + | C-C----------------------TAGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGGGATTTT---GCCC-A-CAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG------------------------ |
| Pongo_pygmaeus_1 | ppy-let-7a-3:1-74 + | ---------------------------GGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCT--------------------------- |
| Pongo_pygmaeus_9 | ppy-let-7a-1:1-80 + | T-------------------------GGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTA-------------------------- |
| Pongo_pygmaeus_8 | ppy-let-7c:1-84 + | G-C------------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAG---------------------C |
| Pongo_pygmaeus_7 | ppy-let-7a-2:1-72 + | A--------------------------GGTTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCT--------------------------- |
| Pongo_pygmaeus_6 | ppy-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Gorilla_gorilla_2 | ggo-let-7f:1-110 + | A-AAAC-ATTGC----TCTAT----CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGAGGAGTA---GA-------------C |
| Gorilla_gorilla_3 | ggo-let-7e:1-109 + | A-C----CTGCCGCGCC----CCCC-GGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGGCTGC---GCCCTGCACG---GGA |
| Gorilla_gorilla_4 | ggo-let-7b:1-109 + | C-AAGGCCGGG-----CCTGG----CGGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCAGAAGATAACTATACAACCTACTGCCTTCCCTGAGGAGCC--CAG-------------T |
| Gorilla_gorilla_5 | ggo-let-7a:1-109 + | A-G--ACCGACTGCCCT------TT-GGGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCTGAAGTGGCTGTAA---------TATCT |
| Gorilla_gorilla_6 | ggo-let-7i:1-108 + | C-CCGACACCATG--------GCCC-TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAGTG-CT-G---GT-------------G |
| Gorilla_gorilla_7 | ggo-let-7g:1-111 + | C-C-----TTTTGCCTGA---TTCC-AGGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCAGGAACAGC---GC-------------G |
| Gorilla_gorilla_1 | ggo-let-7c:1-108 + | G-AAGC--TGTGTGC------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAGCAC---AC-TTGAGCC---ATC |
| Homo_sapiens_1 | hsa-let-7d:1-87 + | C-C----------------------TAGGAAGAGGTAGTAGGTTGCATAGTTT-TA-GGGCAGGGATTTT---GCCC-A-CAAGGAGGTAACTATACGACCTGCTGCCTTTCTTAGG------------------------ |
| Homo_sapiens_9 | hsa-let-7g:1-84 + | A--------------------------GGCTGAGGTAGTAGTTTGTACAGTTT-GAGGGTCTATGATACC---ACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCCA--------------------------- |
| Homo_sapiens_8 | hsa-let-7f-2:1-83 + | T-G----------------------TGGGATGAGGTAGTAGATTGTATAGTTT-TAGGG-------TCATAC---CCCATCTTGGAGATAACTATACAGTCTACTGTCTTTCCCACG------------------------ |
| Homo_sapiens_7 | hsa-let-7a-1:1-80 + | T-------------------------GGGATGAGGTAGTAGGTTGTATAGTTT-TAGGG-------TCACACCCACC-A-CTGGGAGATAACTATACAATCTACTGTCTTTCCTA-------------------------- |
| Homo_sapiens_6 | hsa-let-7a-3:1-74 + | ---------------------------GGGTGAGGTAGTAGGTTGTATAGTTT-GG-GG-------CTCTGC---CCTGC-TATGGGATAACTATACAATCTACTGTCTTTCCT--------------------------- |
| Homo_sapiens_5 | hsa-let-7b:1-83 + | C-------------------------GGGGTGAGGTAGTAGGTTGTGTGGTTT-CA-GGGCAGTGATGTT---GCCC-C-TCGGAAGATAACTATACAACCTACTGCCTTCCCTG-------------------------- |
| Homo_sapiens_4 | hsa-let-7i:1-84 + | C-------------------------TGGCTGAGGTAGTAGTTTGTGCTGTTGGTC-GGGTTGTGACATT---GCCC-GCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTA--------------------------- |
| Homo_sapiens_3 | hsa-let-7e:1-79 + | C-C----------------------CGGGCTGAGGTAGGAGGTTGTATAGTTG-AG-GA-------GGACAC------C-CAAGGAGATCACTATACGGCCTCCTAGCTTTCCCCAGG----------------------- |
| Homo_sapiens_2 | hsa-let-7a-2:1-72 + | A--------------------------GGTTGAGGTAGTAGGTTGTATAGTTT-AG-AA-------TTACAT------C-AAGGGAGATAACTGTACAGCCTCCTAGCTTTCCT--------------------------- |
| Homo_sapiens_11 | hsa-let-7f-1:1-87 + | T------------------------CAGAGTGAGGTAGTAGATTGTATAGTTG-TG-GGGTAGTGATTTT---ACCCTGTTCAGGAGATAACTATACAATCTATTGCCTTCCCTGA------------------------- |
| Homo_sapiens_10 | hsa-let-7c:1-84 + | G-C------------------ATCC-GGGTTGAGGTAGTAGGTTGTATGGTTT-AG-AG-------TTACAC------C-CTGGGAGTTAACTGTACAACCTTCTAGCTTTCCTTGGAG---------------------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:20487426-20487546 + | AAAGACCATCCC---------ATATT--------------------CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAG-TTATATT-CAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAGACATCGGAGT----T---GAA------A |
| D_simulans | chr2L:20052694-20052814 + | AAAGACCATCCC---------ATCTT--------------------CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAG-TTATACT-CAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAGACATCGGAGT----T---GAA------A |
| D_yakuba | chr2R:6842709-6842830 + | AAAGAACATCCC---------ACCAT--------------------CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATACT-CAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAGTCATCGGAGT----T---GAA------A |
| D_eugracilis | scf7180000409767:814641-814757 - | AAAGAACTT--------------TAT--------------------CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATAGA-AAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACATCGAAGT----T---GAA------A |
| D_elegans | scf7180000491186:467220-467343 + | AAATAACAT--------------AAT--------------------CAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATATT-CAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCCTGACATCGAAGTAGAGTGAAAAC------A |
| D_ananassae | scaffold_12916:6985813-6985928 + | AAATATCAA-------------------GA----------------GAGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATAATAT-CAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACTTCAAGTT----T---AAA------T |
| D_pseudoobscura | chr4_group3:7845311-7845422 - | GGAAAT--------------------CAGA----------------AGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATAACAT-AAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACAGCG---T----C---TAC------A |
| D_persimilis | super_1:9292009-9292126 - | AAAGACGG---------------AATCAGA----------------AGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATAACAT-AAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCAAGACATCGCC------T---ACA------G |
| D_willistoni | scaffold_180708:1845911-1846049 + | ATAGATGGTAGATATATATGTAGC--TACT----------------TGGCCTCTTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATTAAATAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGTCCGACATCATC------T---ACAATATAAT |
| D_virilis | scaffold_12963:13613413-13613527 - | TGTGCT--------------------TACT----------------TGGCCT-TTGAGAGTTCCATGCTTCCTTACATTCA-ATAGTATTCAAA-TAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAAACATCACAAA----A---ACA------A |
| D_grimshawi | scaffold_15126:6250403-6250508 + | ATTGTT--------------------TACT----------------TGGCCT-TTGAGAGTTCCATGCTTCCTTGCATTCA-ATAGTATATAAA-TAAGCATATG-GAATGTAAAGAAGTATGGA--GCGAA-AT----CTGGCGAAACATC----------------------- |
| Caenorhabditis_elegans | cel-mir-1:1-96 + | AAAGT------------------------------------------GACCG-TACCGAGCTGCATACTTCCTTACATGCCCATACTATATCATAAATGGATATG-GAATGTAAAGAAGTATGTA--GAACGG-GGTGG----TA----------------------G------T |
| Caenorhabditis_briggsae | cbr-mir-1:1-94 + | TG-----------------------------------------------CTGT-GCCGAGCTGCATACTTCCTTACATGCCCATACTGTACTGTGAATGGATATG-GAATGTAAAGAAGTATGTAGAACGGA-AT----CTAACGGC---------------------------G |
| Mus_musculus_1 | mmu-mir-1a-1:1-77 + | GC-----------------------------------------------------TTGGGACACATACTTCTTTATATGCCCATAT-GAACCTG-CTAAGCTATG-GAATGTAAAGAAGTATGTA--TTTCAG-GC--------------------------------------- |
| Mus_musculus_3 | mmu-mir-1a-2:1-72 + | TC-------------------------------------------------------AGAGCACATACTTCTTTATGTACCCATAT-GAACATT-CAGTGCTATG-GAATGTAAAGAAGTATGTA--TTTTG------------------------------------------- |
| Mus_musculus_2 | mmu-mir-206:1-73 + | CC-------------------------------------------------------AGGCCACATGCTTCTTTATATCCTCATAG-ATATC-T-CAGCACTATG-GAATGTAAGGAAGTGTGTG--GTTTTG-G---------------------------------------- |
| Mus_musculus_4 | mmu-mir-1b:1-122 + | TTCCTT--------------------TAGCTTCTTCTTGGCGGACATTACCTA-CCCAAAATACATACTTCTTTACATTCC-ATAGCACTG-AA-TGTTCATATGGGTACATAAAGAAGTATGTG--CTCTGA-GTAGG----CACTCCTG----------------C------G |
| Rattus_norvegicus_1 | rno-mir-206:1-84 + | C-------------------------------------------------TTC-CCCAGGCCACATGCTTCTTTATATCCTCATAG-ATATC-A-CTGCGCTATG-GAATGTAAGGAAGTGTGTG--GTTTTG-GCAAG----TG------------------------------ |
| Rattus_norvegicus_2 | rno-mir-3571:1-111 + | TTGGCG--------------------GACA----------------TTACCTA-CCCAAAATACACACTTCTTTACATTCC-ATAGCATTC-TA-TGTTCATATGGGTACATAAAGAAGTATGTG--CTCTGA-GTAGG----CA-----CTATTGT----G-CCG-A------T |
| Rattus_norvegicus_3 | rno-mir-1:1-87 + | TG-----------------------------------------------CCTA-CTCAGAGCACATACTTCTTTATGTACCCATAT-GAACATA-GAATGCTATG-GAATGTAAAGAAGTGTGTA--TTTTGG-GTAGG----TA------------------------------ |
| Macaca_mulatta_1 | mml-mir-206:1-86 + | TG-----------------------------------------------CTTC-CCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATG-GAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TG------------------------------ |
| Macaca_mulatta_2 | mml-mir-1-2:1-72 + | C--------------------------------------------------------AGAGTACATACTTCTTTATGTACCCATAT-GAACATA-CAAGGCTATG-GAATGTAAAGAAGTATGTA--TTTTGG------------------------------------------ |
| Macaca_mulatta_3 | mml-mir-1-1:1-77 + | GC-----------------------------------------------------TTGGGAAACATACTTCTTTATATGCCCATAT-GGACCTG-CTAAGCTATG-GAATGTAAAGAAGTATGTA--TCTCAG-GC--------------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-1-1:1-71 + | TG--------------------------------------------------------GGAAACATACTTCTTTATATGCCCATAT-GGACCTG-CTAAGCTATG-GAATGTAAAGAAGTATGTA--TCTCA------------------------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-206:1-86 + | TG-----------------------------------------------CTTC-CCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATG-GAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TG------------------------------ |
| Gorilla_gorilla_2 | ggo-mir-1:1-111 + | AGCTAACAACTT---------AGTAA--------------------T-ACCTA-CTCAGAGTACATACTTCTTTATGTACCCATAT-GAACATA-CAATGCTATG-GAATGTAAAGAAGTATGTA--TTTTTG-GTAGG----CAATAAAC-----------------------C |
| Gorilla_gorilla_1 | ggo-mir-206:1-112 + | GCTGCTTCTGGA---------TG----ACA----------------CTGCTTC-CCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATG-GAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TGCCTCCTC----------------------G |
| Homo_sapiens_1 | hsa-mir-206:1-86 + | TG-----------------------------------------------CTTC-CCGAGGCCACATGCTTCTTTATATCCCCATAT-GGAT-TA-CTTTGCTATG-GAATGTAAGGAAGTGTGTG--GTTTCG-GCAAG----TG------------------------------ |
| Homo_sapiens_3 | hsa-mir-1-1:1-71 + | TG--------------------------------------------------------GGAAACATACTTCTTTATATGCCCATAT-GGACCTG-CTAAGCTATG-GAATGTAAAGAAGTATGTA--TCTCA------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-1-2:1-85 + | ACCTAC-------------------------------------------------TCAGAGTACATACTTCTTTATGTACCCATAT-GAACATA-CAATGCTATG-GAATGTAAAGAAGTATGTA--TTTTTG-GTAGG----C------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:2635213-2635319 - | CCT-C------A-TCAGTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TATA-CTAGC-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATC--------------GA----- |
| D_simulans | chr3R:2666345-2666451 - | CCT-C------A-TCAGTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TATA-CTAGC-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATC--------------GA----- |
| D_yakuba | chr3R:7777990-7778096 + | CCT-C------A-TCACTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TATA-CTAGT-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATC--------------GG----- |
| D_eugracilis | scf7180000409886:257332-257438 + | CTC-C------T-TCAGTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TACT-CTAGC-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATC--------------GA----- |
| D_elegans | scf7180000491278:1424384-1424490 - | CCC-C------T-TCAGTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TACA-TTAGC-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGC--------------GA----- |
| D_ananassae | scaffold_13340:5417353-5417464 + | CCT-AT-------CCAGTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TATA-CTAGT-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATC--------------GTAAAAT |
| D_pseudoobscura | chr2:19739488-19739592 + | TCT-C------A---AGTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TACA-TTAGC-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAAC--------------GA----- |
| D_persimilis | super_3:2487675-2487785 + | TTT-GG--TTCT-CAAGTTTGCTCCACGTCTACCCTGTAGATCCG--AATTTGTTT--TACA-TTAGC-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAAC--------------GA----- |
| D_willistoni | scaffold_181089:12007310-12007419 - | TTT-G----------------TTCTACGTCTACCCTGTAGATCCG--AATTTGTTT--TATA-CTAGT---T-TT-TAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAACAAACC----AAA----- |
| D_virilis | scaffold_13047:6092057-6092155 + | TTT-GT----------------TCCACGTCCACCCTGTAGATCCG--AATTTGTTG--TACA-CTAGT-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGC--------------GA----- |
| D_grimshawi | scaffold_14906:11443552-11443654 + | TTC-AC-----------TTTGTTCCACGTCTACCCTGTAGATCCG--AATTTGTTG--TACA-CTAGC-----T-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACC--------------GA----- |
| Mus_musculus_1 | mmu-mir-125a:1-68 + | CTG-G--------------------------GTCCCTGAGACCCTTTAACCTGTGA--GGAC-GTC-------CA-GGGTCACAGGTGAGGTTCTTGGGAGCCTGG--------------------------------------- |
| Mus_musculus_3 | mmu-mir-99b:1-70 + | GGC------------------------ACC-CACCCGTAGAACCG--ACCTTGCGG--GGCC-TTCGC--------CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------- |
| Mus_musculus_2 | mmu-mir-10b:1-68 + | TAT-A-------------------------TACCCTGTAGAACCG--AATTTGTGT--GGTACCCA-------CA-TAGTCACAGATTCGATTCTAGGGGAATATA--------------------------------------- |
| Mus_musculus_5 | mmu-mir-125b-2:1-71 + | GCC-------------------------TA-GTCCCTGAGACCCT--AACTTGTGA--GGTA-TTT---TAG-TA-ACATCACAAGTCAGGTTCTTGGGACCTAGGC-------------------------------------- |
| Mus_musculus_4 | mmu-mir-99a:1-65 + | CA--------------------------TA-AACCCGTAGATCCG--ATCTTGTGG--TGAA-GTGGA---------CCGCGCAAGCTCGTTTCTATGGGTCTGTG--------------------------------------- |
| Mus_musculus_7 | mmu-mir-125b-1:1-77 + | TGC-G------CT----------CCCCTCA-GTCCCTGAGACCCT--AACTTGTGA--TGTT-T---ACCGTTT-AAATCCACGGGTTAGGCTCTTGGGAGCTG----------------------------------------- |
| Mus_musculus_6 | mmu-mir-100:1-80 + | CCT-GT-----------------TGCCACA-AACCCGTAGATCCG--AACTTGTGC--TGAT-----------T-CTGCACACAAGCTTGTGTCTATAGGTATGTGTCTGTTA------------------------------GG |
| Mus_musculus_8 | mmu-mir-10a:1-110 + | GAC-C------TGTC--TGTCTTCTGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAA-TTT-------TG-TGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGA---C-------ATAAACACTCCGCTCA----- |
| Rattus_norvegicus_1 | rno-mir-99a:1-81 + | CCC-AT-----------------TGGCATA-AACCCGTAGATCCG--ATCTTGTGG--TGAA-GTGGA---------CCGCACAAGCTCGTTTCTATGGGTCTGTGGCAGT-G------------------------------TG |
| Rattus_norvegicus_4 | rno-mir-100:1-80 + | CCT-GT-----------------TGCCACA-AACCCGTAGATCCG--AACTTGTGC--TGAC-----------CA-TGCACACAAGCTTGTGTCTATAGGTATGTGTCTGTTA------------------------------GG |
| Rattus_norvegicus_5 | rno-mir-99b:1-70 + | GGC------------------------ACC-CACCCGTAGAACCG--ACCTTGCGG--GGCC-TTCGC--------CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------- |
| Rattus_norvegicus_2 | rno-mir-10b:1-109 + | CCA-AA--G-TTGTAAC-GTTGTCTATATATACCCTGTAGAACCG--AATTTGTGT--GGTACCCA-------CA-TAGTCACAGATTCGATTCTAGGGGAATATATGGTCGA---T-------GCAAAAACT----TCA----- |
| Rattus_norvegicus_3 | rno-mir-125a:1-85 + | TGC-C------GG----------CCTCTGG-GTCCCTGAGACCCTTTAACCTGTGA--GGAC-GTC-------CA-GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGCCTG-------------------------------GC |
| Rattus_norvegicus_8 | rno-mir-125b-2:1-88 + | ACC-AG--A--CT----------TTTCCTA-GTCCCTGAGACCCT--AACTTGTGA--GGTA-TTT---TAG-TA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAG-A------------------------------GG |
| Rattus_norvegicus_9 | rno-mir-125b-1:1-87 + | TGC-G------CT----------CCCCTCA-GTCCCTGAGACCCT--AACTTGTGA--TGTT-T---ACCGTTT-AAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTG-------------------------------C |
| Rattus_norvegicus_6 | rno-mir-10a:1-110 + | GAC-C------TGTC--TGTCTTCTGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAA-TTT-------TG-TGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGA---C-------ATAAACACTCCGCTCA----- |
| Rattus_norvegicus_7 | rno-mir-3588:1-106 + | CTG-C------TGGT--ACCTCTCCGCCTA-GGTCCCAAGAGCCT--GACTTGTGA--TGTT-ACT---AAA-A-TACCTCACAAGTTAGGGTCTCAGGGACTAGGAAAAGTCTGGTTTGATGC-------------------AG |
| Macaca_mulatta_1 | mml-mir-125b-2:1-89 + | ACC-AG--A--CT----------TTTCCTA-GTCCCTGAGACCCT--AACTTGTGA--GGTA-TTT---TAG-TA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGG------------------------------GA |
| Macaca_mulatta_2 | mml-mir-100:1-80 + | CCT-GT-----------------TGCCACA-AACCCGTAGATCCG--AACTTGTGG--TAT---TAGT---------CCGCACAAGCTTGTGTCTATAGGTATGTGTCTTTTA------------------------------GG |
| Macaca_mulatta_3 | mml-mir-99b:1-70 + | GGC------------------------ACC-CACCCGTAGAACCG--ACCTTGCGG--GGCC-TTCGC--------CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------- |
| Macaca_mulatta_4 | mml-mir-99a:1-81 + | CCC-AT-----------------TGGCATA-AACCCGTAGATCCG--ATCTTGTGG--TGAA-GTGGA---------CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGT-G------------------------------TG |
| Macaca_mulatta_5 | mml-mir-125b-1:1-88 + | TGC-G------CT----------CCTCTCA-GTCCCTGAGACCCT--AACTTGTGA--TGTT-T---ACCGTTT-AAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTG------------------------------CT |
| Macaca_mulatta_6 | mml-mir-10b:1-110 + | CCA-GA--GGTTGTAAC-GTTGTCTATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCA-------TA-TAGTCACAGATTCGATTCTAGGGGAATATATGGTCGA---T-------GCAAAAACT----TCA----- |
| Macaca_mulatta_7 | mml-mir-10a:1-109 + | GAT-C------TGTC--TGTCTTCTGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAA-TTT-------TG-TGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGA---C-------ATAAACACTCCGC-TC----- |
| Macaca_mulatta_8 | mml-mir-125a:1-86 + | TGC-C------AG----------TCTCTGG-GTCCCTGAGACCCTTTAACCTGTGA--GGAC-ATC-------CA-GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGTCTGG------------------------------CC |
| Pongo_pygmaeus_4 | ppy-mir-100:1-80 + | CCT-GT-----------------TGCCACA-AACCCGTAGATCCG--AACTTGTGG--TAT---TAGT---------CCGCACAAGCTTGTATCTATAGGTATGTGTCTGTTA------------------------------GG |
| Pongo_pygmaeus_5 | ppy-mir-10b:1-110 + | CCA-GA--GGTTGTAAC-GTTGTCTATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCA-------TA-TAGTCACAGATTCGATTCTAGGGGAATATATGGTCGA---T-------GCAAAAACT----TCA----- |
| Pongo_pygmaeus_2 | ppy-mir-125b-1:1-88 + | TGC-G------CT----------CCTCTCA-GTCCCTGAGACCCT--AACTTGTGA--TGTT-T---ACCGTTT-AAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTG------------------------------CT |
| Pongo_pygmaeus_3 | ppy-mir-10a:1-110 + | GAT-C------TGTC--TGTCTTCTGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAA-TTT-------TG-TGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGA---C-------ATAAACACTCCGCTCG----- |
| Pongo_pygmaeus_1 | ppy-mir-125a:1-86 + | TGC-C------AG----------TCTCTAG-GTCCCTGAGACCCTTTAACCTGTGA--GGAC-ATC-------CA-GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGTCTGG------------------------------CC |
| Pongo_pygmaeus_7 | ppy-mir-125b-2:1-89 + | ACC-AG--A--CT----------TTTCCTA-GTCCCTGAGACCCT--AACTTGTGA--GGTA-TTT---TAG-TA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGG------------------------------GA |
| Pongo_pygmaeus_6 | ppy-mir-99a:1-81 + | CCC-AT-----------------TGGCATA-AACCCGTAGATCCG--ATCTTGTGG--TAAA-GTGGA---------CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGT-G------------------------------TG |
| Gorilla_gorilla_2 | ggo-mir-125b-2:1-89 + | ACC-AG--A--CT----------TTTCCTA-GTCCCTGAGACCCT--AACTTGTGA--GGTA-TTT---TAG-TA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGG------------------------------GA |
| Gorilla_gorilla_3 | ggo-mir-125a:1-108 + | CCATGTTGC-CAG----------TCTCTAG-GTCCCTGAGACCCTTTAACCTGTGA--GGAC-ATC-------CA-GGGTCACAGGTGAGGTTCTTGGGAGCCTGGTGTCTGG---C-------CCAACCACACACCTG----GG |
| Gorilla_gorilla_4 | ggo-mir-10b:1-110 + | CCA-GA--CATTGTAAC-GTTGTCTATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCA-------TA-TAGTCACAGATTCGATTCTAGGGGAATATATGGTCGA---T-------GCAAAAACT----TCA----- |
| Gorilla_gorilla_5 | ggo-mir-125b-1:1-88 + | TGC-G------CT----------CCTCTCA-GTCCCTGAGACCCT--AACTTGTGA--TGTT-T---ACCGTTT-AAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTG------------------------------CT |
| Gorilla_gorilla_6 | ggo-mir-100:1-80 + | CCT-GT-----------------TGCCACA-AACCCGTAGATCCG--AACTTGTGG--TAT---TAGT---------CCGCACAAGCTTGTATCTATAGGTATGTGTCTGTTA------------------------------GG |
| Gorilla_gorilla_7 | ggo-mir-10a:1-110 + | GAT-C------TGTC--TGTCTTCTGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAA-TTT-------TG-TGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGA---C-------ATAAACACTCCGCTCT----- |
| Gorilla_gorilla_1 | ggo-mir-99a:1-81 + | CCC-AT-----------------TGGCATA-AACCCGTAGATCCG--ATCTTGTGG--TGAA-GTGGA---------CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGT-G------------------------------TG |
| Homo_sapiens_1 | hsa-mir-125b-2:1-89 + | ACC-AG--A--CT----------TTTCCTA-GTCCCTGAGACCCT--AACTTGTGA--GGTA-TTT---TAG-TA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGG------------------------------GA |
| Homo_sapiens_8 | hsa-mir-99a:1-81 + | CCC-AT-----------------TGGCATA-AACCCGTAGATCCG--ATCTTGTGG--TGAA-GTGGA---------CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGT-G------------------------------TG |
| Homo_sapiens_7 | hsa-mir-10a:1-110 + | GAT-C------TGTC--TGTCTTCTGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAA-TTT-------TG-TGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGA---C-------ATAAACACTCCGCTCT----- |
| Homo_sapiens_6 | hsa-mir-10b:1-110 + | CCA-GA--GGTTGTAAC-GTTGTCTATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCG-------TA-TAGTCACAGATTCGATTCTAGGGGAATATATGGTCGA---T-------GCAAAAACT----TCA----- |
| Homo_sapiens_5 | hsa-mir-99b:1-70 + | GGC------------------------ACC-CACCCGTAGAACCG--ACCTTGCGG--GGCC-TTCGC--------CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC------------------------------------- |
| Homo_sapiens_4 | hsa-mir-125a:1-86 + | TGC-C------AG----------TCTCTAG-GTCCCTGAGACCCTTTAACCTGTGA--GGAC-ATC-------CA-GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCGTCTGG------------------------------CC |
| Homo_sapiens_3 | hsa-mir-125b-1:1-88 + | TGC-G------CT----------CCTCTCA-GTCCCTGAGACCCT--AACTTGTGA--TGTT-T---ACCGTTT-AAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGTG------------------------------CT |
| Homo_sapiens_2 | hsa-mir-100:1-80 + | CCT-GT-----------------TGCCACA-AACCCGTAGATCCG--AACTTGTGG--TAT---TAGT---------CCGCACAAGCTTGTATCTATAGGTATGTGTCTGTTA------------------------------GG |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18471419-18471548 + | A------TAC--TT---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATG----------------ACA |
| D_simulans | chr2L:18160327-18160456 + | A------TAC--TT---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATG----------------ACA |
| D_yakuba | chr2R:4988205-4988334 + | A------TAC--TT---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATG----------------ACA |
| D_eugracilis | scf7180000409447:413958-414087 + | A------TAC--TT---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTT-TTGGC-AACAAAATGG--------------------AATG----------------ACA |
| D_elegans | scf7180000491338:2438776-2438906 + | A------TAC--TT---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATCA--------------------AATG----------------ACA |
| D_ananassae | scaffold_12916:2378756-2378885 + | A------TAC--TC---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTTTAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATC---------------------AATC----------------GAA |
| D_pseudoobscura | chr4_group3:3634738-3634867 + | A------TAC--TT---AT-ATATGGACCATTAACAGAA-ACCCGTAATTCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATT---------------------TATC----------------ACA |
| D_persimilis | super_1:5115309-5115438 + | A------TAC--TT---AT-ATATGGACCATTAACAGAA-ACCCGTAATTCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAATT---------------------TATC----------------ACA |
| D_willistoni | scaffold_180708:11622810-11622939 + | A------TAG--TC---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGCCAACAAAATCG--------------------AA------------------TCG |
| D_virilis | scaffold_12963:18449830-18449980 + | A------TAC--TC---AA-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTATAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAAGACATATAAAATATATTAACAAAAATG----------------ACA |
| D_grimshawi | scaffold_15252:6427650-6427777 + | A------TAC--TT---AC-ATATGGACCATTAACAGAA-ACCCGTAAATCCG--AACTTGTGC--TGTTTTTTAT---CTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGC-AACAAAA-----------------------GACT----------------ACA |
| Mus_musculus_1 | mmu-mir-125a:1-68 + | C------TGG----------------------------G-TCCCTGAGACCCTTTAACCTGTGA--GGACGTCC-A---GGGTCACAGGTGAGGTTCTTGGGAGCCTGG------------------------------------------------------------------------------- |
| Mus_musculus_3 | mmu-mir-99b:1-70 + | G------G--------------------------CACCC-ACCCGTAGAACCG--ACCTTGCGG--GGCCTTCG-C---CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC----------------------------------------------------------------------------- |
| Mus_musculus_2 | mmu-mir-10b:1-68 + | T------ATA----------------------------TACCCTGTAGAACCG--AATTTGTGT--GGTACCCACA---TAGTCACAGATTCGATTCTAGGGGAATATA------------------------------------------------------------------------------- |
| Mus_musculus_5 | mmu-mir-125b-2:1-71 + | G------CC---------------------------TAG-TCCCTGAGACCCT--AACTTGTGA--GGTATTTTAGTA-ACATCACAAGTCAGGTTCTTGGGACCTAGGC------------------------------------------------------------------------------ |
| Mus_musculus_4 | mmu-mir-99a:1-65 + | C----------------------------------ATAA-ACCCGTAGATCCG--ATCTTGTGG--TGAAGTGGA-----CCGCGCAAGCTCGTTTCTATGGGTCTGTG------------------------------------------------------------------------------- |
| Mus_musculus_7 | mmu-mir-125b-1:1-77 + | T------GCG--CT-----------------CCCCTCAG-TCCCTGAGACCCT--AACTTGTGA--TGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTG--------------------------------------------------------------------------------- |
| Mus_musculus_6 | mmu-mir-100:1-80 + | C------CTG--------------------TTGCCACAA-ACCCGTAGATCCG--AACTTGTGC--TGATTCT-------GCACACAAGCTTGTGTCTATAGGTATGTGTC------------------------------------------------------TGTT----------------AGG |
| Mus_musculus_8 | mmu-mir-10a:1-110 + | G------ACC--TG---TC-T----GTCTTC-TGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAATTTT-G---TGGTCACAAATTCGTATCTAGGGGAATATGTA------------------------------------------------------GTTGACATAAACACTCCGC-TCA |
| Rattus_norvegicus_1 | rno-mir-99a:1-81 + | C------CCA--------------------TTGGCATAA-ACCCGTAGATCCG--ATCTTGTGG--TGAAGTGGA-----CCGCACAAGCTCGTTTCTATGGGTCTGTGGCAGTG-----------------------------------------------------------------------TG |
| Rattus_norvegicus_4 | rno-mir-100:1-80 + | C------CTG--------------------TTGCCACAA-ACCCGTAGATCCG--AACTTGTGC--TGAC---C-A---TGCACACAAGCTTGTGTCTATAGGTATGTGTC------------------------------------------------------TGTT----------------AGG |
| Rattus_norvegicus_5 | rno-mir-99b:1-70 + | G------G--------------------------CACCC-ACCCGTAGAACCG--ACCTTGCGG--GGCCTTCG-C---CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC----------------------------------------------------------------------------- |
| Rattus_norvegicus_2 | rno-mir-10b:1-109 + | C------CAA--AGTTGT----AACGTTGTC-TATATATACCCTGTAGAACCG--AATTTGTGT--GGTACCCACA---TAGTCACAGATTCGATTCTAGGGGAATATATG------------------------------------------------------GTCGATGCAAAAACT-----TCA |
| Rattus_norvegicus_3 | rno-mir-125a:1-85 + | T------GCC--GG-----------------CCTCTGGG-TCCCTGAGACCCTTTAACCTGTGA--GGACGTCC-A---GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCG------------------------------------------------------CCTG-----------------GC |
| Rattus_norvegicus_8 | rno-mir-125b-2:1-88 + | A------CCAGAC-----------------TTTTCCTAG-TCCCTGAGACCCT--AACTTGTGA--GGTATTTTAGTA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCG------------------------------------------------------GA-G----------------AGG |
| Rattus_norvegicus_9 | rno-mir-125b-1:1-87 + | T------GCG--CT-----------------CCCCTCAG-TCCCTGAGACCCT--AACTTGTGA--TGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAG------------------------------------------------------TCGT-----------------GC |
| Rattus_norvegicus_6 | rno-mir-10a:1-110 + | G------ACC--TG---TC-T----GTCTTC-TGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAATTTT-G---TGGTCACAAATTCGTATCTAGGGGAATATGTA------------------------------------------------------GTTGACATAAACACTCCGC-TCA |
| Rattus_norvegicus_7 | rno-mir-3588:1-106 + | C------TGC--TG---GT-ACC----TC-TCCGCCTAG-GTCCCAAGAGCCT--GACTTGTGA--TGTTACTAAAAT-ACCTCACAAGTTAGGGTCTCAGGGACTAGGAAA-------AGTCTGGTTTGA------------------------------------TG----------------CAG |
| Macaca_mulatta_1 | mml-mir-125b-2:1-89 + | A------CCAGAC-----------------TTTTCCTAG-TCCCTGAGACCCT--AACTTGTGA--GGTATTTTAGTA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCG------------------------------------------------------GAGG----------------GGA |
| Macaca_mulatta_2 | mml-mir-100:1-80 + | C------CTG--------------------TTGCCACAA-ACCCGTAGATCCG--AACTTGTGG--TATTAGT-------CCGCACAAGCTTGTGTCTATAGGTATGTGTC------------------------------------------------------TTTT----------------AGG |
| Macaca_mulatta_3 | mml-mir-99b:1-70 + | G------G--------------------------CACCC-ACCCGTAGAACCG--ACCTTGCGG--GGCCTTCG-C---CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC----------------------------------------------------------------------------- |
| Macaca_mulatta_4 | mml-mir-99a:1-81 + | C------CCA--------------------TTGGCATAA-ACCCGTAGATCCG--ATCTTGTGG--TGAAGTGGA-----CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTG-----------------------------------------------------------------------TG |
| Macaca_mulatta_5 | mml-mir-125b-1:1-88 + | T------GCG--CT-----------------CCTCTCAG-TCCCTGAGACCCT--AACTTGTGA--TGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAG------------------------------------------------------TCGT----------------GCT |
| Macaca_mulatta_6 | mml-mir-10b:1-110 + | C------CAGAGG-TTGTAAC----GTTGTC-TATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCATA---TAGTCACAGATTCGATTCTAGGGGAATATATG------------------------------------------------------GTCGATGCAAAAACT-----TCA |
| Macaca_mulatta_7 | mml-mir-10a:1-109 + | G------ATC--TG---TC-T----GTCTTC-TGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAATTTT-G---TGGTCACAAATTCGTATCTAGGGGAATATGTA------------------------------------------------------GTTGACATAAACACTCCGC-T-C |
| Macaca_mulatta_8 | mml-mir-125a:1-86 + | T------GCC--AG-----------------TCTCTGGG-TCCCTGAGACCCTTTAACCTGTGA--GGACATCC-A---GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCG------------------------------------------------------TCTG----------------GCC |
| Pongo_pygmaeus_4 | ppy-mir-100:1-80 + | C------CTG--------------------TTGCCACAA-ACCCGTAGATCCG--AACTTGTGG--TATTAGT-------CCGCACAAGCTTGTATCTATAGGTATGTGTC------------------------------------------------------TGTT----------------AGG |
| Pongo_pygmaeus_5 | ppy-mir-10b:1-110 + | C------CAGAGG-TTGTAAC----GTTGTC-TATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCATA---TAGTCACAGATTCGATTCTAGGGGAATATATG------------------------------------------------------GTCGATGCAAAAACT-----TCA |
| Pongo_pygmaeus_2 | ppy-mir-125b-1:1-88 + | T------GCG--CT-----------------CCTCTCAG-TCCCTGAGACCCT--AACTTGTGA--TGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAG------------------------------------------------------TCGT----------------GCT |
| Pongo_pygmaeus_3 | ppy-mir-10a:1-110 + | G------ATC--TG---TC-T----GTCTTC-TGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAATTTT-G---TGGTCACAAATTCGTATCTAGGGGAATATGTA------------------------------------------------------GTTGACATAAACACTCCGC-TCG |
| Pongo_pygmaeus_1 | ppy-mir-125a:1-86 + | T------GCC--AG-----------------TCTCTAGG-TCCCTGAGACCCTTTAACCTGTGA--GGACATCC-A---GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCG------------------------------------------------------TCTG----------------GCC |
| Pongo_pygmaeus_7 | ppy-mir-125b-2:1-89 + | A------CCAGAC-----------------TTTTCCTAG-TCCCTGAGACCCT--AACTTGTGA--GGTATTTTAGTA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCG------------------------------------------------------GAGG----------------GGA |
| Pongo_pygmaeus_6 | ppy-mir-99a:1-81 + | C------CCA--------------------TTGGCATAA-ACCCGTAGATCCG--ATCTTGTGG--TAAAGTGGA-----CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTG-----------------------------------------------------------------------TG |
| Gorilla_gorilla_2 | ggo-mir-125b-2:1-89 + | A------CCAGAC-----------------TTTTCCTAG-TCCCTGAGACCCT--AACTTGTGA--GGTATTTTAGTA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCG------------------------------------------------------GAGG----------------GGA |
| Gorilla_gorilla_3 | ggo-mir-125a:1-108 + | CCATGTTGCC--AG-----------------TCTCTAGG-TCCCTGAGACCCTTTAACCTGTGA--GGACATCC-A---GGGTCACAGGTGAGGTTCTTGGGAGCCTGGTG------------------------------------------------------TCTGGCCCAACCACACACCTGGG |
| Gorilla_gorilla_4 | ggo-mir-10b:1-110 + | C------CAGACA-TTGTAAC----GTTGTC-TATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCATA---TAGTCACAGATTCGATTCTAGGGGAATATATG------------------------------------------------------GTCGATGCAAAAACT-----TCA |
| Gorilla_gorilla_5 | ggo-mir-125b-1:1-88 + | T------GCG--CT-----------------CCTCTCAG-TCCCTGAGACCCT--AACTTGTGA--TGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAG------------------------------------------------------TCGT----------------GCT |
| Gorilla_gorilla_6 | ggo-mir-100:1-80 + | C------CTG--------------------TTGCCACAA-ACCCGTAGATCCG--AACTTGTGG--TATTAGT-------CCGCACAAGCTTGTATCTATAGGTATGTGTC------------------------------------------------------TGTT----------------AGG |
| Gorilla_gorilla_7 | ggo-mir-10a:1-110 + | G------ATC--TG---TC-T----GTCTTC-TGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAATTTT-G---TGGTCACAAATTCGTATCTAGGGGAATATGTA------------------------------------------------------GTTGACATAAACACTCCGC-TCT |
| Gorilla_gorilla_1 | ggo-mir-99a:1-81 + | C------CCA--------------------TTGGCATAA-ACCCGTAGATCCG--ATCTTGTGG--TGAAGTGGA-----CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTG-----------------------------------------------------------------------TG |
| Homo_sapiens_1 | hsa-mir-125b-2:1-89 + | A------CCAGAC-----------------TTTTCCTAG-TCCCTGAGACCCT--AACTTGTGA--GGTATTTTAGTA-ACATCACAAGTCAGGCTCTTGGGACCTAGGCG------------------------------------------------------GAGG----------------GGA |
| Homo_sapiens_8 | hsa-mir-99a:1-81 + | C------CCA--------------------TTGGCATAA-ACCCGTAGATCCG--ATCTTGTGG--TGAAGTGGA-----CCGCACAAGCTCGCTTCTATGGGTCTGTGTCAGTG-----------------------------------------------------------------------TG |
| Homo_sapiens_7 | hsa-mir-10a:1-110 + | G------ATC--TG---TC-T----GTCTTC-TGTATATACCCTGTAGATCCG--AATTTGTGTAAGGAATTTT-G---TGGTCACAAATTCGTATCTAGGGGAATATGTA------------------------------------------------------GTTGACATAAACACTCCGC-TCT |
| Homo_sapiens_6 | hsa-mir-10b:1-110 + | C------CAGAGG-TTGTAAC----GTTGTC-TATATATACCCTGTAGAACCG--AATTTGTGT--GGTATCCGTA---TAGTCACAGATTCGATTCTAGGGGAATATATG------------------------------------------------------GTCGATGCAAAAACT-----TCA |
| Homo_sapiens_5 | hsa-mir-99b:1-70 + | G------G--------------------------CACCC-ACCCGTAGAACCG--ACCTTGCGG--GGCCTTCG-C---CGCACACAAGCTCGTGTCTGTGGGTCCGTGTC----------------------------------------------------------------------------- |
| Homo_sapiens_4 | hsa-mir-125a:1-86 + | T------GCC--AG-----------------TCTCTAGG-TCCCTGAGACCCTTTAACCTGTGA--GGACATCC-A---GGGTCACAGGTGAGGTTCTTGGGAGCCTGGCG------------------------------------------------------TCTG----------------GCC |
| Homo_sapiens_3 | hsa-mir-125b-1:1-88 + | T------GCG--CT-----------------CCTCTCAG-TCCCTGAGACCCT--AACTTGTGA--TGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAG------------------------------------------------------TCGT----------------GCT |
| Homo_sapiens_2 | hsa-mir-100:1-80 + | C------CTG--------------------TTGCCACAA-ACCCGTAGATCCG--AACTTGTGG--TATTAGT-------CCGCACAAGCTTGTATCTATAGGTATGTGTC------------------------------------------------------TGTT----------------AGG |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:17566355-17566484 + | CCCA---------AGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCATA-CCCAAT--A |
| D_simulans | chr2L:17270490-17270619 + | CCCA---------AGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCATA-CCCAAT--G |
| D_yakuba | chr2R:3533165-3533294 - | CCCA---------AGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTTC-----TCATA-CCCAAT--G |
| D_eugracilis | scf7180000409016:190114-190244 + | CCCA---------AGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTAC------AAATTAC-----TCAGATCTCAAC--T |
| D_elegans | scf7180000491046:269607-269743 + | CCCA---------AGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCCACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTAC------AAGTTACTCAAACAAAA-AACAAAGCG |
| D_ananassae | scaffold_12916:3309677-3309806 - | CCAG---------AGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTAC------AAACTAC-----AAATG-ACATAT--T |
| D_pseudoobscura | chr4_group3:10867616-10867737 - | TCTC---------AGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTAC------TA----------TCAAA-AACAGC--A |
| D_persimilis | super_8:2078713-2078834 - | TCTC---------AGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTA-TTTCGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTAC------TA----------TCAAA-AACAGC--A |
| D_willistoni | scaffold_180764:940183-940306 - | TTCT----CA--GA---------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTT-ATTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTAC------AAAAA-C-----CAAAA-CGCAAA--A |
| D_virilis | scaffold_12963:16493143-16493272 + | GACAACATTCGTGAGTGC----CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAA-TTTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTAC------AATTAAC-----AAA------AAT--A |
| D_grimshawi | scaffold_15252:13906813-13906947 + | GTGG---------TGTGTGTGCCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTT-TTTTGACCA------TAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACTTCCA-----TTCAAA-TATA-ACCAGC--A |
| Caenorhabditis_elegans | cel-mir-124:1-96 + | GTCC--------------CACTTGTCATCTGGCATGCA----CCCTAGTGACTTTAGTGGACATCTAAGTC-T--------TCCAACTAAGGCACGCGGTGAATGCCACGTGGCCATGA----------------------TGG---------------G |
| Caenorhabditis_briggsae | cbr-mir-124:1-98 + | TTTC--------------CAGTCGTCATATGGC----GTCCACCTGAGTGACTTTAGTGGACATGTATAGT-T--------TCCAACTAAGGCACGCGGTGAATGCCACGTG--G---CAATTCTGG------G---------AT--------------- |
| Mus_musculus_1 | mmu-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Mus_musculus_3 | mmu-mir-124-3:1-68 + | -----------------------------------------CTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAG------------------------------------------------ |
| Mus_musculus_2 | mmu-mir-124-2:1-109 + | ATCAAGATCA--GAGAC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Rattus_norvegicus_1 | rno-mir-124-2:1-109 + | ATCAAGATCA--GAGAC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Rattus_norvegicus_2 | rno-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Rattus_norvegicus_3 | rno-mir-124-3:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Macaca_mulatta_1 | mml-mir-124a-2:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Macaca_mulatta_2 | mml-mir-124a-1:1-109 + | ATCAAGATCA--GAGGC--------------------TCTGCCCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Pongo_pygmaeus_2 | ppy-mir-124a:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCCCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Pongo_pygmaeus_1 | ppy-mir-124-2:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Gorilla_gorilla | ggo-mir-124a:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Homo_sapiens_1 | hsa-mir-124-1:1-85 + | A-------------GGC--------------------CTCTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATGTC--CATACAATTAAGGCACGCGGTGAATGCCAAGAATGGG------------GCTG---------------------------- |
| Homo_sapiens_3 | hsa-mir-124-3:1-87 + | T-----------GAGGGCC---------------------CCTCTGCGTGTTCACAGCGGACCTTGATTTA-ATGTC--TATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGCG-----CCTCC--------------------------------- |
| Homo_sapiens_2 | hsa-mir-124-2:1-109 + | ATCAAGATTA--GAGGC--------------------TCTGCTCTCCGTGTTCACAGCGGACCTTGATTTA-ATGTC---ATACAATTAAGGCACGCGGTGAATGCCAAGAGCGGAG-----CCTACGGCTGCA-----CTTGAA--------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:18472300-18472439 + | AA--------TA-----TTGGCATTGGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAT-------AA--------G----------------GC |
| D_simulans | chr2L:18161211-18161350 + | AA--------TA-----TTGGCATTGGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAT-------AA--------G----------------GC |
| D_yakuba | chr2R:4989099-4989238 + | AA--------TA-----TTGGCATTGGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAT-------AA--------G----------------GC |
| D_eugracilis | scf7180000409447:414929-415073 + | AA--------TA-----TTGGCATTAGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATGA------------------------AAAAT--AAACAAA--------G----------------GC |
| D_elegans | scf7180000491338:2439758-2439904 + | AA--------TA-----TTGGCATTAGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAAAGAAAACCCA--------G----------------GC |
| D_ananassae | scaffold_12916:2379461-2379598 + | AA--------TA-----TTGGTATTGGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAATAC------------------------AAAA---------A--------A----------------GA |
| D_pseudoobscura | chr4_group3:3635996-3636136 + | AG--------TA-----TTGGTATGAGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTATACA----------------------A-AAAAA-------AA--------A----------------GC |
| D_persimilis | super_2335:2506-2645 + | AG--------TA-----TTGGTATGAGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTATACA------------------------AAAAA-------AA--------A----------------GC |
| D_willistoni | scaffold_180708:11623324-11623458 + | AT--------TA-----TTGGTATTAGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTGGCAA------------------------------------AAA------------------------GC |
| D_virilis | scaffold_12963:18451638-18451806 + | TA--------TTACACATTGGTATTAGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAACAAAAAAACAAAAACAATTACAAAAAAAT-------AA--------G----------------AA |
| D_grimshawi | scaffold_15252:6428908-6429045 + | CA--------CA-----TTGGTATTAGTGACATGTGCAAATGTTTGTATGGCTGATT-CCCTGAGACCCT--AACTTGTG--ACTTTTAATAC-CAGTTTCACAAGTTTTGATCTCCGGTATTGGACGCAAACTTGCTGATGTTAGTAA------------------------AAAA---------A--------A----------------AC |
| Mus_musculus_1 | mmu-mir-125a:1-68 + | CT---------------------------------------------------GGGT-CCCTGAGACCCTTTAACCTGTG--AGGACGT---C-CAGGGTCACAGGTGAGGTTCTTGGGAGCCTG--------------------------------------------------------------G-------------------------- |
| Mus_musculus_3 | mmu-mir-99b:1-70 + | GG--------C-----------------------------------------ACCCA-CCCGTAGAACCG--ACCTTGCG--GGGCCTTC----GCCGCACACAAGCTCGTGTCTGTGGGTCC--------------------------------------------------------------GTGTC------------------------ |
| Mus_musculus_2 | mmu-mir-10b:1-68 + | TA--------TA-------------------------------------------TACCCTGTAGAACCG--AATTTGTG--TGGTACC-C-A-CATAGTCACAGATTCGATTCTAGGGGAAT--------------------------------------------------------------ATA-------------------------- |
| Mus_musculus_5 | mmu-mir-125b-2:1-71 + | GC--------------------------------------------------CTAGT-CCCTGAGACCCT--AACTTGTG--AGGTATTTTAG-TAACATCACAAGTCAGGTTCTTGGGACCTAG--------------------------------------------------------------GC------------------------- |
| Mus_musculus_4 | mmu-mir-99a:1-65 + | C---------------------------------------------------ATAAA-CCCGTAGATCCG--ATCTTGTG--GTGAAGTGG-----ACCGCGCAAGCTCGTTTCTATGGGTCT--------------------------------------------------------------GTG-------------------------- |
| Mus_musculus_7 | mmu-mir-125b-1:1-77 + | TG--------CGCTC----CC------------------------------CTCAGT-CCCTGAGACCCT--AACTTGTG--ATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTG------------------------------------------------------------------------------------------ |
| Mus_musculus_6 | mmu-mir-100:1-80 + | CC--------TG-----TTGC------------------------------CACAAA-CCCGTAGATCCG--AACTTGTG--CTGATTC-------TGCACACAAGCTTGTGTCTATAGGTAT--------------------------------------------------------------GTGTCTGTT-A----------------GG |
| Mus_musculus_8 | mmu-mir-10a:1-110 + | GA--------CCTGT----C-TG--------------------TCTTCTG-TATATACCCTGTAGATCCG--AATTTGTGTAAGGAATT---T-TGTGGTCACAAATTCGTATCTAGGGGAAT--------------------------------------------------------------ATGTAGTTGA-CATAAACACTCCGCT-CA |
| Rattus_norvegicus_1 | rno-mir-99a:1-81 + | CC--------CA-----TTGG------------------------------CATAAA-CCCGTAGATCCG--ATCTTGTG--GTGAAGTGG-----ACCGCACAAGCTCGTTTCTATGGGTCT--------------------------------------------------------------GTGGCAGT--G----------------TG |
| Rattus_norvegicus_4 | rno-mir-100:1-80 + | CC--------TG-----TTGC------------------------------CACAAA-CCCGTAGATCCG--AACTTGTG--CTGAC-------CATGCACACAAGCTTGTGTCTATAGGTAT--------------------------------------------------------------GTGTCTGTT-A----------------GG |
| Rattus_norvegicus_5 | rno-mir-99b:1-70 + | GG--------C-----------------------------------------ACCCA-CCCGTAGAACCG--ACCTTGCG--GGGCCTTC----GCCGCACACAAGCTCGTGTCTGTGGGTCC--------------------------------------------------------------GTGTC------------------------ |
| Rattus_norvegicus_2 | rno-mir-10b:1-109 + | CCAAAG-----TTGT-A--A-CG--------------------TTGTCTA-TATATACCCTGTAGAACCG--AATTTGTG--TGGTACC-C-A-CATAGTCACAGATTCGATTCTAGGGGAAT--------------------------------------------------------------ATATGGTCGA-TGCAAAAACT----T-CA |
| Rattus_norvegicus_3 | rno-mir-125a:1-85 + | TG--------CCGGC----CT------------------------------CTGGGT-CCCTGAGACCCTTTAACCTGTG--AGGACGT---C-CAGGGTCACAGGTGAGGTTCTTGGGAGCCTG--------------------------------------------------------------GCGCCT--G----------------GC |
| Rattus_norvegicus_8 | rno-mir-125b-2:1-88 + | ACCAGA------CTT----TT------------------------------CCTAGT-CCCTGAGACCCT--AACTTGTG--AGGTATTTTAG-TAACATCACAAGTCAGGCTCTTGGGACCTAG--------------------------------------------------------------GCGGAG--A----------------GG |
| Rattus_norvegicus_9 | rno-mir-125b-1:1-87 + | TG--------CGCTC----CC------------------------------CTCAGT-CCCTGAGACCCT--AACTTGTG--ATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC--------------------------------------------------------------GAGTCGT------------------GC |
| Rattus_norvegicus_6 | rno-mir-10a:1-110 + | GA--------CCTGT----C-TG--------------------TCTTCTG-TATATACCCTGTAGATCCG--AATTTGTGTAAGGAATT---T-TGTGGTCACAAATTCGTATCTAGGGGAAT--------------------------------------------------------------ATGTAGTTGA-CATAAACACTCCGCT-CA |
| Rattus_norvegicus_7 | rno-mir-3588:1-106 + | CT--------GC-------------------------TGGTACCTCTCCG-CCTAGG-TCCCAAGAGCCT--GACTTGTG--ATGTTACTAAA-ATACCTCACAAGTTAGGGTCTCAGGGACTAGGAAAAGTCTGGT------------------------------------------------------TTGA-TGC-------------AG |
| Macaca_mulatta_1 | mml-mir-125b-2:1-89 + | ACCAGA------CTT----TT------------------------------CCTAGT-CCCTGAGACCCT--AACTTGTG--AGGTATTTTAG-TAACATCACAAGTCAGGCTCTTGGGACCTAG--------------------------------------------------------------GCGGAGG-G----------------GA |
| Macaca_mulatta_2 | mml-mir-100:1-80 + | CC--------TG-----TTGC------------------------------CACAAA-CCCGTAGATCCG--AACTTGTG--GTATTAG-------TCCGCACAAGCTTGTGTCTATAGGTAT--------------------------------------------------------------GTGTCTTTT-A----------------GG |
| Macaca_mulatta_3 | mml-mir-99b:1-70 + | GG--------C-----------------------------------------ACCCA-CCCGTAGAACCG--ACCTTGCG--GGGCCTTC----GCCGCACACAAGCTCGTGTCTGTGGGTCC--------------------------------------------------------------GTGTC------------------------ |
| Macaca_mulatta_4 | mml-mir-99a:1-81 + | CC--------CA-----TTGG------------------------------CATAAA-CCCGTAGATCCG--ATCTTGTG--GTGAAGTGG-----ACCGCACAAGCTCGCTTCTATGGGTCT--------------------------------------------------------------GTGTCAGT--G----------------TG |
| Macaca_mulatta_5 | mml-mir-125b-1:1-88 + | TG--------CGCTC----CT------------------------------CTCAGT-CCCTGAGACCCT--AACTTGTG--ATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC--------------------------------------------------------------GAGTCGT-G----------------CT |
| Macaca_mulatta_6 | mml-mir-10b:1-110 + | CCAGAGGT----TGT-A--A-CG--------------------TTGTCTA-TATATACCCTGTAGAACCG--AATTTGTG--TGGTATC-C-A-TATAGTCACAGATTCGATTCTAGGGGAAT--------------------------------------------------------------ATATGGTCGA-TGCAAAAACT----T-CA |
| Macaca_mulatta_7 | mml-mir-10a:1-109 + | GA--------TCTGT----C-TG--------------------TCTTCTG-TATATACCCTGTAGATCCG--AATTTGTGTAAGGAATT---T-TGTGGTCACAAATTCGTATCTAGGGGAAT--------------------------------------------------------------ATGTAGTTGA-CATAAACACTCCGC--TC |
| Macaca_mulatta_8 | mml-mir-125a:1-86 + | TG--------CCAGT----CT------------------------------CTGGGT-CCCTGAGACCCTTTAACCTGTG--AGGACAT---C-CAGGGTCACAGGTGAGGTTCTTGGGAGCCTG--------------------------------------------------------------GCGTCTG-G----------------CC |
| Pongo_pygmaeus_4 | ppy-mir-100:1-80 + | CC--------TG-----TTGC------------------------------CACAAA-CCCGTAGATCCG--AACTTGTG--GTATTAG-------TCCGCACAAGCTTGTATCTATAGGTAT--------------------------------------------------------------GTGTCTGTT-A----------------GG |
| Pongo_pygmaeus_5 | ppy-mir-10b:1-110 + | CCAGAGGT----TGT-A--A-CG--------------------TTGTCTA-TATATACCCTGTAGAACCG--AATTTGTG--TGGTATC-C-A-TATAGTCACAGATTCGATTCTAGGGGAAT--------------------------------------------------------------ATATGGTCGA-TGCAAAAACT----T-CA |
| Pongo_pygmaeus_2 | ppy-mir-125b-1:1-88 + | TG--------CGCTC----CT------------------------------CTCAGT-CCCTGAGACCCT--AACTTGTG--ATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC--------------------------------------------------------------GAGTCGT-G----------------CT |
| Pongo_pygmaeus_3 | ppy-mir-10a:1-110 + | GA--------TCTGT----C-TG--------------------TCTTCTG-TATATACCCTGTAGATCCG--AATTTGTGTAAGGAATT---T-TGTGGTCACAAATTCGTATCTAGGGGAAT--------------------------------------------------------------ATGTAGTTGA-CATAAACACTCCGCT-CG |
| Pongo_pygmaeus_1 | ppy-mir-125a:1-86 + | TG--------CCAGT----CT------------------------------CTAGGT-CCCTGAGACCCTTTAACCTGTG--AGGACAT---C-CAGGGTCACAGGTGAGGTTCTTGGGAGCCTG--------------------------------------------------------------GCGTCTG-G----------------CC |
| Pongo_pygmaeus_7 | ppy-mir-125b-2:1-89 + | ACCAGA------CTT----TT------------------------------CCTAGT-CCCTGAGACCCT--AACTTGTG--AGGTATTTTAG-TAACATCACAAGTCAGGCTCTTGGGACCTAG--------------------------------------------------------------GCGGAGG-G----------------GA |
| Pongo_pygmaeus_6 | ppy-mir-99a:1-81 + | CC--------CA-----TTGG------------------------------CATAAA-CCCGTAGATCCG--ATCTTGTG--GTAAAGTGG-----ACCGCACAAGCTCGCTTCTATGGGTCT--------------------------------------------------------------GTGTCAGT--G----------------TG |
| Gorilla_gorilla_2 | ggo-mir-125b-2:1-89 + | ACCAGA------CTT----TT------------------------------CCTAGT-CCCTGAGACCCT--AACTTGTG--AGGTATTTTAG-TAACATCACAAGTCAGGCTCTTGGGACCTAG--------------------------------------------------------------GCGGAGG-G----------------GA |
| Gorilla_gorilla_3 | ggo-mir-125a:1-108 + | CCAT--GTTGCCAGT----CT------------------------------CTAGGT-CCCTGAGACCCTTTAACCTGTG--AGGACAT---C-CAGGGTCACAGGTGAGGTTCTTGGGAGCCTG--------------------------------------------------------------GTGTCTG-GCCCAACCACACACCTGGG |
| Gorilla_gorilla_4 | ggo-mir-10b:1-110 + | CCAGACAT----TGT-A--A-CG--------------------TTGTCTA-TATATACCCTGTAGAACCG--AATTTGTG--TGGTATC-C-A-TATAGTCACAGATTCGATTCTAGGGGAAT--------------------------------------------------------------ATATGGTCGA-TGCAAAAACT----T-CA |
| Gorilla_gorilla_5 | ggo-mir-125b-1:1-88 + | TG--------CGCTC----CT------------------------------CTCAGT-CCCTGAGACCCT--AACTTGTG--ATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC--------------------------------------------------------------GAGTCGT-G----------------CT |
| Gorilla_gorilla_6 | ggo-mir-100:1-80 + | CC--------TG-----TTGC------------------------------CACAAA-CCCGTAGATCCG--AACTTGTG--GTATTAG-------TCCGCACAAGCTTGTATCTATAGGTAT--------------------------------------------------------------GTGTCTGTT-A----------------GG |
| Gorilla_gorilla_7 | ggo-mir-10a:1-110 + | GA--------TCTGT----C-TG--------------------TCTTCTG-TATATACCCTGTAGATCCG--AATTTGTGTAAGGAATT---T-TGTGGTCACAAATTCGTATCTAGGGGAAT--------------------------------------------------------------ATGTAGTTGA-CATAAACACTCCGCT-CT |
| Gorilla_gorilla_1 | ggo-mir-99a:1-81 + | CC--------CA-----TTGG------------------------------CATAAA-CCCGTAGATCCG--ATCTTGTG--GTGAAGTGG-----ACCGCACAAGCTCGCTTCTATGGGTCT--------------------------------------------------------------GTGTCAGT--G----------------TG |
| Homo_sapiens_1 | hsa-mir-125b-2:1-89 + | ACCAGA------CTT----TT------------------------------CCTAGT-CCCTGAGACCCT--AACTTGTG--AGGTATTTTAG-TAACATCACAAGTCAGGCTCTTGGGACCTAG--------------------------------------------------------------GCGGAGG-G----------------GA |
| Homo_sapiens_8 | hsa-mir-99a:1-81 + | CC--------CA-----TTGG------------------------------CATAAA-CCCGTAGATCCG--ATCTTGTG--GTGAAGTGG-----ACCGCACAAGCTCGCTTCTATGGGTCT--------------------------------------------------------------GTGTCAGT--G----------------TG |
| Homo_sapiens_7 | hsa-mir-10a:1-110 + | GA--------TCTGT----C-TG--------------------TCTTCTG-TATATACCCTGTAGATCCG--AATTTGTGTAAGGAATT---T-TGTGGTCACAAATTCGTATCTAGGGGAAT--------------------------------------------------------------ATGTAGTTGA-CATAAACACTCCGCT-CT |
| Homo_sapiens_6 | hsa-mir-10b:1-110 + | CCAGAGGT----TGT-A--A-CG--------------------TTGTCTA-TATATACCCTGTAGAACCG--AATTTGTG--TGGTATC-C-G-TATAGTCACAGATTCGATTCTAGGGGAAT--------------------------------------------------------------ATATGGTCGA-TGCAAAAACT----T-CA |
| Homo_sapiens_5 | hsa-mir-99b:1-70 + | GG--------C-----------------------------------------ACCCA-CCCGTAGAACCG--ACCTTGCG--GGGCCTTC----GCCGCACACAAGCTCGTGTCTGTGGGTCC--------------------------------------------------------------GTGTC------------------------ |
| Homo_sapiens_4 | hsa-mir-125a:1-86 + | TG--------CCAGT----CT------------------------------CTAGGT-CCCTGAGACCCTTTAACCTGTG--AGGACAT---C-CAGGGTCACAGGTGAGGTTCTTGGGAGCCTG--------------------------------------------------------------GCGTCTG-G----------------CC |
| Homo_sapiens_3 | hsa-mir-125b-1:1-88 + | TG--------CGCTC----CT------------------------------CTCAGT-CCCTGAGACCCT--AACTTGTG--ATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGC--------------------------------------------------------------GAGTCGT-G----------------CT |
| Homo_sapiens_2 | hsa-mir-100:1-80 + | CC--------TG-----TTGC------------------------------CACAAA-CCCGTAGATCCG--AACTTGTG--GTATTAG-------TCCGCACAAGCTTGTATCTATAGGTAT--------------------------------------------------------------GTGTCTGTT-A----------------GG |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:20616602-20616729 + | ----CATTCGA----------------------------------G------AATTTCCACCTGCAACA-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGTTT-TT-C-AAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGATGACAACGAAAG--CCTA----------------GTGAAC |
| D_simulans | chr2L:20179920-20180047 + | ----CATTCGA----------------------------------G------AATTTGCACCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGTTT-TT-T-AAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGCTGACATCGAAAG--CCGA----------------GCGAAC |
| D_yakuba | chr2R:6964793-6964921 + | ----TATTCCA----------------------------------G------AATTTCCTCCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTGTTT-TT-CCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGATGACAACGAAGT--ACGA----------------GTAAAC |
| D_eugracilis | scf7180000409767:678694-678826 - | ----TTTTCCA----------------------------------GAA----AATGATTATCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTACTTTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTCGTTGACAACGAATT--TCGA----------------GTGAAA |
| D_elegans | scf7180000491186:607671-607801 + | ----TATTAAA---------------------------------------CAAATTATTACCTGCAACG-CTGTG-TGTAGCTGGTTGACATCGGGTCAGATCTATTTTTT-CAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTG-GTTGGTGACAACGAAAT--ACGA----------------GTGAAC |
| D_ananassae | scaffold_12916:7117508-7117634 + | ----TTCGT------------------------------------G------AATGATTATCTGCAACG-CTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTATCT-TT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGATGACAACAAAGT--ACAA----------------GTGAAA |
| D_pseudoobscura | chr4_group3:7699977-7700121 - | ----GACGCGT----------------------------------G------TGTGCTTATGTACAACGGCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTATTT-TA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTATC-AGTG-GTTGATTCCAACAAAAA--ACAAAAGGCGCCAACAAATAATAAAG |
| D_persimilis | super_1:9145698-9145865 - | ----TATTTGTA----------TGTGTA-TTTGTATGTGACGCGTG------TGTGCTTATGTACAACGGCTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTATTT-TA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTATC-AGTG-GTTGATTCCAACAAAAA--ACAAAAGGCGCCAACAAATAATAAAG |
| D_willistoni | scaffold_180708:2027542-2027651 + | ----TA----------------------------------------------------------CAACA-CTGAA-TGTAGCTGGTTGACATCGGGTCAGATCTATTTATT-TGAAGCATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGATCCCAACAAAAA--GCAA-----------------TGGAA |
| D_virilis | scaffold_12963:13475783-13475914 - | ----CAAACGAAGATATAT--ATTGCCAATC--------------G------AAT-CACATTCACAACG-CTGTG-TGTAGTTGGTTGACATCGGGTCAGATCTATTT-CT-GAAAGCATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGAAGCCAACAA------------------------------- |
| D_grimshawi | scaffold_15126:6389834-6389991 + | ----CAAACAAAACTATATACATGATTAATT---------------------TGAATTTATTTACAACG-CTGTA-TGTAGCTGGTTGACATCGGGTCAGATCTATTT-AT-TCGAGTATTTGGTCCCCTTCAACCAGCTGTAGC-AGTG-GTTGATGTCAACAAG-TGAACTTAAG-----AAC-AATAGTGAAA |
| Mus_musculus_1 | mmu-mir-133a-2:1-104 + | ----AGAAG----------------------------------------CCAAA-------------TG-CTTTGCTGAAGCTGGT-AAAATGGAACCAAATCAGCTG-TT-GGATGGATTTGGTCCCCTTCAACCAGCTGTAGCT-GCGCATTGATCACGCCGCA------------------------------ |
| Mus_musculus_3 | mmu-mir-133b:1-119 + | ----CCTCCAA------------------------------------AGGGA-GTGGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTCTTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAAAGCTCAA-T--ATTTG-----------------GAGA |
| Mus_musculus_2 | mmu-mir-133a-1:1-68 + | ----G----------------------------------------------------------------------CTAAAGCTGGT-AAAATGGAACCAAATCGCCTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGC--------------------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-3582:1-118 + | ----GCTGGCT----GTCC--TGTGG---------------------CAAT-------------CAATG-CATAGCTACAGCTGGT-TGAAGGGGACCAAATCCATTG-AA-GAGGCGATTTGGTTCCATTTTACCAGCTTTAGCA-AAGCATTGCCGCTGCTG-----------------------------GTT |
| Rattus_norvegicus_2 | rno-mir-133a:1-87 + | ----C------------------------------------------------------------AATG-CTTTGCTAAAGCTGGT-AAAATGGAACCAAATCGCCTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGCT-ATGCATTGA---------------------------------------- |
| Rattus_norvegicus_3 | rno-mir-133b:1-84 + | ----C------------------------------------------------------------------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTCTTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAA------------------------------------- |
| Macaca_mulatta_1 | mml-mir-133a:1-87 + | ----A-----------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGCCTC-TT-CAATGGATTT-GTCCCCTTCAACCAGCTGTAGCT-ATGCATTGA---------------------------------------- |
| Macaca_mulatta_2 | mml-mir-133b:1-119 + | ----CCTCAGA------------------------------------AGAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTCTTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATTCCCAG-T--CCTTG-----------------GAGA |
| Macaca_mulatta_3 | mml-mir-133c:1-102 + | ----GGGAG----------------------------------------CCAAA-------------TG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGACTG-TC-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGCT-GTGCATTGATGGCGCCG-------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-133a:1-87 + | ----A-----------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGCCTC-TT-CAATGGATTT-GTCCCCTTCAACCAGCTGTAGCT-ATGCATTGA---------------------------------------- |
| Pongo_pygmaeus_3 | ppy-mir-133b:1-119 + | ----CCTCAGA------------------------------------AGAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTCTTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATGCCAAG-T--ACTTG-----------------GAGA |
| Pongo_pygmaeus_1 | ppy-mir-133c:1-102 + | ----GGGAG----------------------------------------CCAAA-------------TG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGACTG-TC-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGCT-GTGCATTGATGGCGCCG-------------------------------- |
| Gorilla_gorilla_2 | ggo-mir-133a:1-88 + | ----A-----------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGCCTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGCT-ATGCATTGA---------------------------------------- |
| Gorilla_gorilla_1 | ggo-mir-133b:1-110 + | GTCACCTCAGA------------------------------------AGAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTCTTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATGCC--------------------------------- |
| Homo_sapiens_1 | hsa-mir-133b:1-119 + | ----CCTCAGA------------------------------------AGAAAGA-TGCCC-----------CCTGCTCTGGCTGGT-CAAACGGAACCAAGTCCGTCTTCC-TGAGAGGTTTGGTCCCCTTCAACCAGCTACAGC-AGGGC--TGGCAATGCCCAG-T--CCTTG-----------------GAGA |
| Homo_sapiens_3 | hsa-mir-133a-2:1-102 + | ----GGGAG----------------------------------------CCAAA-------------TG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGACTG-TC-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGCT-GTGCATTGATGGCGCCG-------------------------------- |
| Homo_sapiens_2 | hsa-mir-133a-1:1-88 + | ----A-----------------------------------------------------------CAATG-CTTTGCTAGAGCTGGT-AAAATGGAACCAAATCGCCTC-TT-CAATGGATTTGGTCCCCTTCAACCAGCTGTAGCT-ATGCATTGA---------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:11952744-11952864 - | TTACGATG-------------------------------------------GCGTC-GCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAA-----------TCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATAAAAA-----------------------------------GAG |
| D_simulans | chr2R:10688339-10688459 - | TTACGATG-------------------------------------------GCGTC-GCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAA-----------TCC-AAATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATCAAAA-----------------------------------GCG |
| D_yakuba | chr2R:17032219-17032325 + | CC---------------------------------------------------------CAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGACA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATTAAAA-----------------------------------AAG |
| D_eugracilis | scf7180000409672:857315-857459 - | TTAAATGG-------------------------------------------TCGAC-GGCAATCTCCAATGGCCACGTGTATACTCGTAGCGATAACCTGATA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCACCGA-GATTTGTTCAGCAATCAAACCAAGCCACTGAAAG---CTATAAAAAAA-------CTG |
| D_elegans | scf7180000491107:959925-960044 - | TTAAAGTG-------------------------------------------GCGAC-GGCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGATA-----------TCC--AATGTTATTGCTTGAGAATACACGTAGTTCAGCGA-GATTTGTTCAGCAATCAAAC-----------------------------------GGA |
| D_ananassae | scaffold_13266:15447223-15447345 + | TTAAAGTG-------------------------------------------GCAACCTGGAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACGTGAAA-----------TGCGAAATGTTATTGCTTGAGAATACACGTAGTTCAGAGA-GATTTGTTCAGCAATCGAAG-----------------------------------TGG |
| D_pseudoobscura | chr3:16385856-16386036 - | TTAAGATG-----------ACAGCGACGGCC-----AAGGCAATGCCGACGGCGA-CTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATA-----------TCC-GAATGTTATTGCTTGAGAATACACGTAGTTTAACAA-GATTCGTTCAGCAATCAAACTGAA--ACGGAAAGTGTCTGTGAAAGGTGTCCTTAAAG |
| D_persimilis | super_4:376928-377074 + | TTAAGATG-----------ACAGCGACGGCCACGCCACGGCAATGCCGACGGCGA-CTAGAATCTTCAACGGCCACGTGTATACTCATAGCTATAACCTGATA-----------TCC-GAATGTTATTGCTTGAGAATACACGTAGTTTAACAA-GATTCGTTCAGCAATCA----------------------------------------- |
| D_willistoni | scaffold_181141:1110993-1111093 - | TTT----------------------------------------------------------------AATGGCCACGTGTATTCTTATAGCTGTAACCTGTTA-----------TACAAAATGTTATTGCTTGAGAATACACGTAGTTAACT-A-GATTCGTTCAACGGGTCAAA-----------------------------------CAA |
| D_virilis | scaffold_10468:1951-2100 - | GTACGTCGGAGCAGACACGACAGC---GGAC-----ACAACAAT-----TGGAAA-TTGGAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGTAC---------AATC--AAATGTTATTGCTTGAGAATACACGTAGTTAACA-A-GATTCTCTCAACGATCCAA------------------------------------TAA |
| D_grimshawi | scaffold_15245:16918481-16918602 - | GGAGATTG-------------------------------------------GAAAATTAAAATCTGAAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAC---------AATC--AAATGTTATTGCTTGAGAATACACGTAGTTAACA-A-GATTGCCTCAACGACTCCAA-----------------------------------TAA |
| Caenorhabditis_elegans | cel-mir-234:1-96 + | CAAAAA----------------------------------------------------ATGAT---------CAAACGGTATTCCAGAGTTGATAATAAAAATGCGTCAGTCCGCAA--TCTATTATTGCTCGAGAATACCCTTTGACTACTAT-G--------TGTA--------------------------------------------- |
| Caenorhabditis_briggsae | cbr-mir-234:1-96 + | GACTCT---------------A-----------------------------------GCAAAGAT-------CAAACGGTATTCCTGAGTGAATAATAAAAATGAGTC------CAT--TCTATTATTGCTCGAGAATACCCTTTGACAAGC-T----------------GAAAA-----------------------------------GTG |
| Mus_musculus | mmu-mir-137:1-73 + | CTT------------------------------------------------------------------CGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG------------------------------------------------------------- |
| Rattus_norvegicus | rno-mir-137:1-102 + | GGCCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Macaca_mulatta | mml-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Homo_sapiens | hsa-mir-137:1-102 + | GGTCCT----------------------------------------------------CTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGAT-----------TAC--GTTGTTATTGCTTAAGAATACGCGTAGTCGAGG-AGAGTACCAGCGGCA--------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243249-11243353 - | CCAA----GCCAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGAC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--GCGGCAGCG- |
| D_simulans | chr3R:10237822-10237926 + | CCAA----GCCAT---------------------AGTTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGAC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--TCGGCAGCG- |
| D_yakuba | chr3R:15188577-15188681 + | CCAA----GCCAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTCGCC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATC--TCGGCAACT- |
| D_eugracilis | scf7180000409281:109534-109638 + | CCGA----TATAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTTGCC-TATTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--GTT--TCGGCATCT- |
| D_elegans | scf7180000491080:1007119-1007223 - | CCGA----CATAT---------------------AATTCTTA-CGTAACTCCTCAAAG-GGTTG-TGAAATGTTCCCA--CTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--TCAGCAACTG |
| D_ananassae | scaffold_13340:12827611-12827739 - | ACAAGAATCCCC-TCAAAAAAGGACGATCCATCGAGTTCTTA-CGTAACTCCTCAAAG-GGCTG-TGAAATGTTGCCA--TTAT-CT-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGGGA--ATC-GTCAGAAAAC- |
| D_pseudoobscura | chr2:9824930-9825029 + | CC-------CCA------------------------TACTTA-CGTAACCCATCAAAC-GGTTG-TGAAATGTTGCAT--TTAT-CA-AATCATATCACAGCCAT-TTTGATGAGTTTCGTGTGG--AATGGCCAGCAATC- |
| D_persimilis | super_0:10660066-10660165 - | CC-------CCA------------------------TACTTA-CGTAACCCATCAAAC-GGTTG-TGAAATGTTGCAT--TTAT-CA-AATCATATCACAGCCAT-TTTGATGAGTTTCGTGTGG--AATGGCCAGCAATC- |
| D_willistoni | scaffold_181089:2143204-2143324 - | CCGT----TCCG-GCAAAAGATGG---------AATTTCTTA-CGTAACTCTTCAAGGGGGTTG-TGAAATGTTGCCATTTTATTCA-ACTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGAGTATT--CCTGCAACA- |
| D_virilis | scaffold_13047:13335625-13335725 + | CCAC----TC------------------------AATTCTTG-CGTAACTCTTCAAGG-GGTTG-TGAAATGTTGCCG--TTAT-CA-AGTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--GCTTAAATT- |
| D_grimshawi | scaffold_14906:4357674-4357778 - | CCAA----GCCC------------------ACCCAATTCTTG-CGTAACTCTTCAAGG-GGTTG-TGAAATGTGGGTA--TTAT-CA-AGTCATATCACAGCCAT-TTTGATGAGTTTCGTGCGA--ATT--GCT---TTCA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA----C--A------------------------GTAT-ACAGAAAGCCATCAAAGCGGTGGTTGATGTGTTGCA-AATTAT-GACTTTCATATCACAGCCAGCTTTGATGTGCTGCCTGT------T--G---CACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243115-11243212 - | CACG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CACAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_simulans | chr3R:10237959-10238056 + | CGCG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_yakuba | chr3R:15188722-15188819 + | CACG-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GAACTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_eugracilis | scf7180000409281:109673-109770 + | CGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_elegans | scf7180000491080:1006986-1007083 - | CGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGCTTGT-GACCTTATGT---ATT----CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_ananassae | scaffold_13340:12827469-12827566 - | C--A-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAAGGCTTGT-GACCTTATGT---ATTT---CGCAATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAC |
| D_pseudoobscura | chr2:9825076-9825174 + | AGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ACTC---TTGAATCATATCACAGCCAT-TTTGACGAGTTTGGGTACAGAAATTTCAA |
| D_persimilis | super_0:10659921-10660019 - | AGCA-----------------------------------------------------TCTTTCTTATACCATGTCGTTAAAATGTTTGT-GACCTTATGT---ACTC---TTGAATCATATCACAGCCAT-TTTGACGAGTTTGGGTACAGAAATTTCAA |
| D_willistoni | scaffold_181089:2143062-2143162 - | TGCA-----------------------------------------------------ACTTTCTTATACCATGTCGTTAAAATGTTTGT-GACTTTATGTTGTGTC----TCTATTCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_virilis | scaffold_13047:13335778-13335875 + | TGCA-----------------------------------------------------ATTTTCTTATACCATGTCGTTAAAATGCCTGT-GACCTTATGT---ATT----TTATATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATCTCAA |
| D_grimshawi | scaffold_14906:4357489-4357639 - | CGTGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTTCTCCTTTGTGTGTTTCTTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGT-GACCTTATGT---ATT----TTATATCATATCACAGCCAT-TTTGACGAGTTTGGGTAAAGAAATGTCAA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA-----------------------------------------------------CAG--TATACAGAAAGCCATCAAAGCGGTGGTTGATGTGTTGC---AAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT-GCCTGT---TGCACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:8985248-8985347 + | TCTA-CCT--------------------------------CTGCTG------------TCTATTAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GACAGCCAGC-CT |
| D_simulans | chrX_random:2632466-2632565 + | TCTG-CCT--------------------------------CTGCTG------------TCTATCAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GGCAGCCAGC-CT |
| D_yakuba | chrX:12330556-12330651 - | CTTA-CCC--------------------------------CTGCTG------------TCTAGTAACGCGTCAAAATGACTGTGAGCTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGCTG-GCCAGTC-----T |
| D_eugracilis | scf7180000409631:397666-397764 + | CTTA-CCT--------------------------------TTGCTG------------TCTATTAACGCGTTAAAATGACTGTGAGCTA--TGTTG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGTTG-GGCAGGCA-C-AT |
| D_elegans | scf7180000491006:2500520-2500618 + | TCTG-CTA--------------------------------CTGCTG------------TCTATTAACGCGTCAAAATGACTGTGAACTA--TGTGG----ATTTG-ACTTCATATCACAGCCAT-TTTGACGAGTTTGGTG-GGCAGGCA-C-AT |
| D_ananassae | scaffold_13047:797460-797571 + | TGTC-CCG--------------------------------CTTCTGCTTCATTACCTGTTTCCCAGCGCGTCGAAATGACTGTGACTTA--TGCGT----ATTTG-ATGTCATATCACAGCCAT-TTTGACGAGTTTGGTG-GACAGTGAAA-GT |
| D_pseudoobscura | chrXL_group1e:7000785-7000885 - | GCTA-CTG--------------------------------CTGCTG------------CACATTTACGCGTCAAAATGACTGTGAGCTA--TGTGT----TTTTG-ATCTCATATCACAGCCAT-TTTGACGAGTTTGATG-TGCAGTCCCACTC |
| D_persimilis | super_13:1553253-1553353 + | GCTA-CTG--------------------------------CTGCTG------------CACATTTACGCGTCAAAATGACTGTGAGCTA--TGTGT----TTTTG-ATCTCATATCACAGCCAT-TTTGACGAGTTTGATG-TGCAGTCCCACTC |
| D_willistoni | scaffold_180777:2053037-2053171 + | TCCCCCAATGTACCTACCCCTGCAACTGCTGTGCTTACAACTGATG------------TCCATGGTCGCGTCAAAATGACTGTGAGCTA--TGTTAACCGGTCAGAAATTCATATCACAGCCAT-TTTGACGAGTTCGATG-GGCATAC----GA |
| D_virilis | scaffold_12970:9304312-9304422 + | TCTC-TCG-----------------------CTGCTGCCAATGCTC------------CATATTGGCGCGTCAAAATGACTGTGAGCTA--TGTTGTTGCATTTGCCATTCATATCACAGCCAT-TTTGACGAGTTTGATGTGGCAGCCA----- |
| D_grimshawi | scaffold_15203:306998-307104 + | TC-----G-----------------------TTGCTATCAGTGCTC------------CATATTGGCGCGTCAAATTGACTGTGAGCTA--TGTTGTTGCAGTTGTAATTCATATCACAGCCAT-TTTGACGAGTTTGATGTGGCAGCCA----- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAA-CAG------------------------------------TA------------TACAGAAAGCCATCAAAGCGGTGGT---TGATGTGTTGCAAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCTGCCTGTTGCACT-----GT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:9216892-9217021 - | CT--GGGCTGA-CCCG--A-----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCACTT---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAA-T------ACCCA-TT |
| D_simulans | chr2R:7673827-7673955 - | CT--GGGCTGA-CCCG--A-----G----GGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTT---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAA-T------CCCCA-TT |
| D_yakuba | chr2R:7742247-7742374 + | CT--GGGCTGA-CCCG--A-----G----TGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATT----GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-CAA-T------CCCCA-TT |
| D_eugracilis | scf7180000409663:1025828-1025957 - | GT--AGGCTGATCCCA--A-----G----GATTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAG-AAA-T------CCCCA-TG |
| D_elegans | scf7180000491282:440692-440819 - | CT--TGGCTGA-CCTC--A-----G----GGTTGGTCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGCATTA---TGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCATGTCATCAAT-AGG-T------CT--ATAT |
| D_ananassae | scaffold_13266:16524568-16524693 - | CCCAGTGCC------GGCGA---------GTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAA---TGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGG-TTG-T------C--CA-TC |
| D_pseudoobscura | chr3:696696-696816 + | G----GGTCGG-CCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA---------------------- |
| D_persimilis | super_2:863138-863258 + | G----GGTCGG-CCCGGGGACTCCG----GGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATTA---AAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA---------------------- |
| D_willistoni | scaffold_181009:2073162-2073280 - | AC--G---------CGAAGAGTCAGTTAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAT---CTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA---------------------- |
| D_virilis | scaffold_12875:243286-243412 + | TT--GGGCT----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCC------GTGTGCATAT---CTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAACTAAGTGCAGCAACT-ATTT |
| D_grimshawi | scaffold_15245:10719551-10719668 - | CC--AGCCTGC-ATAT--G-----G----TTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCC------GTGTGGATAA---CTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA-------------------- |
| Mus_musculus | mmu-mir-184:1-69 + | CC---------------------------------------------TTTCCTTATCACTTTTCCAGCCA-GCTTTG------TGACTCT--AAGTGTTGGACGGAGAACTGATAAGGGTAGG-------------------------------------- |
| Rattus_norvegicus | rno-mir-184:1-77 + | C-------------------------------------------ACTTTCCCTTATCAGTTTTCCAGCCA-GCTTTG------TGACTGT--AAATGTTGGACGGAGAACTGATAAGGGTAAGTGACTG-------------------------------- |
| Macaca_mulatta | mml-mir-184:1-84 + | TC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCC------AGCTTTATGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Pongo_pygmaeus | ppy-mir-184:1-84 + | CC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCCAGCTTTG------TGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Homo_sapiens | hsa-mir-184:1-84 + | CC--AGTC------------------------------------ACGTCCCCTTATCACTTTTCCAGCCCAGCTTTG------TGACTGT--AAGTGTTGGACGGAGAACTGATAAGGGTAGGTGA-------------------------------TTGA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:8564884-8565013 + | ACTT------------------------------------------GCC---------------------------CTTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------- |
| D_simulans | chr3L:8005898-8006027 + | ACTT------------------------------------------GCC---------------------------CTTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTATCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------- |
| D_yakuba | chr3L:3348658-3348787 - | ACTA------------------------------------------GCC---------------------------CTTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------- |
| D_eugracilis | scf7180000409524:96530-96659 - | ACTA------------------------------------------GTC---------------------------CCTCAAAAC-GAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAAAA------- |
| D_elegans | scf7180000491268:124838-124968 - | ACTA------------------------------------------GTC---------------------------CTTCAAAAC-CAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTTCATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACCC-------------------TCGCCAATCTACTAAAACA------A |
| D_ananassae | scaffold_13337:8074872-8075002 - | ACTC------------------------------------------GCC---------------------------TCTCCAAACACAACTAA-----------TTGATGGTTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GACTC-------------------TCGCCAATCTACTAAAATA------- |
| D_pseudoobscura | chrXR_group3a:147689-147845 - | ACTA------------------------------------------GTTAACCCTAACTCTCATCTGCCCACAAACCAACCCAAC-GAACTAA-----------TTGGGGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAGAGTTCACCCAGGAATCAAACATATTATTACTGT---GATAC-------------------CCGGAAATCTACTAAACCC------- |
| D_persimilis | super_23:151050-151206 - | ACTA------------------------------------------GTTAACCCTAACTCTCATCTGCCCACAAACCAACCCAAC-GAACTAA-----------TTGGGGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAGAGTTCACCCAGGAATCAAACATATTATTACTGT---GATAC-------------------CCGGAAATCTACTAAACCC------- |
| D_willistoni | scaffold_180949:5214317-5214457 + | ACTT------------------------------------------GCC--------CTCTCATCTGCCCACA-------AAAAC-GAACTAA-----------TTGATGGTCCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GATCG-------------------TCGG-AATCTACTAAAAAC------- |
| D_virilis | scaffold_13049:6215347-6215479 + | ACC-----------------------------------------------------------------------------AAATC-AAACTACCCCCCACTCATCTAATGATTCCAGTAAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GATTG-------------------TTGAAACTCTACTAAACCA------- |
| D_grimshawi | scaffold_15072:36258-36427 + | ACTACCAATAAAATAAAAATCCAACCAATCAACCAACCAACCAACTACC--------CACTCAT----------------------------------------CTAATGATTCCAGTGAGATATGTTTGATATTCTTGGTTGTTACATTCAAAAGTTCACCCAGGAATCAAACATATTATTACTGT---GATTG-------------------TTGAAACTCTACTAAAAACAAATCAA |
| Mus_musculus_1 | mmu-mir-190b:1-80 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTAAATTATG--AACCAACTGAATGTCAAGCATACTCTCACAGC---AGTA---------------------AG----------------------- |
| Mus_musculus_2 | mmu-mir-190a:1-67 + | ------------------------------------------------------------------------------------------------------------------CTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAGCATATTCCTACAG------------------------------------------------------ |
| Rattus_norvegicus_1 | rno-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAGCATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Rattus_norvegicus_2 | rno-mir-190b:1-78 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TAGGTTGTTAAATTATG--AACCAACTAAATGTCAAACATT--CTCACAGCAGTGAG----------------------------------------------- |
| Macaca_mulatta_1 | mml-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Macaca_mulatta_2 | mml-mir-190b:1-79 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCTG--------------------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Pongo_pygmaeus_1 | ppy-mir-190b:1-79 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCAG--------------------------------------------- |
| Gorilla_gorilla_2 | ggo-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Gorilla_gorilla_1 | ggo-mir-190b:1-112 + | CTC-----------------------------------------------------------TC----------------------------------------CTGCCTGCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCAGGTGATTCAGCACCACCCTCTTT---------------C------- |
| Homo_sapiens_1 | hsa-mir-190b:1-79 + | ---------------------------------------------------------------------------------------------------------T----GCTTCTGTGTGATATGTTTGATAT--TGGGTTGTTTAATTAGG--AACCAACTAAATGTCAAACATATTCTTACAGC---AGCAG--------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-190a:1-85 + | ---------------------------------------------------------------------------------------------------------TGCAGGCCTCTGTGTGATATGTTTGATATATTAGGTTGTTATTT-----AATCCAACTATATATCAAACATATTCCTACAGT---GTC---------------------TTGCC--------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:21567099-21567236 + | T-TTGATC-------------------GCAATC---CGTGTGTGCCCTTATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCATATTTAT--A-AATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGGT------T----------CG----------------------AC----- |
| D_simulans | chr3L:20903305-20903442 + | T-TCGATC-------------------GCAATC---CGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCATATTTAT--A-AATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGGT------T----------CG----------------------AC----- |
| D_yakuba | chr3L:18945598-18945735 - | T-TTGATC-------------------GGAATC---CGTGAGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCATATTTAT--A-AATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGGT------T----------CG----------------------AC----- |
| D_eugracilis | scf7180000409472:386343-386481 + | C-TTATTC-------------------GAAATC---CGCGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCATATTTAT--A-AATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGGT------T---------ACG----------------------AT----- |
| D_elegans | scf7180000491255:2722765-2722902 - | TCTTGTTA-------------------GAAATA---C--GTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATTTCGCCATATTTAT--A-AATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGGT------T---------ACG----------------------AT----- |
| D_ananassae | scaffold_13337:17070826-17070956 - | C-CGAATC-------------------GAAATC---TGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATTGCCATATTCAT--A-AATTCTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTA-------------------------------------------------- |
| D_pseudoobscura | chrXR_group6:2746028-2746170 - | C-TCAATT-------------------GGAATA---TTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCGTATTAAT--A-AATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGGC------T----------TA----------------------ACAATAA |
| D_persimilis | super_9:1042494-1042636 - | C-TCAATT-------------------GGAATA---TTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCGTATTAAT--A-AATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGGC------T----------TA----------------------ACAATAA |
| D_willistoni | scaffold_180727:1082196-1082335 - | T-TTAATTA-A----------------TCAATC---TGTGTGTGCGCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACA-AGTCAAAAA--TTTATTATCATCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGAC----------------GAA----------------------AT----- |
| D_virilis | scaffold_13049:17910638-17910773 + | C-TTAATG-------------------GTTGTA---AGCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATATATATATGTAT-CGT--A-AATCTTCTACTGGCCTACTAAGTCTCAATATAATGGGAGTAAAAACCTCAG-T----------------ATA----------------------AC----- |
| D_grimshawi | scaffold_10030:24062-24212 - | T-ATAACTATCGAGGAAATTTACATAAATGTGCTAAAGCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATAAAGACCTTTA-TCGT--A-AATCTTCTACTGGCCTACTAAGTCCCAATATAATGGGAGTAAAACCCTCA--------------------------------------------------- |
| Mus_musculus_1 | mmu-mir-193b:1-79 + | G-G-----------------------------C---C--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTT--TGTGTTTTATCCAACTGGCCCACAAAGTCCCGCTTTT----------------GG-G-----------------GTC-----------------------A----- |
| Mus_musculus_2 | mmu-mir-193a:1-66 + | G---------------------------------------------------AGAGCTGGGTCTTTGCGGGCAAGAT-----------------GAGAG--TGT---CAGTTCAACTGGCCTACAAAGTCCCAGTCCT----------------C---------------------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-3549:1-112 + | G-AAAATG-----------CCGGTCCTGGGAGC---C--------------GAGGACTGGGACTTTGTAGGCCAGTT-----------------GAACT--GAC---ACCCTCATCTTGCCCGCAAAGACCCAGCTCT----------------CA-GCTCCCGTCCGCCTTGGAGTT----------------------CG----- |
| Rattus_norvegicus_2 | rno-mir-193:1-86 + | G-CGGAC--------------------GGGAGC---T--------------GAGAGCTGGGTCTTTGCGGGCAAGAT-----------------GAGGG--TGT---CAGTTCAACTGGCCTACAAAGTCCCAGTCCT----------------CG-GCT----------------CC-----------------------C----- |
| Macaca_mulatta_1 | mml-mir-193b:1-83 + | G-TGG--------------------------TC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTT--TATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTT----------------GG-G-----------------GTC----------------------AT----- |
| Macaca_mulatta_2 | mml-mir-193a:1-85 + | G-G---AT-------------------GGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAGGG--TGT---CGGATCAACTGGCCTACAAAGTCCCAGTCCT----------------CG-GCC----------------CC----------------------CG----- |
| Pongo_pygmaeus_2 | ppy-mir-193a:1-88 + | C-GAGGAT-------------------GGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAAGG--TGT---CGGATCAACTGGCCTACAAAGTCCCAGTCCT----------------CG-GCC----------------CC----------------------CG----- |
| Pongo_pygmaeus_1 | ppy-mir-193b:1-83 + | G-TGG--------------------------TC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTT--TATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTT----------------GG-G-----------------GTC----------------------AT----- |
| Gorilla_gorilla_2 | ggo-mir-193b:1-112 + | G-GAGGTT-------------------GTGGTC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTT--TATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTT----------------GG-G-----------------GTCATTCTGGACAGCGAGGGACTCAGG----- |
| Gorilla_gorilla_1 | ggo-mir-193a:1-111 + | G-ACGCACCCCG---AACTCCGAGGATGGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAGGG--TGT---CGAATCAACTGGCCTACAAAGTCCCAGTTCT----------------CG-GCCCCC---------GGGACC----------------------AG----- |
| Homo_sapiens_1 | hsa-mir-193b:1-83 + | G-TGG--------------------------TC---T--------------CAGAATCGGGGTTTTGAGGGCGAGAT-----------------GAGTT--TATGTTTTATCCAACTGGCCCTCAAAGTCCCGCTTTT----------------GG-G-----------------GTC----------------------AT----- |
| Homo_sapiens_2 | hsa-mir-193a:1-88 + | C-GAGGAT-------------------GGGAGC---T--------------GAGGGCTGGGTCTTTGCGGGCGAGAT-----------------GAGGG--TGT---CGGATCAACTGGCCTACAAAGTCCCAGTTCT----------------CG-GCC----------------CC----------------------CG----- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:18022237-18022366 + | CCACGT----CCGGAAC-----CGAAAGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------------------------------------------------------------------------------------CCAGCCATTGTTCCATC |
| D_simulans | chrX_random:4635946-4636075 + | CCACGT----CCGGAAC-----CGAAAGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAG-------------------------------------------------------------------------------------CCAGCCATTGTTCCATC |
| D_yakuba | chrX:16646312-16646441 + | CCATGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAA-------------------------------------------------------------------------------------CCAGCCATCGTCCCATA |
| D_eugracilis | scf7180000408176:660268-660428 - | CTGCGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGA------------------ATAGA----AC--CAAAAACGAGAACCAGCA-GC-----------------C-A-A----------CCAATCATCATCCAATA |
| D_elegans | scf7180000491193:230657-230827 + | CTGCGT----CGCGAAC-----CGAAAGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACAGATTAACCAGCACCACAAGCACCAA--AAGCACCAAA--AGC--AGCAG--------------------------------------CAGCCATCATCCAATA |
| D_ananassae | scaffold_13335:1603991-1604112 - | GCGTT-------------------AACGGTGCTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATAGAAGCAACCAA---------------------------------------------------------------------TCA-A----------CTGACCACCAG---ATC |
| D_pseudoobscura | chrXL_group3a:1970441-1970623 - | ATATGT----GA-TT--TAGCTCGATCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--TTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA------------------ACTAAACAAAC--CAAAAAGGA--AGTTGAACGCCTAATGCAATCGATGAGT-G-TTG-GGTTGCTTCAGTTT---------C |
| D_persimilis | super_11:2708510-2708698 + | ATATGT----GA-TT--TAGCTCGATCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--TTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCATATTAGCATCAAA------------------ACTAAACAAAC--AAAAAAGGA--AGTTGAACGCCTAATGCAATCGATGAGT-G-TTG-GGTTGCTTCAGTT-TCATTCC--A |
| D_willistoni | scaffold_181096:12033222-12033334 + | CAATCG----CAAAAGC-----ATAACGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTT--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGGCCAGAAAACGACCAG------------------------------------------------------------------------------------------------------ |
| D_virilis | scaffold_12928:1257190-1257317 - | TATATT----T---AAA-----CGAGCGGTACTTATTG-CAGCTGCTGG-CCACTGCACAAGATTAGA--CTC--AAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGACCAGAGAAACAGCGAA---------------------------------------------------------------------T-A-T----------TTAACTATTTTTC---C |
| D_grimshawi | scaffold_15203:8453543-8453644 + | ---------------------------GGAGCTTATTG-GAGCTGCTGG-CCACTGCACAAGATTAGA--TTCAAAAGACT-C-T-TGTG-CGTGTGACAGCGGCTATTGTAAGAGACCAGATAA----CAT-------------------------------------------------------------------------------------CAAGCCAT--------- |
| Mus_musculus | mmu-mir-210:1-110 + | CCGGGG----CA-GT--C-C--CTCCAGG--CTCAGGA-CAGCCACTGC-CCACCGCACACTGCGTTG--CTC--CGGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-CCCTG-GGCAGCGC--GAAC---------C |
| Rattus_norvegicus | rno-mir-210:1-110 + | CCGGGG----CA-GT--C-C--CTCCAGG--CTCAGGA-CAGCCACTGC-CCACAGCACACTGCGTTG--CTC--CGGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-CCCTG-GGCAGCGC--GAAC---------C |
| Macaca_mulatta | mml-mir-210:1-110 + | ACCCGG----CA-GT--C-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GACC---------C |
| Pongo_pygmaeus | ppy-mir-210:1-120 + | ACCCGG---GCA-GT--CTC--CTCCAGG--CGCAGGGCCAGCCCCTGCCCCACCGCACACTGCGCTGCCCCC--AAGACCACACGTGTGCCGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTGAGGCAGCGC--GACC---------C |
| Gorilla_gorilla | ggo-mir-210:1-111 + | GCCCACCCGGCA-GT--C-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GA------------ |
| Homo_sapiens | hsa-mir-210:1-110 + | ACCCGG----CA-GT--G-C--CTCCAGG--CGCAGGG-CAGCCCCTGC-CCACCGCACACTGCGCTG--CCC--CAGACC-CAC-TGTG-CGTGTGACAGCGGCTGATCTG------------------------------------------------------------------------------------------T-GCCTG-GGCAGCGC--GACC---------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:17308091-17308220 + | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAACCAAATCA |
| D_simulans | chr3L:16646167-16646296 + | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAACCAAATCA |
| D_yakuba | chr3L:16762572-16762701 - | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAACCAAATCA |
| D_eugracilis | scf7180000409711:25996-26125 - | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------GGCAGCCAAATCA |
| D_elegans | scf7180000490993:219049-219178 + | AAATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATTCAATATTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATAAGAATACAACTC---------AGCAACCAATTCA |
| D_ananassae | scaffold_13337:8265335-8265463 + | CAAA--ATATTTTGGTTAATTCAATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------ATTCAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATACGAATACAACGA---------AGAGAACCATTTC |
| D_pseudoobscura | chrXR_group6:9338098-9338227 - | ATCAAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATCCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCC---------AGCAACCAAAATC |
| D_persimilis | super_35:387455-387584 + | ATCAAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TATCCAATACTCAAGGGTTGTGACTGGACATCGCGGCTCGAAATAAGAATACAACCC---------ATCAACCAAAATC |
| D_willistoni | scaffold_180955:2086476-2086593 + | AA---AATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TTTCAAATACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATAAGAATACA------------------CCCAATAA |
| D_virilis | scaffold_13049:5991414-5991542 - | GTATAAATA-TTTGGTTAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TTTCAAATACTCAAGGGTTGCGACTGGGCATCGCGGCTCGAAATGAGAATCCAACCC---------A-CAACCAAACAA |
| D_grimshawi | scaffold_15110:13121815-13121944 + | TAACAAACA-TTTGGTGAATTCGATTTTTAGC-TATGATTGTCCAAACGCAATTCTTGTTGA---------TTTCAAAAACTCAAGGGTTGCATCTGGGCATCGCGGCTCGAAATGAGAATACAACAC---------AAAAATCAAAACA |
| Mus_musculus_1 | mmu-mir-219-1:1-110 + | CCGT---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTCTGGCT----CCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGGGG--------G |
| Mus_musculus_2 | mmu-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGTTGAGCTCCGGG------------------------------ |
| Rattus_norvegicus_1 | rno-mir-219-2:1-96 + | ACTC-----------------AGGGGCTTCACCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGTTGAGCTCCGG------------------------------- |
| Rattus_norvegicus_2 | rno-mir-219-1:1-110 + | CTGT---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTCTGGCT----CCGGCCGAGAGTTGCGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGGGG--------G |
| Macaca_mulatta_1 | mml-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGG------------------------------G |
| Macaca_mulatta_2 | mml-mir-219-1:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCT----CTGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGGGG--------G |
| Pongo_pygmaeus_2 | ppy-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGG------------------------------G |
| Pongo_pygmaeus_1 | ppy-mir-219-1:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCC----CCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGCGG--------G |
| Gorilla_gorilla | ggo-mir-219:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCT----CCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGCGG--------G |
| Homo_sapiens_1 | hsa-mir-219-1:1-110 + | CCGC---------------CCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCG----AGTCTATGGCT----CCGGCCGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCC--------CC-CAAACCTCGAGCGG--------G |
| Homo_sapiens_2 | hsa-mir-219-2:1-97 + | ACTC-----------------AGGGGCTTCGCCACTGATTGTCCAAACGCAATTCTTGTACGAGTCTGCGG------CCAACCGAGAATTGTGGCTGGACATCTGTGGCTGAGCTCCGG------------------------------G |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:9289926-9290048 - | GTG-------TGCCGCCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_simulans | chr3R_random:533427-533549 - | GTG-------TGCCGTCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_yakuba | chr3R:13598006-13598135 - | GTGCTAGATGTACGATGTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAA------------AAGAA |
| D_eugracilis | scf7180000409802:705185-705307 + | ATA-------TCGTGTCTACTTA------------------------------------------------C---CAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTGCAACAA------------AGAAA |
| D_elegans | scf7180000491047:1912675-1912796 + | GTG-------TATCAGTTACTTA------------------------------------------------C---CAAGTGCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAACAT------------T-GAA |
| D_ananassae | scaffold_13340:1848657-1848824 - | GAG-------T-------ACTTAGCCCCAACCATTGGTAAATATTGATTTTATACTTACATTA-CTTCCTGC---GAAG-TCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGCAA------AATACAAGGAA |
| D_pseudoobscura | chr2:16736618-16736739 - | T-A-------TCTTGTGCATTTT------------------------------------------------G---GCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAG------------TGAAA |
| D_persimilis | super_0:3659179-3659300 + | T-A-------TCTTGTGCATTTT------------------------------------------------G---GCGGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAACAG------------TGAAA |
| D_willistoni | scaffold_181130:6363211-6363342 - | GAT-------GGATCAATACTTA-----------------------------------CTTGAA-------CGAAGCGTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTT------------GGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGACTTTACCTACTT------------AAAAA |
| D_virilis | scaffold_12855:2861518-2861626 + | T--------------------------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTAGTTTTCCACCAGCAACAAT-T---AGAAA |
| D_grimshawi | scaffold_14906:3807816-3807948 - | TTG-------TGGCACTTACTT---------------------------------------GAGCTT-----GATGCGTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTA------------GGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGAATTTTCCAACAA------TGT---GCGAG |
| Caenorhabditis_elegans | cel-mir-252:1-98 + | TCC-------AGGGGTCTCTT-------------------------------------------------------------TCAGTTATAAGTAGTAGTGCCGCAGGTAACCGCCAGTCT----AAAAGGCTTACCTACTGCCTTC-----------TGCTT---AAAATTG---------AAATAT------------TGATG |
| Caenorhabditis_briggsae | cbr-mir-252:1-99 + | AGG-------TCTCTCC------------------------------------------------------------------CAGTTATAAGTAGTAGTGCCGCAGGTAACCGCT--TCCAGAAAATTGGTTTACCTACTGCCTTCTGCTT--------------AGAATTGGGATTTTGATGACC-----------------G |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:8057863-8057982 - | AATCGAATCC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAA--C-TA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTGTGAG |
| D_simulans | chr2R_random:2148092-2148211 - | AATCGAATCC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAA--G-CA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTGTGAG |
| D_yakuba | chr2R:8893333-8893452 + | AATCGAATCC-------ATATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAT--T-CA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTATGAG |
| D_eugracilis | scf7180000409462:405753-405864 + | AA---AATTC-------AAATGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAAATT--C-AA----TTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGCT----- |
| D_elegans | scf7180000491214:3592952-3593071 - | AATCCAAATCAAAATCTGAATGCGAATACGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAAGAA--TCCA----TTAA---ACACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGCTGCGCT----- |
| D_ananassae | scaffold_13266:2568740-2568853 + | CT---ATCTC-------GAATGCGAATACGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGATA--C-C-----TATA---ACACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGCTTCGCTCCGAT |
| D_pseudoobscura | chr3:418413-418523 - | AA---AACAC-------GAATGCGAATAGGT--GAATAAAGAGAGCTGTCCGTCGACAGTCAACGTA--CCAA----TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGC----AG |
| D_persimilis | super_2:605310-605420 - | AA---AACAC-------GAATGCGAATAGGT--GAATAAAGAGAGCTGTCCGTCGACAGTCAACGTA--CCAA----TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGTTGCGC----AG |
| D_willistoni | scaffold_181141:3241875-3241979 + | AG---AA-----------AAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTTAAAC-GAT---TTTA---AAACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTGA--------C |
| D_virilis | scaffold_12875:19829913-19830024 + | AATCGTACCC-------AAAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTAA--C-AAA---TGTA---ATACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTTGCCC------ |
| D_grimshawi | scaffold_15245:18178188-18178294 + | AAT---TATG-------AAAAGCGAATAAGT--GAATAAAGAGAGCTGTCCGTCGACAGTCCAGTAT--A-AAT---TTTA---ATACTGTCATGGAATTGCTCTCTTTGTATGATATTCGACGTTGC-------- |
| Caenorhabditis_elegans_1 | cel-mir-46:1-97 + | CT---GA---------------------GGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCAAGACCAC-GAGTCGTTGT---GTGCTGTCATGGAGTCGCTCTCTTCAGATGATC--CGGTC---------AAT |
| Caenorhabditis_elegans_2 | cel-mir-47:1-97 + | GA---GAGCC-------GACTG--------A--AACTGAAGAGAGCAGTCTATTGACAGTCGGT-TACTC-GAA---ATCT---TTACTGTCATGGAGGCGCTCTCTTCAGATGATGTCTGGCCC----------- |
| Caenorhabditis_briggsae_2 | cbr-mir-47:1-93 + | TA---GCTGA-------GG----------AA--GACTGAAGGGAGCTTTCTTTTGACAGTTCGATTT--C-GAA-------CTCTTACTGTCATGGAGGCGCTCTCTTCAGGTGAACTCTGGCTC----------- |
| Caenorhabditis_briggsae_1 | cbr-mir-46:1-94 + | GA---GATAC-------AA----------GTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCGCTT------G----TTTCAT-GTGCTGTCATGGAGTCGCTCTCTTCAGATGATCTGAATCTA----------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:8057643-8057764 - | CTTTCA----GATCCTCCGCGAATTGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AGACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-AT |
| D_simulans | zdp42d09.g1:294-416 + | CTTTCA----GATCCTCCGCGAATTGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AGACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-AT |
| D_yakuba | chr2R:8893539-8893660 + | CTTTCA----GATCCCCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----ATACCA---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAGGCGACGA--TT-AG |
| D_eugracilis | scf7180000409462:405955-406077 + | GTTCCA----GATCCTCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTGA----ATACTG---ATTATAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TG-AT |
| D_elegans | scf7180000491214:3592750-3592874 - | ATCCCA-AAGGACTTCCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----AAACTG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--TT-TC |
| D_ananassae | scaffold_13266:2568922-2569043 + | CCGCAA---GGATACTCCACGAATAGTGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTAA-A--ACACGG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGA--T---- |
| D_pseudoobscura | chr3:418209-418322 - | TAT-------AATACTGAACGAATAGTGA-AATAAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----A-TCAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGA------- |
| D_persimilis | super_2:605106-605226 - | TTTTCTGTATAATACTGAACGAATAGTGA-AATAAAGAGAGCTATCCGTCGACAGTCA-AG-TTA-----A-TCAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGCCGA------- |
| D_willistoni | scaffold_181141:3242068-3242181 + | TC-----------------CGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCC-AG-TTTAATACATCCGA---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAATCGACGG--TT-TT |
| D_virilis | scaffold_12875:19830099-19830219 + | CTAACC----AAAC--TTGCGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-CTA------TACAG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGACTTT-AT |
| D_grimshawi | scaffold_15245:18178374-18178494 + | GTTTCA---CAACAAATTACGAATAGCGA-AATGAAGAGAGCTATCCGTCGACAGTCA-AG-TTAT----ATACCG---ATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCGAAAAGCGACGA--T---- |
| Caenorhabditis_elegans_1 | cel-mir-46:1-97 + | CTGA--------------------GGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTCAAGACCA--------CGAGTCGTTGT-GTGCTGTCATGGAGTCGCTCTCTTCAGATGAT--CCG----------G--TCAAT |
| Caenorhabditis_elegans_2 | cel-mir-47:1-97 + | GAGAGC-------------CG---ACTGAAACTGAAGAGAGCAGTCTATTGACAGTCG--G-TTA-----C-TCGA---AATCT-TTACTGTCATGGAGGCGCTCTCTTCAGATGATGTCTGG-------------C-CC |
| Caenorhabditis_briggsae_2 | cbr-mir-47:1-93 + | TAGCTG-A----------------GGAAG-ACTGAAGGGAGCTTTCTTTTGACAGTTC-GA-TTT--------CGA---AC--TCTTACTGTCATGGAGGCGCTCTCTTCAGGTGAACTCTGG-------------C-TC |
| Caenorhabditis_briggsae_1 | cbr-mir-46:1-94 + | GAGATA-------------CA---AGTGAAGCTGAAGAGAGCCGTCTATTGACAGTTC-GC-TTG--------------TTTCATGTGCTGTCATGGAGTCGCTCTCTTCAGATGATCTGA-----------A--TC-TA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:15401974-15402103 + | AG-----AGAAA------------AGTG----------------------T-CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCA-CCAT- |
| D_simulans | chrX_random:4022807-4022936 + | AG-----AGAAA------------AGTG----------------------T-CACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCA-CCAT- |
| D_yakuba | chrX:9587590-9587719 + | AG-----AGAAA------------AGTG----------------------T-CACCTTACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTGATCA-CCAT- |
| D_eugracilis | scf7180000409533:551298-551429 + | AG-----AGAAA------------AGTG----------------------TCCACCTCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGCCTAGATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCA-CCAAA |
| D_elegans | scf7180000491023:1180304-1180433 - | GG-----AGAAA------------AGTG----------------------T-CACATCACACGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAGTCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCAA- |
| D_ananassae | scaffold_12929:2900376-2900509 - | GT-----GTTACAGT--GTTCA--------------------C---------CACCTCACCTGATTCTTAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTGATTAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTCGAATTGCATTTTATCA-CCAA- |
| D_pseudoobscura | chrXL_group1a:976013-976147 + | AG-----AGAA-AGCGAC------------------------GTCACGATT-CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAG-CAAGATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCA-- |
| D_persimilis | super_26:1090677-1090833 + | AGAG-CG-----AACGAG--AGAGAGTGCCAGAGAAAGCGACGTCACGATT-CACCTCA--CGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTAAG-CAAGATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCA-- |
| D_willistoni | scaffold_180702:1594772-1594907 - | GAGT-GC----GAGTGGG--AG--------------------G-------G-AGCCTAACG-AATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCTATGCCTAGATAT---------------------TT----------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTAATCA-CCAA- |
| D_virilis | scaffold_12970:2047646-2047770 + | ACAA-GA-----T--------------G----------------------T-CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCCTAAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CC--- |
| D_grimshawi | scaffold_14853:6953507-6953633 - | AGAATGA-----C--------------G----------------------T-CACCTCACCCGATTCTCAAAGGTAAATATCAGCTGGTAATTCTGGGAGCAATGCC-AAATAT---------------------------------GAAACACTCGGAATTTCAGTTGGTATCGACTTTTTTGAATTGCATTTTATCA-CCA-- |
| Mus_musculus_1 | mmu-mir-216a:1-72 + | TT---------------------------------------------------------------------GGTTTAATCTCAGCTGGCAACTGTGAGATGTCCC-----------TATCATTCCTCACAGTGGTCTCTGGGATTATGCTAA----------------------------------------------------- |
| Mus_musculus_2 | mmu-mir-216b:1-86 + | TT-----GGCAG---------------------------------------------------------ACTGGGAAATCTCTGCAGGCAAATGTGAT--GTCACTGAAGAAACCACACACTTACCTGTAGAGATTC-------------------------------------------T-TCAGTCTGAC---------AA-- |
| Rattus_norvegicus_1 | rno-mir-216a:1-106 + | GTTA-GC-----TATGAG------------------------T---------------------------TAGTTTAATCTCAGCTGGCAACTGTGAGATGTCCC-----------TATCATTCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TTGACCTC--------------- |
| Rattus_norvegicus_2 | rno-mir-216b:1-102 + | TGCACGT-----TGGCA---------------------------------------------------GACTGGGAAATCTCTGCAGGCAAATGTGA--TGTCACTGAAGAAATCACACACTTACTTGTAGAGATTC--------------------------------------------TTCAGTCTGACAACATCAAGCAT- |
| Macaca_mulatta_1 | mml-mir-216b:1-82 + | GC-----AGA------------------------------------------------------------CTGGAAAATCTCTGCAGGCAAATGTGA--TGTCACTGAAGAAATCACACACTTACCCGTAGAGATTC---------------------------------T-----------ACAGTCTGACA------------ |
| Macaca_mulatta_2 | mml-mir-216a:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTACGCTAAACAGAGCAATT---------------TCC-TTGCCCTCGC---------GA-- |
| Pongo_pygmaeus_2 | ppy-mir-216a:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TTGCCCTCAC---------GA-- |
| Pongo_pygmaeus_1 | ppy-mir-216b:1-82 + | GC-----AGA------------------------------------------------------------CTGGAAAATCTCTGCAGGCAAATGTGA--TGTCACTGAAGAAATCACACACTTACCCGTAGAGATTC---------------------------------T-----------ACAGTCTGACA------------ |
| Gorilla_gorilla | ggo-mir-216:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TAGCCCTCAC---------GA-- |
| Homo_sapiens_1 | hsa-mir-216a:1-110 + | GATG-GC-----TGTGAG------------------------T---------------------------TGGCTTAATCTCAGCTGGCAACTGTGAGATGTT-----------CATACAATCCCTCACAGTGGTCTCTGGGATTATGCTAAACAGAGCAATT---------------TCC-TAGCCCTCAC---------GA-- |
| Homo_sapiens_2 | hsa-mir-216b:1-82 + | GC-----AGA------------------------------------------------------------CTGGAAAATCTCTGCAGGCAAATGTGA--TGTCACTGAGGAAATCACACACTTACCCGTAGAGATTC---------------------------------T-----------ACAGTCTGACA------------ |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:11939178-11939306 - | ACTTGCCCT----------------GCCACTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AGGAGAACCCACTCAA---------TTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- |
| D_simulans | chr3L:11307954-11308082 - | ACTTGCCCA----------------GCCACTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AGGAAAACCCACTCAA---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- |
| D_yakuba | chr3L:11984774-11984902 - | TCTTGCCCT----------------ACCACTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGACAACCCACTCAA---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC- |
| D_eugracilis | scf7180000409466:4030533-4030653 - | TCAC--------------------------TTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGGAAACATACTCAT---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCCT |
| D_elegans | scf7180000491193:3850551-3850671 - | CTTC--------------------------TTCGAATCGAAGAA-CTGAGCTCGATTGGTG-CATAGATATC--------AAGGGAACCCGCTCAT---------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTCT |
| D_ananassae | scaffold_13337:6191341-6191461 - | GCCA----G----------------GATAATTCGAATCAAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGGAGATCCGATCAT---------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA------ |
| D_pseudoobscura | chrXR_group6:1929779-1929903 - | TCTTACAAT----------------TACAGTTCGAATCGAAGAA-CTGAGATCGATTGGTG-CATAGATATC--------AAGAGGACTCGCTAATT--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA------ |
| D_persimilis | gnl|ti|738578230:636-763 + | TCTTACAAT-------------T--TACAGTGGGAATCGAAGAACCTGAGATCGATTGGTG-CATAGATATC--------AAGAGGACTCGATAATT--------TTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGA------ |
| D_willistoni | scaffold_180949:5768880-5769006 + | ACAA----------------------ATTGTTCGAATTAAAGAA-CTGAGATCGATTGGTG-CATAGATAAT--------ATGCGAATTCTATCATTTGATTTCATTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATTAGAACCAATCAACAAG------ |
| D_virilis | scaffold_13049:21101427-21101556 + | ATGCAC-----------------CAGCCAGTTCAAATTGAAGAA-CTGAGATCGATTGGTG-CATAGATATC----GC--CCAAAAAGTAATTCAT---------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTCGAACCGATCAGCGGCGCATC- |
| D_grimshawi | scaffold_15110:22570097-22570226 - | ATGTAG-----------------CAGCCAGTTCAAATTGAAGAA-CTGAGATCGATTGGTG-CATAGATATC----GTCCAAG--AATAATTTA-AT--------TTCAATTCTAGCACCATTCGAAATCAGTGCTTTGTATTGGAACCGATCAGCGGCGCATT- |
| Mus_musculus_1 | mmu-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Mus_musculus_3 | mmu-mir-29b-1:1-71 + | AG--------------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCT--------------------------- |
| Mus_musculus_2 | mmu-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Mus_musculus_4 | mmu-mir-29a:1-88 + | ACCC-----------------CTT-----------AGAGGATGA-CTGATTTCTTTTGGTG-TTCAGAGTCA---------ATA---------------------GAATTTTCTAGCACCATCTGAAATCGGTTATAATGATTGGGGA----------------- |
| Rattus_norvegicus_1 | rno-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Rattus_norvegicus_4 | rno-mir-29a:1-88 + | ACCC-----------------CTT-----------AGAGGATGA-CTGATTTCTTTTGGTG-TTCAGAGTCA---------ATA---------------------GAATTTTCTAGCACCATCTGAAATCGGTTATAATGATTGGGGA----------------- |
| Rattus_norvegicus_2 | rno-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTTGGT----GG----------------- |
| Rattus_norvegicus_3 | rno-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Macaca_mulatta_1 | mml-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Macaca_mulatta_2 | mml-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Macaca_mulatta_3 | mml-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Macaca_mulatta_4 | mml-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Pongo_pygmaeus_4 | ppy-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Pongo_pygmaeus_2 | ppy-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Pongo_pygmaeus_3 | ppy-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Pongo_pygmaeus_1 | ppy-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Gorilla_gorilla_2 | ggo-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Gorilla_gorilla_3 | ggo-mir-29c:1-112 + | GGGAGCACCACTGGCCCATCTCTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGAAAAGCAG---------- |
| Gorilla_gorilla_4 | ggo-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Gorilla_gorilla_1 | ggo-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Homo_sapiens_1 | hsa-mir-29c:1-88 + | ATCT-----------------CTTAC---------ACAGGCTGA-CCGATTTCTCCTGGTG-TTCAGAGTCT----G----------------------------TTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGGA----------------- |
| Homo_sapiens_4 | hsa-mir-29b-1:1-81 + | CTTCAG----------------------------------GAA-GCTGGTTTCATATGGTGGTTTAGATTTAAATAG----------------------------TGATTGTCTAGCACCATTTGAAATCAGTGTTCTT----GGGGG----------------- |
| Homo_sapiens_3 | hsa-mir-29a:1-64 + | AT----------------------------------------GA-CTGATTTCTTTTGGTG-TTCAGAGTCA---A-------------------TA--------TAATTTTCTAGCACCATCTGAAATCGGTTAT----------------------------- |
| Homo_sapiens_2 | hsa-mir-29b-2:1-81 + | CTTCTG----------------------------------GAA-GCTGGTTTCACATGGTGGCTTAGATTTTTCCA-------------------TC--------TTTGTATCTAGCACCATTTGAAATCAGTGTTTT-----AGGAG----------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19569882-19569987 - | TATTGGC-GCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_simulans | chr2L:19257947-19258052 - | TATTGGC-GCATTCATGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_yakuba | chr2R:6066940-6067043 - | T--TGGC-GCATTCACGCTGGGCTCTCAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCGCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_eugracilis | scf7180000409752:567590-567697 - | TATTGGC-GCATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTTT--TCCGCCTTGCGAGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_elegans | scf7180000491046:3394697-3394802 + | TATTGGC-GCATTCCTGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT----CCGCTTTGCCCGGCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTATCGTACA |
| D_ananassae | scaffold_12916:12013650-12013754 + | TATTGGC-ACATTCCTGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT----CCATTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTTATGTATCGTACA |
| D_pseudoobscura | chr4_group5:1152486-1152589 + | TATTGGC-ACATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT-----TGCTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTCGGCGTAATGTATCGTACA |
| D_persimilis | super_5:5559971-5560074 + | TATTGGC-ACATTCATGCTGGGCTCACAAAGTGGTTGTGAAATGCATTT-----TGCTTTGCCC-GCATATCACAGCCAGCTTTGATGAGCTCGGCGTAATGTATCGTACA |
| D_willistoni | scaffold_180708:4284676-4284781 + | CA-CGAC-ACATTCATGCTGAGCTCACAAAGTGGTTGTGAAATGCATTAT---TTGCTTTATCCAGCATATCACAGCCAGCTTTGATGAGCTCTGCGTAATGTGAATTGCA |
| D_virilis | scaffold_12723:2960768-2960874 - | GATTGGC-ACATTCATGCTGCGCTCTCAAAGTGGTTGTGAAATGCATTTG--AAAGCTTTGCGC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTCACGTACA |
| D_grimshawi | scaffold_15126:521642-521748 + | T--TGGC-ACATTCATGCTGCGCTCTCAAAGTGGTTGTGAAATGCATTTTTGAAAGCTTTGCGC-GCATATCACAGCCAGCTTTGATGAGCTTAGCGTAATGTAAACTACt |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAA--ACAGTATACAG--AAAGCCATCAAAGCGGTGGTTG-ATGTGTTGC---AAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT--GCCTGTTGCACTGT--- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19569475-19569576 - | TGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_simulans | chr2L:19257527-19257628 - | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_yakuba | chr2R:6066549-6066650 - | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACA |
| D_eugracilis | scf7180000409752:567171-567272 - | CGC-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_elegans | scf7180000491046:3395094-3395195 + | CGT-ACGATGTTGATTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_ananassae | scaffold_12916:12013971-12014072 + | GGC-ACGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_pseudoobscura | chr4_group5:1153071-1153173 + | TATTATGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_persimilis | super_5:5560564-5560666 + | TATTATGATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAAACA |
| D_willistoni | scaffold_180708:4285049-4285146 + | ------GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_virilis | scaffold_12723:2960501-2960597 - | ------GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCGACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAAAACA |
| D_grimshawi | scaffold_15126:521944-522043 + | TTT---GATGTTGCTTATC-TAAGCCTCATCAA----GTGGTTGTGATATGGA------TACCCGACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGAGAACA |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAA-ACAGTATA-----CAGAAAGC--CATCAAAGCGGTGGTTGATGTGTTGCAAATTATGAC--TTTCATATCACAGCCAGCTTTGATGTGCTGC-CTGTTGCACTG-----T |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:8258601-8258707 - | CAAAA----TAAC-------TAAAAACTTCAACTGTCTTCAAAGTGGCAG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCT----------------------CGTCCGGC |
| D_simulans | chr2L:8042700-8042806 - | CAAAA----GAAC-------TGAAAACTTCAACTGTCTTCAAAGTGGCGG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCA----------------------CGCCCGAC |
| D_yakuba | chr2L:10894231-10894336 - | GGAAA----AAG--------TGAAAACTTCAACTGTCTTCAAAGTGGCGG-TGACATGTTGTCAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTTTTTCT----------------------CGCCAACC |
| D_eugracilis | scf7180000409461:268300-268413 - | AGAAGTGAAGGTGA---ATGTGAGAACTGCAACTGTCTTCAAGGTGGCGG-TGAAATGTTGTTAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTCTTTCTA----------------------ACTC-GA |
| D_elegans | scf7180000491338:639705-639825 + | TATAA----ATTAT---ATGTAAAAACTGCAACTGTCTTCAAGGTGGCGG-TGACATGTTGTTAACA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGTCTTTTTATCTCCTTGA------------AATCGGGC |
| D_ananassae | scaffold_12916:6006043-6006142 + | CAGAT----TTTT----TT-AGGGAACTGCGACCCTCCTTAAAGTGGCGG-TGACATGTAGCTTTC----A------TA-TTCATATCACAGCTTTGCTTTCAGGAGC-----GTTGAGGTTTCTC------------------------------- |
| D_pseudoobscura | chr4_group3:3919027-3919154 + | CCCAT----GGGATACTATAGGAAAGCTGCGACGCTCTTTAAAGTGGCGG-TGACGTGTTGGTAATA---A------TA-TTCATATCACAGCC-AGCTTTGAGGAGC-----GTTGCGGCCCTTCTG--------AAAATATGCGCCTCATTGGGG |
| D_persimilis | super_1:5401823-5401939 + | CCCAT----GGGATACTATAGGAATGCTGCGACGCTCTTTAAAGTGGCGG-TGACGTGTTGGTAATA---A------TA-TTCATATCACAGCC-AGCTTTGA-GAGC-----GTTGCGGCCCTTCTG--------AA-AT---------ATGCGCC |
| D_willistoni | scaffold_180703:495398-495497 + | TGTAA----ATTA-------TAGAATTTATGATAGATTTTTAATCATGGT-TTGAGTCAAAATTAA----ACAAAAATAGTTTAAATAAAAGCA-AAT-ATA-GTAAT-----ATTTTTGTT---------------------------------TT |
| D_virilis | Unknown | ------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| D_grimshawi | scaffold_15252:13434449-13434542 - | TTCAA----TAGC----AA-GGAAATTCTTGGTTTTCTTTTGTTTATCGG-GAAAATGTTATATAA----A------CC-TATATATCTTT----ATCTCT----------------AGATCTCTCA----------------------CTATTTGC |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAAC----AGTATA---C-AGAAA---------GCCATCAAAGCGGTGGTTGATGTGTTGCAAATTATGA------CT-TTCATATCACAGCC-AGCTTTGATGTGCTGCCTGTT----------------------------------GCACTGT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:19570167-19570279 - | ATCGAAA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_simulans | chr2L:19258228-19258340 - | ATCGAAA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_yakuba | chr2R:6067209-6067321 - | ATCGAAG-----------------------------------------CAAGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTCTGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGACAAAAA- |
| D_eugracilis | scf7180000409752:567897-568009 - | ATCGAAG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGGCAAAAA- |
| D_elegans | scf7180000491046:3394363-3394475 + | ATCGAAG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGAT-GCTCAAGACAAGAA- |
| D_ananassae | scaffold_12916:12013302-12013412 + | C----CA-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCAAT-GCTCAAGACAAAAAA |
| D_pseudoobscura | chr4_group5:1152145-1152298 + | ACCCAAAGAACCCAAAGCCTCGGGTCTCGGGGCCCCCGTGTCCGGGCCAAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAAGACAAAAG- |
| D_persimilis | super_5:5559630-5559783 + | ACCCAAAGAACCCAAAGCCTCGGGTCTCGGGGCCCCCGTGTCCGGGCCAAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAAGACAAAAG- |
| D_willistoni | scaffold_180708:4283205-4283312 + | ---GAGG-----------------------------------------CAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCAATGGCTCAAGTTA----- |
| D_virilis | scaffold_12723:2961084-2961203 - | AGCGAGAGA----------------------------------GAGAGAAAGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTACTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAGCACAAAAA- |
| D_grimshawi | scaffold_15126:521314-521426 + | GAGAGAG-----------------------------------------AGAGAGAATTGTGTCCTTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTACTCATATCACAGCCAGCTTTGAGGAGCGACACGAT-GCTCAACACAAAAA- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TA---AA-----------------------------------------C---AGTATACAGAAAGCCATCAAAGCGGTGGTTGA-TGTGTTGCAAATTATGACT-TTCATATCACAGCCAGCTTTGATGTGCTGCCTGTT-GCACTGT-------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:11243451-11243582 - | TGCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGAT-AGCAAA-A------------------------------------------TG--------------TGACC |
| D_simulans | chr3R:10237596-10237727 + | TGCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGAT-AGCAAA-G------------------------------------------TG--------------TGACC |
| D_yakuba | chr3R:15188346-15188476 + | TTCGT-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGTAA--G------------------------------------------TG--------------CGACC |
| D_eugracilis | scf7180000409281:109326-109438 + | TA--------------------TTCCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AAAAAGATATTTCTGCTTTT---GA--TTCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGCA------------------------------------------------------------------- |
| D_elegans | scf7180000491080:1007311-1007443 - | TGTGA-----------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTCTGCATTT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-AGCATTTT------------------------------------------TG--------------TGACC |
| D_ananassae | scaffold_13340:12827820-12827951 - | TGCGTTT-----AG--CGACGTATCTACGAAT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AG--AGATATTTCTGCATTT---GA--AGTGTATCACAGCCAGCTTTGATGGGCATTGCAATAAGCCTAGAT-TCCGATTG----------------------------------------------------------AA-AC |
| D_pseudoobscura | chr2:9824664-9824803 + | TGCGTGCGTGCTTGCGTATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGA------AGAAAGATATATTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-TGCAGTTT-------------------------------------------------------------CG |
| D_persimilis | super_0:10660285-10660410 - | TGCGT------------ATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGA------AGAAAGATATATTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGAT-TGCAGTTT--------------------------------------------------------------- |
| D_willistoni | scaffold_181089:2143458-2143641 - | TGTGT---------------GTGAA-TTGCGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA------AGAAAGATATTTTTGCATTT---GA--AGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGTTTTGCATTTTTCCCCTCATTATTCGCCACACACTCTGGGAGTACCAGCCAACAGAGACAGAGAGCGAGCGAC- |
| D_virilis | scaffold_13047:13335413-13335531 + | TGT-----------------------ACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-------GAATGATATATCTGCAATT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAACG-T-AGCAGAAA------------------------------------------AG--------------TAACA |
| D_grimshawi | scaffold_14906:4357869-4357995 - | TGTGT-----------GTTTGTGTGTACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-------GAATGATATATCTGCAATT---GA--ATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAATG-T-AGCAAA-A------------------------------------------AG--------------AG--- |
| Caenorhabditis_elegans | cel-mir-2:1-98 + | TAAAC-----------A-----------GTAT----A--CAGAAAGCCATCAAAGCGG----TGGTTGATG-------TGT-TGCAAATTATGACTTTCATATCACAGCCAGCTTTGATGTGCT--GCCTGT----------TGCACTGT--------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:5508741-5508858 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_simulans | chr2R:4140609-4140726 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAG--C |
| D_yakuba | chr2L:18140631-18140748 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_eugracilis | scf7180000409209:654058-654175 + | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAA--C |
| D_elegans | scf7180000491107:1596303-1596420 + | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAT--C |
| D_ananassae | scaffold_13266:12795467-12795585 - | AAGTTAG--CAG-------CCTTTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGA--C |
| D_pseudoobscura | chr3:14135687-14135806 - | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--C |
| D_persimilis | super_4:1183061-1183180 + | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--C |
| D_willistoni | scaffold_180701:3433650-3433765 - | ---TTAA--CA--------CA-TTTTGCCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTTAT-AATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAG--T |
| D_virilis | scaffold_12875:5789441-5789560 - | AAATAAACCGAA-------CA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTAGTT-C-GATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAG--C |
| D_grimshawi | scaffold_15112:722942-723066 - | AAAATAA--AAGAACTAAACA-TTTTGTCTTGCTTTGACTCACTCAACC---TGGGTGTGATGTTATTT-C-GATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGA--A |
| Caenorhabditis_elegans | cel-mir-67:1-99 + | GATCAAA--GA-------------------TTCGTCGATCCGCTCATTCTGCCGGTTGTTATGCTATTA-T-CAGA--TTAAGCATCACAACCTCCTAGAAAGAGT-----------AGATCGATTTTAAAACTT |
| Caenorhabditis_briggsae | cbr-mir-67:1-95 + | TAGATA--------------------------TTTCGATCAACTCATTCTGCTGGTTGTTATGCTGACAATTGATG-ATTAAGCATCACAACCTCCTAGAAAGAGT-----------AGACCGATTCTATCT--T |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:13671285-13671406 - | CGATCGTATATC----AACTCCGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAGCGAG---ATC----------------------------------------- |
| D_simulans | chr2R:12409842-12409963 - | CGATCGTATAGC----ACCTCCGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAGCGAG---ATC----------------------------------------- |
| D_yakuba | chr2R:15512007-15512128 + | CGATCGTATAGC----ACCTCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTGAA--------------GA-----------TCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CACTCAGCGAG---ATC----------------------------------------- |
| D_eugracilis | scf7180000409672:1435483-1435608 + | CGATCGTATACCCCAAAAATCTAT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTAAA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATC----------------------------------------- |
| D_elegans | scf7180000491214:575197-575322 + | TGATCGTTAAAGCCTCACATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGACGTTGAA-------AAGCG-ATTTTAGA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATC----------------------------------------- |
| D_ananassae | scaffold_13266:10515593-10515725 + | CGATCATATAGCC-AAGAATCTGT-TGTTAAATTGGCAAGATGTCGGCATAGCTGACGTTGGA-------AAACG-AATTTTGA--------------GA-----------GCGCTATGCT-GCATCTAGTCAGT-TGTTCAATGG-AA----CAGTCAACAAG---ATCGAAACT-------------------------C--------T |
| D_pseudoobscura | chr3:16483204-16483318 - | CGT------ACC----GCATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGAAGTTGAA-------AAGCG-ATCTTTGA--------------GA-----------ACGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAGTCAAC-AG---ATC----------------------------------------- |
| D_persimilis | super_4:278992-279106 + | CGT------ACC----GCATCTGT-TGGTAAATTGGCAAGATGTCGGCATAGCTGAAGTTGAA-------AAGCG-ATCTTTGA--------------GA-----------ACGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAGTCAAC-AG---ATC----------------------------------------- |
| D_willistoni | scaffold_180700:4557862-4557981 - | CATCATCATTA-----TCATCTGTTTTTCGAATTGGCAAGATGTCGGCATAGCTGA---TAAT-------------ATTTT--------------T---------AGAAAAGCGCTATGCT-GCATCTAGTCAGTTTATTCAATAG-AG----CAATCGACAATATTATC----------------------------------------- |
| D_virilis | scaffold_12875:16937652-16937767 - | TCGCCTC---------GCATCTGT-TGTTCAATTGGCAAGATGTCGGCATAGCTGACGTTTGA-------AAGCG-CATTTTTA--------------TA-----------GCGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CAATCAACAAA---A------------------------------------------- |
| D_grimshawi | scaffold_15245:16476618-16476778 - | CTCTCGCGATTC----TCATCTGT-TGGTGAATTGGCAAGATGTCGGCATAGCTGACGTTTGA-------AAGCGCATCTT--A--------------TA-----------GCGCTATGCT-GCATCTAGTCAGT-TATTCAATGG-AA----CACTCAAC-AT---ATCCATACCTGAAATGCTTAGAAACTTGGAGTATCTACGGATTA |
| Caenorhabditis_elegans | cel-mir-72:1-99 + | AGGTCCCGT----------------CAG-AGCTAGGCAAGATGTTGGCATAGCTGAA--TGAT---------------CGC--------------T----ATAACAACTATCAGCTTCGCC-ACATTCTGCCACG-CACTGATG-T-------GAG-------G---ACC----------------------------------------T |
| Caenorhabditis_briggsae | cbr-mir-72:1-123 + | TGGACTCGCC------------------CGAGCTAGGCAGATGTTGGCATAGCTGAAT--GCAAATCAGAAATCG-AAATTCGAAAAGTTTGAATTTCGC------GCGCTCAGCTTCGCC-ACATCGTGCCATG-CGTAGGCT-T---------------GAG---ACC----------------------------------------A |
| Mus_musculus | mmu-mir-31:1-106 + | TGCTCCTGTAACTCGG-----AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GAGAACCTGCTATGCCAACATATTGCCATC-TTTCCTGTCT-GA----CAGC-AG--------CT----------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-31b:1-118 + | TGGCCAAGCTGC----TGTCAGAC-AGGAAAGATGGCAATATGTTGGCATAGCAGG---TTCT-------------------------------CA---------GTTCAACAGCTATGCCAGCATCTTGCCTCC-TCTCCAGTTCCAAGTTTCAGG-AGCAAT---ACC----------------------------------------A |
| Rattus_norvegicus_2 | rno-mir-31a:1-106 + | TGCTCCTGAAACTTGG-----AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GAGAACCTGCTATGCCAACATATTGCCATC-TTTCCTGTCT-GA----CAGC-AG--------CT----------------------------------------- |
| Macaca_mulatta | mml-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Pongo_pygmaeus | ppy-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Gorilla_gorilla | ggo-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Homo_sapiens | hsa-mir-31:1-71 + | GG--------------------------AGAGGAGGCAAGATGCTGGCATAGCTG---TTGAA-------------------------------CT---------GGGAACCTGCTATGCCAACATATTGCCATC-TTTCC---------------------------------------------------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chrX:8887323-8887479 - | TCGCTCCACGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAACATTTT-ATCGTCCGAAAAAA---------------------TGTGATTATT-TTTG--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACTCTATCAGCGTTG |
| D_simulans | chrX:7083953-7084109 - | TCGCTCCTCGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCTCTT-ATCGTCCGAAAAAA---------------------TGTGATTATT-TTTG--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACGCTATCAACGTTG |
| D_yakuba | chrX:12425680-12425836 + | TTTCTCCTCGT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCTTTG-ATCGTCCGAAAAAA---------------------TGTGAATATT-TTTT--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACTCTATCAGCGTTG |
| D_eugracilis | scf7180000408176:324239-324404 - | TTGATAAGCAT--C--AACTCCTAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGT-------TCGAGACTTTTCCTCAACCGGAAAAA---------------------TGTGAAAATTTTTTA--AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTAAT-----TTGACACTATCAACGTGG |
| D_elegans | scf7180000491006:2391280-2391437 - | TGGCTCCTTAT-----------TAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGCGGA-------TCGAGCCAGTT-ATCGACCGAAAAAA---------------------TGTGAATATTT-TTGA-AA-A------AGCGGCTATGCCT-CATCTAGTCAATTGCATTACT-----TTGACACTATCAACGCGG |
| D_ananassae | scaffold_13047:712420-712562 - | ATCCTCG---------------AAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAGAGGA-------TCGAGCGAGTC-ATCGACCGAG--------------------------------ACGAATTC--CA-A------AGCGGCTATGCCT-CATCTAGTCAATTACATTACT-----TTGACACTTTCCACGAGG |
| D_pseudoobscura | chrXL_group1e:8162325-8162445 - | GTGTCCT-----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA------------------------------------A------------------------GAAGATGATTTG--AA-A------TGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGATTCTATCAACGATG |
| D_persimilis | super_13:404315-404435 + | GTGTCCT-----------------GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA------------------------------------A------------------------GAAGATGATTTG--AA-A------TGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGATTCTATCAACGATG |
| D_willistoni | scaffold_181150:794468-794638 + | TCACGAATG-----TG---ATGAAAACAACTAGTGGATTTGGCAAGATGTCGGAATAGCTGAAAGTCACACAAAATCATA-------------------------AAATGTTTGCCGTTTTGTTATTGTTGTGAATTT-TATTGATTT-CAAAAATTACGGCTATGCCT-CATCTAGTCAATTGCATTAGT-----TTGATTAAGTCAAC--TG |
| D_virilis | scaffold_12726:2775742-2775905 - | TTGCAGCACATATATATAAATATAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAAAG--TCATAAATCCAGAATT-------------------TCT---ATT---------TTGTGTATTTTTATTGAGTA-C------AGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGACAAAAGCAAC---G |
| D_grimshawi | scaffold_15203:6378282-6378443 - | TCGACCACCAT--TTGCACCCGCAAACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGACAG-CACAA--GATCACAAATCAAGAAAC-------------------TTT---ATT---------TTGTGTATTTTTATTGAGTA-C------AGCGGCTATGCCT-CATCTAGTCAATTGCATTCAT-----TTGAC---ATCAACAACG |
| Caenorhabditis_elegans | cel-mir-72:1-99 + | AGGTCCCGTC-----------------------AGAGCTAGGCAAGATGTTGGCATAGCTGAATG--------------------------------------------------------------------------AT-CGC-TATAACAACTATCAGCTTCGCCA-CATTCTGCCACG--CACTGAT-----GTGA--------GGACCT |
| Caenorhabditis_briggsae | cbr-mir-72:1-123 + | TGGACTCGCC-----------------------CGAGCTAGGC-AGATGTTGGCATAGCTGAATG-CAAATCAGA-----AATCGAAATTC----------GA-AAAG--TTTGA-ATT---------T-------------CGC-GC-G------CTCAGCTTCGCCA-CATCGTGCCATGCG--TAGGC-----TTGAGACC---------A |
| Mus_musculus | mmu-mir-31:1-106 + | TGCTCCTGTAA-CTCGG----------AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--AG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CCTGT-----------CTGACAGCAGCT |
| Rattus_norvegicus_1 | rno-mir-31b:1-118 + | TGGCCAAGCTG-----------CTGTCAGACAGGAAAGATGGCAATATGTTGGCATAGCAG---------------------------------------------------------------------------GTTCTCAG--TT-C------AACAGCTATGCCAGCATCTTGCCTCCTCT-CCAGTTCCAAGTTTCAGGAGCAATACCA |
| Rattus_norvegicus_2 | rno-mir-31a:1-106 + | TGCTCCTGAAA-CTTGG----------AAC-TGGAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--AG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CCTGT-----------CTGACAGCAGCT |
| Macaca_mulatta | mml-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Pongo_pygmaeus | ppy-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Gorilla_gorilla | ggo-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Homo_sapiens | hsa-mir-31:1-71 + | G--------------------------------GAGAGGAGGCAAGATGCTGGCATAGCTG---------------------------------------------------------------------------TTGAACTG--GG-A------ACCTGCTATGCCAACATATTGCCATCTTT-CC-------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:19791046-19791174 + | CT-----GAGTGCCACCAGACT-CT--------TCCTCTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--ATT-GC-TTCAGGCAATAC-----------AACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAACGCCG---------------AATG------ |
| D_simulans | chr3L:19083102-19083230 + | CT-----GAGTGCCACCAGACT-CC--------TCCTCCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--ATT-GC-TTCAGGCAATAC-----------AACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCG---------------AATG------ |
| D_yakuba | chr3L:20771315-20771443 - | CT-----GAGTGCCACCAGACT-CT--------TACTCCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--ATT-GC-TTCAGGCAATAC-----------AACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCG---------------AGTG------ |
| D_eugracilis | scf7180000409466:5133811-5133939 - | CC-----GAATGCCAGCAGGCT-CT--------ATCTCCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTT-------------------CCA--CTT-GC-TTCAGGCAATAC-----------AACTTCAGTGCAAACTCTGTGCATTTCACAAA-CAACGCCG---------------ACGG------ |
| D_elegans | scf7180000491193:4070917-4071045 + | CC-----GGATGCCAGCAGACT-CT--------TCCTCCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--CTT-GC-CTCAGGCAATAC-----------AACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CATCGTCG---------------ACCG------ |
| D_ananassae | scaffold_13337:19456783-19456919 - | CC-----GAATACCAGCAGACA-CTATACACCCGCCCTCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CCA--CTT-GC-TCCAGGCAATAC-----------AACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCA---------------ACTT------ |
| D_pseudoobscura | chrXR_group6:5913809-5913939 + | AA-----AAACCAAACCAAACA-C-----------TCCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CAT--CTT-GATTTCAGGCAATAC-----------AACTGCAATGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCC------------AATG------ |
| D_persimilis | super_47:413986-414116 + | AA-----AAACCAAACCAAACA-C-----------TCCCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CAT--CTT-GATTTCAGGCAATAC-----------AACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCC------------AATG------ |
| D_willistoni | scaffold_180698:8572488-8572628 + | CG-----GAACCTAAACAAATT------------------GAAGTTACACGAAGGTGCATTGTAGTCGCATTGTCTGTGCTCCAAAAAAAAAAAACCCCCA--GTTTCTATTCAGGCAATAC-----------AACTGCAGTGCAAGCTTCGTGTGACTTATAAG-CAACGGCA---------------AATA------ |
| D_virilis | scaffold_13049:22941104-22941227 - | CC-----AAAATCC----GACA------------TCTCTGGAGCTGTTACGGAGGTGCATTGTAGTCGCATTGTCTGTC-------------------TCAAATTT-GC-CCGCGGCAATAC-----------AACTGCAGTGCAAGCTCCGTGCAGTTCACACG-CAACGTCG---------------GAAG------ |
| D_grimshawi | scaffold_15110:18214439-18214590 - | CTCTGCACAGTTAGGGCAGACATC-----------TCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTC-------------------CAAAAATT-GC-ATGCGGCAATAC-----------AACTGCAGTGCAAGCTCCGTGCAGTTCACTAG-CAACAACT---CTTTGATCGCTGATCGATCTGA |
| Mus_musculus | mmu-mir-33:1-69 + | CT-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT-------------------C--------------TGGCAATACCTGTGCAATGTTTCCACAGTGCAT-CACGG----------------------------------------------- |
| Rattus_norvegicus | rno-mir-33:1-69 + | CC-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT-------------------C--------------TGGCAGTACCTGTGCAATGTTTCCACAGTGCAT-CACGG----------------------------------------------- |
| Macaca_mulatta_1 | mml-mir-33a:1-69 + | CT-----G--------------------------------------------CGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-TACAG----------------------------------------------- |
| Macaca_mulatta_2 | mml-mir-33b:1-96 + | GC-----GGG----------------------------------CGGCCCCGCGGTGCATTGCTGTTGCATTGCACGTG-------------------TG----------------TGAGGCGGGTGCAGTGCCTCGGCAGTGCAG-CCCGGAGCCGGCCCCTGG-CACCGC--------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-33b:1-90 + | GC-----G---------------------------------AGGCGGCGCCCGCGTGCAT-GCTGTTGCAT-GCACGTG-------------------T------T-GA------------GCGGTGCAGTGCCTCGGCAGTGCAG-CCCGGAGCCGGCCCCTGG-CACC----------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-33a:1-69 + | CT-----G--------------------------------------------CGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-CACAG----------------------------------------------- |
| Gorilla_gorilla | ggo-mir-33:1-69 + | CT-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-CACAG----------------------------------------------- |
| Homo_sapiens_1 | hsa-mir-33a:1-69 + | CT-----G--------------------------------------------TGGTGCATTGTAGTTGCATTGCATGTT-------------------CTG--------------GTGGTACCCATGCAATGTTTCCACAGTGCAT-CACAG----------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-33b:1-96 + | GC-----GGG----------------------------------CGGCCCCGCGGTGCATTGCTGTTGCATTGCACGTG-------------------TG----------------TGAGGCGGGTGCAGTGCCTCGGCAGTGCAG-CCCGGAGCCGGCCCCTGG-CACCAC--------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:5926643-5926771 + | CAAACAA-GTATTC-T-----TAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAAC------------------TTAT-----AA |
| D_simulans | chr3R:15449371-15449500 - | CAATCAAAGTATTC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAAC------------------TTAT-----GG |
| D_yakuba | chr3R:9974454-9974582 + | CAATCAA-GTATTC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAACG------------------TAC-----TC |
| D_eugracilis | scf7180000409470:260340-260477 + | AAATCAA-GTAACC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT---TTGC-CGTTG-AAA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAACGATAA--TGA-----------TAGTTTAT |
| D_elegans | scf7180000490967:803608-803743 - | CAATCAA-GTAACC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TT--ATTGC-CGTTG-ACA----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAAAGCAACGATAA--TGC---------TAT-----AT |
| D_ananassae | scaffold_13340:6489967-6490093 + | TAATTCA-GTTACC-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCTG--G-------TGCTCGTTG-GCAATTAATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTAGAGCAAC------------------TT--------A |
| D_pseudoobscura | chr2:5019555-5019683 - | AAATCCA-GAAAAT-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--AAAT--ATTGC-CTTTG-ACC----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCCATAACAACGAT------------------------AA |
| D_persimilis | super_19:724982-725124 - | AAATCCA-GAAAAT-T-----CAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--AAAT--ATTGC-CTTTG-ACC----ATTCACAGCCACTATCTTCACTGCCGCCGCGACAAGCCATAACAACGATAA---GCAAC-----ATAT--AATCG |
| D_willistoni | scaffold_181089:11166523-11166648 - | TAACA--------T-T-----CTATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTA-GCCA--A-TTAAATTGC-CAA-A-ACAA-TAAACCACAGCCACTATCTTCACTGCCGCCGCGACAGGCCATGACAACAA------------------TC-----GG |
| D_virilis | scaffold_12855:2682541-2682664 - | AAAAAAA-ATTACCTTAAATCCGATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTG-GCCA--A----------T---TG-ACA----AATCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTATGACAGCAA-------------------------AA |
| D_grimshawi | scaffold_14624:2267430-2267555 + | AAACCAA-ATTCCATT-----GAATTGGCTATGCG-----CTTTGGCAGTGTGGTTAGCTGGTTGTGTG-GCCA--A----------C---TG-ACA----AATCACAGCCACTATCTTCACTGCCGCCGCGACAAGCTATGACACCAATAA-------------ATAT-----AA |
| Caenorhabditis_elegans | cel-mir-34:1-97 + | CGG------------------------ACAATGCT----CGAGAGGCAGTGTGGTTAGCTGGTTGCATA--------------TTTC----------C----TTGACAACGGCTACCTTCACTGCCACCCCGAACA------------------TGTCGTCCATCTTTG-----AA |
| Caenorhabditis_briggsae | cbr-mir-34:1-93 + | AAGCA----------------------CT----CATGGTCGTGAGGCAGTGTGGTTAGCTGGTTGCATA-CACA-------------G---------G----TTGACAACGGCTACCTTCACTGCCACCCCGAACA------------------------------TGTAGTCCTC |
| Mus_musculus_1 | mmu-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTG-C--G-----------GT---------G----CTGACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Mus_musculus_3 | mmu-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACAGCCAGGTAAA---------AAGA----------------------------CT |
| Mus_musculus_2 | mmu-mir-34a:1-102 + | CCA------------------------GCTGTGAGTAATTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GTA---------TT---AGCTAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--ATT-------GT |
| Rattus_norvegicus_1 | rno-mir-34a:1-102 + | CC------------------------GGCTGTGAGTAATTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GTA---------TT---AGCTAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTT-------GT |
| Rattus_norvegicus_2 | rno-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACAGCCAGGTAAA---------AAGA----------------------------CT |
| Rattus_norvegicus_3 | rno-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTAATTAGCTGATTGTAGTG-C--G-----------GT---------G----CTGACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Macaca_mulatta_1 | mml-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTACAC--ATTGTGGGGCCT |
| Macaca_mulatta_2 | mml-mir-34c:1-77 + | AGT------------------------------C-TAGTTACCAGGCAGTGTAGTTAGCTGATTGCTG------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGA----------------------------TT |
| Macaca_mulatta_3 | mml-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------GT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Pongo_pygmaeus_2 | ppy-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGA----------------------------TT |
| Pongo_pygmaeus_3 | ppy-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------AT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Pongo_pygmaeus_1 | ppy-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTTGTGGGGCCC |
| Gorilla_gorilla_2 | ggo-mir-34b:1-110 + | GTGCCCG-GT----------------------GCTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------GT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCACAGCATCACCGC--CGC---------CCG-----GC |
| Gorilla_gorilla_3 | ggo-mir-34c:1-108 + | TTT------------------CTATGAGTC-----TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGATTTGGGAATTCGTCCA--AATGA---GCTG |
| Gorilla_gorilla_1 | ggo-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTTGTGGGGCCC |
| Homo_sapiens_1 | hsa-mir-34b:1-84 + | GTG------------------------------CTCGGTTTGTAGGCAGTGTCATTAGCTGATTGTACTG-T--G-----------GT---------G----GTTACAATCACTAACTCCACTGCCATCAAAACAAGGCA-----------------------------------C |
| Homo_sapiens_3 | hsa-mir-34a:1-110 + | GGCCA----------------------GCTGTGAGTGTTTCTTTGGCAGTGTC-TTAGCTGGTTGTTGTGA---GCA---------AT---AG-TAAG----GAAGCAATCAGCAAGTATACTGCCCTAGAAG---------------------TGCTGCAC--GTTGTGGGGCCC |
| Homo_sapiens_2 | hsa-mir-34c:1-77 + | AGT------------------------------C-TAGTTACTAGGCAGTGTAGTTAGCTGATTGCTA------------------AT---------A----GTACCAATCACTAACCACACGGCCAGGTAAA---------AAGA----------------------------TT |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:857527-857647 + | CATCCGAAAC---CCCT---------------TC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_simulans | chr2L_random:38968-39087 + | CATCCGAATC---C-CT---------------CC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C------------ATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_yakuba | chr2L:841557-841670 + | CATCCGAGTC-----------------------C----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--G--------------CCTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-ACTAAAGCGCCACGTGG-----------------T |
| D_eugracilis | scf7180000409554:1584269-1584382 + | TATCACTAT-----------------------CC----------------------C-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGAT--C--------------GTTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCG-ATTAAATCGCCACGTGG-----------------T |
| D_elegans | scf7180000490458:433892-434014 - | ACTCCTTCA-AAA-------------------AA----------------------G-GGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTAAT--TGC---------AATGCTACAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTG-ATTTAAACGCCACGTGG-----------------T |
| D_ananassae | scaffold_12916:2746986-2747121 + | CCACGGAAA----------------------------AGACACCCCACGGAAACGAG-GGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAT--CGC---------AATGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCG-TTGCAAACGCCACGTGG-----------------T |
| D_pseudoobscura | chr4_group3:5649077-5649230 + | CATCCAAGGC---CTGTGCCTGTGT------CTG-AGAGCCCACCCACCCGAAT--A-GGGCAGCGAATTACTTGGGCCAGGGGAATTCAAACTGTGAT--CGC---------AATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTC-AAGTAAACGCCACGTGG----GT-----------T |
| D_persimilis | super_1:7140235-7140385 + | CATCCAAGGC---CTGTGCCTGTGC------TTG-AGAGCCCACCCACCCGAAT--A-AGGCAGCGAATTACTTGGGCCAGGGGAATGCAAACTGTGAT--CGC---------AATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTC-AAGTAAACGCCACGTGG------------------ |
| D_willistoni | scaffold_180772:2278802-2278947 - | AATTTAAAAC---CGTTTTCCATTTCATTTTTTG----------------------G-GGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTGAA--T---TATTTCAAAATGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTACAATTGCGACACGTGG-----------------T |
| D_virilis | scaffold_12963:19405390-19405507 + | CATTCAAAG-----------------------TT----------------------C-GGGCAGCAAATTACTTGGGCCAAGGGAATGCAAACTGTCAA--CGC---------ATTGCAATAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCA-AC-ATAACGCCACGTGG-----------------T |
| D_grimshawi | scaffold_15252:7270330-7270448 + | C---------------------------------------------------------GGGCAGCGAATTACTTGGGCCAAGTGGATGTAAACTGTGAAAGCGCATTTTGCATATAACAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCG-AT-ATAACGCCACGTGG-----------------G |
| Mus_musculus | mmu-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Rattus_norvegicus | rno-mir-375:1-75 + | TCCG----------------------------GCC----------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGTGA----------------------------GGCAGGGG-----------C |
| Macaca_mulatta | mml-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Pongo_pygmaeus | ppy-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Gorilla_gorilla | ggo-mir-375:1-112 + | CGACCGCCA-GGCCCCGG-GCCCTCCGCTCCCGCC----------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGTGA----------------------------GGCAGGGGCGGCCTCTCAGC |
| Homo_sapiens | hsa-mir-375:1-64 + | CC-------------------------------------------------------C-CGCGACGAGCCCCTCGCACAAACCGGACCTGA-----------------------------GCGTTTTGTTCGTTCGGCTCGCGT----------------------------GAGG-----------------C |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:16493557-16493674 + | GA-----TTG--GTC-CTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TA |
| D_simulans | chr2R:15154934-15155051 + | GA-----TTG--GTC-CTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TA |
| D_yakuba | chr2R:12702727-12702844 - | GA-----CTG--GTC-CTCCTGGGAGTGCATTTCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TA |
| D_eugracilis | scf7180000409474:1467534-1467651 - | GA-----TTG--GCT-CTCCTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCT---CTGCATTC-------TA |
| D_elegans | scf7180000491201:759743-759860 + | GA-----TTG--GCT-CTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCT---CTTCATTC-------TG |
| D_ananassae | scaffold_13266:4109353-4109468 - | TGGGA---------GTCCTGTGGAAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTTTATGGTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTCG--GCT---CATCACTC-------TA |
| D_pseudoobscura | chr3:8655644-8655762 - | GA-----TTG--GCCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCT---CTTCATTC-------TA |
| D_persimilis | super_4:2540080-2540198 - | GA-----TTG--GCCTCTCCTGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTA---ATAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCT---CTTCATTC-------TA |
| D_willistoni | scaffold_180700:3423572-3423692 - | AA--A---TT--GTGTGTGGT-GGAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTAATAAAATTAACAATAAATCCCTTGTCTTCTTATGGCGTGTATTTAAAGCT---CTTCATT--------TG |
| D_virilis | scaffold_12823:2295157-2295274 - | GTCGTCT--------------CCAAATGCTTTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTA---ATAACAATAAATCCCTTGTCTTCTTATGGCGCGCATTC--TGCT---CTTCATTTATAATAATT |
| D_grimshawi | scaffold_15245:15782213-15782323 + | GT-----TTA--------------AATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTA---ATAACAATAAATCCCTTGTCTCCTAACGGCGCGCATTG--TGCT---CTTCATTATTTC--TTA |
| Mus_musculus_1 | mmu-mir-7a-2:1-97 + | GG-----TCG--------------GGCCAGCCCCGTTTGGAAGACTAGTGATTTTGTTGTTGTGTCTCTGTAT---CCAACAACAAGTCCCAGTCTGCCACATGGTGCTGGTCA--------------TTT-------CA |
| Mus_musculus_3 | mmu-mir-7a-1:1-108 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAAACGACAACAAATCACAGTCTGCCATATGGCACAGGCCA------CCTCTA-----------CAG |
| Mus_musculus_2 | mmu-mir-7b:1-111 + | AG-----GAGCGGAGT---ACGTGAGCCAGTGCTATGTGGAAGACTTGTGATTTTGTTGTTCTGATAT-GAT----ATGACAACAAGTCACAGCCAGCCTCATAGCGTGGACTC-----CTATCAC-----------CTT |
| Rattus_norvegicus_1 | rno-mir-7a-1:1-97 + | TG-----TTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAGACGACAACAAATCACAGTCTGCCATATGGCACAGGCCA------CCT----------------- |
| Rattus_norvegicus_2 | rno-mir-7a-2:1-95 + | GG--A---CA--------------GACCAGCCCTGTCTGGAAGACTAGTGATTTTGTTGTTGTGTCTGTGT-----CCAACAACAAGTCCCAGTCTGCCACATGGTGTTGGTCA--------------CAT-------CA |
| Rattus_norvegicus_3 | rno-mir-7b:1-110 + | AGG----CCA--GAAC-AC--ATGAGCCAATGCTATGTGGAAGACTTGTGATTTTGTTGTTCTGATAT-GAT----ATGACAACAAGTCACAGCCAGCCTCATAGAGTGGACTC-----CCATCAC-----------CTT |
| Macaca_mulatta_1 | mml-mir-7-2:1-110 + | CTGGATA---CAGAGT-GA--AGTGGCTGGCCCCGTCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTGCCGAATGGTGCCAGCCA--------------TTG-------CA |
| Macaca_mulatta_2 | mml-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATTGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Macaca_mulatta_3 | mml-mir-7-3:1-110 + | AG--A--TTA--GAGT-GGCTATGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-GCT----ACGACAACAAATCACAGCCGGCCTCATAGCGCAGACTC-----CCTTCGA-----------C-- |
| Pongo_pygmaeus_2 | ppy-mir-7-3:1-110 + | AG--A--TTA--GAGT-GGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-ACT----ATGACAACAAGTCACAGCCGGCCTCATAGCGCAGACTC-----CCTTCGA-----------C-- |
| Pongo_pygmaeus_3 | ppy-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Pongo_pygmaeus_1 | ppy-mir-7-2:1-110 + | CTGGATA---CAGAGT-GG--ACCGGCTGGCCCCGTCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTGCCTAATGGTGCCAGCCA--------------TCG-------CA |
| Gorilla_gorilla_2 | ggo-mir-7-2:1-110 + | CTGCATA---CAGAGT-GG--ACCGGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTGCCTAATGGTGCCAGCCA--------------TCG-------CA |
| Gorilla_gorilla_3 | ggo-mir-7-3:1-110 + | AG--A--CTG--GAGT-GGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-ACT----ACGACAACAAGTCACAGCCGGCCTCACAGCGCAGACTC-----CCTTCGA-----------C-- |
| Gorilla_gorilla_1 | ggo-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Homo_sapiens_1 | hsa-mir-7-3:1-110 + | AG--A--TTA--GAGT-GGCTGTGGTCTAGTGCTGTGTGGAAGACTAGTGATTTTGTTGTTCTGATGT-ACT----ACGACAACAAGTCACAGCCGGCCTCATAGCGCAGACTC-----CCTTCGA-----------C-- |
| Homo_sapiens_3 | hsa-mir-7-2:1-110 + | CTGGATA---CAGAGT-GG--ACCGGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGC---TCAACAACAAATCCCAGTCTACCTAATGGTGCCAGCCA--------------TCG-------CA |
| Homo_sapiens_2 | hsa-mir-7-1:1-110 + | TTGGATGTTG--------------GCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACT-AAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT-G---CCTCTA-----------CAG |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16698539-16698665 + | ATG---AGTGCC---T-T-AGAGTGAAG----------------------CTGACT-TGCCATTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TTCTGCAGGTCAATCG---TCA-------GAAACA--AT |
| D_simulans | wck39a12.g1:600-726 - | ATG---AGTGCG---T-C-AGAGTGTAG----------------------CTGACT-TACCATTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TTGTGCAGATCAATCG---TCA-------GAAAC---AA |
| D_yakuba | chr2R:4404406-4404531 - | ATA---AGTGAA---T-TGAGAGTGTAG----------------------CTGCCT-TGCCATTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TATACTA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TTCTGCAGATCAATCA---TC---------AGACA--AA |
| D_eugracilis | scf7180000408961:272475-272601 + | ACA---AGTGAT---T-A-AAAGAGAAA----------------------CTGCTC-TGCCGTTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TTTGGTAGATCAATCA---TCA-------AAAATA--AC |
| D_elegans | scf7180000490579:645389-645516 - | AAA---AGTGTT---T-AAAGAATGTGG----------------------CTGCTT-GACCGTTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAACTA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TTTTGCAGATCAATCA---TCC-------AAAATA--AG |
| D_ananassae | scaffold_12916:15864702-15864823 - | TAT---AGTGTT---C-T-A-----TAG----------------------CTGCTT-AACCGATGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAA-TA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TTCCGCAGGCCTGTCT---TCAA------GGAATA--AA |
| D_pseudoobscura | chr4_group3:8443957-8444103 + | GAA---AGTGTT---T-A-AAAGTACAACAATCTAATCTGTGCTTAAGCCCTGCTC-TGCTTCTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAAATA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TC-TGTGGAAACTTCA---TCC--------AAACA--AT |
| D_persimilis | super_1:9895076-9895222 + | GAA---AGTGTT---T-A-AAAGTACGACAATCTAATCTGTGCTTAAGCCCTGCTC-TGCTTCTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TAAAATA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TC-TGTGGAAACTTCA---TCC--------AAACA--AT |
| D_willistoni | scaffold_181061:28846-28963 - | GTA---ATGGA--------------TAA----------------------TGGTCT-TGCCTATGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TGAC-TA-CTTCATAAAGCTAGATTACCAAAG-CA---------TGGGC-TCTGGCTGA--CTTAATCAACG-------CAAG--TGTT |
| D_virilis | scaffold_12963:12863019-12863151 - | ATA---GCCAG-GATT---AGA-TG---------------------AACGCCGCAC-TGCCGTTGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TGAA-TA-CTTCATAAAGCTAGATTACCAAAG-CA---------TTGGC-TCT-GTGGCCAGCTTA---GCAAAGTTGTGAAACG--AT |
| D_grimshawi | scaffold_14978:831072-831198 + | ATTTAAAGTGCT---T-C-TTCTTGGTG----------------------CCACAT-TGCCGTCGCTTTGGCGCTTTAGCTGT-ATGATAGATT-TGAA-TA-CTTCATAAAGCTAGATTACCAAAG-CA---------TCGGC-GCCTGTGGCCAGCTTA---A---------CAAACG--TT |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTA-GACAT----------------------------------------------TCTCCGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGGTTTCTTTCATAAAGCTAGGTTACCAAAGCTCGGCG------------TCT--T-----------------------GAT--CTAC |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AGA---AC-AT----------------------------------------------TCTCCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGACGT-CTTCATAAAGCTAGGTTACCAAAGCTCGGCGTT----------CC---AG---------------------------TTCG |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GGA---GGCCC----------------------------------------------GTTTCTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------------------------CTCA |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G---------------------------------------------------------TTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC------------------------------------------------- |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CGG---GGTTG----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA----------C--------------------------------CCCA |
| Rattus_norvegicus_1 | rno-mir-9b-1:1-108 + | GCGC--AGTGTA---T-G-GGGTT---------------------------------ATTTTTACTTTCGGTTATCTAGCTTT-ATGAAGACTC-CACA-CC-ACTCATACAGCTAGATAACCAAAGATAACAACCAACCCCGCCTCC--------------------------------TGGC |
| Rattus_norvegicus_4 | rno-mir-9b-2:1-118 + | AGC---ACTCCT---C-G---------GTGATCT----------TGAAG------GAGTTTTTACTTTCGGTTATCTAGCTTT-ATGAAGACCA-AT---AC-ACTCATACAGCTAGATAACCAAAGATAACAACT-----CGCTTCC---------CTCA---C-A--------AGGCT--GT |
| Rattus_norvegicus_5 | rno-mir-9a-2:1-87 + | GGA---AGCGA----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC----------TCC--------------------------------TTCA |
| Rattus_norvegicus_2 | rno-mir-9b-3:1-115 + | GCA---CGCAG-AAGTTG-TTA------------------------GAG------TCATTTCTACTTTCGGTTATCTAGCTTT-ATGACGGCTC-TGTG-GC-ACTCATACAGCTAGATAACCAAAGAGAGAAACGGGC------CT----------CCCA---TT---------CGCCG--GC |
| Rattus_norvegicus_3 | rno-mir-9a-3:1-90 + | GGA---GGCCC----------------------------------------------GTTTCTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------------------------CTAA |
| Rattus_norvegicus_6 | rno-mir-9a-1:1-89 + | CGG---GGTTG----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA----------C--------------------------------CCCA |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CGG---GGTTG----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA----------C--------------------------------CCCA |
| Macaca_mulatta_2 | mml-mir-9-3:1-90 + | GGA---GGCCC----------------------------------------------GTTTCTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGCTCTCAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------------------------CTCA |
| Macaca_mulatta_3 | mml-mir-9-2:1-87 + | GGA---AGCGA----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC----------TCC--------------------------------TTCA |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GGA---AGTGA----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC----------TCC--------------------------------TTCA |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CGG---GGTTG----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA----------C--------------------------------CCCA |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GGA---GGCCC----------------------------------------------GTTTCTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------------------------CTCA |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GGA---AGCGA----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC----------TCC--------------------------------TTCA |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GGA---AGCGA----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGTAT-TG---GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAAC----------TCC--------------------------------TTCA |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CGG---GGTTG----------------------------------------------GTTGTTATCTTTGGTTATCTAGCTGT-ATGAGTGGTG-TGGA-GT-CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA----------C--------------------------------CCCA |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GGA---GGCCC----------------------------------------------GTTTCTCTCTTTGGTTATCTAGCTGT-ATGAGTGCCA-CAGA-GC-CGTCATAAAGCTAGATAACCGAAAGTAGAAATGATT-----------------------------------------CTCA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2R:12718922-12719038 + | ATC----------------------------------------------------TTG--------------CTAA--TTAGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTT-T----T-ATAACTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TAACCTTCAGTACC-AC |
| D_simulans | chr2R:11454608-11454724 + | ATC----------------------------------------------------TTG--------------CTAA--TTAGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTT-T----T-ATAACTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TAACCTTCAGTACC-AC |
| D_yakuba | chr2R:16257218-16257334 - | ATC----------------------------------------------------TTG--------------CTAA--TTAGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTT-T----T-ATAACTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TAACCTTCAGTAGC-AC |
| D_eugracilis | scf7180000409672:2416246-2416361 - | AAC----------------------------------------------------TTG--------------CTAA--TTAGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTTT-C---TTATAACTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TAACCTTCAGT----AC |
| D_elegans | scf7180000491214:1652880-1652996 - | AAC----------------------------------------------------TTG--------------CTAA--TTAGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTTT-----G-ATAACTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TAACCTTCAGTACG-AA |
| D_ananassae | scaffold_13266:13876642-13876748 - | ATC----------------------------------------------------TTG--------------CTTA--TTTGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTTC-----TGATAACTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TAACC------------ |
| D_pseudoobscura | Unknown_singleton_1898:47537-47693 - | AAA-----------TAACAAAAGAGGGAAACACAGTGCGGTGACGAAAACACGTTTTG--------------CT-A--TTCGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTT------AGATACCTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TATCCATCATAAAT-CC |
| D_persimilis | super_4:6545710-6545866 + | AAA-----------TAACAAAAGAGGGAAACACAGTGCGGTGACGAAAACACGTTTTG--------------CT-A--TTCGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-CC-TTT------AGATACCTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TATCCATCATAAAT-CC |
| D_willistoni | scaffold_180700:6381462-6381593 + | CGC----------------------------------------------------TTG----CAAAAAGATTCT-T--CTTGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-TT-TGTA-CTATAGATATCTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TATCCATCATAAATCAT |
| D_virilis | scaffold_12875:10672387-10672513 - | ATC----------------TG---------------------------------TTTGCTTGCAAT----TACTTA--TTTGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-TC-TTG--ATTTAAATAATTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TATACATCA-------- |
| D_grimshawi | scaffold_15245:3783124-3783258 - | ATTTTTATGTGAAATAATCAA---------------------------------TTTG--------------CT------TGCAAGG----ACATCTGTTC---ACATC-TTACCGG-GCAGCATTAGAT-TC-TTG--ATTTAAATAATTCTAATACTGTCAGGTAAAGATGTCGT-CCGTGTCCT---TATCCATCATAA-A-TC |
| Caenorhabditis_elegans | cel-mir-236:1-98 + | TCG---------------------------------------------------------------------------------GTG----ACCGATGTCC--AGCGTC-TTACCTGTTCAATATTTAGACTG-ACT--ATC-AAAGAGATCTAATACTGTCAGGTAATGACGCTGGATTGT--CAT---GT-----------C-AT |
| Caenorhabditis_briggsae | cbr-mir-236:1-100 + | AAG----------------------------------------------------TGA--------------C----------------------CAATGTCCAGCGTC-TTACCTGTTCAATATTTAGACTG-ACCA-AACCC-ATAGCTCTAATACTGTCAGGTAATGACGCTGGATAGT--CTT---GT-C-A-------T-TG |
| Mus_musculus_1 | mmu-mir-200a:1-90 + | CT-----------------------------------------------------------------------------------GG----GCCTCTGTGG---GCATC-TTACCGG-ACAGTGCTGGAT-TT-CTTG-G---C-TTGACTCTAACACTGTCTGGTAACGATGTTCAAAGGTGACC-----------------C-AC |
| Mus_musculus_3 | mmu-mir-429:1-83 + | CC------------------------------------------------------TG--------------C----------------------TGATGG---ATGTC-TTACCAG-ACATGGTTAGAT-CT-GGAT-G---C-ATCTGTCTAATACTGTCTGGTAATGCCGTCCATCCACGG----------------------C |
| Mus_musculus_2 | mmu-mir-141:1-72 + | GGG-------------------------------------------------------------------------------------------------T---CCATC-TTCCAGT-GCAGTGTTGGAT-GG-TTGA-AGTATGAAGCTCCTAACACTGTCTGGTAAAGATGGCCC------------------------------ |
| Mus_musculus_5 | mmu-mir-200b:1-70 + | GC----------------------------------------------------------------------------------------------CGTGG---CCATC-TTACTGG-GCAGCATTGGAT-AG-TG--T----C-TGATCTCTAATACTGCCTGGTAATGATGACGG-C---------------------------- |
| Mus_musculus_4 | mmu-mir-200c:1-69 + | CCC-----------------------------------------------------------------------------------------------------TCGTC-TTACCCA-GCAGTGTTTGGGTGCTG----GTT-GGGAGTCTCTAATACTGCCGGGTAATGATGGAGG------------------------------ |
| Rattus_norvegicus_1 | rno-mir-200c:1-69 + | CCC-----------------------------------------------------------------------------------------------------TCGTC-TTACCCA-GCAGTGTTTGGGTGCTG----GTT-GGGAGTCTCTAATACTGCCGGGTAATGATGGAGG------------------------------ |
| Rattus_norvegicus_4 | rno-mir-141:1-94 + | GGC----------------------------------------------------TGA-----------------------------------CTCTGAGT---CCATC-TTCCAGT-GCAGTGTTGGAT-GG-TTGA-AGTACGAAGCTCCTAACACTGTCTGGTAAAGATGGCCC-CCGGGTCAG---T--------------TC |
| Rattus_norvegicus_5 | rno-mir-429:1-85 + | TGC----------------------------------------------------CTG--------------C----------------------TGATGG---ATGTC-TTACCAG-ACATGGTTAGAT-CT-GGAT-G---T-ATCTGTCTAATACTGTCTGGTAATGCCGTCCATCCATGGC---------------------- |
| Rattus_norvegicus_2 | rno-mir-3548:1-120 + | CTT----------------------------------------------------CGG--------------CGAG----TGTTGGG----TCACCTTTGA---ACATCGTTACCAG-ACAGTGTTAGAG-TCAA----GCC-A-AGAAATCCAGCACTGTCCGGTAA-GATGCCCA-CAGAGGCCCAGGTATGCTTTGGTAGGAAG |
| Rattus_norvegicus_3 | rno-mir-200b:1-95 + | CCA------------------------------------------------------------------------------ACTTGG----GCAGCCGTGG---CCATC-TTACTGG-GCAGCATTGGAT-AG-TG--T----C-TGATCTCTAATACTGCCTGGTAATGATGACGG-CGGAGCCCT---GCACG------------ |
| Rattus_norvegicus_6 | rno-mir-200a:1-89 + | CT-----------------------------------------------------------------------------------GG----GCCTCTGTGG---GCATC-TTACCGG-ACAGTGCTGGAT-TT-CTTG-G---C-TTGACTCTAACACTGTCTGGTAACGATGTTCAAAGGTGACC-------------------CA |
| Macaca_mulatta_1 | mml-mir-429:1-83 + | CGC----------------------------------------------------CGG--------------C----------------------CGATGA---GCGTC-TTACCAG-ACACGGTTAGAC-CT-GG--C----T-CTCTGTCTAATACTGTCTGGTAAAACCGTCCATCCGCGGC---------------------- |
| Macaca_mulatta_2 | mml-mir-200c:1-68 + | CCC-----------------------------------------------------------------------------------------------------TCGTC-TTACCCA-GCAGTGTTTGGGTGC-G----GTT-GGGAGTCTCTAATACTGCCGGGTAATGATGGAGG------------------------------ |
| Macaca_mulatta_3 | mml-mir-141:1-95 + | TGG----------------------------------------------------CCG--------------G--------------------CCCTGGGT---CCATC-TTCCAGT-ACAGTGTTGGAT-GG-TCTA-ATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGCCC-CCGGGTCGG---T--------------TT |
| Macaca_mulatta_4 | mml-mir-200a:1-90 + | CC-----------------------------------------------------------------------------------GG----GCCCCTGTGA---GCATC-TTACCGG-ACAGTGCTGGAT-TT-CCCA-G---C-TTGACTCTAACACTGTCTGGTAACGATGTTCAAAGGTGACC-----------------C-AC |
| Pongo_pygmaeus_4 | ppy-mir-141:1-95 + | TGG----------------------------------------------------CCG--------------G--------------------CCCTGGGT---TCATC-TTCCAGT-ACAGTGTTGGAT-GG-TCTA-ATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGCCC-CCGGGTGGG---T--------------TC |
| Pongo_pygmaeus_2 | ppy-mir-429:1-80 + | CGC----------------------------------------------------CGG--------------C----------------------CGATGG---GCGTC-TTACCAG-ACATGGTTAGAC-CT-GG--C----C-GTCTGTCTAATACTGTCTGGTAAAACCGTCCATCCG-------------------------C |
| Pongo_pygmaeus_3 | ppy-mir-200c:1-68 + | CCC-----------------------------------------------------------------------------------------------------TCGTC-TTACCCA-GCAGTGTTTGGGTGC-G----GTT-GGGAGTCTCTAATACTGCCGGGTAATGATGGAGG------------------------------ |
| Pongo_pygmaeus_1 | ppy-mir-200a:1-88 + | CC-----------------------------------------------------------------------------------GG----GCCCCTGTGA---GCATC-TTACCGG-ACAGTGCTGGAT-TT-CCCA-G---C-TTGACTCTAACACTGTCTGGTAACGATGTTCAAAGGTGAC--------------------CC |
| Gorilla_gorilla_2 | ggo-mir-141:1-95 + | CGG----------------------------------------------------CCG--------------G--------------------CCCTGGGT---CCATC-TTCCAGT-ACAGTGTTGGAT-GG-TCTA-ATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGCCC-CCGGGTGGG---T--------------TC |
| Gorilla_gorilla_3 | ggo-mir-200c:1-67 + | CC------------------------------------------------------------------------------------------------------TCGTC-TTACCCA-GCAGTGTTTGGGTGC-G----GTT-GGGAGTCTCTAATACTGCCGGGTAATGATGGAGG------------------------------ |
| Gorilla_gorilla_4 | ggo-mir-429:1-111 + | CCG----------------------------------------------------GAG--------------GCCA--CCCACACCACCGCCGGCCGATGG---GCGTC-TTACCAG-ACATGGTTAGAC-CT-GG--C----C-CTCTGTCTAATACTGTCTGGTAAAACCGTCCATCAGCCGCCT-------------GATC-AC |
| Gorilla_gorilla_5 | ggo-mir-200a:1-111 + | GGG----------------------------------------------------ACC--------------CCACGTCCCTCCCGG----GCCCCTGTGA---GCATC-TTACCGG-ACAGTGCTGGAT-TT-CCCA-G---C-TTGACTCTAACACTGTCTGGTAACGATGTTCAAAGGTGACCC---GC----------CG-CT |
| Gorilla_gorilla_1 | ggo-mir-200b:1-111 + | CGG----------------------------------------------------CCC----CC--------GGAC--CCAGCTCGG----GCAGCCGTGG---CCATC-TTACTGG-GCAGCATTGGAT-GG-AG--T----C-AGGTCTCTAATACTGCCTGGTAATGATGACGG-CGGAGCCCT---GCACGC-------A-GC |
| Homo_sapiens_1 | hsa-mir-141:1-95 + | CGG----------------------------------------------------CCG--------------G--------------------CCCTGGGT---CCATC-TTCCAGT-ACAGTGTTGGAT-GG-TCTA-ATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGCTC-CCGGGTGGG---T--------------TC |
| Homo_sapiens_5 | hsa-mir-200c:1-68 + | CCC-----------------------------------------------------------------------------------------------------TCGTC-TTACCCA-GCAGTGTTTGGGTGC-G----GTT-GGGAGTCTCTAATACTGCCGGGTAATGATGGAGG------------------------------ |
| Homo_sapiens_4 | hsa-mir-200a:1-90 + | CC-----------------------------------------------------------------------------------GG----GCCCCTGTGA---GCATC-TTACCGG-ACAGTGCTGGAT-TT-CCCA-G---C-TTGACTCTAACACTGTCTGGTAACGATGTTCAAAGGTGACC-----------------C-GC |
| Homo_sapiens_3 | hsa-mir-200b:1-95 + | CC------------------------------------------------------------------------------AGCTCGG----GCAGCCGTGG---CCATC-TTACTGG-GCAGCATTGGAT-GG-AG--T----C-AGGTCTCTAATACTGCCTGGTAATGATGACGG-CGGAGCCCT---GCACG------------ |
| Homo_sapiens_2 | hsa-mir-429:1-83 + | CGC----------------------------------------------------CGG--------------C----------------------CGATGG---GCGTC-TTACCAG-ACATGGTTAGAC-CT-GG--C----C-CTCTGTCTAATACTGTCTGGTAAAACCGTCCATCCGCT----------------------GC |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:9950403-9950531 - | CCAA-AG-------TCC-T-TT--GG-CAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTG-CCATTATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC----GGAGAA--TTT |
| D_simulans | chr2L:9739846-9739974 - | CTTA-AG-------TCC-T-TT--GG-CGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTG-CCATCATGGCCAACG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATC----GGAGGA--TTT |
| D_yakuba | chr2L:12640967-12641095 - | TCCA-AG-------TCC-T-TT--GG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CAATTATGGTCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATC----GGAGGA--TTT |
| D_eugracilis | scf7180000409554:4961907-4962035 + | TTTA-AG-------TCC-T-TT--AG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCATATTGGCCCAAG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATC----GAAGGA--TTT |
| D_elegans | scf7180000491186:3003977-3004106 - | AGC-----------TCC-T-TT--GG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCATATTGGCCTTCG-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATC----CAAAAAAGTGT |
| D_ananassae | scaffold_12916:13789760-13789886 - | TGA---A-------TCC-T-TTCAAG-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCGATATGGCACAGA-ATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC----AAAAGA--T-- |
| D_pseudoobscura | chr4_group3:220105-220226 + | TCCT-A---------CCGT-GT--GC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAG-CCATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC----AC--------- |
| D_persimilis | super_1:1694906-1695025 + | TCCT-A---------CCGT-GT--GC-TGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTAG-CCATAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTC--------------- |
| D_willistoni | scaffold_180708:12250833-12250971 - | CCAA-TCAAAATTAACA-T-TT--GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCAATTGTGATCTTCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATC----GTTGGA--ATA |
| D_virilis | scaffold_12723:3996238-3996344 + | CTA-----------TCC-C-TT--GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CAATTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT--------------------------- |
| D_grimshawi | scaffold_15252:3661296-3661426 - | TTA-----------TCC-T-TG--AC-CGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTA-CCATTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATCACTTGGTGGA--TAG |
| Caenorhabditis_elegans | cel-mir-87:1-94 + | GGTTGTG-------CCA-T-CC--GG-CCGCCTGATACTTT--CGTCTCAACCTCGCTG---------TCAGATTGGTCG-------TAGGTGAGCAAAGTTTCAGGTGTGCCGGAACACACC--------------------------C |
| Caenorhabditis_briggsae | cbr-mir-87:1-95 + | GGTTGTG-------C---CCACCCGG-CCGCCTGATACTTT--CGTCTCAACCTCGCTG---------TCAGAATG--------TCGTAGGTGAGCAAAGTTTCAGGTGTGCCGGAACACACCCA------------------------- |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:21472213-21472337 + | TTTCAGC-C------G---------AA--TATAAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCAT--TTCG-AATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----ATAAACAACT----------------------AAAATCTATAAA |
| D_simulans | chr3R:21300457-21300581 + | TTTCAGC-C------G---------AA--TAAAAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCAT--TTCG-AATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----ATAAACAACT----------------------AAAATCAATAAA |
| D_yakuba | chr3R:25001360-25001484 - | TTTCGTT-C------G---------AA--TATGAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCAT--TTTG-AATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----ATAAACAACT----------------------AAAATGCATTTT |
| D_eugracilis | scf7180000409682:1157943-1158071 - | TTTCAGC-C------G---------AA--TATGAA----------------------------------------TATGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCAT--TTTT-AATAAACATTGCACTTGTCCCGGCCTATGGGCGATTTGTA-----ATAATCGCCG-----TAAATATA-------------TCTATATA |
| D_elegans | scf7180000491280:3186428-3186546 + | TTTCTGG-G------G---------AA--TA--------------------------------------------TGTGAATTTCCCGTAGGACGGGAAGGTG-TCAACGTTTTGCAT--TATG-AATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTA-----A-AAACAACG-----T------G-----------GAT-AACAGA |
| D_ananassae | scaffold_13340:3727762-3727906 + | TTTCCAT-C------G---------AA--TAT-AA----------------------------------------TACAAATTTCCCGTAGGACGGGAAGGTG-TCAAGGTTTTGAAT--TA--AATTAAACATTGCACTTGTCCCGGCCTATGGGCGGTTTGTC-----AAACACATCGATACATATTTTTAGAAATATTTAAAATTTGGATA |
| D_pseudoobscura | chr2:23635253-23635419 - | CTTTA-----TATGC-------------------ATATCCTGTAGGACAAGACTACAGTACTACTCGGAATACCATAGAGATTGCCCGTAGGACGGGAAGGTG-TCAACGTTTTAAAT--TTTG-AACAAACATTGCACTTGTCCCGGCCTATGGGCGGCTTGTC-----ATACACATCGAT-CGTACAACTAG-------------CAACAAA |
| D_persimilis | super_3:6410293-6410459 - | CTTTA-----TATGC-------------------ATATCCTGTAGGACAAGACTACAGTACTACTCGGAATACCATAGAGATTGCCCGTAGGACGGGAAGGTG-TCAACGTTTTACAT--TTTG-AACAAACATTGCACTTGTCCCGGCCTATGGGCGGCTTGTC-----ATACACATCGAT-CGTACAACTAG-------------CAACAAA |
| D_willistoni | scaffold_181130:14578411-14578543 - | CTGTAGC-C------GGGTGAAAC-ATTATCTGCA----------------------------------------TTCAAATTTCTCGTAGGACGGGAAGGTG-TCAACGTTTTGCCT--TATGAATCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGTAA----AACGACATC-----------CTA---------------TCAAAA |
| D_virilis | scaffold_12855:6880771-6880902 + | CGACAAT-A------TGGCT-----------TTAT----------------------------------------CACAAACTGCTTGCAGGACGGGAAGGTG-TCAACGTTTTGCTT--TATGAATCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGTGCCACAACAAACGATT----G-----------------AAAATATGAAAA |
| D_grimshawi | scaffold_14906:3023231-3023367 + | TTTT----T-T--------------AA--TATATATATTCT-TAA-AC-------------------GTGTACC--ATAAATTGCTTGCAGGACGGGAAGGTG-TCAACGTTTTGCAT--TTTGAATCAAACATTGCACTTGTCCCGGCCTATGAGCGGTTTGTGC----ATCTACAACT------------GG--------------TTTAAA |
| Mus_musculus_1 | mmu-mir-92b:1-83 + | GGTGGGC-G-----------------------------------------------------------------------------GGAGGGACGGGACGTGGTGCAGTGTT--GTTCTTTCCCCTGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCTCG--------------------------------------------------- |
| Mus_musculus_3 | mmu-mir-25:1-84 + | GGCCAGT-G-TTGAG--------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGCTGC--CCTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------------------------------CCGGCC |
| Mus_musculus_2 | mmu-mir-92a-2:1-91 + | TGCCCATTCATCCAC--------------------------------------------------------------------------AGGTGGGGATTGGTGGCATTACT-TGTGT--TAGATATAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAA--G--------------------------------------------AGGGTT |
| Mus_musculus_4 | mmu-mir-92a-1:1-80 + | CTTT----C-TACAC--------------------------------------------------------------------------AGGTTGGGATTTGTCGCAATGCT--GTGTT-TCTCTGTATGGTATTGCACTTGTCCCGGCCTGTTGAGT--TTGG-------------------------------------------------- |
| Rattus_norvegicus_1 | rno-mir-92a-2:1-92 + | TGCCCATTCATCCAC--------------------------------------------------------------------------AGGTGGGGATTAGTGCCATTACT-TGTGT--TAGATAAAAAGTATTGCACTTGTCCCGGCCTGAGGAAGAAAAG---------------------------------------------AGGGTT |
| Rattus_norvegicus_4 | rno-mir-92b:1-83 + | GGTGGGC-A-----------------------------------------------------------------------------GGAGGGACGGGACGCGGTGCAGTGTT--GTTCTTTCCCCTGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCTCG--------------------------------------------------- |
| Rattus_norvegicus_2 | rno-mir-25:1-84 + | GGCCAGT-G-TTGAG--------------------------------------------------------------------------AGGCGGAGACACGGGCAATTGCT--GGACGCTGC--CCTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------------------------------CCGGCC |
| Rattus_norvegicus_3 | rno-mir-92a-1:1-78 + | CTTT----C-TACAC--------------------------------------------------------------------------AGGTTGGGATTTGTCGCAATGCT--GTGTT-TCT--GTATAGTATTGCACTTGTCCCGGCCTGTTGAGT--TTGG-------------------------------------------------- |
| Macaca_mulatta_1 | mml-mir-92b:1-96 + | CGGGC-------CCCGGGCG----G----------------------------------------------------------GCGGGAGGGACGGGACGCGGTGCAGTGTT--GTTCTTTCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCCCGGC-----------------------------------------------CC |
| Macaca_mulatta_2 | mml-mir-92a-1:1-78 + | CTTT----C-TACAC--------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTT-TCTG--TATGGTATTGCACTTGTCCCGGCCTGTTGAGT--TTGG-------------------------------------------------- |
| Macaca_mulatta_3 | mml-mir-25:1-84 + | GGCCAGT-G-TTGAG--------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGCTGC--CCTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------------------------------CCGGCC |
| Macaca_mulatta_4 | mml-mir-92a-2:1-75 + | TCAT-------CCCT--------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTGT--TCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA------------------------------------------------------- |
| Pongo_pygmaeus_4 | ppy-mir-92-2:1-75 + | TCAT-------CCCT--------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTGT--TCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA------------------------------------------------------- |
| Pongo_pygmaeus_2 | ppy-mir-92b:1-96 + | CGGGC-------CCCGGGCG----G----------------------------------------------------------GCGGGAGGGACGGGACGCGGTGCAGTGTT--GTTTTTTCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCTCCGGC-----------------------------------------------CC |
| Pongo_pygmaeus_3 | ppy-mir-92-1:1-78 + | CTTT----C-TACAC--------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTT-TCTG--TATGGTATTGCACTTGTCCCGGCCTGTTGAGT--TTGG-------------------------------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-25:1-84 + | GGCCAGT-G-TTGAG--------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGCTGC--CCTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------------------------------CCGGCC |
| Gorilla_gorilla_2 | ggo-mir-92-2:1-75 + | TCAT-------CCCT--------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTGT--TCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA------------------------------------------------------- |
| Gorilla_gorilla_3 | ggo-mir-92-1:1-78 + | CTTT----C-TACAC--------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTT-TCTG--TATGGTATTGCACTTGTCCCGGCCTGTTGAGT--TTGG-------------------------------------------------- |
| Gorilla_gorilla_4 | ggo-mir-92b:1-108 + | CCGGG------CCCCGGGCG----G----------------------------------------------------------GCGGGAGGGACGGGACGCGGTGCAGTGTT--GTTTTTTCCCCCGCCAATATTACACTCGTCCCGGCCTCCGGCCCCCCCGGC-----CCCCCGG-------------------------------CCTCCC |
| Gorilla_gorilla_1 | ggo-mir-25:1-84 + | GGCCAGT-G-TTGAG--------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGCTGC--CCTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------------------------------CCGGCC |
| Homo_sapiens_1 | hsa-mir-92b:1-96 + | CGGGC-------CCCGGGCG----G----------------------------------------------------------GCGGGAGGGACGGGACGCGGTGCAGTGTT--GTTTTTTCCCCCGCCAATATTGCACTCGTCCCGGCCTCCGGCCCCCCCGGC-----------------------------------------------CC |
| Homo_sapiens_4 | hsa-mir-92a-2:1-75 + | TCAT-------CCCT--------------------------------------------------------------------------GGGTGGGGATTTGTTGCATTACT-TGTGT--TCTATATAAAGTATTGCACTTGTCCCGGCCTGTGGAAGA------------------------------------------------------- |
| Homo_sapiens_3 | hsa-mir-92a-1:1-78 + | CTTT----C-TACAC--------------------------------------------------------------------------AGGTTGGGATCGGTTGCAATGCT--GTGTT-TCTG--TATGGTATTGCACTTGTCCCGGCCTGTTGAGT--TTGG-------------------------------------------------- |
| Homo_sapiens_2 | hsa-mir-25:1-84 + | GGCCAGT-G-TTGAG--------------------------------------------------------------------------AGGCGGAGACTTGGGCAATTGCT--GGACGCTGC--CCTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------------------------------CCGGCC |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3R:21477105-21477234 + | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCATTTT-C-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-ATG--AGTGTCGCAGTCGACGATCTACACAGTGCA |
| D_simulans | chr3R:21305387-21305516 + | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCCTTTT-C-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGTCGACGATCTACACAGTGCA |
| D_yakuba | chr3R:24996445-24996574 - | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCCTTTT-C-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGTCAGCGATCTGCACAGTGCG |
| D_eugracilis | scf7180000409682:1152385-1152514 - | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCTGTTT-G-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGTCAACGATCTACACGGCCAA |
| D_elegans | scf7180000491280:3191448-3191577 + | AG-----TG--C--AG-TG-----------GTACATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------T-GCTGTTT-G-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGGAGTCAACGATCTACACGTAGGG |
| D_ananassae | scaffold_13340:3732627-3732749 + | AG-----TG--C--AG-TG-----------AAGCATTA---AAACGTCACCTGATGTAGGCCGTGCCCGGTGCTTATTTGT--------T-ACT-TTT-G-GAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCAAAGGCAGCTATCTTCA------C |
| D_pseudoobscura | chr2:23630755-23630875 - | GT-----A---C--------AGTT-----GGAGCATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------C-GTTGTTT-G-AAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GAG--AGTGTCGCACACAAC----------GAGCT |
| D_persimilis | super_3:6405653-6405778 - | AG-----TG--C--AG-TACAGTT-----GGAGCATTA---AAACGTCACCTGATGTAGGCCGTGCCCAGTGCTTATTTGT--------C-GTTGTTT-G-AAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GAG--AGTGTCGCACACAAC----------GAGCT |
| D_willistoni | scaffold_181130:14574160-14574279 - | TGCG----GAA----A-TT--G--------TATCTTTAAAAATACGTCACATGATGTAGACCGTGCCTGGTGCTTATTTGT--------T-GCTATTT-A-AATATA-CAAATTGCACTAGTCCCGGCCTGCA-GTA--AGTGTCGCAAACAAC--------------- |
| D_virilis | scaffold_12855:6883792-6883910 + | AG-----TG--G--TG-TG-----------CAACATTA---AAACGTCACCTGATGTAGGTCGTGCCTGGTGCTTATTTGT--------T-GTTATGC-G-AAAATC-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAGCCAAC-----------GTTC |
| D_grimshawi | scaffold_14906:3026528-3026659 + | AG-----TG--A--TG-TG---GT-----GCAACATTA---AAACGTCACCTGATGTAGGTCGTGCCTGGTGCTTATTTGT--------T-GTTATGT-G-AAAATA-CAAATTGCACTAGTCCCGGCCTGCA-GTG--AGTGTCGCAAACAACAAACAACA-ACAGCA |
| Mus_musculus_1 | mmu-mir-92b:1-83 + | GG-----TG--G--GC-GG-----------GAGGGA-----------------------------------CGGGACGTGGTGCAGTGTT-GTTCTTT-C-CCCTGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--------------------------CTCG |
| Mus_musculus_3 | mmu-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Mus_musculus_2 | mmu-mir-92a-2:1-91 + | TGCCCATTC--ATCCAC---AGGT-----------------------------------------------GGGGATTGGTGGCATTACTTGTGT--TAGAT--ATAAAGTATTGCACTTGTCCCGGCCTGAG-GAAGA--AAG-------------------AGGGTT |
| Mus_musculus_4 | mmu-mir-92a-1:1-80 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATTTGTCGCAATGCT-GTGTTT-CTCT--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Rattus_norvegicus_1 | rno-mir-92a-2:1-92 + | TGCCCATTC--ATCCAC---AGGT-----------------------------------------------GGGGATTAGTGCCATTACTTGTGT--TAGAT--AAAAAGTATTGCACTTGTCCCGGCCTGAG-GAAGA--AAA------------------GAGGGTT |
| Rattus_norvegicus_4 | rno-mir-92b:1-83 + | GG-----TG--G--GC-AG-----------GAGGGA-----------------------------------CGGGACGCGGTGCAGTGTT-GTTCTTT-C-CCCTGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--------------------------CTCG |
| Rattus_norvegicus_2 | rno-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACACGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Rattus_norvegicus_3 | rno-mir-92a-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATTTGTCGCAATGCT-GTGTTT-C--T--GTATAGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Macaca_mulatta_1 | mml-mir-92b:1-96 + | CG-----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTCTTT-C-CCCCGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--CC--------------------CGGCCC |
| Macaca_mulatta_2 | mml-mir-92a-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Macaca_mulatta_3 | mml-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Macaca_mulatta_4 | mml-mir-92a-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Pongo_pygmaeus_4 | ppy-mir-92-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Pongo_pygmaeus_2 | ppy-mir-92b:1-96 + | CG-----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTTTTT-C-CCCCGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--TC--------------------CGGCCC |
| Pongo_pygmaeus_3 | ppy-mir-92-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Pongo_pygmaeus_1 | ppy-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Gorilla_gorilla_2 | ggo-mir-92-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Gorilla_gorilla_3 | ggo-mir-92-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Gorilla_gorilla_4 | ggo-mir-92b:1-108 + | CCG----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTTTTT-C-CCCCGCCAATATTACACTCGTCCCGGCCTCCG-GCCCC--CCCGGCCCCCC---------GGCCTCCC |
| Gorilla_gorilla_1 | ggo-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Homo_sapiens_1 | hsa-mir-92b:1-96 + | CG-----GG--C--CCC---GGGCGGGCGG--------GAGGGA---------------------------CGGGACGCGGTGCAGTGTT-GTTTTTT-C-CCCCGCCAATATTGCACTCGTCCCGGCCTCCG-GCCCC--CC--------------------CGGCCC |
| Homo_sapiens_4 | hsa-mir-92a-2:1-75 + | TC-----A----TCCCT---GGGT-----------------------------------------------GGGGATTTGTTGCATTACTTGTGT--TCTAT--ATAAAGTATTGCACTTGTCCCGGCCTGTG-GAAGA------------------------------ |
| Homo_sapiens_3 | hsa-mir-92a-1:1-78 + | CT-----TT--CTACAC---AGGT-----------------------------------------------TGGGATCGGTTGCAATGCT-GTGTTT-C--T--GTATGGTATTGCACTTGTCCCGGCCTGTT-GAG--TTTGG------------------------- |
| Homo_sapiens_2 | hsa-mir-25:1-84 + | GGCC----AGTGTTGAG---AGGC-----------------------------------------------GGAGACTTGGGCAATTGCT-GGACGCT--GCC--CTGGGCATTGCACTTGTCTCGGTCTGACAGTG--------------------------CCGGCC |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr3L:19558216-19558323 + | CTCT--ATA------TACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCTGCCCA--GCGAG--A |
| D_simulans | chr3L:18890412-18890519 + | CTCT--ATA------TACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCTGACCA--GCGAA--A |
| D_yakuba | chr3L:20989402-20989507 - | CTCT--A--------TACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCTGACCA--GCGAA--A |
| D_eugracilis | scf7180000409472:104906-105011 + | CTAT--A--------TACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCCGTCCA--GCGAA--A |
| D_elegans | scf7180000491249:6855005-6855110 + | CTCT--A--------TACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-TGTCTGTCCA--GCGAA--A |
| D_ananassae | scaffold_13337:17332424-17332537 - | ATCTT-A-TATA----ACACTATGGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCTGTCCA--GCGAA--A |
| D_pseudoobscura | chrXR_group8:7634812-7634919 + | TTCT--TCA------ATCA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCTGTCCA--GCGAA--A |
| D_persimilis | super_48:412952-413059 + | TTCT--TCA------ATCA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCTGTCCA--GCGAA--A |
| D_willistoni | scaffold_180727:842215-842322 + | CCCT--CGCA---TATACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAC--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-CGTCTGTTCA-----TC--A |
| D_virilis | scaffold_13049:13137002-13137114 + | CG--ACCAGCCAGGATACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-TGTCTGCTCA--ACGT---A |
| D_grimshawi | scaffold_15110:23882734-23882841 + | TGCC--GCA------TACA----GGGTGC----------TATGTTGTCTTTGGTTATCTAGCTGTA-TGAGTGA-TAA--ATAA-CGTCATAAAGCTAGCTTACCGAAGTTAATATT-AG-TGTCTCTTCA--ACGTA--A |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTA-------------------GACAT----------TCTCCGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGGTTTCTTTCATAAAGCTAGGTTACCAAAGCTCGGCG-------TCTT--GAT---CTA--C |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AG--A--------------------ACAT----------TCTCCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGAC-GTCTTCATAAAGCTAGGTTACCAAAGCTCGGCGT-TC-----------CAG-TTC--G |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GG--A-------------------GGCCC----------GTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CAC--AGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAAT-GACT-------------CTC--A |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G---------------------------------------TTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TAT--TG-GTCTTCATAAAGCTAGATAACCGAAAGTAAAAAC------------------------ |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CG--G-------------------GGTTG----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TGT--GGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAAT-AA-----------C---CCC--A |
| Rattus_norvegicus_1 | rno-mir-9b-1:1-108 + | GCGCA-G--------TGTA----TGGGGT---------TATTTTTACTTTCGGTTATCTAGCTTTA-TGAAGAC-TCC--ACACCACTCATACAGCTAGATAACCAAAGATAACAAC-CAAC-CCCGCCTC--C-TGG--C |
| Rattus_norvegicus_4 | rno-mir-9b-2:1-118 + | AGCA--C--------TCCT----CGGTGATCTTGAAGGAGTTTTTACTTTCGGTTATCTAGCTTTA-TGAAGA--CCA--AT-ACACTCATACAGCTAGATAACCAAAGATAACAACTCG-CTTCCCTCAC--AAGGCTGT |
| Rattus_norvegicus_5 | rno-mir-9a-2:1-87 + | GG--A-------------------AGCGA----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TAT--TG-GTCTTCATAAAGCTAGATAACCGAAAGTAAAAAC-TC-----------C---TTC--A |
| Rattus_norvegicus_2 | rno-mir-9b-3:1-115 + | GCAC--GCA--------GA----AGTTGT---TAGAGTCATTTCTACTTTCGGTTATCTAGCTTTA-TGACGGC-TCT--GTGGCACTCATACAGCTAGATAACCAAAGAGAGAAACGGG-CCTCCCATTC--GCCGG--C |
| Rattus_norvegicus_3 | rno-mir-9a-3:1-90 + | GG--A-------------------GGCCC----------GTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CAC--AGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAAT-GACT-------------CTA--A |
| Rattus_norvegicus_6 | rno-mir-9a-1:1-89 + | CG--G-------------------GGTTG----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TGT--GGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAAT-AA-----------C---CCC--A |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CG--G-------------------GGTTG----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TGT--GGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAAT-AA-----------C---CCC--A |
| Macaca_mulatta_2 | mml-mir-9-3:1-90 + | GG--A-------------------GGCCC----------GTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CAC--AGAGCCGCTCTCAAGCTAGATAACCGAAAGTAGAAAT-GACT-------------CTC--A |
| Macaca_mulatta_3 | mml-mir-9-2:1-87 + | GG--A-------------------AGCGA----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TAT--TG-GTCTTCATAAAGCTAGATAACCGAAAGTAAAAAC-TC-----------C---TTC--A |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GG--A-------------------AGTGA----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TAT--TG-GTCTTCATAAAGCTAGATAACCGAAAGTAAAAAC-TC-----------C---TTC--A |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CG--G-------------------GGTTG----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TGT--GGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAAT-AA-----------C---CCC--A |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GG--A-------------------GGCCC----------GTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CAC--AGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAAT-GACT-------------CTC--A |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GG--A-------------------AGCGA----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TAT--TG-GTCTTCATAAAGCTAGATAACCGAAAGTAAAAAC-TC-----------C---TTC--A |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GG--A-------------------AGCGA----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTG--TAT--TG-GTCTTCATAAAGCTAGATAACCGAAAGTAAAAAC-TC-----------C---TTC--A |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CG--G-------------------GGTTG----------GTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGG-TGT--GGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAAT-AA-----------C---CCC--A |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GG--A-------------------GGCCC----------GTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGC-CAC--AGAGCCGTCATAAAGCTAGATAACCGAAAGTAGAAAT-GATT-------------CTC--A |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16698729-16698849 + | TGT--TGCTCTT-----------TTGT--TTGCATATTA-TTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTT-TATG-TATA---TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTCTGC-ATTAT---GTTTGAGTT--GA |
| D_simulans | vom21g07.g1:730-849 + | TGT--TGCTCTT-----------TTGT--TTGCATATTA-TTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTA-TAAG-T--A---TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTCTGC-ATTAT---GCTTGAGTT--GA |
| D_yakuba | chr2R:4404225-4404345 - | GGT--TGCTCTT-----------TTGT--TTGCATATTA-TTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTG-TTTA-TGTG---TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTCTGC-ATTAT---GCTTGAGTT--GA |
| D_eugracilis | scf7180000408961:272643-272761 + | AGT--TGCCTTT-----------TTGT--TTGCATATTA-TTTGTTCTTTGGTGATTTTAGCTGT-ATGGTTGT-TT-TTA-AT---ATCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGC-GTTAT---TCTTGAGTT--G- |
| D_elegans | scf7180000490579:645222-645340 - | AGT--TCTTCTT-----------TTGT--TTGCATATTA-TTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTG-TCT--A-AG---TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGC-ATTAT---GCTTAGTTT--GT |
| D_ananassae | scaffold_12916:15864526-15864643 - | AGT--TGCTCTT-----------TTGT--TTGCACATTA-TTTGTTCTTTGGTGATTTTAGCTGT-ATGGT-GT-CTCA-T--A---TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGC-ATTTT---TTCTGAGTT--GC |
| D_pseudoobscura | chr4_group3:8444179-8444302 + | AGT--TGATCTT-----------TTGT--TTGCACATTA-TTTGATCTTTGGTGATTTTAGCTGT-ATGGTGTA-TATC-AAAG---ATCCATAGAGCTTTATCACCAAAACCCAAAT-GGTTTTTGC-ATTTTTTCGCTTGAGTT--GC |
| D_persimilis | super_1:9895298-9895421 + | AGT--TGATCTT-----------TTGT--TTGCACATTA-TTTGATCTTTGGTGATTTTAGCTGT-ATGGTGTA-TATC-AAAG---ATCCATAGAGCTTTATCACCAAAACCCAAAT-GGTTTTTGC-ATTTTTTCGCTTGAGTT--GC |
| D_willistoni | scaffold_181132:873333-873452 - | ATT--GATTTTG-----------ATTT--TCGCATATTA-TTTGGTCTTTGGTGATTTTAGCTGT-ATGGTGTA-TGAG-CATA---ATCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGC-ATTTT---GCTTGAGTT--G- |
| D_virilis | scaffold_12963:12862857-12862965 - | TGT--TGCCTTT-----------TTAT-TTTGCATATTA-TTTGCTCTTTGGTGATTTTAGCTGT-ATGGTGTG-CGCG-TA-----TTCCATAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGC-ATT----------------GC |
| D_grimshawi | scaffold_14978:831270-831399 + | TGC--TGCCCTTTGTTTGCCCTTTTGAGTTTGCATATTA-TTTGCTCTTTGGTGATTTTAGCTCT-ATGGTGTG-CGCA-TA-----ATCCACAGAGCTTTATTACCAAAAACCAAAT-GGTTTTTGC-ATT-T---GCTTTC---TTTT |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTAG---------------------------ACATTC-TCCGATCTTTGGTGAT-TCAGCTTCAATGATTGGCTACA-G-GTTTCTTTCATAAAGCTAGGTTACCAAAGCTCGGCGT-------------------CTTGAT--CTAC |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AGA--A----------------------------CATTC-TCCGATCTTTGGTGAT-TCAGCTTAAATGATAGA-ATTC-AGACGT-CTTCATAAAGCTAGGTTACCAAAGCTCGGCGTTC-------C-------------AG--TTCG |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GGA--GGCC----------------------------CGTTTCTCTCTTTGGTTAT-CTAGCTGT-ATGAGTGC-CACA-GAGC---CGTCATAAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------CTCA |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G--------------------------------------TTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGT-ATT--G-GT---CTTCATAAAGCTAGATAACCGAAAGTAAAAAC------------------------------- |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CGG--GGTT----------------------------GGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGG-TGTG-GAGT---CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-------C-----------------CCCA |
| Rattus_norvegicus_1 | rno-mir-9b-1:1-108 + | GCG--CAGTGTA-----------------TGG--GGTTATTTTTACTTTCGGTTAT-CTAGCTTT-ATGAAGAC-TCCA-CACC---ACTCATACAGCTAGATAACCAAAGATAACAACCAACCCCGC-CTC-----------CTG--GC |
| Rattus_norvegicus_4 | rno-mir-9b-2:1-118 + | AGC--ACTCCTCGGTGATC----------TTGAAG-GAGTTTTTACTTTCGGTTAT-CTAGCTTT-ATGAAGAC-CAA--T-AC---ACTCATACAGCTAGATAACCAAAGATAACAACTC-GCTTC-CCTC------ACAAGGCT--GT |
| Rattus_norvegicus_5 | rno-mir-9a-2:1-87 + | GGA--AGCG----------------------------AGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGT-ATT--G-GT---CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-------C-----------------TTCA |
| Rattus_norvegicus_2 | rno-mir-9b-3:1-115 + | GCA--CGCAGAA-G---------TTGT--TAG--AGTCATTTCTACTTTCGGTTAT-CTAGCTTT-ATGACGGC-TCTG-TGGC---ACTCATACAGCTAGATAACCAAAGAGAGAAACGGGCCTCCC-ATTCG---------CCG--GC |
| Rattus_norvegicus_3 | rno-mir-9a-3:1-90 + | GGA--GGCC----------------------------CGTTTCTCTCTTTGGTTAT-CTAGCTGT-ATGAGTGC-CACA-GAGC---CGTCATAAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------CTAA |
| Rattus_norvegicus_6 | rno-mir-9a-1:1-89 + | CGG--GGTT----------------------------GGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGG-TGTG-GAGT---CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-------C-----------------CCCA |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CGG--GGTT----------------------------GGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGG-TGTG-GAGT---CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-------C-----------------CCCA |
| Macaca_mulatta_2 | mml-mir-9-3:1-90 + | GGA--GGCC----------------------------CGTTTCTCTCTTTGGTTAT-CTAGCTGT-ATGAGTGC-CACA-GAGC---CGCTCTCAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------CTCA |
| Macaca_mulatta_3 | mml-mir-9-2:1-87 + | GGA--AGCG----------------------------AGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGT-ATT--G-GT---CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-------C-----------------TTCA |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GGA--AGTG----------------------------AGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGT-ATT--G-GT---CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-------C-----------------TTCA |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CGG--GGTT----------------------------GGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGG-TGTG-GAGT---CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-------C-----------------CCCA |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GGA--GGCC----------------------------CGTTTCTCTCTTTGGTTAT-CTAGCTGT-ATGAGTGC-CACA-GAGC---CGTCATAAAGCTAGATAACCGAAAGTAGAAATGACT-----------------------CTCA |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GGA--AGCG----------------------------AGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGT-ATT--G-GT---CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-------C-----------------TTCA |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GGA--AGCG----------------------------AGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGT-ATT--G-GT---CTTCATAAAGCTAGATAACCGAAAGTAAAAACTC-------C-----------------TTCA |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CGG--GGTT----------------------------GGTTGTTATCTTTGGTTAT-CTAGCTGT-ATGAGTGG-TGTG-GAGT---CTTCATAAAGCTAGATAACCGAAAGTAAAAATAA-------C-----------------CCCA |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GGA--GGCC----------------------------CGTTTCTCTCTTTGGTTAT-CTAGCTGT-ATGAGTGC-CACA-GAGC---CGTCATAAAGCTAGATAACCGAAAGTAGAAATGATT-----------------------CTCA |
| Species | Coordinate | Alignment |
|---|---|---|
| D_melanogaster | chr2L:16697909-16698030 + | CT--TG----------------------------CACTA---TTTA--------------TC--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTCACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTAA-CA---------------------------------------------------T-----------GATAT-- |
| D_simulans | zdv96e12.b1:15-131 + | CT--TG----------------------------CACTA---TTTA--------------TC--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTCACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTA---------------------------------------------------------------------ACA-- |
| D_yakuba | chr2R:4405017-4405183 - | CT--TG----------------------------CACTA---TTTA--------------TC--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTCGCGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTAA-CAGCGCACCA--ACCA---------------AAAACAGCCACAAATACAGGAATGATTAAAAATATCTTT-- |
| D_eugracilis | scf7180000408961:271824-271982 + | CT--TG----------------------------CACTA---TTTA--------------TC--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTCACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATAGC------TTAAGCAACGCACCAGAAACA---------------ACAACAGCCACAAATTCAGGAATG-----------ATAT-- |
| D_elegans | scf7180000490579:646025-646202 - | CT--CG----------------------------CACTA---TTTA--------------TC--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTCACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTAA-CAACGCACCAGCAACAAAAAAAAAACAAAAAACAACAGCCACAAAAACTGGAATGA------CT--TTAAGT |
| D_ananassae | scaffold_12916:15865465-15865583 - | CA--CG----------------------------CACTCCCTTTCA--------------TT--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTCACGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTA---------------------------------------------------------------------ACA-- |
| D_pseudoobscura | chr4_group3:8443145-8443295 + | CT--CT-CCCATTCGCTGTCTGTCGACTTCCATGCACTT---TTTGTTCTCCTT------TA--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTTTTGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTA---------------------------------------------------------------------ACA-- |
| D_persimilis | super_1:9894267-9894417 + | CT--CT-CCCATTCGCTGTCTGCCGCCTTCCATGCACTT---TTTGTTCTCCTT------TA--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTTTTGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTA---------------------------------------------------------------------ACA-- |
| D_willistoni | scaffold_181061:30518-30658 - | CC--TCCCCTCTTCACCATC------------------T---TTTCCTCTCCCTCCATCATC--------ATTTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTTTTGCACATTGTATATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTG---------------------------------------------------------------------CCA-- |
| D_virilis | scaffold_12963:12863840-12863951 - | CA--CA----------------------------CACAA---TTT---------------TC--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTT---TACAGTTTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTG---------------------------------------------------------------------CCA-- |
| D_grimshawi | scaffold_14978:830199-830317 + | AT--TG----------------------------CAATT---TCTT--------------TC--------A-TTTTT----GCTGT-TTCTTTGGTATTCTAGCTGTA--GATTG-----------TTTCT---ATATCTTGTATCATCTAAAGCTTTTATACCAAAGCTCCAGCTTAAATTGC------TTGC-CAC--------------------------------------------------------------CGCCT-- |
| Caenorhabditis_elegans | cel-mir-79:1-98 + | TAGTAG-----------------------------------------------------------------------ACATTCTCCGATCTTTGGTGATTCAGCTTCAATGATTGGCTACAGGTTTC---------------TTTCA--TAAAGCTAGGTTACCAAAGCT-----CGGCGT-C-------TT------------------------------------------------------------------GATCTAC-- |
| Caenorhabditis_briggsae | cbr-mir-79:1-93 + | AG--AA-----------------------------------------------------------------------C-ATTCTCCGATCTTTGGTGATTCAGCTTAAATGATAGAATTCAGACGT----------------CTTCA--TAAAGCTAGGTTACCAAAGCT-----CGGCGT-TC------CA--------------------------------------------------------------------GTTCG-- |
| Mus_musculus_1 | mmu-mir-9-3:1-90 + | GG--AG-----------------------------------------------------------------------GCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCC-ACAGA-GC----------------CGTCA--TAAAGCTAGATAACCGAAAGT-----AGAAAT-GA------CT---------------------------------------------------------------------CTCA-- |
| Mus_musculus_3 | mmu-mir-9-2:1-72 + | G---------------------------------------------------------------------------------TTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTA-TTG---GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAC-------------------------------------------------------------------------------------- |
| Mus_musculus_2 | mmu-mir-9-1:1-89 + | CG--GG-----------------------------------------------------------------------GTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGT-GTGGA-GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAT-AA----------------------------------------------------------------------------CCCCA-- |
| Rattus_norvegicus_1 | rno-mir-9b-1:1-108 + | GC--GC-----------------------------AGTG---TATG--------------G----------------GGTTATTTTTACTTTCGGTTATCTAGCTTTA-TGAAGACT-CCACA-CC----------------ACTCA--TACAGCTAGATAACCAAAGAT-----AACAAC-CA------AC-------------------------------------------CCCGC-----------------CTCCTGGC-- |
| Rattus_norvegicus_4 | rno-mir-9b-2:1-118 + | AG--CA------------------------------CTC---CTCG--------------GTGATCTTGA-------AGGAGTTTTTACTTTCGGTTATCTAGCTTTA-TGAAGACC-AAT---AC----------------ACTCA--TACAGCTAGATAACCAAAGAT-----AACAAC-TCGCTTCCCTC------------------------------------------------ACAA---G-----------GCTGT-- |
| Rattus_norvegicus_5 | rno-mir-9a-2:1-87 + | GG--AA-----------------------------------------------------------------------GCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTA-TTG---GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAC-TC----------------------------------------------------------------------------CTTCA-- |
| Rattus_norvegicus_2 | rno-mir-9b-3:1-115 + | GC--AC--G-------------------------CAGAA---GTTG--------------TT------AG-------AGTCATTTCTACTTTCGGTTATCTAGCTTTA-TGACGGCT-CTGTG-GC----------------ACTCA--TACAGCTAGATAACCAAAGAG-----AGAAAC-GGGC----CTC---------------------------------------------CC-AT--------------TCGCCGGC-- |
| Rattus_norvegicus_3 | rno-mir-9a-3:1-90 + | GG--AG-----------------------------------------------------------------------GCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCC-ACAGA-GC----------------CGTCA--TAAAGCTAGATAACCGAAAGT-----AGAAAT-GA------CT---------------------------------------------------------------------CTAA-- |
| Rattus_norvegicus_6 | rno-mir-9a-1:1-89 + | CG--GG-----------------------------------------------------------------------GTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGT-GTGGA-GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAT-AA----------------------------------------------------------------------------CCCCA-- |
| Macaca_mulatta_1 | mml-mir-9-1:1-89 + | CG--GG-----------------------------------------------------------------------GTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGT-GTGGA-GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAT-AA----------------------------------------------------------------------------CCCCA-- |
| Macaca_mulatta_2 | mml-mir-9-3:1-90 + | GG--AG-----------------------------------------------------------------------GCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCC-ACAGA-GC----------------CGCTC--TCAAGCTAGATAACCGAAAGT-----AGAAAT-GA------CT---------------------------------------------------------------------CTCA-- |
| Macaca_mulatta_3 | mml-mir-9-2:1-87 + | GG--AA-----------------------------------------------------------------------GCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTA-TTG---GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAC-TC----------------------------------------------------------------------------CTTCA-- |
| Pongo_pygmaeus_2 | ppy-mir-9-2:1-87 + | GG--AA-----------------------------------------------------------------------GTGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTA-TTG---GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAC-TC----------------------------------------------------------------------------CTTCA-- |
| Pongo_pygmaeus_3 | ppy-mir-9-1:1-89 + | CG--GG-----------------------------------------------------------------------GTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGT-GTGGA-GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAT-AA----------------------------------------------------------------------------CCCCA-- |
| Pongo_pygmaeus_1 | ppy-mir-9-3:1-90 + | GG--AG-----------------------------------------------------------------------GCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCC-ACAGA-GC----------------CGTCA--TAAAGCTAGATAACCGAAAGT-----AGAAAT-GA------CT---------------------------------------------------------------------CTCA-- |
| Gorilla_gorilla | ggo-mir-9:1-87 + | GG--AA-----------------------------------------------------------------------GCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTA-TTG---GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAC-TC----------------------------------------------------------------------------CTTCA-- |
| Homo_sapiens_1 | hsa-mir-9-2:1-87 + | GG--AA-----------------------------------------------------------------------GCGAGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGTA-TTG---GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAC-TC----------------------------------------------------------------------------CTTCA-- |
| Homo_sapiens_3 | hsa-mir-9-1:1-89 + | CG--GG-----------------------------------------------------------------------GTTGGTTGTTATCTTTGGTTATCTAGCTGTA-TGAGTGGT-GTGGA-GT----------------CTTCA--TAAAGCTAGATAACCGAAAGT-----AAAAAT-AA----------------------------------------------------------------------------CCCCA-- |
| Homo_sapiens_2 | hsa-mir-9-3:1-90 + | GG--AG-----------------------------------------------------------------------GCCCGTTTCTCTCTTTGGTTATCTAGCTGTA-TGAGTGCC-ACAGA-GC----------------CGTCA--TAAAGCTAGATAACCGAAAGT-----AGAAAT-GA------TT---------------------------------------------------------------------CTCA-- |