dme-mir-994
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr3R | 15159346 | G | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.304 | 0.696 | 23 | Genomic Error | Loop |
Corrected Alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr3R:6233844-6233964 + | C--------------GC------GTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--CCAA--GAA-TTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAACAG-----CCTAGATC---C |
| droSim1 | chr3R:15159284-15159404 - | C--------------GC------GTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--CCAT--GAA-TTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTAGATC---C |
| droSec1 | super_0:15709450-15709570 - | C--------------GC------GTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--CCAT--GAT-TTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTAGATC---C |
| droYak2 | chr3R:10262359-10262479 + | C--------------GC------GTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--CCAA--GAA-TTTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTAGTTC---C |
| droEre2 | scaffold_4770:15384035-15384155 - | C--------------GC------GTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--CCAT--GAA-TTGTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTAGTTC---C |
| droAna3 | scaffold_13340:867356-867469 - | -----------------------------GATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--CCTC--GAAGTCATTCCCATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTAGATT---T |
| dp4 | chr2:7233487-7233613 - | T--------------GTCGCGTTGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTAAC--ATAC--AAA-TCCTTTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTAGATC---G |
| droPer1 | super_0:1094175-1094302 - | T--------------GTCGCGTTGTCCTGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTAAC--ATAA-CAAA-TCCTTTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTAGATC---G |
| droWil1 | scaffold_181108:495-611 + | C--------------G--------ACATGAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAATTATTC--AAA-TCTTTGACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCTA-------- |
| droVir3 | scaffold_13047:1194160-1194276 + | C------------CAGC------GATTTTGATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--ATTA--GAA-GCTTTCACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCT--------- |
| droMoj3 | scaffold_6540:5225156-5225284 + | AGGTCTAACGTTGAAGC------GATATCAATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--ATTT--CAA-CCTATTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAG-----CCT--------- |
| droGri2 | scaffold_14906:5077444-5077577 - | G--------------ATGACAATGATTTACATTTATATCGAGTTATCTAAGGAAATAGTAGCCGTGATTTTAC--ATTTGAAAC-TCTCTTACATATCACAGTTGCTGTTTCTTTTAGATAGCTCTTTTGTAAGCAACAAACCCTAACTC---C |