dme-mir-974

This miRNA belongs to the mir-972-979 cluster.
Changes
- Resequencing of the yakuba gap within this clustered confirmed that the mir-973 & mir-974 orthologs are not missing (see below for dya-mir-974).
- The grimshawi ortholog may also be lost since it is missing from several miRNAs within this cluster.

Corrected Alignment

dme-mir-974

Species	Coordinate	Alignment
dm3	chrX:19445696-19445826 +	AGG---------------TCCAG-G---TAAG----------------------CTCAATTGT-------CACCGGTCATGTCCTCCAAGCGAGCAAAGAAGTAGTATTTGTGTTT---C--CA---AGAGCAAATATAACTTCATTGGAA-GCTAAGTGGATTTGCCCA-------AATCA---------------GCTTGG--T------------ATTT--------------------------------------------------------AT
droSim1	chrX:15011423-15011546 +	G---------------TAAA----------------------------------CTCAATTGT-------CACTGGTCGTGTCCTCCAAGCGAGCAAAGAAGTGGTATTTGCGTTT---C--CA---AGAACAAATATAACTTCTTTGAAA-GCTAGGTGGATTTGCCCA-------AGTCA---------------CCTTGG--T------------ATTT--------------------------------------------------------AT
droSec1	super_8:1728102-1728227 +	AGGTA-----AA------------------------------------------CTCGATTGT-------CACTGGTCGTGTCCTCCAAGCGAGCAAAGAAGTAGTATTTGCGTTT---C--CA---AGAACAAATATAACTTCTTTGAAA-GCTAGGTGGATTTGCCCA-------AGTCT---------------CCTTGG--T------------ATTT--------------------------------------------------------AT
droYak2	Unknown	G---------------AAAACAG-A---ACCA----------------------CTGACTTAG-------CACTGGTCATGGCCTCCAAGCGAGCAAAGAAGTAGTATTTGTGTTC---C--AA---AAGTCAAATATAACTTTTTTGGAA-GCTACGGGGACTTGTCCA-------AGACA---------------GC---------------------------------------------------------------------------------
droEre2	scaffold_4690:9682437-9682562 +	G---------------AAAACAG-A---ACCA----------------------CTAACTCAG-------CACTGGGCATGTCCTCCAAGCGAGCAAAGAAGTAGTATTTGTGTTC---C--AA---AAGTCAAATATAACTTTTTTGGAA-GCTACGGGGATTTGCCCA-------AGCCA---------------ACTTGC--T------------G-------------------------------------------------------------
droAna3	scaffold_13417:2478487-2478598 -	GGT---------------TGCA----------------------ATCC-------TGGCTTGG-------GGTAGGTCATCTCCTCTAAGCGAGCAAAGAAGTAGTATTTGTTTG-C-TTTTAA---TGGTCAAATATAACTTTTTTGGAA-GCTACGAGGAGTTGTCC---------------------------------------------------------------------------------------------------------------
dp4	Unknown	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer1	Unknown	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil1	scaffold_181096:7946609-7946719 +	ATTCAT---T-------------------------------------------------TTTC-------CAATGGCCATATCCTCTAAGCGAGCAAGAAAGTGGTATTTGTCTTT-----GGA---AATTCAAATATAACTTTTTTGGAA-GCTACAAGGCAATGTCCA------CAATCA---------------AC---------------------------------------------------------------------------------
droVir3	scaffold_13042:917533-917679 -	ATCCG-----AA------TATG-AG--ATTTA----------------------CCAATTATT-------AACTGGGCATTCCCTCTGAGCGAGCAGAGAAGTATTATTTGCGTG-AATC--TG---ATATCAAATAAGACTTTTTTGGTTCGCTATGAGGTATTGTTCA------TA----AATAAACACG-----TCTGCC--T------------ATAT--------------------------------------------------------AC
droMoj3	scaffold_6328:2908489-2908614 -	T---------------CAATCAG---------------------------------------A-------CGCTGGGCATTCCCTCTGAGCGAGCAGAGAAGTATTTTT-GCGTG-CATC--TG---ATATCAAATAAAACTTTTTTGGTT-GCTGCGAGGTATTGTTGA-------AA---TGTAAACGTT-----GCTCGC--T------------CTCT--------------------------------------------------------AC
droGri2	scaffold_15081:2051206-2051247 -	C---------------A-------------------------------------------------------AAGGACATCTTCTGTAAGCGAGCAAAAATATAATATTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------