dme-mir-959

No changes

This miRNA belongs to the 959-964 cluster
This miRNA appears confidently lost from the 3 Drosophila group species.
- The D. virilis ortholog could not be found by searching D. virilus trace data nor the D. virilus assembly.
- It should be noted that the adjacent miRNA in this cluster, dme-mir-960, has confident mojavensis and grimshawi ortholog but missing virilis ortholog.

dme-mir-959

Species	Coordinate	Alignment
dm3	chr2L:5640925-5641052 +	CGA-ATTAAATTGATTTTAACT---------------------------------TTGTTCTATATTCTTAGTACTCGGGTTGATAAAGACCT---TTTCTT----CAGGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAACTGCAATGAT------------TATCG----------------------------------
droSim1	chr2L:5434012-5434138 +	AA---TTAAATAGATTTTAACT---------------------------------TTGTTCTATATTCTTAGTACTCGGGTTGATAAAGACCT---TTTCTT----TGCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCAAGGAT------------CATCG----------------------------------
droSec1	super_5:3718667-3718793 +	AA---TTAAATAGATTTTAACT---------------------------------TTGTTCTATATTCTTAGTACTCGGGTTGATAAAGACCT---TTTCTT----TGCGGAGCCTTTGTCATCGGGGGTATTATGAAATATAGTTTAAAGAAGCTGCAAGGAT------------CATCG----------------------------------
droYak2	chr2L:13552255-13552381 -	CGA-GTTAAATTGATTTTAACT---------------------------------TTGTTCTATATTCTTAGTACTCGGGTTGACAAAGACCT---TTCC-T----TGCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAAGGAT------------CATCG----------------------------------
droEre2	scaffold_4929:5729400-5729526 +	CGA-GTTAAATTGATTTTAACT---------------------------------TTGTTCTATATTCTTAGTACTCGGGTTGACAAAGAGCT---TTCC-T----TGCGGCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAGAAACTGCAAGGAG------------CAACG----------------------------------
droAna3	scaffold_12916:11084702-11084849 +	GAA-GTTAAATTTATTTCAATT---------------------------------TTGTTCTATATTCTTAGTACTCGGGTTGATAAAGACCT---TTCC-T----GGAGCCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAAACCAGCACAATG------------TATCGGCCAATAGGCCAATTAACCCG-------------
dp4	chr4_group4:3182582-3182745 -	TGG-TTTTCGTTTA----CGTT--------------------TTTT-TTTTGTTTTGGTTCTATGTTCTTAGTACTTGGGTTGATAAAGACCA---CTCG-TAGTGTGAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACACA-------------AAA--------AATATACACGTAAATGTGTGTGG
droPer1	super_10:2201518-2201669 -	TGG-TTTTCGTTCA----CGTT--------------------TTTTTTTTTGTTTTGGTTCTATGTTCTTAGTACTTGGGTTGATAAAGACCA---CTCG-TAGTGTGAGAAGCCTTTGTCATCGCGGGTATTATGCAACATAGCTCAAAAGCGCAACAAAATACACA-------------AAA--------AATATACACG-------------
droWil1	scaffold_180708:8626283-8626424 -	AGT-GAAAAAGTGACTTAAGTT---------------------------------TTGTTCTATATTCTTAGTACTCGGGTTGATAAAGACAAAATGTTT-A----CCAATCGCCTTTGTCATCGGGGGTATTATGAAATATAGCTCAAAAGTTCAACATAATAATTAAGAATTAACTTTG----------------------------------
droVir3	Unknown	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3	scaffold_6500:14018136-14018207 +	TGATGTAATAAGTGTTTTAGCT---------------------------------TTAAGTTGTGCCATTT---------------------------------------------------------------TAAATTGAAAAA-AGTGAAGATTGAAAATT------------GACTA----------------------------------
droGri2	scaffold_15252:3146904-3147001 +	CAA-AGAGTAGCAGGAGTAGTTAAGTTGTAGTTTCTTACGGTTTTTTTTTT-----AATAACATGC-TTTAGTGCT-------------------------------------------------------TCAATGTAGGTGGCTCAAGATAT---------T------------TGTTG----------------------------------