dme-mir-957

dme-mir-957

Changes

In the miR* region of virilis through grimshawi, the 'A' substitution is supported by all trace reads

Species

Chrom

Pos

Ref base

Type

A

C

G

T

RNAseq Total

A

C

G

T

Trace Total

Decision

Partition

droSim1

chr3L

21812399

T

3

0

0

0

0

3

0.133

0.667

0

0.2

15

Genomic Error

miR*

Corrected Alignment

dme-mir-957

Species	Coordinate	Alignment
dm3	chr3L:22511281-22511406 -	TTATA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGCGAGCATCTA----TCCAA--------A
droSim1	chr3L:21812307-21812432 -	TTGTA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----TCCAA--------A
droSec1	super_11:2446955-2447080 -	TTGTA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----TCCAA--------A
droYak2	chr3L:22973852-22973977 -	TCATA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-ATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCAACTA----TCCAA--------A
droEre2	scaffold_4784:22180738-22180863 -	CCATA--TCCG----T--AG------------TGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATCTA----TCCAA--------A
droAna3	scaffold_13337:22247678-22247807 -	TAAGA--TTCG----T--AATATAGTAATATATACTGCCTACAATGGCCCTTAGTTTTCGACGTGTTTTGGTGTGCAGGGG-AG--TT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GAGGCGTGAGCATC--------------------
dp4	chrXR_group8:186470-186597 -	ACC---C----ACCAGTAAA------------TACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TTGATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTA----ACCAA--------A
droPer1	super_80:80367-80497 +	ACAACCC----ACCAGAATA------------TACTGTCCACAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGG-AG--TTGATATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGT-GCGGCATGAGCATCTA----ACCAA--------A
droWil1	scaffold_180698:7262478-7262610 +	TCT---CT---CGCAT--CA------------TA-TATCCGCAATGGACCTTAGTTTTCGACGTGTTTTGGTGTGCTTAGGAAGTTTT-CTATTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGTTGTGATAGAAGCAACCATGAAAACAA--------A
droVir3	scaffold_13049:17242400-17242523 +	TTATT--TCCTAAC--TAGA------------TAATGCCCACAATGGTTCTTAGTTTTAGACGTGTTTTGGTGTGCTTG-A-AG--TT-TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCGATTGT-GAGGTAAAAGCGTCCA----A-------------
droMoj3	scaffold_6680:22273688-22273794 +	-----------------------------------TGCCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AG--TT-TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GAGGCGAAAGCATCCA----G-------------
droGri2	scaffold_15110:14942014-14942124 -	T-----------------------------------ACCCACAATGGATCTTAGTTTTAGACGTGTTTTGGTGTGCTTGGG-AG--TT-TTGTTCCGATTGAAACCGTCCAAAACTGAGGCCAATTGT-GTGGTAAAAGCATCCA----AATAT--------C