dme-mir-310
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr2R | 15132610 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0.625 | 0 | 0.375 | 8 | Genomic error |
miR* |
Corrected Alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr2R:16471242-16471360 - | AAAAGTGTTTG-C--G----------A-----------------------AAACATAAACATTTGC-AGGGC-GGG-TCGTGTGTCAGTGTATTT-------ATATCTT-------------A---------G-CTATATTGCACACTTCCCGGCCTTTAAATGTCCAAT----GT-TTCAAC-AT-------------TTAAATCT------ |
| droSim1 | chr2R:15132542-15132660 - | AAAAGTGCTTG-C--A----------A-----------------------AAACATAAACATTTGC-AGGAC-GGG-TCGTGTGTCAGTGTATTT-------ACTTCTT-------------A---------G-CTATATTGCACACTTCCCGGCCTTTAAATGTCCAAT----GT-TTCAAC-TT-------------TAATATCT------ |
| droSec1 | super_1:14025465-14025583 - | AAAAGTGCTTG-C--A----------A-----------------------AAACATAAACATTTGC-AGGAC-GGG-TCGTGTGTCAGTGTATTT-------ACTTCTT-------------A---------A-CTATATTGCACACTTCCCGGCCTTTAAATGTCCAAT----GT-TTCAAC-TT-------------TAATATCT------ |
| droYak2 | chr2R:12724925-12725037 + | CT-------TG-C--A----------A-----------------------ATACACAAACATTTGC-AGGAC-GGG-TCGTGTGGCAGTGTATTG-------ATTTCTT-------------A---------G-CTATATTGCACACTTCCCGCCCTTTAAATGTCCAGT----GT-TTCGAC-TT-------------GGATATCT------ |
| droEre2 | scaffold_4845:10616419-10616531 - | CT-------TG-C--A----------A-----------------------ATACACAAATATTTGC-AGGAC-GGG-TCGTGTGTCAATGTATTG-------ATCTCTT-------------A---------G-CTATATTGCACACTTCCCGCCCTTTAAATGTCCAGT----GT-TTCAAC-TT-------------GAATATCT------ |
| droAna3 | scaffold_13266:4133041-4133158 + | AATAGC--------------------A-----------------------AAACATAAACACTTGC-AGGAC-GGG-GAGCGTGACAATATATAT-------ATTTTAT--A---------AA---------C-ATATATTGCACACCTCCCGGCCTATAAGTGTA-AAT----GT-TCCTAC-AG----GTA------AAACTTCTAA---- |
| dp4 | chr3:8679992-8680133 + | ATTATAGTGTG-CGGA----GT----ATGTGCTGTGTAT---------TTGTACACCAACATTTGT-GCGTCTAAG-ATCTGTG-CAGTATATACATACATA-GAA-TA-------------C---------A-AAATATTGCAGACTTCTCAGACTACAAATGTGAACT----GT-CTGGTC-TT-------------CAAAAAAT------ |
| droPer1 | super_4:2566796-2566912 + | CTGTGCATTT----------------------------------------GTACACCAACATTTGT-TCGTCTAAG-TTCTGTG-CAGTATATACATACATA-GTT-TA-------------A---------A-AAATATTGCACACTTCTCAGACTACAAATGTGAACT----GT-CTGGTC-TT-------------CAAAA--------- |
| droWil1 | scaffold_180700:3453399-3453550 + | GAAGGAGTCAA-T--G----ACCACAA-----------------------ATTTTCAAACATTCTT-TGGAC-GGACTTGT-C--AAATATGTTTGGATAT-AAAATTC-------------AACAATTGGACAACATATTGATCAAAACCGGGCCAAAAATTGTTGGAA----AA-TTCTTC-AAAGTTGTTGGACTTGACAATTT------ |
| droVir3 | scaffold_12875:13668721-13668866 - | AAAACAATTTG-G--T----------AAATACTGCGCATAGCCTTGCGCCTTATGTAATCATTTTT-AGGCC-GTG-CTCTGTGTGAATATGTTT-------TTAACTA------------TA---------A-TCATATTGCACATCTCCCGGCCTATAAGTGTAGA-TGCATAA-TTCATC-AA-------------ATATAAAT------ |
| droMoj3 | scaffold_6496:9090283-9090389 - | TGT-----------------------------------------------------ATCCATTTTT-AGGCC-GTG-CTATGTGACAATATGTATTTAAATT-GTA-TT-------------T---------A-TCATATTGCACATCTCCCGGCCTACAAGTGTA-AATGCACAA-TTCAAC-T----------------ATGTAC------ |
| droGri2 | scaffold_15245:17564471-17564548 + | -----------------------------------------------------------------C-AGGAT-GGA-AGCTGTGACAATATGTAG-------GTTT-TAATTAATTTATATTT---------C-ATATATTGCACACCTCCCGGCCTATAAATG------------------------------------------------- |