dme-mir-307a
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr2R | 4140613 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0.688 | 0 | 0.313 | 16 | Genomic Error | 5' MOR |
Corrected Alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr2R:5508741-5508858 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC |
| droSim1 | chr2R:4140609-4140726 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGC |
| droSec1 | super_1:3126041-3126158 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGC |
| droYak2 | chr2L:18140631-18140748 - | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC |
| droEre2 | scaffold_4929:8848869-8848986 + | AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC |
| droAna3 | scaffold_13266:12795467-12795585 - | AAGTTAG--CAG-------CCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC |
| dp4 | chr3:14135687-14135806 - | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC |
| droPer1 | super_4:1183061-1183180 + | AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC |
| droWil1 | scaffold_180701:3433650-3433765 - | ---TTAA--CA--------CA-TTTTGCCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTATAATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGT |
| droVir3 | scaffold_12875:5789441-5789560 - | AAATAAACCGAA-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTAGTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAGC |
| droMoj3 | scaffold_6496:24271667-24271782 + | AAACTA----AG-------AA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTCGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC |
| droGri2 | scaffold_15112:722942-723066 - | AAAATAA--AAGAACTAAACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGAA |