dme-mir-2b-1

Corrected alignment:

dme-mir-2b-1

Species Coordinate Alignment
dm3 chr2L:8258601-8258707 - CAAAATA---------ACT---A--------------------AAAACTTC-AACTGTCTTCAA-----------------------------------------AGTGGCAGTGACATG-----------------------------TTGTCA-ACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCT----------CGT--------------CCGGC
droSim1 chr2L:8042700-8042806 - CAAAAGA---------ACT---G--------------------AAAACTTC-AACTGTCTTCAA-----------------------------------------AGTGGCGGTGACATG-----------------------------TTGTCA-ACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCA----------CGC--------------CCGAC
droSec1 super_3:3755253-3755359 - CAAAAGA---------ACT---G--------------------AAAACTTC-AACTGTCTTCAA-----------------------------------------AGTGGCGGTGACATG-----------------------------TTGTCA-ACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGTGGTTTTTCT----------CGC--------------CCGCC
droYak2 chr2L:10894231-10894336 - GGAAAA----------AGT---G--------------------AAAACTTC-AACTGTCTTCAA-----------------------------------------AGTGGCGGTGACATG-----------------------------TTGTCA-ACAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCT----------CGC--------------CAACC
droEre2 scaffold_4929:17167539-17167644 - CGCAATA----------GT---G--------------------AAAACTTC-AACTGTCTTCAA-----------------------------------------AGTGGCGGTGACATG-----------------------------TTGTCA-GCAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGTTTTTCT----------CGC--------------CCGCC
droAna3 scaffold_12916:6006043-6006142 + CAGATTT---------T-TTTAG--------------------GGAACTGC-GACCCTCCTTAA-----------------------------------------AGTGGCGGTGACATG-----------------------------TAGCTT-TC-ATATTCATATCACAGCTTTGCTTTCAGGAGCGTTGAGGTTTCTC---------------------------------
dp4 chr4_group3:3919027-3919154 + CCCATGGGATACT--ATAG---G--------------------AAAGCTGC-GACGCTCTTTAA-----------------------------------------AGTGGCGGTGACGTG-----------------------------TTGGTA-ATAATATTCATATCACAGCC-AGCTTTGAGGAGCGTTGCGGCCCTTCT----------GAAAATATGCGCCTCATTGGGG
droPer1 super_1:5401823-5401939 + CCCATGGGATACT--ATAG---G--------------------AATGCTGC-GACGCTCTTTAA-----------------------------------------AGTGGCGGTGACGTG-----------------------------TTGGTA-ATAATATTCATATCACAGCC-AGCTTTGA-GAGCGTTGCGGCCCTTCT----------GAA-ATAT---------GCGCC
droWil1 scaffold_180703:495398-495497 + TGTAAAT---------TAT---A--------------------GAATTTAT-GATAGATTTTTA-----------------------------------------ATCATGGTTT-----------------------GAGTCAAAATTAAACAA-AAATAGTTTAAATAAAAGCA-AATAT--AGTAATATTTTTGTT-----------------------------------TT
droVir3 Unknown --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:5445901-5446049 - TTAACTC---------C-C---G--------------------AAAGTAGGCTCTATTATCTAAAGTCGTACATTAAATTTTGTTTAGTATACCTAAATGAATTATATGAAAGTGAAATATTTCCTCAATATTGGCTCGA-----------ATCA-ATAGT----GTGTTGCGGTA-AACCTTAAAGAAAAATCTG-------------------------------------GAA
droGri2 scaffold_15252:13434449-13434542 - TTCAATA---------G-CAAGG--------------------AAATTCTT-GGTTTTCTTTTG-----------------------------------------TTTATCGGGAAAATG-----------------------------TTATAT-A-AACCTATATATCTTT----ATCTCT-----------AGATCTCTCA----------CTA--------------TTTGC