dme-mir-276b
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr3L | 9702906 | C | 3 | 0 | 0 | 0 | 0 | 0 | 0.773 | 0.227 | 0 | 0 | 22 | Genomic Error | 5' MOR |
Corrected Alignment:
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr3L:10312870-10312998 + | GACCATCGAAC--G----------------------AAAAAAACCGAAGTCTTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCCTATATTC----AGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCAGCA--TAT----A--G--TTA--------AAA |
| droSim1 | chr3L:9702897-9703022 + | GACCATCGAAC-------------------------GAAAAAACCGAAGTCTTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC--TATTC----AGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCATCA--TAT----A--G--TTG--------AAA |
| droSec1 | super_0:2526747-2526871 + | GACCAC-GAAC-------------------------GAAAAAACCGAAGTCTTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC--TATTC----AGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCATCA--TAT----A--G--TTG--------AAA |
| droYak2 | chr3L:10302128-10302256 + | GACAACAGAAAGAA----------------------CAAAAAACCGAAGTCTTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC--TATTC----AGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCATCA--TAA----A--G--TTA--------AAA |
| droEre2 | scaffold_4784:10306167-10306292 + | GACAACCGAAT-------------------------AAAAAAACCGAAGTCTTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCC--TATTC----AGTCGTAGGAACTTAATACCGTGCTCTTGGAGGACTGTCGACCATCA--TAA----A--G--TTG--------AAA |
| droAna3 | scaffold_13337:15233368-15233487 + | ATTTC-----T-------------------------GAAGAAACCGAAGCCTATTTGCCATCAGCGAGGTATAGAGTTCCTACGTGCC--ACTTAAACTAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCATCA--TGA---------------------AAG |
| dp4 | chrXR_group6:8706029-8706135 + | ATCTA------------------------------------AAGCGAAGCCTCTTTACCATCAGCGAGGTATAGAGTTCCTACGTGCCG-TATCC-AA-AGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCCATCAAC------------------------------ |
| droPer1 | super_27:1146104-1146210 + | ATCTA------------------------------------AAGCGAAGCCTCTTTACCATCAGCGAGGTATAGAGTTCCTACGTGCCG-TATCC-AA-AGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCCATCAAC------------------------------ |
| droWil1 | scaffold_181024:290398-290516 - | AACAAAT--TT-------------------------GAAATAAACGAAGCCTATTTACCATAAGCGAGGTATAGAGTTCCTACGTGCA--AATTGCAATAATCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGAACAACA--A-------------------------A |
| droVir3 | scaffold_13049:16093198-16093326 + | TATCTTAAGAT----------------------TT-AAAGATACCGAAGTCTATATACCATCAGCGAGGTATAGAGTTCCTACGTGCA--AATTGCAATAATCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAGCA--A---------G--AAA--------AGA |
| droMoj3 | scaffold_6680:20678203-20678343 - | GACCAAGTGAA--A-----------CAGAGATTGT-AAAGATAACGAAGTCTATATACCATCAGCGAGGTATAGAGTTCCTACGTGCA--AATTGCAATAGTCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAACA--AAA----C--G--AAT--------AAA |
| droGri2 | scaffold_15110:12572308-12572448 - | AAATCTCAAAA--C-------------------CG-AAAGATAACGAAGTCTATTTACCATTAGCGAGGTATAGAGTTCCTACGTGCA--AATTGCAATAATCGTAGGAACTTAATACCGTGCTCTTGGAGGGCTGTCGACCAGCA--TTGATCAAAACAATTA--------AGT |