ID:

sblock2216

 Coordinate:

chr2L:2765183-2765267 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.1 -11.0

Sense Strand Reads

CCCCCTCCCGAATCCGATAAGGCGCTCCAAAAAGGTTTGTGTAACCATTATCTCACACTCGCAAAATATGTAGGTACAGTGGATAATCTCTAAGGCGAATATTGTCTGTATCTTCTTAGGTGTCTGGGAGCGAGCCACAAGTGCTGAGTATAAGCCGACCACGGATGGGAGCACCGTGCTCCGCT
******************************************************************.....((((((((..((((.((........)).))))..))))))))......****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V127
G2		 GSM322543
male head #1
 V086
female body, aged
 GSM609217
MLDmD20c5		 GSM609222
ML-DmBG1-C1		 V073
mbn2 		SRR065806
Piwi-IP_squ_mut_ovaries
 V125
ML-DmD9		 V085
CME W2 wing disc		 SRR014271
Embryo_0-2hrs_rep1_w1118_0_2hr_Emb
 SRR317115
genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies
 GSM609238
embryo 14-24hr
 GSM628272
ago2[414] ovary total RNA
 V132
ML-DmD32 		V137
Male aged head
 V146
S1 cell		 V131
ML-DmD16-c3 		V140
Dessication_female_body
 SRR014274
Ovary_rep1_LK(fem)_x_Har(male)_F1
 V148
mbn2 		V091
fGS/OSS total  		 V126
CME L1 		SRR031697
Total small RNAs from dcr-2 heterozygous flies
 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 V037
Felix sample +mirtrons
 GSM286611
6-10h #2 (11)
 GSE24544
dcr-2[L811fsX] ovary total RNA
 V134
ML-DmD8 		V141
Heat_female_body
 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR298536
strain: vret148-60/TM6genotype/variation: Vret Heterozygote
 V074
S3		 SRR097865
Drosophila S2-NP cells
 V034
ML-DmD16c3 cell		 V036
ML-DmD20c5 cell		 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2
 V077
cold, female head
 V022
ML-DmD32 cell		 V008
S2-DRSC		 SRR317113
genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies
 GSM609225
ML-DmBG3-C2		 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1
 SRR014278
Ovary_rep1_w1118(fem)_x_Har(male)_F1
 SRR060648
A2_ovaries_FLAG-Aub
 SRR317117
genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies
 GSM609235
CMEL1		 GSM609250
ML-DmD32 cell		 V0632
wt ovary AGO1-IP, reseq
AGO1
 V0642
ago2 ovary, AGO1-IP, reseq
AGO1
 GSM609236
dcr-2[L811fsX], ovary, AGO1IP
AGO1
 GSM609237
ago2[414] ovary total RNA
 GSM609234
CS  male total RNA  
 V096
loqsKO/f00791 ovary
 GSE24545
CS ovary total RNA
 V128
S3 		V136
Male aged body
 V092
dcr-2[G31R] male total RNA  
 V032
S1 cell		 V142
Oxidation_female_body
 SRR031692
Total small RNAs from Oregon R
 SRR029633
total small RNAs from hen1 homozygous flies
 SRR351332
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)
 SRR014268
Embryo_0-2hrs_rep1_HAR_0_2hr_Emb
 SRR060650
A1_testes_total
 GSM628271
r2d2[1] ovary total RNA  
 GSM609227
CMEW1 Cl.8+ cell		 SRR298712
strain: bam(delta)86/bam(delta)86genotype/variation: Bam Mutant
 SRR317114
genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies
 V014
DTT 8h
 GSM343832
S2R+ cell		 SRR341117
transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation
 GSM609219
GM2 cell		 V079
Oxidation, female head
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 GSM379052
Aub Heterozygote
 GSM379054
Flam Heterozygote
 GSM272652
S2 -48 Biological Replicate #1
 GSM361908
s2-48 Biological Replicate #2
 GSM609242
s2+48 #2
 GSM272651
S2-48,+48, KC-48, +48 mix
 SRR001349
heterozygous_dcr-2_untreated
 SRR010956
Piwi IP in Ago3 heterozygotes
 SRR010958
Piwi IP in Ago3 trans-heterozygotes
 SRR014270
Embryo_0-2hrs_rep1_NA_0_2hr_Emb
 SRR014273
Ovary_rep1_Har_P
 SRR014276
Ovary_rep1_NA(fem)_x_Har(male)_F1
 SRR023400
total RNA extracted from P19 cells
 SRR060644
A2_ovaries_total
 SRR060646
yw67c23(2)_ovaries_total
 SRR298711
strain: egg1473/ Df(2R)Dll-Mpgenotype/variation: dSETDB1 Mutant
 SRR317110
genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies
 SRR317112
genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies
 SRR317116
genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies
 V006
r2d2 female: possibly heterozygous
 V012
Dcr2 male (Katsutomo, whole fly?)
 V023
Dcr2 female head
 GSM609248
ML-DmD9 cell		 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1
 GSM609233
r2d2[1], ovary, AGO1IP
AGO1
 V130
ML-DmBG3-c2 		V135
CME W2 (wing disc line)		 V138
Male cold body
 V139
Cold_female_body
 V147
1182-4H cell		 SRR031701
Total small RNAs from r2d2 heterozygous flies
 SRR029033
lacZ knockdown
 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 SRR031703
Total small RNAs from r2d2 homozygous flies
 V129
ML-DmBG1-c1		 SRR065151
Piwi bound piRNAs from tj GAL4 > RNAi-aub ovaries
 SRR097866
Drosophila S2-NP cells
 SRR097867
Drosophila S2-NP cells
 GSM609229
embryo 2-6hr
 GSM609232
r2d2[1] ovary total RNA  
 SRX247212
AGO1-IP from S2-R+, FLAG-HA-AGO2
AGO1
 GSM360262
0-2d pupae
 SRR029030
dcr-2 knockdown
 V078
Desiccation, female head
 GSM609223
male, one day
 GSM609224
female, one day
 GSM379064
Vasa Mutant
 GSM609240
IR+ 2-18hr
 SRR065802
Piwi-IP_zuc_mut_ovaries
 SRR029032
r2d2 knockdown
 SRR032093
ago1 knockdown
 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 SRR001339
WT_females_non-beta-eliminated
 GSM609231
ago2[414], ovary, AGO1IP
AGO1
 GSM385748
OSS_s6		 GSM360260
0-1d Pupae (w)
 SRR029029
dcr-1 knockdown
 V038
Felix sample S2 only
 SRR010952
Ago3 trans-heterozygotes, oxidized
 SRR010954
Aub trans-heterozygotes, oxidized
 SRR023402
total RNA extracted from NLS-P19 cells
 GSM399101
kc167 cell
..................................................................TATGTAGGTACAGTGGATAATCT................................................................................................ 23 0 1 33.00 33 3 0 0 1 0 0 0 0 0 0 0 2 1 2 1 0 2 0 1 1 0 1 0 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATGTAGGTACAGTGGATAATCT................................................................................................ 22 0 1 20.00 20 2 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ATCCGATAAGGGGCTCCA............................................................................................................................................................ 18 1 1 15.00 15 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AATATTGTCTGTATCTTCTTAG.................................................................. 22 0 1 15.00 15 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 2 0 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TATGTAGGTACAGTGGATAAT.................................................................................................. 21 0 1 13.00 13 2 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TATGTAGGTACAGTGGATAA................................................................................................... 20 0 1 8.00 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TATGTAGGTACAGTGGATAATC................................................................................................. 22 0 1 6.00 6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCCGACCACGAAGGAGAGCAC........... 21 3 2 5.50 11 0 0 0 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TGTCTGGGAGCGAGCCACAAGTGC......................................... 24 0 1 5.00 5 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CGAGCCACAAGTGCTGAGTATAAGCCGA........................... 28 0 1 5.00 5 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AATCCGATAAGGGGCTCCA............................................................................................................................................................ 19 1 1 4.00 4 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GACGACCACGAATGAGAGCAC........... 21 3 3 4.00 12 0 0 0 1 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AAATGCTGAGTATAGGTCG............................ 19 3 12 3.92 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GACGACCACGAAGGGGAGCAC........... 21 3 6 3.00 18 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TGTAGGTACAGTGGATAATCT................................................................................................ 21 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATGTAGGTACAGTGGATAAT.................................................................................................. 20 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATAAGCCGACCACGGATGGGAGCACCG......... 27 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AAGTGCTGAGTATAAGCCGACC......................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CCCGAATCCGATAAGGCGCTC.............................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AATATTGTCTGTATCTTCTT.................................................................... 20 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TATGTAGGTACAGTGGAT..................................................................................................... 18 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ATATGTAGGTACAGTGGAT..................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGCCGACCACGGACGGGT............... 18 2 3 1.33 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCCGACCACGCATGGGACCA............ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GGCAGCGAGCCAGAAGTGCT........................................ 20 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGCCGGCCACGGATGGGAGC............. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................ACAAGTGCTGAGTATAAGACGACA......................... 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATAAGGCGCTCCAAAAAGGT..................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AATATTGTCTGTATCTTCTTAGT................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TGTCTGGGAGCGAGCCACAAGTGCT........................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CCCCTCCCGAATCCGATAAGGCGC................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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................................................TGTCTCACACTCCCATAAT...................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CTGAGTACAAGCCGACTACCG..................... 21 3 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AGCGCGGATGGAAGCACCG......... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................TCTGGGGCGATTATTGTCT.............................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TAGGTCGACTACGGATGG................. 18 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATTATTTCACACTCGTAAGA....................................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CGAATCTGATCAGCCGCTC.............................................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCCGACCACGAAGGAGAGC............. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCGGAGTATCAGCTGACCA........................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TAAGGGTCGGGGAGCGAG................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AATGCTGAGTATAGGTCG............................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TCGCAAAAGAAGTAGGTAG............................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GGGAGAATCACTAAGGCG........................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GGTGTCGGGGTGCGAGGCA................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AGTCTGTAGGTACAGTGGAT..................................................................................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................GACCACGGAGGAGAGCACT.......... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AAGTCGATCAGGGATGGGAGC............. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................TATATTGCGACCACGGATG.................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CAGCCGACCACGGTCGGG................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CTTGGGGGTCTGGGAGCGG.................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GCAGTGGAGAATTTCTAAG........................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GCTGTCTTGGAGCGCGCC................................................. 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GTGTGTATCTTCCTACGTGTC............................................................. 21 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................GGACAGTATCTAAGGCGA....................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCCCCGGATGGGAACACC.......... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................GGTGTATGGGAGCCAGAC................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCAGACCCCGGACGGGAG.............. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCTCGGGGAGCGAGTCAC............................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................GTGGATAATCTGAAAGTCGA....................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGGGGAGGGCTTAGGCTATTCCGCGAGGTTTTTCCAAACACATTGGTAATAGAGTGTGAGCGTTTTATACATCCATGTCACCTATTAGAGATTCCGCTTATAACAGACATAGAAGAATCCACAGACCCTCGCTCGGTGTTCACGACTCATATTCGGCTGGTGCCTACCCTCGTGGCACGAGGCGA
******************************************************************.....((((((((..((((.((........)).))))..))))))))......****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V074
S3		 GSM609217
MLDmD20c5		 V079
Oxidation, female head
 GSM609222
ML-DmBG1-C1		 V0632
wt ovary AGO1-IP, reseq
AGO1		 V0642
ago2 ovary, AGO1-IP, reseq
AGO1		 SRX247213
FLAG-IP from S2-R+, FLAG-HA-AGO2
AGO2		 V036
ML-DmD20c5 cell		 SRR029608
total small RNAs from hen1 heterozygous flies
 SRR010959
Ago3 IP in heterozygotes
AGO3		 SRR341116
transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation
 GSM609227
CMEW1 Cl.8+ cell		 V0662
r2d2 ovary, AGO1-IP, reseq
AGO1		 V078
Desiccation, female head
 V073
mbn2 		SRR031692
Total small RNAs from Oregon R
 GSM628272
ago2[414] ovary total RNA
 V148
mbn2 		V086
female body, aged
 V085
CME W2 wing disc		 V012
Dcr2 male (Katsutomo, whole fly?)
 GSM609226
CMEW1 Cl.8+ cell		 V022
ML-DmD32 cell		 V092
dcr-2[G31R] male total RNA  
 SRR031701
Total small RNAs from r2d2 heterozygous flies
 GSM609234
CS  male total RNA  
 SRR001348
ago2_oxidized
 GSM609223
male, one day
 V131
ML-DmD16-c3 		GSM609250
ML-DmD32 cell		 GSM609230
CS,ovary,AGO1IP
AGO1		 SRR031704
2'-O-methylated small RNAs from r2d2 homozygous flies
 V008
S2-DRSC		 GSM343833
S2R+ cell		 SRR031702
2'-O-methylated small RNAs from r2d2 heterozygous flies
 SRR029633
total small RNAs from hen1 homozygous flies
 GSM609220
ML-DmD21 cell		 GSM180335
imaginal discs
 GSM467729
Dmel_wt_sRNAseq
 GSM467730
Dmel_r2d2_sRNAseq
 SRR031694
2'-O-methylated small RNAs from Oregon R
 SRR031697
Total small RNAs from dcr-2 heterozygous flies
 SRR317111
genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies
 GSM399101
kc167 cell		 GSM609232
r2d2[1] ovary total RNA  
 V126
CME L1 		V135
CME W2 (wing disc line)		 V077
cold, female head
 GSM609238
embryo 14-24hr
 V0652
dcr2 ovary, AGO1-IP, reseq
AGO1		 V080
Starvation, female head
 GSM371638
S2-NP		 V031
GM2 cell		 V128
S3 		V032
S1 cell		 GSM609251
aged female head
 SRR031703
Total small RNAs from r2d2 homozygous flies
 V034
ML-DmD16c3 cell		 GSM609237
ago2[414] ovary total RNA
 SRR029033
lacZ knockdown
 SRR097866
Drosophila S2-NP cells
 GSM609248
ML-DmD9 cell		 GSM609235
CMEL1		 GSE24545
CS ovary total RNA
 V129
ML-DmBG1-c1		 GSM628271
r2d2[1] ovary total RNA  
 V015
DreRFHV148h
 GSM399100
Kc167 cell		 SRR001339
WT_females_non-beta-eliminated
 SRR001349
heterozygous_dcr-2_untreated
 SRR023402
total RNA extracted from NLS-P19 cells
 SRR032152
Ago1-associated small RNAs from Oregon R
AGO1		 V091
fGS/OSS total  		 GSM609225
ML-DmBG3-C2		 GSM609229
embryo 2-6hr
 GSM609231
ago2[414], ovary, AGO1IP
AGO1		 SRR014282
Ovary_rep1_wK_P
 SRR065155
Piwi bound piRNAs from tj GAL4 > RNAi-fs(1)Yb ovaries
 SRR351333
age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]
 V093
loqs-KO, 40A; loqs-PB rescue/TM3  male total RNA
 SRR014272
Embryo_0-2hrs_rep1_wK_0_2hr_Emb
 SRR014275
Ovary_rep1_LK_P
 SRR029029
dcr-1 knockdown
 SRR029032
r2d2 knockdown
 SRR010954
Aub trans-heterozygotes, oxidized
 V003
dsDcr-1 (katsutomo RNA)
 GSM609218
Sg4		 SRR014279
Ovary_rep1_w1118(fem)_x_wK(male)_F1
 V144
OSC		 SRR065153
Piwi bound piRNAs from tj GAL4 > RNAi-armi ovaries
 GSM609224
female, one day
 SRR029031
loqs-ORF knockdown
 GSM609247
heat female head
 GSM343832
S2R+ cell		 GSM609233
r2d2[1], ovary, AGO1IP
AGO1		 SRR060652
hs-Penelope_testes_total
 GSM379057
Krimp Mutant
 GSM385822
OSS_s8		 GSM609219
GM2 cell		 V140
Dessication_female_body
 GSM280087
S2cell (AGO2IP)
AGO2		 SRR010953
Aub heterozygotes, oxidized
 SRR097867
Drosophila S2-NP cells
.........................................................................................................................................................CGGCTGGTGCTTCCTCTCGTG........... 21 3 2 13.00 26 3 7 0 2 0 0 0 2 0 0 0 3 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTGCTGGTGCTTACTCTCGTG........... 21 3 3 4.67 14 0 3 0 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTGCTGGTGCTTCCCCTCGTG........... 21 3 6 3.33 20 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GGAGGGCTTAGGCTATTCCGC................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCGAGGTGTTTCCAGACACAAT............................................................................................................................................. 22 3 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCGAAGTTTTTCCAGACACACT............................................................................................................................................. 22 3 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCGAGGTTTTTCCACCCACA............................................................................................................................................... 20 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCGAGGTTTTGCCACACACAAT............................................................................................................................................. 22 3 2 1.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CGCGTGGTTTCTCCAGACACA............................................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CTCATATTCGGCTATGGCCT.................... 20 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................TTGGTAAAAGGGTGTGAGGGT.......................................................................................................................... 21 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGGCTGGTGCTTCCTCTCG............. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GAAGTTTTTCCACACACAAT............................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ACGTCTCATGTTCGGCTTG......................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................GGTAATGGAGTGTGATGGT.......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GAGTGGGAGCGTTAAATAC................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CGATTCATATTTGGCAGG......................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CGGTGTGCACGATTCATTT................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GGGAGGGCGTAGGCAATG..................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AATAACAGACATATAAGA..................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GCACAGGCCTTCGCTCGG................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GTCGGCTAGTGCCGACCC................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTATGTCTCCTATTAGAG............................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................GAGTTTTTTCCACACACACT............................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CGAGGATTTTCGACACACA............................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CGAGGATTTTCCACCCACA............................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TCCAAGCACATTCATAAT....................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGCTGGTGCTTCCTCTCGT............ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCGTAGGTTTTCCAAACAC................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dm3 chr2L:2765133-2765317 - CCCCCTCCCGAATCCGATAAGGCGCTCCAAAAAGGTTTGTGTAACCA---TTATCTCACAC--------------TCGCAAAATATGTAGGTA-------CA------------------------------------------------------------------------------------------------------------------------GTGGATAATCTCTAAGGCGAATAT------------TGTCTGTA----TCTTCTTAGGTGTCTGGGAGCGAGCCACA---AGTGCTGA---GTATAAGCCGACCACGGAT---GGGAGCACCGTGCTCCGCT
droSim2 2l:2652576-2652760 - CCCCCTCCAGAATCCGATAAGGCGCTCCAAAAAGGTTTGTGTAACCA---TTACCTCACAC--------------TCGCCAAATATGAAGGTA-------CA------------------------------------------------------------------------------------------------------------------------GTGGAAAATCTCTAAGGCGAATAT------------TGTCTGTA----TCTTCCTAGGTGTCTGGGAGCGAGCCACA---AGTGCGGA---GTATAAGCCGACCACGGAT---GGGAGCACCGTGCTCCGCT
droSec2 scaffold_5:931104-931288 - CCCCCTCCCGAATCCGAAAAGGCGCTCCAAAAAGGTTTGTGTAACCA---TTTTCTCACAC--------------TCGCCAAATATGAAGGTA-------CA------------------------------------------------------------------------------------------------------------------------GTGGAAAATCTATAAGGCGAATAT------------TGTCTGTA----TCTTCGTAGGTGTCTGGGAACGAGACACA---AGTGCGGA---ATATAAGCCGACCACGGAT---GGGAGCACCGTGCTCCGCT
droYak3 2L:2760715-2760898 - CCCCCTCCCGAATCAGATAAGGCGCTCCAAAAAGGTTTGTATAATCA---TTATCTTACAT--------------TCAAATAATATGTAGGTA-------CA------------------------------------------------------------------------------------------------------------------------GTGGAAACTCTCTAAGCTGAACAT------------TTTCTATA----T-CTTCCAGGTGTCTGGGAGCGACCCACT---ACTGCGGA---GTATAAGCCGACCACTGAT---GGGAGCACCGTGCTCCGCT
droEre2 scaffold_4929:2817959-2818166 - CCCCCTCCCGAATCAGATAAGGCACTTCAAAAAGGTA----AAACCA---TAATCTCACAT--------------TTGCATAATATGTAGGTACATGGAA-----------------------------------------------------AAAC--------------------------------------GATCATCA---------GTAGGTCACAGTGGAAACTCTCTAAGACGAATGT------------GGTCTATA----TCTTCCTAGGTGTCTGGGAGCGACCCGCT---AGTGCTGA---ATACAAGCCGACCACAGAT---GGCAGCACCGTGCTCCACT
droEug1 scf7180000409554:3345989-3346280 + CCACCGCCGGAATCAGATAAGGCGCTACAAAAGGGTTTGTATAATCA---TAATTTCCCATGACTATATTTCAATGCCCCTATTGTGGGGCTT-------CAGTACACATCTTCAAGAATCATTTAATATTCACATTGGGATGCAGATTAT-CATAT--------------------------------------AATCATCACCTTAGTGTGTAAAGGACAATGAAAGCTTCCAAAA-AAA--ATTTTTTATTTAAGTTTTTCCA----TCTTTTTAGGTGTCTGGGAGCGGCCAACAATGAGTTCCGA---GTACAAGCCGCCCACCGAT---GGTAGCACCGTGCTTCGTT
droBia1 scf7180000302188:1767936-1768127 - CCCGCACCCGAATCCGATAAGGCGCTCCAAAAGGGTTTGTATAAG----GTCTAAGGACAT--------------TG---------------------GCC-----------------------------------------GT---TATT-AACCATAT------AAAAC--------------------------------------------------TATAAAAATTACATAACTTAAATAT------------ACTTATTT----CCTGTTTAGGTTTCTGGGAGCGACCCACAACCAGTGCCGA---GTACAAGCCGCCCACCGAT---GGGAGCACGGTGCTCCGTT
droTak1 scf7180000415705:514025-514131 - TAT---------------------------------------------------------------------------------------GTA-------TA------------------------------------------------------------------------------------------------------------------------GCAAATAATATATA----------------------TTTTTGTA----C-CTTTTAGGTTTCTGGGAGCGACCAACGTCTAGCGCCGA---GTACAAGCCGCCCACCGAT---GGGAGCACAGTGCTCCGAT
droEle1 scf7180000491273:412313-412388 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTAGGTGTCTGGGAGCGACCCACGTCTAATGCCGA---CTTCAAGCCGCCCACCGAT---GGGAGCACAGTGCTCCGCT
droRho1 scf7180000766156:59171-59263 + TATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTTTCAAAACTTGTAGATGTCTGGGCGCGACCCACAACAAATGCCGA---GTACAAGCCGCCCACCGAT---GGGAGCACCGTGCTGCGTT
droFic1 scf7180000453924:716565-716762 - CCCCCGCCAGAATCTGATAAGGCGCTCCAAAGGGGTATGTACATATG---G----AT-------------------------------------------------------------------------------------G--AG---TA------TACTTTTTAAAATTAAAAAATATATAAATTGGTTTATGAATATCA--------------TCTCAA----------------TAAATAC------------TTTTTGA-----ACTTTTTAGGTGTCTGGGAGCGACCCACAACGAATTCCGA---GTATAAGCCGCCCACCGAT---GGGAGCACCGTGCTCCGCT
droKik1 scf7180000302271:228073-228157 - TAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----TATTTATAGGAGTCTGGGAGCGACCCTCATCGAGTACCGAAACCTTTAAACCACTCACCGAT---GGCAGCACCGTCCTCCGCT
droAna3 scaffold_12984:244347-244458 - TAC--------------------------------------------------------------------------------------------------A----------------------------------------GTGGG---AA------CG--------------------------------------------------------------------AGTCTTAAAAATGAAAA--------------------A----TATTTTCAGGCATCTGGGAGCGACCAGCACAGACGGCCACTTCTTATCAGGCACCTAAAGAT---GGGAGCACCGTGCTCAGGT
droBip1 scf7180000396574:369611-369692 - ATACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGTATCTGGGAGCGACCAGCACAGACGGCCGCTTCTTATCAGGGGCCTAAAGAT---GGGAGCACTGTGCTGCGTT
dp5 4_group4:2108153-2108315 - CCGTCGCAAGTAACAGATAGGACACTTCAAAAAGGTTTGAC----GCTAATTGGTGCACAC--------------TA---------------------AGCA----------------------------------------GTGGG---TC------CG-GT--------------------------------------------------------------------CTG----ACAAATGA------------AGT---------TTTCCGCAGGTTTCTGGGAGCGCCCCACATCGTCCACCAC---GTATGAGCCACCCAGCGAA---GGA---ACTGTGCTGCGGT
droPer2 scaffold_10:1114814-1114976 - CCGTCGCAAGTAACAGATAGGACACTTCAAAAAGGTTTGAC----GCTAATTGGTGCACAC--------------TA---------------------AGCA----------------------------------------GTGGG---TC------CG-GT--------------------------------------------------------------------CTG----ACAAATGA------------AGT---------TTTCCGCAGGTTTCTGGGAGCGCCCCACATCGTCCACCAC---GTATGAGCCACCCAGCGAA---GGA---ACTGTGCTGCGGT
droWil2 scf2_1100000004585:1542148-1542247 - CCACAACAAACTGCGGATAAGGCCATTCAGAAGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGGGAACGACCAGCC------ACAAA---ATATCAACCACCTCCAGATGATGGTTCCACTGTGCTCCGAT
droVir3 scaffold_12963:11387611-11387777 - CCGGATCAGACTGCAGACCGGACGGCTCAGAAAGGTGCGTATGCTAG---ATACCAG-------------------------------------------AA----------------------------------------GCAGA---TC------AA-GT-----T-----------------------------------------------------TGCTCAC----------TTTACAT------------TTTATGT-----CCGCAACAGCTTTCTGGGAGAGTTTTAATCCAGTTAAAAG---ATTTCGACCCACTGCCGAT---GGCAGCATGGAGCTGCGCT
droMoj3 scaffold_6500:20137547-20137722 - CCTTCACAGGGTGTTGACCCGACGGGTCAGAAAGGTGAGCTAATTGG---A----ATCCAA--------------AG---------------------TGCA----------------------------------------GT---TTTT-TATATTAT-AT-----A-----------------------------------------------------TACATACATATAT----------A------------TATATGTA----T-ATTTAAGCGTTCTGGGAGAGCTACAATTCAGCTAAAAA---GTTTCGTCCCACTGCTGAC---GGCAGCTCGGAATTACGCT
droGri2 scaffold_15126:5047898-5047938 - TAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTACGCCTACTGCCGAT---GAGAGCACTGAGCTGCGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCCCCTCCAGAATCCGATAAGGCGCTCCAAAAAGGTTTGTGTAACCA---TTACCTCACAC--------------TCGCCAAATATGAAGGTA-------CA------------------------------------------------------------------------------------------------------------------------GTGGAAAATCTCTAAGGCGAATAT------------TGTCTGTA----TCTTCCTAGGTGTCTGGGAGCGAGCCACA---AGTGCGGA---GTATAAGCCGACCACGGAT---GGGAGCACCGTGCTCCGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis
..............................................................................................................................................................................................................................................................................................................................AGCCGACCACGGAT---GGGAGCACCGTGCT.....2811.00100000000000100
droSec2
CCCCCTCCCGAATCCGAAAAGGCGCTCCAAAAAGGTTTGTGTAACCA---TTTTCTCACAC--------------TCGCCAAATATGAAGGTA-------CA------------------------------------------------------------------------------------------------------------------------GTGGAAAATCTATAAGGCGAATAT------------TGTCTGTA----TCTTCGTAGGTGTCTGGGAACGAGACACA---AGTGCGGA---ATATAAGCCGACCACGGAT---GGGAGCACCGTGCTCCGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................AGGTGTCTGGGAACGAGA...........................................................1811.0010010
..........................................................................................................................................................................................................................................................................................TCTGGGAACGAGACACA---AGTGC...............................................2211.0010100
...........................................................................................................................................................................................................................................................................................CTGGGAACGAGACACA---AGTGC...............................................2111.0010001
...............................................................................................................................................................................................................................................................................................................................GCCGACCACGGAT---GGGAGCACC..........2211.0010010
.......................................................................................................................................................................................................................................................................................................CACA---AGTGCGGA---ATATAAGCCGA..............................2311.0010010
..............CGAAAAGGCGCTCCAAAAAGGT..............................................................................................................................................................................................................................................................................................................................2211.0010100
......................................................................................................................................................................................................................................................................................................................................ACGGAT---GGGAGCACCGTGCTC....2111.0010010
...............................................................................................................................................................................................................................................CGAATAT------------TGTCTGTA----TCTTC...............................................................................2011.0011000
droYak3
CCCCCTCCCGAATCAGATAAGGCGCTCCAAAAAGGTTTGTATAATCA---TTATCTTACAT--------------TCAAATAATATGTAGGTA-------CA------------------------------------------------------------------------------------------------------------------------GTGGAAACTCTCTAAGCTGAACAT------------TTTCTATA----T-CTTCCAGGTGTCTGGGAGCGACCCACT---ACTGCGGA---GTATAAGCCGACCACTGAT---GGGAGCACCGTGCTCCGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body
No Reads
droEre2
CCCCCTCCCGAATCAGATAAGGCACTTCAAAAAGGTA----AAACCA---TAATCTCACAT--------------TTGCATAATATGTAGGTACATGGAA-----------------------------------------------------AAAC--------------------------------------GATCATCA---------GTAGGTCACAGTGGAAACTCTCTAAGACGAATGT------------GGTCTATA----TCTTCCTAGGTGTCTGGGAGCGACCCGCT---AGTGCTGA---ATACAAGCCGACCACAGAT---GGCAGCACCGTGCTCCACTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head
.......................................................................................................................................................................................................................................................................................................................................CAGAT---GGCAGCACCGTGCTCCACT2411.001100000
droEug1
CCACCGCCGGAATCAGATAAGGCGCTACAAAAGGGTTTGTATAATCA---TAATTTCCCATGACTATATTTCAATGCCCCTATTGTGGGGCTT-------CAGTACACATCTTCAAGAATCATTTAATATTCACATTGGGATGCAGATTAT-CATAT--------------------------------------AATCATCACCTTAGTGTGTAAAGGACAATGAAAGCTTCCAAAA-AAA--ATTTTTTATTTAAGTTTTTCCA----TCTTTTTAGGTGTCTGGGAGCGGCCAACAATGAGTTCCGA---GTACAAGCCGCCCACCGAT---GGTAGCACCGTGCTTCGTTSizeHit CountTotal NormTotal
No Reads
droBia1
CCCGCACCCGAATCCGATAAGGCGCTCCAAAAGGGTTTGTATAAG----GTCTAAGGACAT--------------TG---------------------GCC-----------------------------------------GT---TATT-AACCATAT------AAAAC--------------------------------------------------TATAAAAATTACATAACTTAAATAT------------ACTTATTT----CCTGTTTAGGTTTCTGGGAGCGACCCACAACCAGTGCCGA---GTACAAGCCGCCCACCGAT---GGGAGCACGGTGCTCCGTTSizeHit CountTotal NormTotal
No Reads
droTak1
TAT---------------------------------------------------------------------------------------GTA-------TA------------------------------------------------------------------------------------------------------------------------GCAAATAATATATA----------------------TTTTTGTA----C-CTTTTAGGTTTCTGGGAGCGACCAACGTCTAGCGCCGA---GTACAAGCCGCCCACCGAT---GGGAGCACAGTGCTCCGATSizeHit CountTotal NormTotal
No Reads
droEle1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTAGGTGTCTGGGAGCGACCCACGTCTAATGCCGA---CTTCAAGCCGCCCACCGAT---GGGAGCACAGTGCTCCGCTSizeHit CountTotal NormTotal
No Reads
droRho1
TATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGTTTCAAAACTTGTAGATGTCTGGGCGCGACCCACAACAAATGCCGA---GTACAAGCCGCCCACCGAT---GGGAGCACCGTGCTGCGTTSizeHit CountTotal NormTotal
No Reads
droFic1
CCCCCGCCAGAATCTGATAAGGCGCTCCAAAGGGGTATGTACATATG---G----AT-------------------------------------------------------------------------------------G--AG---TA------TACTTTTTAAAATTAAAAAATATATAAATTGGTTTATGAATATCA--------------TCTCAA----------------TAAATAC------------TTTTTGA-----ACTTTTTAGGTGTCTGGGAGCGACCCACAACGAATTCCGA---GTATAAGCCGCCCACCGAT---GGGAGCACCGTGCTCCGCTSizeHit CountTotal NormTotal
No Reads
droKik1
TAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----TATTTATAGGAGTCTGGGAGCGACCCTCATCGAGTACCGAAACCTTTAAACCACTCACCGAT---GGCAGCACCGTCCTCCGCTSizeHit CountTotal NormTotal
No Reads
droAna3
TAC--------------------------------------------------------------------------------------------------A----------------------------------------GTGGG---AA------CG--------------------------------------------------------------------AGTCTTAAAAATGAAAA--------------------A----TATTTTCAGGCATCTGGGAGCGACCAGCACAGACGGCCACTTCTTATCAGGCACCTAAAGAT---GGGAGCACCGTGCTCAGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGTATCTGGGAGCGACCAGCACAGACGGCCGCTTCTTATCAGGGGCCTAAAGAT---GGGAGCACTGTGCTGCGTTSizeHit CountTotal NormTotal
No Reads
dp5
CCGTCGCAAGTAACAGATAGGACACTTCAAAAAGGTTTGAC----GCTAATTGGTGCACAC--------------TA---------------------AGCA----------------------------------------GTGGG---TC------CG-GT--------------------------------------------------------------------CTG----ACAAATGA------------AGT---------TTTCCGCAGGTTTCTGGGAGCGCCCCACATCGTCCACCAC---GTATGAGCCACCCAGCGAA---GGA---ACTGTGCTGCGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................CCAGCGAA---GGA---ACTGTGCTGCG..2211.0010100000000
droPer2
CCGTCGCAAGTAACAGATAGGACACTTCAAAAAGGTTTGAC----GCTAATTGGTGCACAC--------------TA---------------------AGCA----------------------------------------GTGGG---TC------CG-GT--------------------------------------------------------------------CTG----ACAAATGA------------AGT---------TTTCCGCAGGTTTCTGGGAGCGCCCCACATCGTCCACCAC---GTATGAGCCACCCAGCGAA---GGA---ACTGTGCTGCGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....GCAAGTAACAGATAGGACACTTCAA....................................................................................................................................................................................................................................................................................................................................2511.001010000
droWil2
CCACAACAAACTGCGGATAAGGCCATTCAGAAGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGGGAACGACCAGCC------ACAAA---ATATCAACCACCTCCAGATGATGGTTCCACTGTGCTCCGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............GATAAGGCCATTCAGAAGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTGG...................................................................2711.00100100
...CAACAAACTGCGGATAAGGC...........................................................................................................................................................................................................................................................................................................................................2011.00110000
droVir3
CCGGATCAGACTGCAGACCGGACGGCTCAGAAAGGTGCGTATGCTAG---ATACCAG-------------------------------------------AA----------------------------------------GCAGA---TC------AA-GT-----T-----------------------------------------------------TGCTCAC----------TTTACAT------------TTTATGT-----CCGCAACAGCTTTCTGGGAGAGTTTTAATCCAGTTAAAAG---ATTTCGACCCACTGCCGAT---GGCAGCATGGAGCTGCGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
....ATCAGACTGCAGACCGGACGGCT.......................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................ATTTCGACCCACTGCCGAT---GGC................2211.00100100000000000000000000000000000000000000000000000000000000000
......CAGACTGCAGACCGGACGGCT.......................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000000000000000000000000000000000000000000000000
.......AGACTGCAGACCGGACGGCTC......................................................................................................................................................................................................................................................................................................................................2111.00100000000000000000000100000000000000000000000000000000000000000
....ATCAGACTGCAGACCGGAC...........................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000000000000000000000000000000000000000000000000
....ATCAGACTGCAGACCGGACGGCTCAGA...................................................................................................................................................................................................................................................................................................................................2711.00100000000000000000000000000000000010000000000000000000000000000
.CGGATCAGACTGCAGACCGGG............................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000000000000000000000000000000000000000000000000
..................CGGACGGCTCAGAAAG................................................................................................................................................................................................................................................................................................................................1611.00100000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................ATCCAGTTAAAAG---ATTTCGACCCACTGC..........................2811.00100100000000000000000000000000000000000000000000000000000000000
droMoj3
CCTTCACAGGGTGTTGACCCGACGGGTCAGAAAGGTGAGCTAATTGG---A----ATCCAA--------------AG---------------------TGCA----------------------------------------GT---TTTT-TATATTAT-AT-----A-----------------------------------------------------TACATACATATAT----------A------------TATATGTA----T-ATTTAAGCGTTCTGGGAGAGCTACAATTCAGCTAAAAA---GTTTCGTCCCACTGCTGAC---GGCAGCTCGGAATTACGCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................AAAAA---GTTTCGTCCCACTGCT.........................2111.001000001
droGri2
TAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTACGCCTACTGCCGAT---GAGAGCACTGAGCTGCGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 10/13/2014 at 06:06 PM