This archive contains BED files with genomic regions filtered from our dempgraphic analysis.
Additionally, we masked out CpG sites and clustered SNPs in the individual genomes
** All filters are in coordinates of hg18 (Genome build 36)

Mappability filters:
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filter_rmsk20.bed             - RepeatMasker filter (using threshold of 20% divergence from the reference)
filter_segDups.bed            - Segmental Duplications filter
filter_simpleRepeat.bed       - Simple Repeat filter

Others:
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filter_netSyntenyPanTro2.bed  - regions with low synteny with the chimpanzee genome (panTro2)	
filter_hotSpot.bed            - regions predicted to be recombination hotspots
filter_selection.bed          - regions within 1 kb of genes (CDS, UTRs, RNA genes) or 100 bp from conserved elements (44-way placental mammals phastCons elements)